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LitCovid_Glycan-Motif-Structure

Id Subject Object Predicate Lexical cue
T1 803-816 https://glytoucan.org/Structures/Glycans/G93424OB denotes galactomannan
T2 4872-4879 https://glytoucan.org/Structures/Glycans/G00021MO denotes heparin
T3 4872-4879 https://glytoucan.org/Structures/Glycans/G54161DR denotes heparin
T4 5162-5175 https://glytoucan.org/Structures/Glycans/G93424OB denotes galactomannan
T5 5231-5244 https://glytoucan.org/Structures/Glycans/G93424OB denotes galactomannan
T6 5246-5248 https://glytoucan.org/Structures/Glycans/G93424OB denotes GM
T7 5600-5602 https://glytoucan.org/Structures/Glycans/G93424OB denotes GM
T8 7368-7370 https://glytoucan.org/Structures/Glycans/G93424OB denotes GM
T9 8241-8243 https://glytoucan.org/Structures/Glycans/G93424OB denotes GM
T10 8416-8418 https://glytoucan.org/Structures/Glycans/G93424OB denotes GM
T11 8473-8475 https://glytoucan.org/Structures/Glycans/G93424OB denotes GM
T12 8574-8576 https://glytoucan.org/Structures/Glycans/G93424OB denotes GM
T13 8656-8658 https://glytoucan.org/Structures/Glycans/G93424OB denotes GM
T14 8774-8776 https://glytoucan.org/Structures/Glycans/G93424OB denotes GM
T15 8877-8879 https://glytoucan.org/Structures/Glycans/G93424OB denotes GM
T16 8949-8951 https://glytoucan.org/Structures/Glycans/G93424OB denotes GM
T17 9190-9192 https://glytoucan.org/Structures/Glycans/G93424OB denotes GM
T18 9194-9207 https://glytoucan.org/Structures/Glycans/G93424OB denotes galactomannan
T19 16023-16025 https://glytoucan.org/Structures/Glycans/G93424OB denotes GM
T20 16161-16163 https://glytoucan.org/Structures/Glycans/G93424OB denotes GM
T21 18064-18066 https://glytoucan.org/Structures/Glycans/G93424OB denotes GM
T22 19458-19460 https://glytoucan.org/Structures/Glycans/G93424OB denotes GM
T23 27015-27028 https://glytoucan.org/Structures/Glycans/G93424OB denotes galactomannan

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T1 339-343 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T2 922-927 Body_part denotes Chest http://purl.org/sig/ont/fma/fma9576
T3 1135-1143 Body_part denotes alveolar http://purl.org/sig/ont/fma/fma264783
T4 2255-2261 Body_part denotes thorax http://purl.org/sig/ont/fma/fma9576
T5 2538-2542 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T6 3271-3277 Body_part denotes tissue http://purl.org/sig/ont/fma/fma9637
T7 3423-3431 Body_part denotes alveolar http://purl.org/sig/ont/fma/fma264783
T8 3752-3756 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T9 3757-3763 Body_part denotes tissue http://purl.org/sig/ont/fma/fma9637
T10 4393-4397 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T11 4548-4554 Body_part denotes sputum http://purl.org/sig/ont/fma/fma312401
T12 4646-4661 Body_part denotes digestive tract http://purl.org/sig/ont/fma/fma317863
T13 4872-4879 Body_part denotes heparin http://purl.org/sig/ont/fma/fma82839
T14 5177-5182 Body_part denotes serum http://purl.org/sig/ont/fma/fma63083
T15 5187-5193 Body_part denotes sputum http://purl.org/sig/ont/fma/fma312401
T16 5636-5641 Body_part denotes serum http://purl.org/sig/ont/fma/fma63083
T17 5725-5729 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T18 5830-5835 Body_part denotes lungs http://purl.org/sig/ont/fma/fma68877
T19 5864-5868 Body_part denotes Lung http://purl.org/sig/ont/fma/fma7195
T20 6056-6061 Body_part denotes lungs http://purl.org/sig/ont/fma/fma68877
T21 6652-6657 Body_part denotes lungs http://purl.org/sig/ont/fma/fma68877
T22 7733-7738 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T23 7945-7950 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T24 7984-7989 Body_part denotes lungs http://purl.org/sig/ont/fma/fma68877
T25 9071-9079 Body_part denotes alveolar http://purl.org/sig/ont/fma/fma264783
T26 9152-9158 Body_part denotes kidney http://purl.org/sig/ont/fma/fma7203
T27 9271-9276 Body_part denotes Chest http://purl.org/sig/ont/fma/fma9576
T28 9489-9497 Body_part denotes alveolar http://purl.org/sig/ont/fma/fma264783
T29 9510-9522 Body_part denotes fibroblastic http://purl.org/sig/ont/fma/fma63877
T30 9624-9628 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T31 9805-9813 Body_part denotes alveolar http://purl.org/sig/ont/fma/fma264783
T32 9872-9876 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T33 10057-10065 Body_part denotes alveolar http://purl.org/sig/ont/fma/fma264783
T34 10066-10078 Body_part denotes fibroblastic http://purl.org/sig/ont/fma/fma63877
T35 10146-10150 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T36 10299-10307 Body_part denotes alveolar http://purl.org/sig/ont/fma/fma264783
T37 10308-10320 Body_part denotes fibroblastic http://purl.org/sig/ont/fma/fma63877
T38 10321-10327 Body_part denotes tissue http://purl.org/sig/ont/fma/fma9637
T39 10388-10396 Body_part denotes alveolar http://purl.org/sig/ont/fma/fma264783
T40 10465-10469 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T41 10544-10552 Body_part denotes alveolar http://purl.org/sig/ont/fma/fma264783
T42 10565-10577 Body_part denotes fibroblastic http://purl.org/sig/ont/fma/fma63877
T43 10653-10657 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T44 10730-10738 Body_part denotes alveolar http://purl.org/sig/ont/fma/fma264783
T45 10751-10763 Body_part denotes fibroblastic http://purl.org/sig/ont/fma/fma63877
T46 10790-10798 Body_part denotes alveolar http://purl.org/sig/ont/fma/fma264783
T47 10867-10871 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T48 10991-10999 Body_part denotes alveolar http://purl.org/sig/ont/fma/fma264783
T49 11012-11024 Body_part denotes fibroblastic http://purl.org/sig/ont/fma/fma63877
T50 11056-11064 Body_part denotes alveolar http://purl.org/sig/ont/fma/fma264783
T51 11133-11137 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T52 11242-11250 Body_part denotes alveolar http://purl.org/sig/ont/fma/fma264783
T53 11677-11682 Body_part denotes Chest http://purl.org/sig/ont/fma/fma9576
T54 11754-11759 Body_part denotes Chest http://purl.org/sig/ont/fma/fma9576
T55 11818-11823 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T56 11883-11888 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T57 12015-12019 Body_part denotes dens http://purl.org/sig/ont/fma/fma24043
T58 12084-12089 Body_part denotes lungs http://purl.org/sig/ont/fma/fma68877
T59 12777-12782 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T60 13185-13190 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T61 13294-13298 Body_part denotes dens http://purl.org/sig/ont/fma/fma24043
T62 13467-13471 Body_part denotes head http://purl.org/sig/ont/fma/fma7154
T63 13481-13486 Body_part denotes brain http://purl.org/sig/ont/fma/fma50801
T64 13551-13582 Body_part denotes right posterior cerebral artery http://purl.org/sig/ont/fma/fma50584
T65 13706-13710 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T66 13711-13717 Body_part denotes tissue http://purl.org/sig/ont/fma/fma9637
T67 13781-13793 Body_part denotes fibroblastic http://purl.org/sig/ont/fma/fma63877
