PMC:7340597 / 8968-9233 JSONTXT

{"project":"LitCovid_Glycan-Motif-Structure","denotations":[{"id":"T17","span":{"begin":222,"end":224},"obj":"https://glytoucan.org/Structures/Glycans/G93424OB"},{"id":"T18","span":{"begin":226,"end":239},"obj":"https://glytoucan.org/Structures/Glycans/G93424OB"}],"text":"4) Enterococcus faecalis Probable Yes Yes 4 days\nARDS acute respiratory distress syndrome; BAL broncho-alveolar lavage; CAPA, COVID-19 associated pulmonary aspergillosis; CKI, chronic kidney injury; DM, diabetes mellitus; GM, galactomannan; HT, hypertension; PE pul"}

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T25","span":{"begin":103,"end":111},"obj":"Body_part"},{"id":"T26","span":{"begin":184,"end":190},"obj":"Body_part"}],"attributes":[{"id":"A25","pred":"fma_id","subj":"T25","obj":"http://purl.org/sig/ont/fma/fma264783"},{"id":"A26","pred":"fma_id","subj":"T26","obj":"http://purl.org/sig/ont/fma/fma7203"}],"text":"4) Enterococcus faecalis Probable Yes Yes 4 days\nARDS acute respiratory distress syndrome; BAL broncho-alveolar lavage; CAPA, COVID-19 associated pulmonary aspergillosis; CKI, chronic kidney injury; DM, diabetes mellitus; GM, galactomannan; HT, hypertension; PE pul"}

{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T17","span":{"begin":184,"end":190},"obj":"Body_part"}],"attributes":[{"id":"A17","pred":"uberon_id","subj":"T17","obj":"http://purl.obolibrary.org/obo/UBERON_0002113"}],"text":"4) Enterococcus faecalis Probable Yes Yes 4 days\nARDS acute respiratory distress syndrome; BAL broncho-alveolar lavage; CAPA, COVID-19 associated pulmonary aspergillosis; CKI, chronic kidney injury; DM, diabetes mellitus; GM, galactomannan; HT, hypertension; PE pul"}

{"project":"LitCovid-PubTator","denotations":[{"id":"223","span":{"begin":3,"end":24},"obj":"Species"},{"id":"244","span":{"begin":171,"end":174},"obj":"Gene"},{"id":"245","span":{"begin":222,"end":224},"obj":"Chemical"},{"id":"246","span":{"begin":49,"end":89},"obj":"Disease"},{"id":"247","span":{"begin":126,"end":134},"obj":"Disease"},{"id":"248","span":{"begin":146,"end":169},"obj":"Disease"},{"id":"249","span":{"begin":176,"end":197},"obj":"Disease"},{"id":"250","span":{"begin":199,"end":201},"obj":"Disease"},{"id":"251","span":{"begin":203,"end":220},"obj":"Disease"},{"id":"252","span":{"begin":245,"end":257},"obj":"Disease"}],"attributes":[{"id":"A223","pred":"tao:has_database_id","subj":"223","obj":"Tax:1351"},{"id":"A244","pred":"tao:has_database_id","subj":"244","obj":"Gene:1119"},{"id":"A245","pred":"tao:has_database_id","subj":"245","obj":"MESH:C012990"},{"id":"A246","pred":"tao:has_database_id","subj":"246","obj":"MESH:D012128"},{"id":"A247","pred":"tao:has_database_id","subj":"247","obj":"MESH:C000657245"},{"id":"A248","pred":"tao:has_database_id","subj":"248","obj":"MESH:D055732"},{"id":"A249","pred":"tao:has_database_id","subj":"249","obj":"MESH:D051436"},{"id":"A250","pred":"tao:has_database_id","subj":"250","obj":"MESH:D009223"},{"id":"A251","pred":"tao:has_database_id","subj":"251","obj":"MESH:D003920"},{"id":"A252","pred":"tao:has_database_id","subj":"252","obj":"MESH:D006973"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"4) Enterococcus faecalis Probable Yes Yes 4 days\nARDS acute respiratory distress syndrome; BAL broncho-alveolar lavage; CAPA, COVID-19 associated pulmonary aspergillosis; CKI, chronic kidney injury; DM, diabetes mellitus; GM, galactomannan; HT, hypertension; PE pul"}

