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PMC:7346000 / 38815-39514 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T108 6-11 Body_part denotes serum http://purl.org/sig/ont/fma/fma63083
T109 390-394 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T110 421-425 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T111 426-430 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T73 6-11 Body_part denotes serum http://purl.obolibrary.org/obo/UBERON_0001977
T74 390-394 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T75 426-430 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
1472 78-81 Chemical denotes VCZ MESH:D065819
1473 139-143 Disease denotes ARDS MESH:D012128
1474 145-180 Disease denotes acute respiratory distress syndrome MESH:D012128
1475 278-282 Disease denotes COPD MESH:D029424
1476 284-321 Disease denotes chronic obstructive pulmonary disease MESH:D029424
1477 370-402 Disease denotes chronic obstructive lung disease MESH:D029424
1478 404-409 Disease denotes NSCLC MESH:D002289
1479 426-437 Disease denotes lung cancer MESH:D008175

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T340 139-143 Disease denotes ARDS http://purl.obolibrary.org/obo/MONDO_0006502
T341 145-180 Disease denotes acute respiratory distress syndrome http://purl.obolibrary.org/obo/MONDO_0006502
T342 151-180 Disease denotes respiratory distress syndrome http://purl.obolibrary.org/obo/MONDO_0009971
T343 278-282 Disease denotes COPD http://purl.obolibrary.org/obo/MONDO_0005002
T344 284-321 Disease denotes chronic obstructive pulmonary disease http://purl.obolibrary.org/obo/MONDO_0005002
T345 304-321 Disease denotes pulmonary disease http://purl.obolibrary.org/obo/MONDO_0005275
T346 370-402 Disease denotes chronic obstructive lung disease http://purl.obolibrary.org/obo/MONDO_0005002
T347 378-402 Disease denotes obstructive lung disease http://purl.obolibrary.org/obo/MONDO_0002267
T348 390-402 Disease denotes lung disease http://purl.obolibrary.org/obo/MONDO_0005275
T349 404-409 Disease denotes NSCLC http://purl.obolibrary.org/obo/MONDO_0005233
T350 411-437 Disease denotes non-small-cell lung cancer http://purl.obolibrary.org/obo/MONDO_0005233
T351 426-437 Disease denotes lung cancer http://purl.obolibrary.org/obo/MONDO_0008903
T352 431-437 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T306 390-394 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T307 390-394 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T308 421-425 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T309 426-430 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T310 426-430 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T311 505-511 http://purl.obolibrary.org/obo/OBI_0000968 denotes device
T312 627-632 http://purl.obolibrary.org/obo/NCBITaxon_9940 denotes L-AmB
T313 657-658 http://purl.obolibrary.org/obo/CLO_0001021 denotes B

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T309 78-81 Chemical denotes VCZ http://purl.obolibrary.org/obo/CHEBI_10023
T310 182-184 Chemical denotes NA http://purl.obolibrary.org/obo/CHEBI_33696
T311 202-204 Chemical denotes ND http://purl.obolibrary.org/obo/CHEBI_73419
T312 263-276 Chemical denotes beta-D-Glucan http://purl.obolibrary.org/obo/CHEBI_28793
T313 263-267 Chemical denotes beta http://purl.obolibrary.org/obo/CHEBI_10545
T314 270-276 Chemical denotes Glucan http://purl.obolibrary.org/obo/CHEBI_37163
T315 323-325 Chemical denotes GM http://purl.obolibrary.org/obo/CHEBI_74120
T316 327-340 Chemical denotes galactomannan http://purl.obolibrary.org/obo/CHEBI_27680
T317 342-346 Chemical denotes GOLD http://purl.obolibrary.org/obo/CHEBI_59965
T318 472-477 Chemical denotes radio http://purl.obolibrary.org/obo/CHEBI_33325
T319 487-490 Chemical denotes LFD http://purl.obolibrary.org/obo/CHEBI_73571
T320 547-550 Chemical denotes VCZ http://purl.obolibrary.org/obo/CHEBI_10023
T321 552-564 Chemical denotes voriconazole http://purl.obolibrary.org/obo/CHEBI_10023
T322 571-584 Chemical denotes isavuconazole http://purl.obolibrary.org/obo/CHEBI_85979
T323 593-604 Chemical denotes caspofungin http://purl.obolibrary.org/obo/CHEBI_474180
T324 612-625 Chemical denotes anidulafungin http://purl.obolibrary.org/obo/CHEBI_55346
T325 644-658 Chemical denotes amphotericin B http://purl.obolibrary.org/obo/CHEBI_2682
T326 665-677 Chemical denotes itraconazole http://purl.obolibrary.org/obo/CHEBI_6076
T327 686-698 Chemical denotes posaconazole http://purl.obolibrary.org/obo/CHEBI_64355

LitCovid-PD-GlycoEpitope

Id Subject Object Predicate Lexical cue glyco_epitope_db_id
T64 323-325 GlycoEpitope denotes GM http://www.glycoepitope.jp/epitopes/EP0510
T65 327-340 GlycoEpitope denotes galactomannan http://www.glycoepitope.jp/epitopes/EP0510

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T121 151-171 Phenotype denotes respiratory distress http://purl.obolibrary.org/obo/HP_0002098
T122 278-282 Phenotype denotes COPD http://purl.obolibrary.org/obo/HP_0006510
T123 284-321 Phenotype denotes chronic obstructive pulmonary disease http://purl.obolibrary.org/obo/HP_0006510
T124 378-402 Phenotype denotes obstructive lung disease http://purl.obolibrary.org/obo/HP_0006536
T125 404-409 Phenotype denotes NSCLC http://purl.obolibrary.org/obo/HP_0030358
T126 411-437 Phenotype denotes non-small-cell lung cancer http://purl.obolibrary.org/obo/HP_0030358

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T210 0-138 Sentence denotes * All serum qPCR remained negative. # All dosages are standard dosages (e.g., VCZ 6 mg/kg bid Day 1, and 4 mg/kg bid starting Day 2) [64].
T211 139-699 Sentence denotes ARDS: acute respiratory distress syndrome; NA: not applicable; ND: not determined; BALF: bronchoalveolar lavage fluid; BDG: beta-D-Glucan; COPD: chronic obstructive pulmonary disease; GM; galactomannan; GOLD: global initiative for chronic obstructive lung disease; NSCLC: non-small-cell lung cancer; ODI: optical density index; RTx: radio therapy; LFD: lateral flow device; qPCR: quantitative real-time PCR; VCZ: voriconazole; ISA: isavuconazole; CASPO: caspofungin; ANID: anidulafungin; L-AmB: liposomal amphotericin B; ICZ: itraconazole; POSA = posaconazole.