T68 13845-13856 Body_part denotes histiocytes http://purl.org/sig/ont/fma/fma83585
T69 13891-13895 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T70 13896-13902 Body_part denotes tissue http://purl.org/sig/ont/fma/fma9637
T71 13988-13996 Body_part denotes alveolar http://purl.org/sig/ont/fma/fma264783
T72 14049-14062 Body_part denotes blood vessels http://purl.org/sig/ont/fma/fma63183
T73 14049-14054 Body_part denotes blood http://purl.org/sig/ont/fma/fma9670
T74 14070-14078 Body_part denotes alveolar http://purl.org/sig/ont/fma/fma264783
T75 14412-14416 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T76 14444-14452 Body_part denotes alveolar http://purl.org/sig/ont/fma/fma264783
T77 14453-14465 Body_part denotes fibroblastic http://purl.org/sig/ont/fma/fma63877
T78 14542-14550 Body_part denotes alveolar http://purl.org/sig/ont/fma/fma264783
T79 14639-14650 Body_part denotes neutrophils http://purl.org/sig/ont/fma/fma62860
T80 14655-14666 Body_part denotes lymphocytes http://purl.org/sig/ont/fma/fma62863
T81 14728-14736 Body_part denotes alveolar http://purl.org/sig/ont/fma/fma264783
T82 14901-14912 Body_part denotes pneumocytes http://purl.org/sig/ont/fma/fma62499
T83 14989-14994 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T84 15278-15283 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T85 15383-15406 Body_part denotes bronchovascular bundles http://purl.org/sig/ont/fma/fma84474
T86 15734-15739 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T87 15796-15806 Body_part denotes right lung http://purl.org/sig/ont/fma/fma7309
T88 16321-16325 Body_part denotes head http://purl.org/sig/ont/fma/fma7154
T89 16435-16448 Body_part denotes frontal lobes http://purl.org/sig/ont/fma/fma61824
T90 16533-16537 Body_part denotes head http://purl.org/sig/ont/fma/fma7154
T91 16686-16690 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T92 16691-16697 Body_part denotes tissue http://purl.org/sig/ont/fma/fma9637
T93 16752-16756 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T94 16771-16779 Body_part denotes Alveolar http://purl.org/sig/ont/fma/fma264783
T95 16892-16903 Body_part denotes pneumocytes http://purl.org/sig/ont/fma/fma62499
T96 16905-16925 Body_part denotes bronchial epithelium http://purl.org/sig/ont/fma/fma67782
T97 16915-16925 Body_part denotes epithelium http://purl.org/sig/ont/fma/fma9639
T98 16931-16944 Body_part denotes blood vessels http://purl.org/sig/ont/fma/fma63183
T99 16931-16936 Body_part denotes blood http://purl.org/sig/ont/fma/fma9670
T100 17089-17097 Body_part denotes alveolar http://purl.org/sig/ont/fma/fma264783
T101 17209-17214 Body_part denotes Chest http://purl.org/sig/ont/fma/fma9576
T102 17588-17593 Body_part denotes Chest http://purl.org/sig/ont/fma/fma9576
T103 17854-17858 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T104 18272-18276 Body_part denotes head http://purl.org/sig/ont/fma/fma7154
T105 18502-18506 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T106 18507-18513 Body_part denotes tissue http://purl.org/sig/ont/fma/fma9637
T107 18632-18643 Body_part denotes neutrophils http://purl.org/sig/ont/fma/fma62860
T108 18648-18659 Body_part denotes lymphocytes http://purl.org/sig/ont/fma/fma62863
T109 18687-18695 Body_part denotes alveolar http://purl.org/sig/ont/fma/fma264783
T110 18696-18708 Body_part denotes fibroblastic http://purl.org/sig/ont/fma/fma63877
T111 18825-18833 Body_part denotes alveolar http://purl.org/sig/ont/fma/fma264783
T112 19047-19055 Body_part denotes alveolar http://purl.org/sig/ont/fma/fma264783
T113 19577-19582 Body_part denotes Chest http://purl.org/sig/ont/fma/fma9576
T114 19937-19941 Body_part denotes head http://purl.org/sig/ont/fma/fma7154
T115 20243-20247 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T116 20310-20318 Body_part denotes alveolar http://purl.org/sig/ont/fma/fma264783
T117 20334-20346 Body_part denotes fibroblastic http://purl.org/sig/ont/fma/fma63877
T118 20347-20353 Body_part denotes tissue http://purl.org/sig/ont/fma/fma9637
T119 20691-20699 Body_part denotes alveolar http://purl.org/sig/ont/fma/fma264783
T120 20736-20749 Body_part denotes blood vessels http://purl.org/sig/ont/fma/fma63183
T121 20736-20741 Body_part denotes blood http://purl.org/sig/ont/fma/fma9670
T122 20819-20830 Body_part denotes eosinophils http://purl.org/sig/ont/fma/fma62861
T123 21915-21919 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T124 22684-22688 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T125 23332-23340 Body_part denotes alveolar http://purl.org/sig/ont/fma/fma264783
T126 23417-23423 Body_part denotes plasma http://purl.org/sig/ont/fma/fma62970
T127 23424-23432 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T128 23516-23526 Body_part denotes fibroblast http://purl.org/sig/ont/fma/fma63877
T129 23543-23560 Body_part denotes connective tissue http://purl.org/sig/ont/fma/fma9640
T130 23565-23575 Body_part denotes fibroblast http://purl.org/sig/ont/fma/fma63877
T131 23608-23616 Body_part denotes alveolar http://purl.org/sig/ont/fma/fma264783
T132 23676-23686 Body_part denotes fibroblast http://purl.org/sig/ont/fma/fma63877
T133 23947-23969 Body_part denotes alveolar type II cells http://purl.org/sig/ont/fma/fma62501
T134 23964-23969 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T135 24163-24175 Body_part denotes Fibroblastic http://purl.org/sig/ont/fma/fma63877
T136 24318-24320 Body_part denotes V2 http://purl.org/sig/ont/fma/fma13443|http://purl.org/sig/ont/fma/fma68615
T138 24769-24773 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T139 24971-24976 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T140 26465-26469 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T141 26492-26500 Body_part denotes alveolar http://purl.org/sig/ont/fma/fma264783
T142 26550-26558 Body_part denotes cytokine http://purl.org/sig/ont/fma/fma84050
T143 26596-26609 Body_part denotes T-lymphocytes http://purl.org/sig/ont/fma/fma62870
T144 26630-26635 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T145 26669-26673 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T146 26674-26680 Body_part denotes tissue http://purl.org/sig/ont/fma/fma9637
T147 27157-27161 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T148 28045-28051 Body_part denotes tissue http://purl.org/sig/ont/fma/fma9637
T149 28223-28227 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T150 28867-28872 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 339-343 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T2 922-927 Body_part denotes Chest http://purl.obolibrary.org/obo/UBERON_0001443
T3 2538-2542 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T4 3271-3277 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T5 3752-3756 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T6 3757-3763 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T7 4393-4397 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T8 4548-4554 Body_part denotes sputum http://purl.obolibrary.org/obo/UBERON_0007311