{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T86","span":{"begin":49,"end":53},"obj":"Disease"},{"id":"T87","span":{"begin":54,"end":89},"obj":"Disease"},{"id":"T88","span":{"begin":60,"end":89},"obj":"Disease"},{"id":"T89","span":{"begin":120,"end":124},"obj":"Disease"},{"id":"T90","span":{"begin":126,"end":134},"obj":"Disease"},{"id":"T91","span":{"begin":156,"end":169},"obj":"Disease"},{"id":"T92","span":{"begin":191,"end":197},"obj":"Disease"},{"id":"T93","span":{"begin":199,"end":201},"obj":"Disease"},{"id":"T95","span":{"begin":203,"end":220},"obj":"Disease"},{"id":"T96","span":{"begin":245,"end":257},"obj":"Disease"}],"attributes":[{"id":"A86","pred":"mondo_id","subj":"T86","obj":"http://purl.obolibrary.org/obo/MONDO_0006502"},{"id":"A87","pred":"mondo_id","subj":"T87","obj":"http://purl.obolibrary.org/obo/MONDO_0006502"},{"id":"A88","pred":"mondo_id","subj":"T88","obj":"http://purl.obolibrary.org/obo/MONDO_0009971"},{"id":"A89","pred":"mondo_id","subj":"T89","obj":"http://purl.obolibrary.org/obo/MONDO_0007163"},{"id":"A90","pred":"mondo_id","subj":"T90","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A91","pred":"mondo_id","subj":"T91","obj":"http://purl.obolibrary.org/obo/MONDO_0005657"},{"id":"A92","pred":"mondo_id","subj":"T92","obj":"http://purl.obolibrary.org/obo/MONDO_0021178"},{"id":"A93","pred":"mondo_id","subj":"T93","obj":"http://purl.obolibrary.org/obo/MONDO_0005015"},{"id":"A94","pred":"mondo_id","subj":"T93","obj":"http://purl.obolibrary.org/obo/MONDO_0016367"},{"id":"A95","pred":"mondo_id","subj":"T95","obj":"http://purl.obolibrary.org/obo/MONDO_0005015"},{"id":"A96","pred":"mondo_id","subj":"T96","obj":"http://purl.obolibrary.org/obo/MONDO_0005044"}],"text":"4) Enterococcus faecalis Probable Yes Yes 4 days\nARDS acute respiratory distress syndrome; BAL broncho-alveolar lavage; CAPA, COVID-19 associated pulmonary aspergillosis; CKI, chronic kidney injury; DM, diabetes mellitus; GM, galactomannan; HT, hypertension; PE pul"}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T60","span":{"begin":184,"end":190},"obj":"http://purl.obolibrary.org/obo/UBERON_0002113"},{"id":"T61","span":{"begin":184,"end":190},"obj":"http://www.ebi.ac.uk/efo/EFO_0000927"},{"id":"T62","span":{"begin":184,"end":190},"obj":"http://www.ebi.ac.uk/efo/EFO_0000929"},{"id":"T63","span":{"begin":241,"end":243},"obj":"http://purl.obolibrary.org/obo/CLO_0004265"}],"text":"4) Enterococcus faecalis Probable Yes Yes 4 days\nARDS acute respiratory distress syndrome; BAL broncho-alveolar lavage; CAPA, COVID-19 associated pulmonary aspergillosis; CKI, chronic kidney injury; DM, diabetes mellitus; GM, galactomannan; HT, hypertension; PE pul"}

{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T56","span":{"begin":91,"end":94},"obj":"Chemical"},{"id":"T57","span":{"begin":199,"end":201},"obj":"Chemical"},{"id":"T58","span":{"begin":222,"end":224},"obj":"Chemical"},{"id":"T60","span":{"begin":226,"end":239},"obj":"Chemical"},{"id":"T61","span":{"begin":259,"end":261},"obj":"Chemical"}],"attributes":[{"id":"A56","pred":"chebi_id","subj":"T56","obj":"http://purl.obolibrary.org/obo/CHEBI_64198"},{"id":"A57","pred":"chebi_id","subj":"T57","obj":"http://purl.obolibrary.org/obo/CHEBI_141426"},{"id":"A58","pred":"chebi_id","subj":"T58","obj":"http://purl.obolibrary.org/obo/CHEBI_74120"},{"id":"A59","pred":"chebi_id","subj":"T58","obj":"http://purl.obolibrary.org/obo/CHEBI_27680"},{"id":"A60","pred":"chebi_id","subj":"T60","obj":"http://purl.obolibrary.org/obo/CHEBI_27680"},{"id":"A61","pred":"chebi_id","subj":"T61","obj":"http://purl.obolibrary.org/obo/CHEBI_16038"},{"id":"A62","pred":"chebi_id","subj":"T61","obj":"http://purl.obolibrary.org/obo/CHEBI_17553"},{"id":"A63","pred":"chebi_id","subj":"T61","obj":"http://purl.obolibrary.org/obo/CHEBI_74762"}],"text":"4) Enterococcus faecalis Probable Yes Yes 4 days\nARDS acute respiratory distress syndrome; BAL broncho-alveolar lavage; CAPA, COVID-19 associated pulmonary aspergillosis; CKI, chronic kidney injury; DM, diabetes mellitus; GM, galactomannan; HT, hypertension; PE pul"}

