PMC:7344504 / 8153-9126
Annnotations
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T20 | 690-694 | Body_part | denotes | gene | http://purl.org/sig/ont/fma/fma74402 |
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id | tao:has_standard_notation |
---|---|---|---|---|---|---|
224 | 221-228 | Species | denotes | patient | Tax:9606 | |
225 | 286-298 | Species | denotes | A. fumigatus | Tax:746128 | |
226 | 422-434 | Species | denotes | A. fumigatus | Tax:746128 | |
227 | 841-848 | Species | denotes | patient | Tax:9606 | |
228 | 311-323 | Chemical | denotes | itraconazole | MESH:D017964 | |
229 | 328-340 | Chemical | denotes | voriconazole | MESH:D065819 | |
230 | 460-474 | Chemical | denotes | amphotericin B | MESH:D000666 | |
231 | 485-498 | Chemical | denotes | anidulafungin | MESH:D000077612 | |
232 | 503-513 | Chemical | denotes | micafungin | MESH:D000077551 | |
233 | 527-539 | Chemical | denotes | itraconazole | MESH:D017964 | |
234 | 549-561 | Chemical | denotes | voriconazole | MESH:D065819 | |
235 | 573-585 | Chemical | denotes | posaconazole | MESH:C101425 | |
236 | 596-608 | Chemical | denotes | Voriconazole | MESH:D065819 | |
237 | 644-658 | Chemical | denotes | amphotericin B | MESH:D000666 | |
238 | 777-782 | Chemical | denotes | azole | MESH:D001393 | |
239 | 724-728 | Mutation | denotes | L98H | p.L98H |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T53 | 232-233 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T54 | 286-287 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
T55 | 422-423 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
T56 | 473-474 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | B |
T57 | 657-658 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | B |
T58 | 690-694 | http://purl.obolibrary.org/obo/OGG_0000000002 | denotes | gene |
T59 | 717-718 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T60 | 802-804 | http://purl.obolibrary.org/obo/CLO_0050507 | denotes | 22 |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T62 | 311-323 | Chemical | denotes | itraconazole | http://purl.obolibrary.org/obo/CHEBI_6076 |
T63 | 328-340 | Chemical | denotes | voriconazole | http://purl.obolibrary.org/obo/CHEBI_10023 |
T64 | 460-474 | Chemical | denotes | amphotericin B | http://purl.obolibrary.org/obo/CHEBI_2682 |
T65 | 485-498 | Chemical | denotes | anidulafungin | http://purl.obolibrary.org/obo/CHEBI_55346 |
T66 | 503-513 | Chemical | denotes | micafungin | http://purl.obolibrary.org/obo/CHEBI_600520 |
T67 | 527-539 | Chemical | denotes | itraconazole | http://purl.obolibrary.org/obo/CHEBI_6076 |
T68 | 549-561 | Chemical | denotes | voriconazole | http://purl.obolibrary.org/obo/CHEBI_10023 |
T69 | 573-585 | Chemical | denotes | posaconazole | http://purl.obolibrary.org/obo/CHEBI_64355 |
T70 | 644-658 | Chemical | denotes | amphotericin B | http://purl.obolibrary.org/obo/CHEBI_2682 |
T71 | 777-782 | Chemical | denotes | azole | http://purl.obolibrary.org/obo/CHEBI_68452 |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T70 | 0-104 | Sentence | denotes | The respiratory situation improved marginally in the subsequent 7 days but declined steadily thereafter. |
T71 | 105-271 | Sentence | denotes | Pressure support and pressure control ventilation were alternated between days 12 and 19 and attempts to return the patient to a supine position failed several times. |
T72 | 272-408 | Sentence | denotes | After 7 days, A. fumigatus grew on the itraconazole and voriconazole wells of the second VIPcheck on day 19 (tracheal aspirate culture). |
T73 | 409-595 | Sentence | denotes | MICs of this A. fumigatus isolate were as follows: amphotericin B 0.5 mg/L, anidulafungin and micafungin <0.016 mg/L, itraconazole 16 mg/L, voriconazole 2 mg/L and posaconazole 0.5 mg/L. |
T74 | 596-671 | Sentence | denotes | Voriconazole treatment was changed to liposomal amphotericin B 200 mg q24h. |
T75 | 672-794 | Sentence | denotes | Subsequent cyp51A gene sequencing identified a TR34/L98H mutation, probably responsible for the observed azole resistance. |
T76 | 795-943 | Sentence | denotes | On day 22, ventilation and oxygenation of the patient deteriorated further without further treatment options and therapy was discontinued on day 23. |
T77 | 944-973 | Sentence | denotes | An autopsy was not performed. |