T9 4646-4661 Body_part denotes digestive tract http://purl.obolibrary.org/obo/UBERON_0001555
T10 5177-5182 Body_part denotes serum http://purl.obolibrary.org/obo/UBERON_0001977
T11 5187-5193 Body_part denotes sputum http://purl.obolibrary.org/obo/UBERON_0007311
T12 5636-5641 Body_part denotes serum http://purl.obolibrary.org/obo/UBERON_0001977
T13 5725-5729 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T14 5864-5868 Body_part denotes Lung http://purl.obolibrary.org/obo/UBERON_0002048
T15 7733-7738 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T16 7945-7950 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T17 9152-9158 Body_part denotes kidney http://purl.obolibrary.org/obo/UBERON_0002113
T18 9271-9276 Body_part denotes Chest http://purl.obolibrary.org/obo/UBERON_0001443
T19 9569-9576 Body_part denotes vessels http://purl.obolibrary.org/obo/UBERON_0000055
T20 10321-10327 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T21 10367-10374 Body_part denotes exudate http://purl.obolibrary.org/obo/UBERON_0007780
T22 11677-11682 Body_part denotes Chest http://purl.obolibrary.org/obo/UBERON_0001443
T23 11754-11759 Body_part denotes Chest http://purl.obolibrary.org/obo/UBERON_0001443
T24 11818-11823 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T25 11883-11888 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T26 12777-12782 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T27 13185-13190 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T28 13467-13471 Body_part denotes head http://purl.obolibrary.org/obo/UBERON_0000033
T29 13481-13486 Body_part denotes brain http://purl.obolibrary.org/obo/UBERON_0000955
T30 13557-13582 Body_part denotes posterior cerebral artery http://purl.obolibrary.org/obo/UBERON_0001636
T31 13567-13582 Body_part denotes cerebral artery http://purl.obolibrary.org/obo/UBERON_0004449
T32 13576-13582 Body_part denotes artery http://purl.obolibrary.org/obo/UBERON_0001637
T33 13706-13710 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T34 13711-13717 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T35 13891-13895 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T36 13896-13902 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T37 14007-14014 Body_part denotes exudate http://purl.obolibrary.org/obo/UBERON_0007780
T38 14049-14062 Body_part denotes blood vessels http://purl.obolibrary.org/obo/UBERON_0001981
T39 14049-14054 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178
T40 14055-14062 Body_part denotes vessels http://purl.obolibrary.org/obo/UBERON_0000055
T41 14148-14154 Body_part denotes vessel http://purl.obolibrary.org/obo/UBERON_0000055
T42 14412-14416 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T43 14787-14794 Body_part denotes exudate http://purl.obolibrary.org/obo/UBERON_0007780
T44 14855-14861 Body_part denotes vessel http://purl.obolibrary.org/obo/UBERON_0000055
T45 15278-15283 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T46 15734-15739 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T47 15796-15806 Body_part denotes right lung http://purl.obolibrary.org/obo/UBERON_0002167
T48 15802-15806 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T49 16321-16325 Body_part denotes head http://purl.obolibrary.org/obo/UBERON_0000033
T50 16435-16448 Body_part denotes frontal lobes http://purl.obolibrary.org/obo/UBERON_0016525
T51 16533-16537 Body_part denotes head http://purl.obolibrary.org/obo/UBERON_0000033
T52 16686-16690 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T53 16691-16697 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T54 16752-16756 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T55 16905-16925 Body_part denotes bronchial epithelium http://purl.obolibrary.org/obo/UBERON_0002031
T56 16915-16925 Body_part denotes epithelium http://purl.obolibrary.org/obo/UBERON_0000483
T57 16931-16944 Body_part denotes blood vessels http://purl.obolibrary.org/obo/UBERON_0001981
T58 16931-16936 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178
T59 16937-16944 Body_part denotes vessels http://purl.obolibrary.org/obo/UBERON_0000055
T60 17209-17214 Body_part denotes Chest http://purl.obolibrary.org/obo/UBERON_0001443
T61 17588-17593 Body_part denotes Chest http://purl.obolibrary.org/obo/UBERON_0001443
T62 17854-17858 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T63 18272-18276 Body_part denotes head http://purl.obolibrary.org/obo/UBERON_0000033
T64 18502-18506 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T65 18507-18513 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T66 18825-18838 Body_part denotes alveolar wall http://purl.obolibrary.org/obo/UBERON_0004894
T67 19577-19582 Body_part denotes Chest http://purl.obolibrary.org/obo/UBERON_0001443
T68 19937-19941 Body_part denotes head http://purl.obolibrary.org/obo/UBERON_0000033
T69 20243-20247 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T70 20347-20353 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T71 20459-20466 Body_part denotes exudate http://purl.obolibrary.org/obo/UBERON_0007780
T72 20736-20749 Body_part denotes blood vessels http://purl.obolibrary.org/obo/UBERON_0001981
T73 20736-20741 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178
T74 20742-20749 Body_part denotes vessels http://purl.obolibrary.org/obo/UBERON_0000055
T75 21915-21919 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T76 22684-22688 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T77 23543-23560 Body_part denotes connective tissue http://purl.obolibrary.org/obo/UBERON_0002384
T78 23554-23560 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T79 24051-24075 Body_part denotes renin-angiotensin system http://purl.obolibrary.org/obo/UBERON_0018229
T80 24077-24080 Body_part denotes RAS http://purl.obolibrary.org/obo/UBERON_0018229
T81 24125-24128 Body_part denotes RAS http://purl.obolibrary.org/obo/UBERON_0018229
T82 24148-24151 Body_part denotes RAS http://purl.obolibrary.org/obo/UBERON_0018229
T83 24769-24773 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T84 24971-24976 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T85 26465-26469 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T86 26669-26673 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T87 26674-26680 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T88 27157-27161 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T89 28045-28051 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T90 28223-28227 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T91 28867-28872 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
4 64-72 Species denotes patients Tax:9606
5 40-54 Disease denotes critically ill MESH:D016638
6 55-63 Disease denotes COVID-19 MESH:C000657245
7 115-137 Disease denotes invasive aspergillosis MESH:D055744
10 214-222 Species denotes patients Tax:9606
11 205-213 Disease denotes COVID-19 MESH:C000657245
15 362-370 Species denotes patients Tax:9606
