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PMC:7347402 / 19261-20807 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T68 853-857 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T69 921-926 Body_part denotes heart http://purl.org/sig/ont/fma/fma7088
T70 990-995 Body_part denotes liver http://purl.org/sig/ont/fma/fma7197
T71 1059-1065 Body_part denotes kidney http://purl.org/sig/ont/fma/fma7203

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T45 853-857 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T46 921-926 Body_part denotes heart http://purl.obolibrary.org/obo/UBERON_0000948
T47 990-995 Body_part denotes liver http://purl.obolibrary.org/obo/UBERON_0002107
T48 1059-1065 Body_part denotes kidney http://purl.obolibrary.org/obo/UBERON_0002113

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
509 359-375 Gene denotes Female 1 (ref) 1 Gene:7980
510 1248-1282 Gene denotes CRB-65 score 0 1 (ref) 1 (ref) 1–2 Gene:7980
511 1412-1426 Gene denotes <6.1 1 (ref) 1 Gene:7980
512 293-296 Gene denotes Age Gene:5973
513 443-458 Disease denotes symptoms  Fever MESH:D051271
514 500-505 Disease denotes Cough MESH:D003371
515 661-668 Disease denotes Fatigue MESH:D005221
516 710-719 Disease denotes Diarrhoea MESH:D003967
517 785-797 Disease denotes Hypertension MESH:D006973
518 845-865 Disease denotes Chronic lung disease MESH:D055370
519 913-934 Disease denotes Chronic heart disease MESH:D006331
520 982-1003 Disease denotes Chronic liver disease MESH:D058625
521 1051-1073 Disease denotes Chronic kidney disease MESH:D051436
522 1121-1144 Disease denotes Cerebrovascular disease MESH:D002561
523 1192-1201 Disease denotes Carcinoma MESH:D009369
525 73-78 Disease denotes death MESH:D003643

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T168 710-719 Disease denotes Diarrhoea http://purl.obolibrary.org/obo/MONDO_0001673
T169 785-797 Disease denotes Hypertension http://purl.obolibrary.org/obo/MONDO_0005044
T170 853-865 Disease denotes lung disease http://purl.obolibrary.org/obo/MONDO_0005275
T171 921-934 Disease denotes heart disease http://purl.obolibrary.org/obo/MONDO_0005267
T172 990-1003 Disease denotes liver disease http://purl.obolibrary.org/obo/MONDO_0005154
T173 1051-1073 Disease denotes Chronic kidney disease http://purl.obolibrary.org/obo/MONDO_0005300
T174 1059-1073 Disease denotes kidney disease http://purl.obolibrary.org/obo/MONDO_0001343|http://purl.obolibrary.org/obo/MONDO_0005240
T176 1121-1144 Disease denotes Cerebrovascular disease http://purl.obolibrary.org/obo/MONDO_0011057
T177 1192-1201 Disease denotes Carcinoma http://purl.obolibrary.org/obo/MONDO_0004993
T178 1248-1251 Disease denotes CRB http://purl.obolibrary.org/obo/MONDO_0008764

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T201 359-365 http://purl.obolibrary.org/obo/UBERON_0003100 denotes Female
T202 382-386 http://purl.obolibrary.org/obo/UBERON_0003101 denotes Male
T203 382-386 http://www.ebi.ac.uk/efo/EFO_0000970 denotes Male
T204 853-857 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T205 853-857 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T206 921-926 http://purl.obolibrary.org/obo/UBERON_0000948 denotes heart
T207 921-926 http://purl.obolibrary.org/obo/UBERON_0007100 denotes heart
T208 921-926 http://purl.obolibrary.org/obo/UBERON_0015228 denotes heart
T209 921-926 http://www.ebi.ac.uk/efo/EFO_0000815 denotes heart
T210 990-995 http://purl.obolibrary.org/obo/UBERON_0002107 denotes liver
T211 990-995 http://www.ebi.ac.uk/efo/EFO_0000887 denotes liver
T212 1059-1065 http://purl.obolibrary.org/obo/UBERON_0002113 denotes kidney
T213 1059-1065 http://www.ebi.ac.uk/efo/EFO_0000927 denotes kidney
T214 1059-1065 http://www.ebi.ac.uk/efo/EFO_0000929 denotes kidney
T215 1333-1336 http://purl.obolibrary.org/obo/CLO_0001302 denotes 3–4

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T57 453-458 Phenotype denotes Fever http://purl.obolibrary.org/obo/HP_0001945
T58 500-505 Phenotype denotes Cough http://purl.obolibrary.org/obo/HP_0012735
T59 661-668 Phenotype denotes Fatigue http://purl.obolibrary.org/obo/HP_0012378
T60 710-719 Phenotype denotes Diarrhoea http://purl.obolibrary.org/obo/HP_0002014
T61 785-797 Phenotype denotes Hypertension http://purl.obolibrary.org/obo/HP_0000822
T62 845-865 Phenotype denotes Chronic lung disease http://purl.obolibrary.org/obo/HP_0006528
T63 990-1003 Phenotype denotes liver disease http://purl.obolibrary.org/obo/HP_0001392
T64 1051-1073 Phenotype denotes Chronic kidney disease http://purl.obolibrary.org/obo/HP_0012622
T65 1192-1201 Phenotype denotes Carcinoma http://purl.obolibrary.org/obo/HP_0030731

