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PMC:7346000 / 1718-2646 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T1 775-779 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 775-779 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
64 190-211 Species denotes Aspergillus fumigatus Tax:746128
65 287-293 Species denotes humans Tax:9606
66 864-872 Species denotes patients Tax:9606
67 70-81 Species denotes Aspergillus Tax:746128
68 154-165 Species denotes Aspergillus Tax:746128
69 556-567 Species denotes Aspergillus Tax:746128
70 0-26 Disease denotes Invasive fungal infections MESH:D000072742
71 273-283 Disease denotes infections MESH:D007239
72 305-337 Disease denotes invasive pulmonary aspergillosis MESH:D055744
73 353-376 Disease denotes pulmonary aspergillosis MESH:D055732
74 384-423 Disease denotes allergic bronchopulmonary aspergillosis MESH:D001229
75 432-454 Disease denotes chronic rhinosinusitis MESH:D002908
76 456-469 Disease denotes fungal asthma MESH:D001249
77 475-497 Disease denotes Aspergillus bronchitis MESH:D001991
78 593-602 Disease denotes mortality MESH:D003643
79 775-786 Disease denotes lung damage MESH:D008171
80 878-916 Disease denotes chronic obstructive pulmonary diseases MESH:D029424
81 918-922 Disease denotes COPD MESH:D029424

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T22 9-26 Disease denotes fungal infections http://purl.obolibrary.org/obo/MONDO_0002041
T23 273-286 Disease denotes infections in http://purl.obolibrary.org/obo/MONDO_0005550
T24 324-337 Disease denotes aspergillosis http://purl.obolibrary.org/obo/MONDO_0005657
T25 363-376 Disease denotes aspergillosis http://purl.obolibrary.org/obo/MONDO_0005657
T26 384-423 Disease denotes allergic bronchopulmonary aspergillosis http://purl.obolibrary.org/obo/MONDO_0015243
T27 384-392 Disease denotes allergic http://purl.obolibrary.org/obo/MONDO_0004980
T28 410-423 Disease denotes aspergillosis http://purl.obolibrary.org/obo/MONDO_0005657
T29 425-429 Disease denotes ABPA http://purl.obolibrary.org/obo/MONDO_0015243
T30 432-454 Disease denotes chronic rhinosinusitis http://purl.obolibrary.org/obo/MONDO_0006031
T31 463-469 Disease denotes asthma http://purl.obolibrary.org/obo/MONDO_0004979
T32 487-497 Disease denotes bronchitis http://purl.obolibrary.org/obo/MONDO_0003781
T33 878-916 Disease denotes chronic obstructive pulmonary diseases http://purl.obolibrary.org/obo/MONDO_0005002
T34 898-916 Disease denotes pulmonary diseases http://purl.obolibrary.org/obo/MONDO_0005275
T35 918-922 Disease denotes COPD http://purl.obolibrary.org/obo/MONDO_0005002

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T9 257-258 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T10 287-293 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T11 378-381 http://purl.obolibrary.org/obo/CLO_0002599 denotes CPA
T12 616-617 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T13 775-779 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T14 775-779 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T11 339-342 Chemical denotes IPA http://purl.obolibrary.org/obo/CHEBI_17824|http://purl.obolibrary.org/obo/CHEBI_30802
T13 505-508 Chemical denotes IPA http://purl.obolibrary.org/obo/CHEBI_17824|http://purl.obolibrary.org/obo/CHEBI_30802
T15 808-823 Chemical denotes corticosteroids http://purl.obolibrary.org/obo/CHEBI_50858

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T2 0-26 Phenotype denotes Invasive fungal infections http://purl.obolibrary.org/obo/HP_0020101
T3 305-337 Phenotype denotes invasive pulmonary aspergillosis http://purl.obolibrary.org/obo/HP_0020103
T4 339-342 Phenotype denotes IPA http://purl.obolibrary.org/obo/HP_0020103
T5 463-469 Phenotype denotes asthma http://purl.obolibrary.org/obo/HP_0002099
T6 487-497 Phenotype denotes bronchitis http://purl.obolibrary.org/obo/HP_0012387
T7 505-508 Phenotype denotes IPA http://purl.obolibrary.org/obo/HP_0020103
T8 878-916 Phenotype denotes chronic obstructive pulmonary diseases http://purl.obolibrary.org/obo/HP_0006510
T9 918-922 Phenotype denotes COPD http://purl.obolibrary.org/obo/HP_0006510

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T12 0-153 Sentence denotes Invasive fungal infections caused by various fungal genera, including Aspergillus, complicate and endanger lives of millions of individuals annually [1].
T13 154-504 Sentence denotes Aspergillus genera, most frequently Aspergillus fumigatus, are ubiquitous in the environment and cause a wide range of infections in humans, including invasive pulmonary aspergillosis (IPA), chronic pulmonary aspergillosis (CPA), allergic bronchopulmonary aspergillosis (ABPA), chronic rhinosinusitis, fungal asthma, and Aspergillus bronchitis [2,3].
T14 505-928 Sentence denotes IPA, the most severe manifestation of disease from Aspergillus, is associated with high mortality rates and is a prominent complication among those with profound immunosuppression, such as those undergoing hematopoietic transplantation, as well as those with structural lung damage who receive systemic corticosteroids for their underlying condition, such as patients with chronic obstructive pulmonary diseases (COPD) [2].

2_test

Id Subject Object Predicate Lexical cue
32599813-23253612-60095058 150-151 23253612 denotes 1
32599813-25354514-60095059 499-500 25354514 denotes 2
32599813-31296304-60095060 501-502 31296304 denotes 3
32599813-25354514-60095061 925-926 25354514 denotes 2