16 376-384 Disease denotes COVID-19 MESH:C000657245
17 393-397 Disease denotes ARDS MESH:D012128
32 543-551 Species denotes Patients Tax:9606
33 781-789 Species denotes patients Tax:9606
34 856-864 Species denotes patients Tax:9606
35 938-946 Species denotes patients Tax:9606
36 1187-1195 Species denotes patients Tax:9606
37 803-816 Chemical denotes galactomannan MESH:C012990
38 754-772 Disease denotes pulmonary embolism MESH:D011655
39 877-885 Disease denotes COVID-19 MESH:C000657245
40 897-920 Disease denotes pulmonary aspergillosis MESH:D055732
41 1116-1125 Disease denotes pneumonia MESH:D011014
42 1135-1150 Disease denotes alveolar damage MESH:D055370
43 1152-1160 Disease denotes fibrosis MESH:D005355
44 1210-1219 Disease denotes pneumonia MESH:D011014
45 1270-1292 Disease denotes invasive aspergillosis MESH:D055744
55 1378-1386 Species denotes patients Tax:9606
56 1530-1538 Species denotes patients Tax:9606
57 1357-1371 Disease denotes critically ill MESH:D016638
58 1372-1377 Disease denotes COVID MESH:C000657245
59 1463-1472 Disease denotes pneumonia MESH:D011014
60 1521-1529 Disease denotes COVID-19 MESH:C000657245
61 1553-1561 Disease denotes COVID-19 MESH:C000657245
62 1573-1596 Disease denotes pulmonary aspergillosis MESH:D055732
63 1622-1644 Disease denotes invasive aspergillosis MESH:D055744
69 1765-1773 Species denotes patients Tax:9606
70 1670-1678 Disease denotes COVID-19 MESH:C000657245
71 1690-1713 Disease denotes pulmonary aspergillosis MESH:D055732
72 1751-1759 Disease denotes COVID-19 MESH:C000657245
73 1760-1764 Disease denotes ARDS MESH:D012128
77 1827-1835 Species denotes patients Tax:9606
78 1806-1820 Disease denotes critically ill MESH:D016638
79 1821-1826 Disease denotes COVID MESH:C000657245
83 1868-1876 Disease denotes COVID-19 MESH:C000657245
84 1885-1889 Disease denotes ARDS MESH:D012128
85 1901-1910 Disease denotes pneumonia MESH:D011014
119 2027-2035 Species denotes patients Tax:9606
120 2157-2165 Species denotes patients Tax:9606
121 2443-2451 Species denotes patients Tax:9606
122 2999-3007 Species denotes patients Tax:9606
123 3115-3123 Species denotes patients Tax:9606
124 3401-3409 Species denotes patients Tax:9606
125 3773-3781 Species denotes patients Tax:9606
126 1991-2015 Disease denotes coronavirus disease 2019 MESH:C000657245
127 2017-2025 Disease denotes COVID-19 MESH:C000657245
128 2109-2128 Disease denotes respiratory failure MESH:D012131
129 2292-2327 Disease denotes acute respiratory distress syndrome MESH:D012128
130 2329-2333 Disease denotes ARDS MESH:D012128
131 2434-2442 Disease denotes COVID-19 MESH:C000657245
132 2524-2528 Disease denotes ARDS MESH:D012128
133 2859-2873 Disease denotes thromboembolic MESH:D013923
134 2904-2917 Disease denotes aspergillosis MESH:D001228
135 2947-2969 Disease denotes venous thromboembolism MESH:D054556
136 2990-2998 Disease denotes COVID-19 MESH:C000657245
137 3042-3065 Disease denotes pulmonary aspergillosis MESH:D055732
138 3106-3114 Disease denotes COVID-19 MESH:C000657245
139 3153-3161 Disease denotes COVID-19 MESH:C000657245
140 3170-3174 Disease denotes ARDS MESH:D012128
141 3235-3239 Disease denotes ARDS MESH:D012128
142 3300-3318 Disease denotes infectious disease MESH:D003141
143 3392-3400 Disease denotes COVID-19 MESH:C000657245
144 3423-3438 Disease denotes alveolar damage MESH:D055370
145 3459-3463 Disease denotes ARDS MESH:D012128
146 3510-3518 Disease denotes COVID-19 MESH:C000657245
147 3530-3553 Disease denotes pulmonary aspergillosis MESH:D055732
148 3630-3639 Disease denotes mortality MESH:D003643
149 3788-3793 Disease denotes COVID MESH:C000657245
150 3802-3806 Disease denotes ARDS MESH:D012128
151 4032-4040 Disease denotes COVID-19 MESH:C000657245
171 4138-4146 Species denotes patients Tax:9606
172 4173-4220 Species denotes severe acute respiratory syndrome coronavirus 2 Tax:2697049
173 4222-4232 Species denotes SARS-COV-2 Tax:2697049
174 4447-4457 Species denotes SARS-CoV-2 Tax:2697049
175 5501-5509 Species denotes patients Tax:9606
176 5646-5657 Species denotes Aspergillus Tax:746128
177 4685-4696 Chemical denotes chloroquine MESH:D002738
178 4872-4879 Chemical denotes heparin MESH:D006493
179 4881-4885 Chemical denotes LMWH MESH:D006495
180 4888-4898 Chemical denotes nadroparin MESH:D017762
181 5162-5175 Chemical denotes galactomannan MESH:C012990
182 5231-5244 Chemical denotes galactomannan MESH:C012990
183 5246-5248 Chemical denotes GM MESH:C012990
184 5600-5602 Chemical denotes GM MESH:C012990
185 4277-4296 Disease denotes respiratory failure MESH:D012131
186 4976-4999 Disease denotes pulmonary aspergillosis MESH:D055732
187 5061-5084 Disease denotes Pulmonary aspergillosis MESH:D055732
188 5405-5428 Disease denotes pulmonary aspergillosis MESH:D055732
189 5561-5570 Disease denotes infection MESH:D007239
197 5755-5763 Species denotes patients Tax:9606
198 6094-6102 Chemical denotes formalin MESH:D005557
199 6116-6124 Chemical denotes paraffin MESH:D010232
200 6154-6165 Chemical denotes Hematoxylin MESH:D006416
201 6170-6175 Chemical denotes eosin MESH:D004801
202 6177-6180 Chemical denotes H&E
203 6187-6200 Chemical denotes periodic acid MESH:D010504
205 6355-6362 Species denotes patient Tax:9606
219 8495-8516 Species denotes Aspergillus fumigatus Tax:746128
220 8677-8698 Species denotes Aspergillus fumigatus Tax:746128
221 8699-8719 Species denotes Enterococcus faecium Tax:1352
222 8796-8816 Species denotes Enterococcus faecium Tax:1352
223 8971-8992 Species denotes Enterococcus faecalis Tax:1351
224 8241-8243 Chemical denotes GM MESH:C012990
225 8292-8303 Chemical denotes Chloroquine MESH:D002738
226 8304-8316 Chemical denotes Prednisolone MESH:D011239
227 8359-8371 Chemical denotes prednisolone MESH:D011239
228 8656-8658 Chemical denotes GM MESH:C012990
229 8774-8776 Chemical denotes GM MESH:C012990
230 8202-8206 Disease denotes ARDS MESH:D012128
231 8853-8855 Disease denotes DM MESH:D009223
233 8052-8059 Species denotes Patient Tax:9606
244 9139-9142 Gene denotes CKI Gene:1119
245 9190-9192 Chemical denotes GM MESH:C012990
246 9017-9057 Disease denotes ARDS acute respiratory distress syndrome MESH:D012128
247 9094-9102 Disease denotes COVID-19 MESH:C000657245
248 9114-9137 Disease denotes pulmonary aspergillosis MESH:D055732
249 9144-9165 Disease denotes chronic kidney injury MESH:D051436
250 9167-9169 Disease denotes DM MESH:D009223
251 9171-9188 Disease denotes diabetes mellitus MESH:D003920
252 9213-9225 Disease denotes hypertension MESH:D006973
253 9230-9248 Disease denotes pulmonary embolism MESH:D011655
263 9578-9589 Disease denotes hyperplasia MESH:D006965
264 9750-9784 Disease denotes subsegmental PE Extensive fibrosis MESH:D005355
265 9826-9837 Disease denotes hyperplasia MESH:D006965
266 9919-9927 Disease denotes Fibrosis MESH:D005355
267 10100-10111 Disease denotes hyperplasia MESH:D006965
268 10419-10430 Disease denotes hyperplasia MESH:D006965
269 10607-10618 Disease denotes hyperplasia MESH:D006965
270 10821-10832 Disease denotes hyperplasia MESH:D006965
