PMC:7347402 / 6540-7774
Annnotations
LitCovid_Glycan-Motif-Structure
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T8 | 409-416 | https://glytoucan.org/Structures/Glycans/G15021LG | denotes | glucose |
| T9 | 488-495 | https://glytoucan.org/Structures/Glycans/G15021LG | denotes | glucose |
| T10 | 555-562 | https://glytoucan.org/Structures/Glycans/G15021LG | denotes | glucose |
| T11 | 634-641 | https://glytoucan.org/Structures/Glycans/G15021LG | denotes | glucose |
| T12 | 930-937 | https://glytoucan.org/Structures/Glycans/G15021LG | denotes | glucose |
| T13 | 1008-1015 | https://glytoucan.org/Structures/Glycans/G15021LG | denotes | glucose |
| T14 | 1074-1081 | https://glytoucan.org/Structures/Glycans/G15021LG | denotes | glucose |
| T15 | 1156-1163 | https://glytoucan.org/Structures/Glycans/G15021LG | denotes | glucose |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T18 | 403-408 | Body_part | denotes | blood | http://purl.org/sig/ont/fma/fma9670 |
| T19 | 409-416 | Body_part | denotes | glucose | http://purl.org/sig/ont/fma/fma82743 |
| T20 | 482-487 | Body_part | denotes | blood | http://purl.org/sig/ont/fma/fma9670 |
| T21 | 488-495 | Body_part | denotes | glucose | http://purl.org/sig/ont/fma/fma82743 |
| T22 | 549-554 | Body_part | denotes | blood | http://purl.org/sig/ont/fma/fma9670 |
| T23 | 555-562 | Body_part | denotes | glucose | http://purl.org/sig/ont/fma/fma82743 |
| T24 | 628-633 | Body_part | denotes | blood | http://purl.org/sig/ont/fma/fma9670 |
| T25 | 634-641 | Body_part | denotes | glucose | http://purl.org/sig/ont/fma/fma82743 |
| T26 | 924-929 | Body_part | denotes | blood | http://purl.org/sig/ont/fma/fma9670 |
| T27 | 930-937 | Body_part | denotes | glucose | http://purl.org/sig/ont/fma/fma82743 |
| T28 | 1002-1007 | Body_part | denotes | blood | http://purl.org/sig/ont/fma/fma9670 |
| T29 | 1008-1015 | Body_part | denotes | glucose | http://purl.org/sig/ont/fma/fma82743 |
| T30 | 1068-1073 | Body_part | denotes | blood | http://purl.org/sig/ont/fma/fma9670 |
| T31 | 1074-1081 | Body_part | denotes | glucose | http://purl.org/sig/ont/fma/fma82743 |
| T32 | 1150-1155 | Body_part | denotes | blood | http://purl.org/sig/ont/fma/fma9670 |
| T33 | 1156-1163 | Body_part | denotes | glucose | http://purl.org/sig/ont/fma/fma82743 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T11 | 403-408 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
| T12 | 482-487 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
| T13 | 549-554 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
| T14 | 628-633 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
| T15 | 924-929 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
| T16 | 1002-1007 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
| T17 | 1068-1073 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
| T18 | 1150-1155 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 224 | 841-848 | Species | denotes | patient | Tax:9606 |
| 225 | 909-917 | Species | denotes | patients | Tax:9606 |
| 226 | 977-985 | Species | denotes | patients | Tax:9606 |
| 227 | 1041-1049 | Species | denotes | patients | Tax:9606 |
| 228 | 1123-1131 | Species | denotes | patients | Tax:9606 |
| 229 | 930-937 | Chemical | denotes | glucose | MESH:D005947 |
| 230 | 1008-1015 | Chemical | denotes | glucose | MESH:D005947 |
| 231 | 1074-1081 | Chemical | denotes | glucose | MESH:D005947 |
| 232 | 1156-1163 | Chemical | denotes | glucose | MESH:D005947 |
| 233 | 1218-1226 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 249 | 35-43 | Species | denotes | patients | Tax:9606 |
| 250 | 96-104 | Species | denotes | patients | Tax:9606 |
| 251 | 388-396 | Species | denotes | patients | Tax:9606 |
| 252 | 457-465 | Species | denotes | patients | Tax:9606 |
| 253 | 522-530 | Species | denotes | patients | Tax:9606 |
| 254 | 601-609 | Species | denotes | patients | Tax:9606 |
| 255 | 705-712 | Species | denotes | patient | Tax:9606 |
| 256 | 777-784 | Species | denotes | patient | Tax:9606 |
| 257 | 409-416 | Chemical | denotes | glucose | MESH:D005947 |
