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PMC:7340597 / 11754-12573 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T54 0-5 Body_part denotes Chest http://purl.org/sig/ont/fma/fma9576
T55 64-69 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T56 129-134 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T57 261-265 Body_part denotes dens http://purl.org/sig/ont/fma/fma24043
T58 330-335 Body_part denotes lungs http://purl.org/sig/ont/fma/fma68877

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T23 0-5 Body_part denotes Chest http://purl.obolibrary.org/obo/UBERON_0001443
T24 64-69 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T25 129-134 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
330 37-44 Species denotes patient Tax:9606
331 261-265 Chemical denotes dens MESH:D004052

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T121 380-394 Disease denotes bronchiectasis http://purl.obolibrary.org/obo/MONDO_0004822
T122 535-549 Disease denotes bronchiectasis http://purl.obolibrary.org/obo/MONDO_0004822
T123 804-818 Disease denotes bronchiectasis http://purl.obolibrary.org/obo/MONDO_0004822

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T85 0-5 http://www.ebi.ac.uk/efo/EFO_0000965 denotes Chest
T86 51-52 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T87 64-69 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T88 102-103 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T89 129-134 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T90 315-317 http://purl.obolibrary.org/obo/CLO_0001236 denotes 2A
T91 330-335 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lungs

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T27 380-394 Phenotype denotes bronchiectasis http://purl.obolibrary.org/obo/HP_0002110
T28 526-549 Phenotype denotes traction bronchiectasis http://purl.obolibrary.org/obo/HP_0032969
T29 804-818 Phenotype denotes bronchiectasis http://purl.obolibrary.org/obo/HP_0002110

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T95 28-166 Sentence denotes For each patient image A represents chest CT at hospital admission, image B follow up CT-scan (note: chest CT of case 4 was not repeated).
T96 167-314 Sentence denotes 1A: bilateral areas of GGO, patchy subpleural non-dependant consolidations 1B: progression of dens subpleural consolidations with air-bronchograms.
T97 315-425 Sentence denotes 2A GGO in both lungs, combined with crazy-paving pattern, subtle bronchiectasis are present in affected areas.
T98 426-550 Sentence denotes 2B GGO persisted, without progression to consolidations, more pronounced fibrotic reticulation with traction bronchiectasis.
T99 551-620 Sentence denotes 3A diffuse bilateral GGO with large gravity dependant consolidations.
T100 621-719 Sentence denotes 3B persistent GGO and consolidation, newly formed cyst-like lesions in middle and ventral regions.
T101 720-819 Sentence denotes 4A bilateral areas of GGO, patchy non-dependant peripheral consolidations with mild bronchiectasis.

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T328 149-203 NCBITaxon:746128 denotes as not repeated). 1A: bilateral areas of GGO, patchy s
T329 251-312 NCBITaxon:1352 denotes ession of dens subpleural consolidations with air-bronchogram
T330 467-487 UBERON:0002048 denotes consolidations, more
T203 362-367 UBERON:0001443 denotes g pat
T15177 484-494 UBERON:0002106 denotes ore pronou
T205 668-673 UBERON:0002113 denotes ed cy
T36509 692-697 UBERON:0002113 denotes middl
T207 774-779 UBERON:0001443 denotes eral
T30186 802-813 UBERON:0002048 denotes d bronchiec