271 11087-11098 Disease denotes hyperplasia MESH:D006965
276 11219-11228 Disease denotes pneumonia MESH:D011014
277 11242-11257 Disease denotes alveolar damage MESH:D055370
278 11302-11311 Disease denotes pneumonia MESH:D011014
279 11316-11334 Disease denotes pulmonary embolism MESH:D011655
304 6596-6604 Species denotes patients Tax:9606
305 6659-6667 Species denotes Patients Tax:9606
306 6725-6733 Species denotes patients Tax:9606
307 6757-6765 Species denotes patients Tax:9606
308 6816-6823 Species denotes patient Tax:9606
309 7076-7084 Species denotes Patients Tax:9606
310 7160-7168 Species denotes patients Tax:9606
311 7287-7295 Species denotes patients Tax:9606
312 7501-7509 Species denotes patients Tax:9606
313 7678-7686 Species denotes patients Tax:9606
314 8012-8020 Species denotes patients Tax:9606
315 7394-7402 Species denotes patients Tax:9606
316 6916-6928 Chemical denotes prednisolone MESH:D011239
317 7440-7452 Chemical denotes voriconazole MESH:D065819
318 7457-7470 Chemical denotes anidulafungin MESH:D000077612
319 7541-7553 Chemical denotes prednisolone MESH:D011239
320 7651-7658 Chemical denotes steroid MESH:D013256
321 7891-7898 Chemical denotes steroid MESH:D013256
322 6793-6810 Disease denotes pulmonary disease MESH:D008171
323 7197-7215 Disease denotes pulmonary embolism MESH:D011655
324 7720-7729 Disease denotes pneumonia MESH:D011014
325 7769-7777 Disease denotes fibrosis MESH:D005355
326 7779-7800 Disease denotes Nosocomial infections MESH:D003428
327 7821-7844 Disease denotes pulmonary aspergillosis MESH:D055732
330 11791-11798 Species denotes patient Tax:9606
331 12015-12019 Chemical denotes dens MESH:D004052
334 11436-11444 Species denotes patients Tax:9606
335 11716-11724 Species denotes patients Tax:9606
337 12600-12609 Disease denotes pneumonia MESH:D011014
351 13005-13012 Species denotes patient Tax:9606
352 13419-13426 Species denotes Patient Tax:9606
353 13588-13595 Species denotes patient Tax:9606
354 13294-13298 Chemical denotes dens MESH:D004052
355 12739-12747 Disease denotes weakness MESH:D018908
356 12749-12754 Disease denotes fever MESH:D005334
357 12759-12767 Disease denotes dyspnoea MESH:D004417
358 13073-13092 Disease denotes acute renal failure MESH:D058186
359 13213-13229 Disease denotes pulmonary emboli MESH:D011655
360 13362-13382 Disease denotes nosocomial infection MESH:D003428
361 13481-13495 Disease denotes brain ischemia MESH:D002545
362 13503-13513 Disease denotes infarction MESH:D007238
363 13596-13600 Disease denotes died MESH:D003643
369 14501-14510 Disease denotes pneumonia MESH:D011014
370 14579-14587 Disease denotes fibrosis MESH:D005355
371 14728-14743 Disease denotes alveolar damage MESH:D055370
372 14920-14935 Disease denotes viral infection MESH:D001102
373 14955-14966 Disease denotes hyperplasia MESH:D006965
375 14260-14269 Species denotes SARS-CoV2 Tax:2697049
377 15065-15073 Disease denotes Fibrosis MESH:D005355
394 16208-16229 Species denotes Aspergillus fumigatus Tax:746128
395 16609-16616 Species denotes patient Tax:9606
396 17035-17042 Species denotes patient Tax:9606
397 15660-15672 Chemical denotes prednisolone MESH:D011239
398 16023-16025 Chemical denotes GM MESH:C012990
399 16242-16254 Chemical denotes prednisolone MESH:D011239
400 15230-15239 Disease denotes diarrhoea MESH:D003967
401 15244-15263 Disease denotes shortness of breath MESH:D004417
402 15636-15640 Disease denotes ARDS MESH:D012128
403 15772-15788 Disease denotes pulmonary emboli MESH:D011655
404 16075-16084 Disease denotes infection MESH:D007239
405 16373-16382 Disease denotes epileptic MESH:D004827
406 16415-16426 Disease denotes haemorrhage MESH:D006470
407 16496-16516 Disease denotes cerebral haemorrhage MESH:D002543
408 16837-16845 Disease denotes fibrosis MESH:D005355
409 17046-17064 Disease denotes pulmonary fibrosis MESH:D011658
411 17089-17104 Disease denotes alveolar damage MESH:D055370
423 18235-18242 Species denotes patient Tax:9606
424 18409-18416 Species denotes patient Tax:9606
425 17975-17987 Chemical denotes prednisolone MESH:D011239
426 18017-18029 Chemical denotes prednisolone MESH:D011239
427 17198-17207 Disease denotes hypoxemia MESH:D000860
428 17270-17286 Disease denotes pulmonary emboli MESH:D011655
429 17640-17656 Disease denotes pulmonary emboli MESH:D011655
430 17854-17865 Disease denotes lung injury MESH:D055370
431 17942-17950 Disease denotes fibrosis MESH:D005355
432 18284-18292 Disease denotes ischemia MESH:D007511
433 18313-18324 Disease denotes haemorrhage MESH:D006470
435 19047-19062 Disease denotes alveolar damage MESH:D055370
437 19110-19119 Disease denotes pneumonia MESH:D011014
450 19264-19271 Species denotes Patient Tax:9606
451 19474-19495 Species denotes Aspergillus fumigatus Tax:746128
452 19864-19871 Species denotes patient Tax:9606
453 20152-20159 Species denotes patient Tax:9606
454 19500-19512 Species denotes Enterococcus Tax:1351
455 19458-19460 Chemical denotes GM MESH:C012990
456 19166-19189 Disease denotes cardiopulmonary disease MESH:D006323
457 19244-19249 Disease denotes fever MESH:D005334
458 19254-19262 Disease denotes dyspnoea MESH:D004417
459 19405-19414 Disease denotes infection MESH:D007239
460 19615-19631 Disease denotes pulmonary emboli MESH:D011655
461 19959-19988 Disease denotes bilateral cerebellar ischemia MESH:D007511
466 20243-20254 Disease denotes lung injury MESH:D055370
467 20393-20402 Disease denotes pneumonia MESH:D011014
468 20561-20570 Disease denotes pneumonia MESH:D011014
469 20985-20994 Disease denotes pneumonia MESH:D011014
483 21084-21091 Species denotes patient Tax:9606
484 21263-21271 Species denotes patients Tax:9606
485 21400-21408 Species denotes patients Tax:9606
486 21571-21579 Species denotes patients Tax:9606
487 21641-21649 Species denotes patients Tax:9606
488 21795-21803 Species denotes patients Tax:9606
489 21059-21073 Disease denotes critically ill MESH:D016638
490 21078-21083 Disease denotes COVID MESH:C000657245
491 21228-21236 Disease denotes fibrosis MESH:D005355
492 21286-21295 Disease denotes pneumonia MESH:D011014
493 21391-21399 Disease denotes COVID-19 MESH:C000657245
494 21562-21570 Disease denotes COVID-19 MESH:C000657245
495 21693-21702 Disease denotes pneumonia MESH:D011014
508 22398-22406 Species denotes patients Tax:9606
509 22537-22545 Species denotes patients Tax:9606
510 22935-22943 Species denotes patients Tax:9606
511 22976-22984 Species denotes patients Tax:9606
512 23042-23049 Species denotes patient Tax:9606
513 23151-23159 Species denotes patients Tax:9606
514 22546-22550 Disease denotes died MESH:D003643
515 22684-22695 Disease denotes lung injury MESH:D055370
516 22707-22723 Disease denotes viral infections MESH:D001102
517 22786-22796 Disease denotes infections MESH:D007239
518 22832-22864 Disease denotes Middle East Respiratory Syndrome MESH:D018352
519 22949-22954 Disease denotes COVID MESH:C000657245
540 23624-23658 Gene denotes Vascular endothelial growth factor Gene:7422
541 23660-23664 Gene denotes VEGF Gene:7422