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T161 0-113 Sentence denotes Table 2 Univariable and multivariable analyses of various indicators for death within 28 days in all participants
T162 114-197 Sentence denotes Univariable analysis HR (95% CI) p value Multivariable analysis HR (95% CI) p value
T163 198-206 Sentence denotes Hospital
T164 207-240 Sentence denotes  Wuhan Red Cross Hospital 1 (ref)
T165 241-292 Sentence denotes  Wuhan Union West Hospital 0.85 (0.57, 1.28) 0.4347
T166 293-354 Sentence denotes Age, years 1.05 (1.03, 1.06) <0.0001 1.02 (1.00, 1.04) 0.0252
T167 355-381 Sentence denotes Sex Female 1 (ref) 1 (ref)
T168 382-436 Sentence denotes Male 2.03 (1.37, 3.01) 0.0004 1.75 (1.17, 2.60) 0.0060
T169 437-451 Sentence denotes Onset symptoms
T170 452-469 Sentence denotes  Fever No 1 (ref)
T171 470-498 Sentence denotes Yes 0.84 (0.48, 1.44) 0.5191
T172 499-516 Sentence denotes  Cough No 1 (ref)
T173 517-545 Sentence denotes Yes 0.71 (0.47, 1.08) 0.1125
T174 546-571 Sentence denotes  Expectoration No 1 (ref)
T175 572-600 Sentence denotes Yes 1.06 (0.71, 1.58) 0.7788
T176 601-630 Sentence denotes  Muscular soreness No 1 (ref)
T177 631-659 Sentence denotes Yes 0.92 (0.57, 1.47) 0.7256
T178 660-679 Sentence denotes  Fatigue No 1 (ref)
T179 680-708 Sentence denotes Yes 1.07 (0.72, 1.60) 0.7386
T180 709-730 Sentence denotes  Diarrhoea No 1 (ref)
T181 731-759 Sentence denotes Yes 0.83 (0.48, 1.44) 0.5124
T182 760-783 Sentence denotes Past history of disease
T183 784-813 Sentence denotes  Hypertension Without 1 (ref)
T184 814-843 Sentence denotes With 1.27 (0.85, 1.89) 0.2493
T185 844-881 Sentence denotes  Chronic lung disease Without 1 (ref)
T186 882-911 Sentence denotes With 1.12 (0.41, 3.03) 0.8285
T187 912-950 Sentence denotes  Chronic heart disease Without 1 (ref)
T188 951-980 Sentence denotes With 1.34 (0.75, 2.39) 0.3151
T189 981-1019 Sentence denotes  Chronic liver disease Without 1 (ref)
T190 1020-1049 Sentence denotes With 0.95 (0.30, 2.99) 0.9296
T191 1050-1089 Sentence denotes  Chronic kidney disease Without 1 (ref)
T192 1090-1119 Sentence denotes With 2.28 (1.00, 5.19) 0.0496
T193 1120-1160 Sentence denotes  Cerebrovascular disease Without 1 (ref)
T194 1161-1190 Sentence denotes With 2.82 (1.31, 6.05) 0.0080
T195 1191-1217 Sentence denotes  Carcinoma Without 1 (ref)
T196 1218-1247 Sentence denotes With 1.81 (0.92, 3.58) 0.0876
T197 1248-1278 Sentence denotes CRB-65 score 0 1 (ref) 1 (ref)
T198 1279-1332 Sentence denotes 1–2 4.35 (2.81, 6.72) <0.0001 2.68 (1.56–4.59) 0.0003
T199 1333-1389 Sentence denotes 3–4 13.80 (5.99, 31.80) <0.0001 5.25 (2.05–13.43) 0.0005
T200 1390-1432 Sentence denotes Admission FBG, mmol/l <6.1 1 (ref) 1 (ref)
T201 1433-1490 Sentence denotes 6.1–6.9 2.06 (1.20, 3.54) 0.0087 1.71 (0.99, 2.94) 0.0524
T202 1491-1546 Sentence denotes ≥7.0 3.54 (2.33, 5.38) <0.0001 2.30 (1.49, 3.55) 0.0002

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T41258 853-857 UBERON:0002048 denotes lung
T89570 921-926 UBERON:0000948 denotes heart
T34811 990-995 UBERON:0002107 denotes liver
T25028 1059-1065 UBERON:0002113 denotes kidney
T1863 1121-1136 UBERON:0002037 denotes Cerebrovascular