PMC:7341831 / 4212-4729
Annnotations
LitCovid-PD-FMA-UBERON
{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T9","span":{"begin":99,"end":106},"obj":"Body_part"},{"id":"T10","span":{"begin":214,"end":224},"obj":"Body_part"},{"id":"T11","span":{"begin":235,"end":244},"obj":"Body_part"},{"id":"T12","span":{"begin":257,"end":267},"obj":"Body_part"},{"id":"T13","span":{"begin":361,"end":366},"obj":"Body_part"},{"id":"T14","span":{"begin":425,"end":441},"obj":"Body_part"},{"id":"T15","span":{"begin":469,"end":474},"obj":"Body_part"}],"attributes":[{"id":"A9","pred":"fma_id","subj":"T9","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A10","pred":"fma_id","subj":"T10","obj":"http://purl.org/sig/ont/fma/fma62852"},{"id":"A11","pred":"fma_id","subj":"T11","obj":"http://purl.org/sig/ont/fma/fma62851"},{"id":"A12","pred":"fma_id","subj":"T12","obj":"http://purl.org/sig/ont/fma/fma62293"},{"id":"A13","pred":"fma_id","subj":"T13","obj":"http://purl.org/sig/ont/fma/fma9576"},{"id":"A14","pred":"fma_id","subj":"T14","obj":"http://purl.org/sig/ont/fma/fma7337"},{"id":"A15","pred":"fma_id","subj":"T15","obj":"http://purl.org/sig/ont/fma/fma9670"}],"text":"Laboratory parameters showed increased urea (360.7 mg/dL), creatinine (8.46 mg/dL), and C-reactive protein (12 mg/L). Normal values were seen for potassium and sodium (5.24 mmol/L; and 136.8 mmol/L, respectively). Leukocytes 6,530/µL, platelets 285x109/µL, hemoglobin 11.2 g/dL, hematocrit 34.5%, neutrophilia (84%), and lymphopenia (12,8%) were also observed. Chest x-rays showed infiltrate and nodular consolidation in the right lower lobe. No CT scan was performed. Blood culture was negative for bacterial growth."}
LitCovid-PD-UBERON
{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T8","span":{"begin":361,"end":366},"obj":"Body_part"},{"id":"T9","span":{"begin":437,"end":441},"obj":"Body_part"},{"id":"T10","span":{"begin":469,"end":474},"obj":"Body_part"}],"attributes":[{"id":"A8","pred":"uberon_id","subj":"T8","obj":"http://purl.obolibrary.org/obo/UBERON_0001443"},{"id":"A9","pred":"uberon_id","subj":"T9","obj":"http://purl.obolibrary.org/obo/UBERON_3010752"},{"id":"A10","pred":"uberon_id","subj":"T10","obj":"http://purl.obolibrary.org/obo/UBERON_0000178"}],"text":"Laboratory parameters showed increased urea (360.7 mg/dL), creatinine (8.46 mg/dL), and C-reactive protein (12 mg/L). Normal values were seen for potassium and sodium (5.24 mmol/L; and 136.8 mmol/L, respectively). Leukocytes 6,530/µL, platelets 285x109/µL, hemoglobin 11.2 g/dL, hematocrit 34.5%, neutrophilia (84%), and lymphopenia (12,8%) were also observed. Chest x-rays showed infiltrate and nodular consolidation in the right lower lobe. No CT scan was performed. Blood culture was negative for bacterial growth."}
LitCovid-PubTator
{"project":"LitCovid-PubTator","denotations":[{"id":"139","span":{"begin":88,"end":106},"obj":"Gene"},{"id":"140","span":{"begin":39,"end":43},"obj":"Chemical"},{"id":"141","span":{"begin":59,"end":69},"obj":"Chemical"},{"id":"142","span":{"begin":146,"end":155},"obj":"Chemical"},{"id":"143","span":{"begin":160,"end":166},"obj":"Chemical"},{"id":"144","span":{"begin":297,"end":309},"obj":"Disease"},{"id":"145","span":{"begin":321,"end":332},"obj":"Disease"}],"attributes":[{"id":"A139","pred":"tao:has_database_id","subj":"139","obj":"Gene:1401"},{"id":"A140","pred":"tao:has_database_id","subj":"140","obj":"MESH:D014508"},{"id":"A141","pred":"tao:has_database_id","subj":"141","obj":"MESH:D003404"},{"id":"A142","pred":"tao:has_database_id","subj":"142","obj":"MESH:D011188"},{"id":"A143","pred":"tao:has_database_id","subj":"143","obj":"MESH:D012964"},{"id":"A144","pred":"tao:has_database_id","subj":"144","obj":"MESH:C563010"},{"id":"A145","pred":"tao:has_database_id","subj":"145","obj":"MESH:D008231"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"Laboratory parameters showed increased urea (360.7 mg/dL), creatinine (8.46 mg/dL), and C-reactive protein (12 mg/L). Normal values were seen for potassium and sodium (5.24 mmol/L; and 136.8 mmol/L, respectively). Leukocytes 6,530/µL, platelets 285x109/µL, hemoglobin 11.2 g/dL, hematocrit 34.5%, neutrophilia (84%), and lymphopenia (12,8%) were also observed. Chest x-rays showed infiltrate and nodular consolidation in the right lower lobe. No CT scan was performed. Blood culture was negative for bacterial growth."}