542 23670-23700 Gene denotes basic fibroblast growth factor Gene:2247
543 23702-23706 Gene denotes bFGF Gene:2247
544 23868-23872 Gene denotes ACE2 Gene:59272
545 23992-23996 Gene denotes ACE2 Gene:59272
546 24014-24019 Gene denotes ACE 2 Gene:59272
547 24104-24108 Gene denotes ACE2 Gene:59272
548 24191-24195 Gene denotes ACE2 Gene:59272
549 24242-24246 Gene denotes VEGF Gene:7422
550 24277-24281 Gene denotes ACE2 Gene:59272
551 24324-24328 Gene denotes ACE2 Gene:59272
552 23927-23937 Species denotes SARS-CoV-2 Tax:2697049
553 24310-24320 Species denotes SARS-CO-V2 Tax:2697049
554 23332-23358 Disease denotes alveolar epithelial injury MESH:D002277
555 23373-23390 Disease denotes epithelial injury MESH:D002277
556 23742-23751 Disease denotes pneumonia MESH:D011014
557 23826-23835 Disease denotes pneumonia MESH:D011014
558 24370-24377 Disease denotes COVID19 MESH:C000657245
559 24397-24406 Disease denotes pneumonia MESH:D011014
565 24511-24519 Species denotes patients Tax:9606
566 24529-24540 Chemical denotes chloroquine MESH:D002738
567 24653-24664 Chemical denotes chloroquine MESH:D002738
568 24688-24712 Disease denotes cardiovascular disorders MESH:D002318
569 24756-24781 Disease denotes interstitial lung disease MESH:D017563
577 25001-25009 Species denotes patients Tax:9606
578 25512-25520 Chemical denotes steroids MESH:D013256
579 25244-25253 Disease denotes pneumonia MESH:D011014
580 25265-25286 Disease denotes nosocomial infections MESH:D003428
581 25583-25603 Disease denotes SARS-CoV-2 pneumonia MESH:C000657245
582 25649-25656 Disease denotes COVID19 MESH:C000657245
583 25676-25685 Disease denotes pneumonia MESH:D011014
605 26610-26613 Gene denotes CD4 Gene:920
606 26622-26625 Gene denotes CD8 Gene:925
607 25804-25812 Species denotes patients Tax:9606
608 26142-26150 Species denotes patients Tax:9606
609 26867-26875 Species denotes patients Tax:9606
610 25898-25905 Chemical denotes steroid MESH:D013256
611 27015-27028 Chemical denotes galactomannan MESH:C012990
612 25775-25794 Disease denotes secondary infection MESH:D060085
613 25798-25803 Disease denotes COVID MESH:C000657245
614 25818-25851 Disease denotes invasive aspergillus co-infection MESH:D060085
615 25945-25977 Disease denotes invasive pulmonary aspergillosis MESH:D055744
616 26093-26102 Disease denotes pneumonia MESH:D011014
617 26188-26207 Disease denotes respiratory failure MESH:D012131
618 26218-26227 Disease denotes mortality MESH:D003643
619 26243-26251 Disease denotes COVID-19 MESH:C000657245
620 26263-26286 Disease denotes pulmonary aspergillosis MESH:D055732
621 26465-26476 Disease denotes lung damage MESH:D008171
622 26642-26661 Disease denotes Secondary infection MESH:D060085
623 26858-26866 Disease denotes COVID-19 MESH:C000657245
624 26928-26936 Disease denotes COVID-19 MESH:C000657245
625 26948-26971 Disease denotes pulmonary aspergillosis MESH:D055732
637 27279-27287 Species denotes patients Tax:9606
638 27335-27343 Species denotes patients Tax:9606
639 27580-27588 Species denotes patients Tax:9606
640 27913-27920 Chemical denotes steroid MESH:D013256
641 27194-27216 Disease denotes invasive aspergillosis MESH:D055744
642 27239-27271 Disease denotes invasive pulmonary aspergillosis MESH:D055744
643 27378-27400 Disease denotes invasive aspergillosis MESH:D055744
644 27457-27463 Disease denotes deaths MESH:D003643
645 27524-27536 Disease denotes septic shock MESH:D012772
646 27549-27562 Disease denotes aspergillosis MESH:D001228
647 27717-27752 Disease denotes respiratory conditions deteriorated MESH:D012131
650 28386-28394 Disease denotes COVID-19 MESH:C000657245
651 28478-28498 Disease denotes SARS-CoV-2 infection MESH:C000657245
664 28728-28736 Species denotes patients Tax:9606
665 29164-29172 Species denotes patients Tax:9606
666 28643-28651 Disease denotes COVID-19 MESH:C000657245
667 28652-28656 Disease denotes ARDS MESH:D012128
668 28714-28722 Disease denotes COVID-19 MESH:C000657245
669 28723-28727 Disease denotes ARDS MESH:D012128
670 28922-28935 Disease denotes aspergillosis MESH:D001228
671 29107-29115 Disease denotes COVID-19 MESH:C000657245
672 29124-29128 Disease denotes ARDS MESH:D012128
673 29212-29219 Disease denotes COVID19 MESH:C000657245
674 29334-29341 Disease denotes COVID19 MESH:C000657245
675 29353-29376 Disease denotes pulmonary aspergillosis MESH:D055732

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T1 55-63 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T2 115-137 Disease denotes invasive aspergillosis http://purl.obolibrary.org/obo/MONDO_0000240
T3 124-137 Disease denotes aspergillosis http://purl.obolibrary.org/obo/MONDO_0005657
T4 205-213 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T5 376-384 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T6 393-397 Disease denotes ARDS http://purl.obolibrary.org/obo/MONDO_0006502
T7 754-772 Disease denotes pulmonary embolism http://purl.obolibrary.org/obo/MONDO_0005279
T8 877-885 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T9 907-920 Disease denotes aspergillosis http://purl.obolibrary.org/obo/MONDO_0005657
T10 1105-1125 Disease denotes organizing pneumonia http://purl.obolibrary.org/obo/MONDO_0015265|http://purl.obolibrary.org/obo/MONDO_0056821
T12 1116-1125 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T13 1199-1219 Disease denotes organizing pneumonia http://purl.obolibrary.org/obo/MONDO_0015265|http://purl.obolibrary.org/obo/MONDO_0056821
T15 1210-1219 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T16 1270-1292 Disease denotes invasive aspergillosis http://purl.obolibrary.org/obo/MONDO_0000240
T17 1279-1292 Disease denotes aspergillosis http://purl.obolibrary.org/obo/MONDO_0005657
T18 1452-1472 Disease denotes organizing pneumonia http://purl.obolibrary.org/obo/MONDO_0015265|http://purl.obolibrary.org/obo/MONDO_0056821
T20 1463-1472 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T21 1521-1529 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T22 1553-1561 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T23 1583-1596 Disease denotes aspergillosis http://purl.obolibrary.org/obo/MONDO_0005657
T24 1622-1644 Disease denotes invasive aspergillosis http://purl.obolibrary.org/obo/MONDO_0000240
T25 1631-1644 Disease denotes aspergillosis http://purl.obolibrary.org/obo/MONDO_0005657
T26 1670-1678 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T27 1700-1713 Disease denotes aspergillosis http://purl.obolibrary.org/obo/MONDO_0005657
T28 1751-1759 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T29 1760-1764 Disease denotes ARDS http://purl.obolibrary.org/obo/MONDO_0006502
T30 1868-1876 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T31 1885-1889 Disease denotes ARDS http://purl.obolibrary.org/obo/MONDO_0006502
T32 1890-1910 Disease denotes organizing pneumonia http://purl.obolibrary.org/obo/MONDO_0015265|http://purl.obolibrary.org/obo/MONDO_0056821
T34 1901-1910 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T35 1991-2015 Disease denotes coronavirus disease 2019 http://purl.obolibrary.org/obo/MONDO_0100096