| 258 | 488-495 | Chemical | denotes | glucose | MESH:D005947 |
| 259 | 555-562 | Chemical | denotes | glucose | MESH:D005947 |
| 260 | 634-641 | Chemical | denotes | glucose | MESH:D005947 |
| 261 | 26-34 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 262 | 696-704 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 263 | 747-755 | Disease | denotes | diabetes | MESH:D003920 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T64 | 26-34 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T65 | 696-704 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T66 | 747-755 | Disease | denotes | diabetes | http://purl.obolibrary.org/obo/MONDO_0005015 |
| T67 | 1218-1226 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T43 | 0-1 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T44 | 385-386 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T45 | 401-402 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T46 | 403-408 | http://purl.obolibrary.org/obo/UBERON_0000178 | denotes | blood |
| T47 | 403-408 | http://www.ebi.ac.uk/efo/EFO_0000296 | denotes | blood |
| T48 | 454-455 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | b |
| T49 | 471-477 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | tested |
| T50 | 482-487 | http://purl.obolibrary.org/obo/UBERON_0000178 | denotes | blood |
| T51 | 482-487 | http://www.ebi.ac.uk/efo/EFO_0000296 | denotes | blood |
| T52 | 540-541 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T53 | 549-554 | http://purl.obolibrary.org/obo/UBERON_0000178 | denotes | blood |
| T54 | 549-554 | http://www.ebi.ac.uk/efo/EFO_0000296 | denotes | blood |
| T55 | 563-567 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | test |
| T56 | 581-587 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | tested |
| T57 | 626-627 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T58 | 628-633 | http://purl.obolibrary.org/obo/UBERON_0000178 | denotes | blood |
| T59 | 628-633 | http://www.ebi.ac.uk/efo/EFO_0000296 | denotes | blood |
| T60 | 642-646 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | test |
| T61 | 922-923 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T62 | 924-929 | http://purl.obolibrary.org/obo/UBERON_0000178 | denotes | blood |
| T63 | 924-929 | http://www.ebi.ac.uk/efo/EFO_0000296 | denotes | blood |
| T64 | 991-997 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | tested |
| T65 | 1002-1007 | http://purl.obolibrary.org/obo/UBERON_0000178 | denotes | blood |
| T66 | 1002-1007 | http://www.ebi.ac.uk/efo/EFO_0000296 | denotes | blood |
| T67 | 1059-1060 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T68 | 1068-1073 | http://purl.obolibrary.org/obo/UBERON_0000178 | denotes | blood |
| T69 | 1068-1073 | http://www.ebi.ac.uk/efo/EFO_0000296 | denotes | blood |
| T70 | 1082-1086 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | test |
| T71 | 1100-1106 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | tested |
| T72 | 1148-1149 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T73 | 1150-1155 | http://purl.obolibrary.org/obo/UBERON_0000178 | denotes | blood |
| T74 | 1150-1155 | http://www.ebi.ac.uk/efo/EFO_0000296 | denotes | blood |
| T75 | 1164-1168 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | test |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T19 | 409-416 | Chemical | denotes | glucose | http://purl.obolibrary.org/obo/CHEBI_17234|http://purl.obolibrary.org/obo/CHEBI_4167 |
| T21 | 488-495 | Chemical | denotes | glucose | http://purl.obolibrary.org/obo/CHEBI_17234|http://purl.obolibrary.org/obo/CHEBI_4167 |
| T23 | 555-562 | Chemical | denotes | glucose | http://purl.obolibrary.org/obo/CHEBI_17234|http://purl.obolibrary.org/obo/CHEBI_4167 |
| T25 | 634-641 | Chemical | denotes | glucose | http://purl.obolibrary.org/obo/CHEBI_17234|http://purl.obolibrary.org/obo/CHEBI_4167 |
| T27 | 930-937 | Chemical | denotes | glucose | http://purl.obolibrary.org/obo/CHEBI_17234|http://purl.obolibrary.org/obo/CHEBI_4167 |
| T29 | 1008-1015 | Chemical | denotes | glucose | http://purl.obolibrary.org/obo/CHEBI_17234|http://purl.obolibrary.org/obo/CHEBI_4167 |