LitCovid-PD-MONDO
{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T48","span":{"begin":321,"end":332},"obj":"Disease"}],"attributes":[{"id":"A48","pred":"mondo_id","subj":"T48","obj":"http://purl.obolibrary.org/obo/MONDO_0003783"}],"text":"Laboratory parameters showed increased urea (360.7 mg/dL), creatinine (8.46 mg/dL), and C-reactive protein (12 mg/L). Normal values were seen for potassium and sodium (5.24 mmol/L; and 136.8 mmol/L, respectively). Leukocytes 6,530/µL, platelets 285x109/µL, hemoglobin 11.2 g/dL, hematocrit 34.5%, neutrophilia (84%), and lymphopenia (12,8%) were also observed. Chest x-rays showed infiltrate and nodular consolidation in the right lower lobe. No CT scan was performed. Blood culture was negative for bacterial growth."}
LitCovid-PD-CLO
{"project":"LitCovid-PD-CLO","denotations":[{"id":"T30","span":{"begin":361,"end":366},"obj":"http://www.ebi.ac.uk/efo/EFO_0000965"},{"id":"T31","span":{"begin":469,"end":474},"obj":"http://purl.obolibrary.org/obo/UBERON_0000178"},{"id":"T32","span":{"begin":469,"end":474},"obj":"http://www.ebi.ac.uk/efo/EFO_0000296"}],"text":"Laboratory parameters showed increased urea (360.7 mg/dL), creatinine (8.46 mg/dL), and C-reactive protein (12 mg/L). Normal values were seen for potassium and sodium (5.24 mmol/L; and 136.8 mmol/L, respectively). Leukocytes 6,530/µL, platelets 285x109/µL, hemoglobin 11.2 g/dL, hematocrit 34.5%, neutrophilia (84%), and lymphopenia (12,8%) were also observed. Chest x-rays showed infiltrate and nodular consolidation in the right lower lobe. No CT scan was performed. Blood culture was negative for bacterial growth."}
LitCovid-PD-CHEBI
{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T46","span":{"begin":39,"end":43},"obj":"Chemical"},{"id":"T47","span":{"begin":59,"end":69},"obj":"Chemical"},{"id":"T48","span":{"begin":99,"end":106},"obj":"Chemical"},{"id":"T49","span":{"begin":146,"end":155},"obj":"Chemical"},{"id":"T50","span":{"begin":160,"end":166},"obj":"Chemical"},{"id":"T51","span":{"begin":257,"end":267},"obj":"Chemical"}],"attributes":[{"id":"A46","pred":"chebi_id","subj":"T46","obj":"http://purl.obolibrary.org/obo/CHEBI_16199"},{"id":"A47","pred":"chebi_id","subj":"T47","obj":"http://purl.obolibrary.org/obo/CHEBI_16737"},{"id":"A48","pred":"chebi_id","subj":"T48","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A49","pred":"chebi_id","subj":"T49","obj":"http://purl.obolibrary.org/obo/CHEBI_26216"},{"id":"A50","pred":"chebi_id","subj":"T50","obj":"http://purl.obolibrary.org/obo/CHEBI_26708"},{"id":"A51","pred":"chebi_id","subj":"T51","obj":"http://purl.obolibrary.org/obo/CHEBI_35143"}],"text":"Laboratory parameters showed increased urea (360.7 mg/dL), creatinine (8.46 mg/dL), and C-reactive protein (12 mg/L). Normal values were seen for potassium and sodium (5.24 mmol/L; and 136.8 mmol/L, respectively). Leukocytes 6,530/µL, platelets 285x109/µL, hemoglobin 11.2 g/dL, hematocrit 34.5%, neutrophilia (84%), and lymphopenia (12,8%) were also observed. Chest x-rays showed infiltrate and nodular consolidation in the right lower lobe. No CT scan was performed. Blood culture was negative for bacterial growth."}
LitCovid-PD-GO-BP
{"project":"LitCovid-PD-GO-BP","denotations":[{"id":"T4","span":{"begin":510,"end":516},"obj":"http://purl.obolibrary.org/obo/GO_0040007"}],"text":"Laboratory parameters showed increased urea (360.7 mg/dL), creatinine (8.46 mg/dL), and C-reactive protein (12 mg/L). Normal values were seen for potassium and sodium (5.24 mmol/L; and 136.8 mmol/L, respectively). Leukocytes 6,530/µL, platelets 285x109/µL, hemoglobin 11.2 g/dL, hematocrit 34.5%, neutrophilia (84%), and lymphopenia (12,8%) were also observed. Chest x-rays showed infiltrate and nodular consolidation in the right lower lobe. No CT scan was performed. Blood culture was negative for bacterial growth."}