T36 2017-2025 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T37 2109-2128 Disease denotes respiratory failure http://purl.obolibrary.org/obo/MONDO_0021113
T38 2292-2327 Disease denotes acute respiratory distress syndrome http://purl.obolibrary.org/obo/MONDO_0006502
T39 2298-2327 Disease denotes respiratory distress syndrome http://purl.obolibrary.org/obo/MONDO_0009971
T40 2329-2333 Disease denotes ARDS http://purl.obolibrary.org/obo/MONDO_0006502
T41 2434-2442 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T42 2524-2528 Disease denotes ARDS http://purl.obolibrary.org/obo/MONDO_0006502
T43 2904-2917 Disease denotes aspergillosis http://purl.obolibrary.org/obo/MONDO_0005657
T44 2947-2969 Disease denotes venous thromboembolism http://purl.obolibrary.org/obo/MONDO_0005399
T45 2990-2998 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T46 3052-3065 Disease denotes aspergillosis http://purl.obolibrary.org/obo/MONDO_0005657
T47 3106-3114 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T48 3153-3161 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T49 3170-3174 Disease denotes ARDS http://purl.obolibrary.org/obo/MONDO_0006502
T50 3235-3239 Disease denotes ARDS http://purl.obolibrary.org/obo/MONDO_0006502
T51 3300-3318 Disease denotes infectious disease http://purl.obolibrary.org/obo/MONDO_0005550
T52 3392-3400 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T53 3459-3463 Disease denotes ARDS http://purl.obolibrary.org/obo/MONDO_0006502
T54 3510-3518 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T55 3540-3553 Disease denotes aspergillosis http://purl.obolibrary.org/obo/MONDO_0005657
T56 3555-3559 Disease denotes CAPA http://purl.obolibrary.org/obo/MONDO_0007163
T57 3693-3697 Disease denotes CAPA http://purl.obolibrary.org/obo/MONDO_0007163
T58 3802-3806 Disease denotes ARDS http://purl.obolibrary.org/obo/MONDO_0006502
T59 4032-4040 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T60 4173-4220 Disease denotes severe acute respiratory syndrome coronavirus 2 http://purl.obolibrary.org/obo/MONDO_0100096
T61 4173-4206 Disease denotes severe acute respiratory syndrome http://purl.obolibrary.org/obo/MONDO_0005091
T62 4222-4226 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T63 4277-4296 Disease denotes respiratory failure http://purl.obolibrary.org/obo/MONDO_0021113
T64 4447-4455 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T65 4986-4999 Disease denotes aspergillosis http://purl.obolibrary.org/obo/MONDO_0005657
T66 5071-5084 Disease denotes aspergillosis http://purl.obolibrary.org/obo/MONDO_0005657
T67 5384-5393 Disease denotes influenza http://purl.obolibrary.org/obo/MONDO_0005812
T68 5415-5428 Disease denotes aspergillosis http://purl.obolibrary.org/obo/MONDO_0005657
T69 5515-5519 Disease denotes CAPA http://purl.obolibrary.org/obo/MONDO_0007163
T70 5561-5570 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T71 6223-6226 Disease denotes PAS http://purl.obolibrary.org/obo/MONDO_0004277
T72 6793-6810 Disease denotes pulmonary disease http://purl.obolibrary.org/obo/MONDO_0005275
T73 7197-7215 Disease denotes pulmonary embolism http://purl.obolibrary.org/obo/MONDO_0005279
T74 7253-7257 Disease denotes CAPA http://purl.obolibrary.org/obo/MONDO_0007163
T75 7331-7335 Disease denotes CAPA http://purl.obolibrary.org/obo/MONDO_0007163
T76 7576-7580 Disease denotes CAPA http://purl.obolibrary.org/obo/MONDO_0007163
T77 7709-7729 Disease denotes organizing pneumonia http://purl.obolibrary.org/obo/MONDO_0015265|http://purl.obolibrary.org/obo/MONDO_0056821
T79 7720-7729 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T80 7779-7800 Disease denotes Nosocomial infections http://purl.obolibrary.org/obo/MONDO_0043544
T81 7831-7844 Disease denotes aspergillosis http://purl.obolibrary.org/obo/MONDO_0005657
T82 8202-8206 Disease denotes ARDS http://purl.obolibrary.org/obo/MONDO_0006502
T83 8287-8291 Disease denotes CAPA http://purl.obolibrary.org/obo/MONDO_0007163
T84 8853-8855 Disease denotes DM http://purl.obolibrary.org/obo/MONDO_0005015|http://purl.obolibrary.org/obo/MONDO_0016367
T86 9017-9021 Disease denotes ARDS http://purl.obolibrary.org/obo/MONDO_0006502
T87 9022-9057 Disease denotes acute respiratory distress syndrome http://purl.obolibrary.org/obo/MONDO_0006502
T88 9028-9057 Disease denotes respiratory distress syndrome http://purl.obolibrary.org/obo/MONDO_0009971
T89 9088-9092 Disease denotes CAPA http://purl.obolibrary.org/obo/MONDO_0007163
T90 9094-9102 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T91 9124-9137 Disease denotes aspergillosis http://purl.obolibrary.org/obo/MONDO_0005657
T92 9159-9165 Disease denotes injury http://purl.obolibrary.org/obo/MONDO_0021178
T93 9167-9169 Disease denotes DM http://purl.obolibrary.org/obo/MONDO_0005015|http://purl.obolibrary.org/obo/MONDO_0016367
T95 9171-9188 Disease denotes diabetes mellitus http://purl.obolibrary.org/obo/MONDO_0005015
T96 9213-9225 Disease denotes hypertension http://purl.obolibrary.org/obo/MONDO_0005044
T97 9230-9248 Disease denotes pulmonary embolism http://purl.obolibrary.org/obo/MONDO_0005279
T98 9578-9589 Disease denotes hyperplasia http://purl.obolibrary.org/obo/MONDO_0005043
T99 9671-9673 Disease denotes OP http://purl.obolibrary.org/obo/MONDO_0015265
T100 9720-9734 Disease denotes bronchiectasis http://purl.obolibrary.org/obo/MONDO_0004822
T101 9826-9837 Disease denotes hyperplasia http://purl.obolibrary.org/obo/MONDO_0005043
T102 9966-9980 Disease denotes bronchiectasis http://purl.obolibrary.org/obo/MONDO_0004822
T103 10100-10111 Disease denotes hyperplasia http://purl.obolibrary.org/obo/MONDO_0005043
T104 10247-10261 Disease denotes bronchiectasis http://purl.obolibrary.org/obo/MONDO_0004822
T105 10419-10430 Disease denotes hyperplasia http://purl.obolibrary.org/obo/MONDO_0005043
T106 10607-10618 Disease denotes hyperplasia http://purl.obolibrary.org/obo/MONDO_0005043
T107 10700-10702 Disease denotes OP http://purl.obolibrary.org/obo/MONDO_0015265
T108 10821-10832 Disease denotes hyperplasia http://purl.obolibrary.org/obo/MONDO_0005043
T109 10914-10916 Disease denotes OP http://purl.obolibrary.org/obo/MONDO_0015265
T110 10953-10967 Disease denotes bronchiectasis http://purl.obolibrary.org/obo/MONDO_0004822
T111 11087-11098 Disease denotes hyperplasia http://purl.obolibrary.org/obo/MONDO_0005043
T112 11180-11182 Disease denotes OP http://purl.obolibrary.org/obo/MONDO_0015265
T113 11208-11228 Disease denotes organizing pneumonia http://purl.obolibrary.org/obo/MONDO_0015265|http://purl.obolibrary.org/obo/MONDO_0056821
T115 11219-11228 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T116 11288-11290 Disease denotes OP http://purl.obolibrary.org/obo/MONDO_0015265
T117 11291-11311 Disease denotes organizing pneumonia http://purl.obolibrary.org/obo/MONDO_0015265|http://purl.obolibrary.org/obo/MONDO_0056821
T119 11302-11311 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T120 11316-11334 Disease denotes pulmonary embolism http://purl.obolibrary.org/obo/MONDO_0005279
