> top > docs > PMC:7340597 > spans > 543-1293 > annotations

PMC:7340597 / 543-1293 JSONTXT

Annnotations TAB JSON ListView MergeView

LitCovid_Glycan-Motif-Structure

Id Subject Object Predicate Lexical cue
T1 260-273 https://glytoucan.org/Structures/Glycans/G93424OB denotes galactomannan

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T2 379-384 Body_part denotes Chest http://purl.org/sig/ont/fma/fma9576
T3 592-600 Body_part denotes alveolar http://purl.org/sig/ont/fma/fma264783

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T2 379-384 Body_part denotes Chest http://purl.obolibrary.org/obo/UBERON_0001443

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
32 0-8 Species denotes Patients Tax:9606
33 238-246 Species denotes patients Tax:9606
34 313-321 Species denotes patients Tax:9606
35 395-403 Species denotes patients Tax:9606
36 644-652 Species denotes patients Tax:9606
37 260-273 Chemical denotes galactomannan MESH:C012990
38 211-229 Disease denotes pulmonary embolism MESH:D011655
39 334-342 Disease denotes COVID-19 MESH:C000657245
40 354-377 Disease denotes pulmonary aspergillosis MESH:D055732
41 573-582 Disease denotes pneumonia MESH:D011014
42 592-607 Disease denotes alveolar damage MESH:D055370
43 609-617 Disease denotes fibrosis MESH:D005355
44 667-676 Disease denotes pneumonia MESH:D011014
45 727-749 Disease denotes invasive aspergillosis MESH:D055744

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T7 211-229 Disease denotes pulmonary embolism http://purl.obolibrary.org/obo/MONDO_0005279
T8 334-342 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T9 364-377 Disease denotes aspergillosis http://purl.obolibrary.org/obo/MONDO_0005657
T10 562-582 Disease denotes organizing pneumonia http://purl.obolibrary.org/obo/MONDO_0015265|http://purl.obolibrary.org/obo/MONDO_0056821
T12 573-582 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T13 656-676 Disease denotes organizing pneumonia http://purl.obolibrary.org/obo/MONDO_0015265|http://purl.obolibrary.org/obo/MONDO_0056821
T15 667-676 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T16 727-749 Disease denotes invasive aspergillosis http://purl.obolibrary.org/obo/MONDO_0000240
T17 736-749 Disease denotes aspergillosis http://purl.obolibrary.org/obo/MONDO_0005657

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T4 46-51 http://purl.obolibrary.org/obo/UBERON_0003101 denotes males
T5 46-51 http://www.ebi.ac.uk/efo/EFO_0000970 denotes males
T6 60-67 http://purl.obolibrary.org/obo/UBERON_0003100 denotes females
T7 139-141 http://purl.obolibrary.org/obo/CLO_0001313 denotes 36
T8 153-154 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T9 379-384 http://www.ebi.ac.uk/efo/EFO_0000965 denotes Chest
T10 562-572 http://purl.obolibrary.org/obo/OBI_0000245 denotes organizing
T11 656-666 http://purl.obolibrary.org/obo/OBI_0000245 denotes organizing

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T1 260-273 Chemical denotes galactomannan http://purl.obolibrary.org/obo/CHEBI_27680

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T1 211-229 Phenotype denotes pulmonary embolism http://purl.obolibrary.org/obo/HP_0002204
T2 573-582 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T3 584-607 Phenotype denotes diffuse alveolar damage http://purl.obolibrary.org/obo/HP_0033006
T4 667-676 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090

LitCovid-PD-GlycoEpitope

Id Subject Object Predicate Lexical cue glyco_epitope_db_id
T1 260-273 GlycoEpitope denotes galactomannan http://www.glycoepitope.jp/epitopes/EP0510

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T10 0-82 Sentence denotes Patients age ranged from 58 to 83 years, five males and two females were included.
T11 83-182 Sentence denotes Time from hospital admission to death ranged from 12 to 36 days, with a mean of 20 ventilated days.
T12 183-378 Sentence denotes ICU stay was complicated by pulmonary embolism in five patients and positive galactomannan on bronchoalveolar lavage fluid in six patients, suggesting COVID-19 associated pulmonary aspergillosis.
T13 379-487 Sentence denotes Chest CT in all patients showed ground glass opacities, commonly progressing to nondependent consolidations.
T14 488-677 Sentence denotes We observed four distinct histopathological patterns: acute fibrinous and organizing pneumonia, diffuse alveolar damage, fibrosis and, in four out of seven patients an organizing pneumonia.
T15 678-750 Sentence denotes None of the biopsy specimens showed any signs of invasive aspergillosis.

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T6 115-120 GO:0016265 denotes death
T7 211-220 UBERON:0002048 denotes pulmonary
T8 260-273 CHEBI:27680;CHEBI:27680 denotes galactomannan
T9 277-292 UBERON:0002186;BV_4 denotes bronchoalveolar
T10 293-299 BV_4 denotes lavage
T11 300-305 BV_4;UBERON:0006314 denotes fluid
T12 334-342 SP_7 denotes COVID-19
T13 354-363 UBERON:0002048 denotes pulmonary
T14 592-600 UBERON:0003215 denotes alveolar
T47338 27-35 SP_7 denotes to 83 y
T50253 131-135 UBERON:0002048 denotes m 12
T37393 452-466 GO:0007596 denotes ing to nondepe
T57275 539-545 UBERON:0001638 denotes s: acu
T97784 546-561 GO:0007596 denotes e fibrinous and
T2103 582-590 SP_7 denotes , diffus
T61739 634-643 UBERON:0002048 denotes of seven
T56562 697-705 SP_7 denotes specimen