LitCovid-sentences
{"project":"LitCovid-sentences","denotations":[{"id":"T38","span":{"begin":0,"end":117},"obj":"Sentence"},{"id":"T39","span":{"begin":118,"end":213},"obj":"Sentence"},{"id":"T40","span":{"begin":214,"end":360},"obj":"Sentence"},{"id":"T41","span":{"begin":361,"end":442},"obj":"Sentence"},{"id":"T42","span":{"begin":443,"end":468},"obj":"Sentence"},{"id":"T43","span":{"begin":469,"end":517},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Laboratory parameters showed increased urea (360.7 mg/dL), creatinine (8.46 mg/dL), and C-reactive protein (12 mg/L). Normal values were seen for potassium and sodium (5.24 mmol/L; and 136.8 mmol/L, respectively). Leukocytes 6,530/µL, platelets 285x109/µL, hemoglobin 11.2 g/dL, hematocrit 34.5%, neutrophilia (84%), and lymphopenia (12,8%) were also observed. Chest x-rays showed infiltrate and nodular consolidation in the right lower lobe. No CT scan was performed. Blood culture was negative for bacterial growth."}
LitCovid-PD-HP
{"project":"LitCovid-PD-HP","denotations":[{"id":"T20","span":{"begin":297,"end":309},"obj":"Phenotype"},{"id":"T21","span":{"begin":321,"end":332},"obj":"Phenotype"}],"attributes":[{"id":"A20","pred":"hp_id","subj":"T20","obj":"http://purl.obolibrary.org/obo/HP_0011897"},{"id":"A21","pred":"hp_id","subj":"T21","obj":"http://purl.obolibrary.org/obo/HP_0001888"}],"text":"Laboratory parameters showed increased urea (360.7 mg/dL), creatinine (8.46 mg/dL), and C-reactive protein (12 mg/L). Normal values were seen for potassium and sodium (5.24 mmol/L; and 136.8 mmol/L, respectively). Leukocytes 6,530/µL, platelets 285x109/µL, hemoglobin 11.2 g/dL, hematocrit 34.5%, neutrophilia (84%), and lymphopenia (12,8%) were also observed. Chest x-rays showed infiltrate and nodular consolidation in the right lower lobe. No CT scan was performed. Blood culture was negative for bacterial growth."}
LitCovid-PMC-OGER-BB
{"project":"LitCovid-PMC-OGER-BB","denotations":[{"id":"T62","span":{"begin":39,"end":43},"obj":"CHEBI:16199;CHEBI:16199"},{"id":"T63","span":{"begin":59,"end":69},"obj":"CHEBI:16737;CHEBI:16737"},{"id":"T64","span":{"begin":88,"end":106},"obj":"PR:000005897"},{"id":"T65","span":{"begin":214,"end":224},"obj":"CL:0000738"},{"id":"T66","span":{"begin":235,"end":244},"obj":"CL:0000233"},{"id":"T67","span":{"begin":297,"end":309},"obj":"CL:0000775"},{"id":"T68","span":{"begin":437,"end":441},"obj":"UBERON:0002171"},{"id":"T69","span":{"begin":469,"end":474},"obj":"UBERON:0000178"},{"id":"T70","span":{"begin":500,"end":509},"obj":"NCBITaxon:2"},{"id":"T6586","span":{"begin":39,"end":43},"obj":"CHEBI:16199;CHEBI:16199"},{"id":"T20602","span":{"begin":59,"end":69},"obj":"CHEBI:16737;CHEBI:16737"},{"id":"T37535","span":{"begin":88,"end":106},"obj":"PR:000005897"},{"id":"T59138","span":{"begin":214,"end":224},"obj":"CL:0000738"},{"id":"T94991","span":{"begin":235,"end":244},"obj":"CL:0000233"},{"id":"T9825","span":{"begin":297,"end":309},"obj":"CL:0000775"},{"id":"T4481","span":{"begin":437,"end":441},"obj":"UBERON:0002171"},{"id":"T6767","span":{"begin":469,"end":474},"obj":"UBERON:0000178"},{"id":"T5667","span":{"begin":500,"end":509},"obj":"NCBITaxon:2"}],"text":"Laboratory parameters showed increased urea (360.7 mg/dL), creatinine (8.46 mg/dL), and C-reactive protein (12 mg/L). Normal values were seen for potassium and sodium (5.24 mmol/L; and 136.8 mmol/L, respectively). Leukocytes 6,530/µL, platelets 285x109/µL, hemoglobin 11.2 g/dL, hematocrit 34.5%, neutrophilia (84%), and lymphopenia (12,8%) were also observed. Chest x-rays showed infiltrate and nodular consolidation in the right lower lobe. No CT scan was performed. Blood culture was negative for bacterial growth."}