| T31 | 1074-1081 | Chemical | denotes | glucose | http://purl.obolibrary.org/obo/CHEBI_17234|http://purl.obolibrary.org/obo/CHEBI_4167 |
| T33 | 1156-1163 | Chemical | denotes | glucose | http://purl.obolibrary.org/obo/CHEBI_17234|http://purl.obolibrary.org/obo/CHEBI_4167 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T44 | 0-81 | Sentence | denotes | A total of 1258 confirmed COVID-19 patients were admitted into the two hospitals. |
| T45 | 82-756 | Sentence | denotes | Of these, 653 patients were ruled out for one of the following reasons: (1) no definitive 28-day outcome since they were transferred to another hospital; (2) missing key clinical information (e.g. demographic or clinical data); (3) no FBG data available at admission (for one of the following reasons: [a] patients had a blood glucose measurement taken before admission; [b] patients were tested for blood glucose 24 h after admission; [c] patients received a random blood glucose test but were not tested for FBG; [d] patients did not receive a blood glucose test since this was not routinely conducted for every COVID-19 patient); (4) having previously diagnosed diabetes. |
| T46 | 757-817 | Sentence | denotes | The flow diagram of patient selection is detailed in Fig. 1. |
| T47 | 818-905 | Sentence | denotes | Fig. 1 Flow diagram of patient selection. aReasons for no FBG measurement at admission: |
| T48 | 906-1234 | Sentence | denotes | 13 patients had a blood glucose measurement taken before admission; 25 patients were tested for blood glucose 24 h after admission; 84 patients received a random blood glucose test but were not tested for FBG; and 81 patients did not receive a blood glucose test since this was not routinely conducted for every COVID-19 patient |
LitCovid-PMC-OGER-BB
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T69 | 26-34 | SP_7 | denotes | COVID-19 |
| T70 | 403-408 | UBERON:0000178 | denotes | blood |
| T71 | 409-416 | CHEBI:17234;CHEBI:17234 | denotes | glucose |
| T72 | 482-487 | UBERON:0000178 | denotes | blood |
| T73 | 488-495 | CHEBI:17234;CHEBI:17234 | denotes | glucose |
| T74 | 549-554 | UBERON:0000178 | denotes | blood |
| T75 | 555-562 | CHEBI:17234;CHEBI:17234 | denotes | glucose |
| T76 | 628-633 | UBERON:0000178 | denotes | blood |
| T77 | 634-641 | CHEBI:17234;CHEBI:17234 | denotes | glucose |
| T78 | 696-704 | SP_7 | denotes | COVID-19 |
| T79 | 924-929 | UBERON:0000178 | denotes | blood |
| T80 | 930-937 | CHEBI:17234;CHEBI:17234 | denotes | glucose |
| T81 | 1002-1007 | UBERON:0000178 | denotes | blood |
| T82 | 1008-1015 | CHEBI:17234;CHEBI:17234 | denotes | glucose |
| T83 | 1068-1073 | UBERON:0000178 | denotes | blood |
| T84 | 1074-1081 | CHEBI:17234;CHEBI:17234 | denotes | glucose |
| T85 | 1150-1155 | UBERON:0000178 | denotes | blood |
| T86 | 1156-1163 | CHEBI:17234;CHEBI:17234 | denotes | glucose |
| T87 | 1218-1226 | SP_7 | denotes | COVID-19 |
| T73422 | 26-34 | SP_7 | denotes | COVID-19 |
| T46011 | 403-408 | UBERON:0000178 | denotes | blood |
| T83616 | 409-416 | CHEBI:17234;CHEBI:17234 | denotes | glucose |
| T62265 | 482-487 | UBERON:0000178 | denotes | blood |
| T64007 | 488-495 | CHEBI:17234;CHEBI:17234 | denotes | glucose |
| T9041 | 549-554 | UBERON:0000178 | denotes | blood |
| T10763 | 555-562 | CHEBI:17234;CHEBI:17234 | denotes | glucose |
| T63627 | 628-633 | UBERON:0000178 | denotes | blood |
| T94008 | 634-641 | CHEBI:17234;CHEBI:17234 | denotes | glucose |
| T82411 | 696-704 | SP_7 | denotes | COVID-19 |
| T83140 | 924-929 | UBERON:0000178 | denotes | blood |
| T91204 | 930-937 | CHEBI:17234;CHEBI:17234 | denotes | glucose |
| T25782 | 1002-1007 | UBERON:0000178 | denotes | blood |
| T21325 | 1008-1015 | CHEBI:17234;CHEBI:17234 | denotes | glucose |
| T32471 | 1068-1073 | UBERON:0000178 | denotes | blood |
| T58204 | 1074-1081 | CHEBI:17234;CHEBI:17234 | denotes | glucose |
| T47883 | 1150-1155 | UBERON:0000178 | denotes | blood |
| T88273 | 1156-1163 | CHEBI:17234;CHEBI:17234 | denotes | glucose |
| T14620 | 1218-1226 | SP_7 | denotes | COVID-19 |