{"project":"LitCovid-PD-HP","denotations":[{"id":"T15","span":{"begin":60,"end":80},"obj":"Phenotype"},{"id":"T16","span":{"begin":203,"end":220},"obj":"Phenotype"},{"id":"T17","span":{"begin":245,"end":257},"obj":"Phenotype"}],"attributes":[{"id":"A15","pred":"hp_id","subj":"T15","obj":"http://purl.obolibrary.org/obo/HP_0002098"},{"id":"A16","pred":"hp_id","subj":"T16","obj":"http://purl.obolibrary.org/obo/HP_0000819"},{"id":"A17","pred":"hp_id","subj":"T17","obj":"http://purl.obolibrary.org/obo/HP_0000822"}],"text":"4) Enterococcus faecalis Probable Yes Yes 4 days\nARDS acute respiratory distress syndrome; BAL broncho-alveolar lavage; CAPA, COVID-19 associated pulmonary aspergillosis; CKI, chronic kidney injury; DM, diabetes mellitus; GM, galactomannan; HT, hypertension; PE pul"}

{"project":"LitCovid-PD-GlycoEpitope","denotations":[{"id":"T15","span":{"begin":222,"end":224},"obj":"GlycoEpitope"},{"id":"T16","span":{"begin":226,"end":239},"obj":"GlycoEpitope"}],"attributes":[{"id":"A15","pred":"glyco_epitope_db_id","subj":"T15","obj":"http://www.glycoepitope.jp/epitopes/EP0510"},{"id":"A16","pred":"glyco_epitope_db_id","subj":"T16","obj":"http://www.glycoepitope.jp/epitopes/EP0510"}],"text":"4) Enterococcus faecalis Probable Yes Yes 4 days\nARDS acute respiratory distress syndrome; BAL broncho-alveolar lavage; CAPA, COVID-19 associated pulmonary aspergillosis; CKI, chronic kidney injury; DM, diabetes mellitus; GM, galactomannan; HT, hypertension; PE pul"}

{"project":"LitCovid-PMC-OGER-BB","denotations":[{"id":"T184","span":{"begin":60,"end":71},"obj":"UBERON:0001004"},{"id":"T185","span":{"begin":91,"end":102},"obj":"UBERON:0002299"},{"id":"T186","span":{"begin":103,"end":118},"obj":"UBERON:0002299"},{"id":"T187","span":{"begin":126,"end":134},"obj":"SP_7"},{"id":"T188","span":{"begin":146,"end":155},"obj":"UBERON:0002048"},{"id":"T189","span":{"begin":184,"end":190},"obj":"UBERON:0002113"},{"id":"T173","span":{"begin":15,"end":23},"obj":"UBERON:0003215"},{"id":"T174","span":{"begin":36,"end":48},"obj":"CL:0000057"},{"id":"T175","span":{"begin":81,"end":89},"obj":"UBERON:0003215"},{"id":"T176","span":{"begin":90,"end":95},"obj":"UBERON:0003037"},{"id":"T177","span":{"begin":103,"end":110},"obj":"UBERON:0010210"},{"id":"T178","span":{"begin":136,"end":148},"obj":"GO:0005634;CL:0000647"},{"id":"T179","span":{"begin":149,"end":159},"obj":"CL:0000647"},{"id":"T180","span":{"begin":161,"end":172},"obj":"GO:0005634"},{"id":"T181","span":{"begin":173,"end":189},"obj":"GO:0016234"}],"text":"4) Enterococcus faecalis Probable Yes Yes 4 days\nARDS acute respiratory distress syndrome; BAL broncho-alveolar lavage; CAPA, COVID-19 associated pulmonary aspergillosis; CKI, chronic kidney injury; DM, diabetes mellitus; GM, galactomannan; HT, hypertension; PE pul"}