T121 12134-12148 Disease denotes bronchiectasis http://purl.obolibrary.org/obo/MONDO_0004822
T122 12289-12303 Disease denotes bronchiectasis http://purl.obolibrary.org/obo/MONDO_0004822
T123 12558-12572 Disease denotes bronchiectasis http://purl.obolibrary.org/obo/MONDO_0004822
T124 12589-12609 Disease denotes Organizing pneumonia http://purl.obolibrary.org/obo/MONDO_0015265|http://purl.obolibrary.org/obo/MONDO_0056821
T126 12600-12609 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T127 13073-13092 Disease denotes acute renal failure http://purl.obolibrary.org/obo/MONDO_0002492
T128 13079-13092 Disease denotes renal failure http://purl.obolibrary.org/obo/MONDO_0001106
T129 13362-13382 Disease denotes nosocomial infection http://purl.obolibrary.org/obo/MONDO_0043544
T130 13373-13382 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T131 13481-13495 Disease denotes brain ischemia http://purl.obolibrary.org/obo/MONDO_0005299
T132 13487-13495 Disease denotes ischemia http://purl.obolibrary.org/obo/MONDO_0005053
T133 14121-14129 Disease denotes thrombus http://purl.obolibrary.org/obo/MONDO_0000831
T134 14260-14264 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T135 14270-14279 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T136 14309-14312 Disease denotes PAS http://purl.obolibrary.org/obo/MONDO_0004277
T137 14371-14391 Disease denotes organizing pneumonia http://purl.obolibrary.org/obo/MONDO_0015265|http://purl.obolibrary.org/obo/MONDO_0056821
T139 14382-14391 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T140 14490-14510 Disease denotes organizing pneumonia http://purl.obolibrary.org/obo/MONDO_0015265|http://purl.obolibrary.org/obo/MONDO_0056821
T142 14501-14510 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T143 14836-14844 Disease denotes thrombus http://purl.obolibrary.org/obo/MONDO_0000831
T144 14920-14935 Disease denotes viral infection http://purl.obolibrary.org/obo/MONDO_0005108
T145 14926-14935 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T146 14955-14966 Disease denotes hyperplasia http://purl.obolibrary.org/obo/MONDO_0005043
T147 15230-15239 Disease denotes diarrhoea http://purl.obolibrary.org/obo/MONDO_0001673
T148 15494-15508 Disease denotes bronchiectasis http://purl.obolibrary.org/obo/MONDO_0004822
T149 15636-15640 Disease denotes ARDS http://purl.obolibrary.org/obo/MONDO_0006502
T150 15966-15980 Disease denotes bronchiectasis http://purl.obolibrary.org/obo/MONDO_0004822
T151 16068-16084 Disease denotes fungal infection http://purl.obolibrary.org/obo/MONDO_0002041
T152 16075-16084 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T153 16969-16972 Disease denotes PAS http://purl.obolibrary.org/obo/MONDO_0004277
T154 17046-17064 Disease denotes pulmonary fibrosis http://purl.obolibrary.org/obo/MONDO_0002771
T155 17859-17865 Disease denotes injury http://purl.obolibrary.org/obo/MONDO_0021178
T156 18284-18292 Disease denotes ischemia http://purl.obolibrary.org/obo/MONDO_0005053
T157 18937-18940 Disease denotes PAS http://purl.obolibrary.org/obo/MONDO_0004277
T158 19099-19119 Disease denotes organizing pneumonia http://purl.obolibrary.org/obo/MONDO_0015265|http://purl.obolibrary.org/obo/MONDO_0056821
T160 19110-19119 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T161 19166-19189 Disease denotes cardiopulmonary disease http://purl.obolibrary.org/obo/MONDO_0004596
T162 19405-19414 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T163 19832-19846 Disease denotes bronchiectasis http://purl.obolibrary.org/obo/MONDO_0004822
T164 19980-19988 Disease denotes ischemia http://purl.obolibrary.org/obo/MONDO_0005053
T165 20248-20254 Disease denotes injury http://purl.obolibrary.org/obo/MONDO_0021178
T166 20382-20402 Disease denotes organizing pneumonia http://purl.obolibrary.org/obo/MONDO_0015265|http://purl.obolibrary.org/obo/MONDO_0056821
T168 20393-20402 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T169 20550-20570 Disease denotes organizing pneumonia http://purl.obolibrary.org/obo/MONDO_0015265|http://purl.obolibrary.org/obo/MONDO_0056821
T171 20561-20570 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T172 20856-20859 Disease denotes PAS http://purl.obolibrary.org/obo/MONDO_0004277
T173 20974-20994 Disease denotes organizing pneumonia http://purl.obolibrary.org/obo/MONDO_0015265|http://purl.obolibrary.org/obo/MONDO_0056821
T175 20985-20994 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T176 21275-21295 Disease denotes organizing pneumonia http://purl.obolibrary.org/obo/MONDO_0015265|http://purl.obolibrary.org/obo/MONDO_0056821
T178 21286-21295 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T179 21297-21299 Disease denotes OP http://purl.obolibrary.org/obo/MONDO_0015265
T180 21391-21399 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T181 21562-21570 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T182 21682-21702 Disease denotes organizing pneumonia http://purl.obolibrary.org/obo/MONDO_0015265|http://purl.obolibrary.org/obo/MONDO_0056821
T184 21693-21702 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T185 21909-21911 Disease denotes OP http://purl.obolibrary.org/obo/MONDO_0015265
T186 22026-22028 Disease denotes OP http://purl.obolibrary.org/obo/MONDO_0015265
T187 22094-22096 Disease denotes OP http://purl.obolibrary.org/obo/MONDO_0015265
T188 22622-22624 Disease denotes OP http://purl.obolibrary.org/obo/MONDO_0015265
T189 22689-22695 Disease denotes injury http://purl.obolibrary.org/obo/MONDO_0021178
T190 22707-22723 Disease denotes viral infections http://purl.obolibrary.org/obo/MONDO_0005108
T191 22744-22746 Disease denotes OP http://purl.obolibrary.org/obo/MONDO_0015265
T192 22776-22785 Disease denotes influenza http://purl.obolibrary.org/obo/MONDO_0005812
T193 22786-22796 Disease denotes infections http://purl.obolibrary.org/obo/MONDO_0005550
T194 23270-23272 Disease denotes OP http://purl.obolibrary.org/obo/MONDO_0015265
T195 23309-23311 Disease denotes OP http://purl.obolibrary.org/obo/MONDO_0015265
T196 23352-23358 Disease denotes injury http://purl.obolibrary.org/obo/MONDO_0021178
T197 23384-23390 Disease denotes injury http://purl.obolibrary.org/obo/MONDO_0021178
T198 23731-23751 Disease denotes organizing pneumonia http://purl.obolibrary.org/obo/MONDO_0015265|http://purl.obolibrary.org/obo/MONDO_0056821
T200 23742-23751 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T201 23815-23835 Disease denotes organizing pneumonia http://purl.obolibrary.org/obo/MONDO_0015265|http://purl.obolibrary.org/obo/MONDO_0056821
T203 23826-23835 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T204 23927-23935 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T205 24310-24314 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T206 24370-24377 Disease denotes COVID19 http://purl.obolibrary.org/obo/MONDO_0100096
T207 24386-24406 Disease denotes organizing pneumonia http://purl.obolibrary.org/obo/MONDO_0015265|http://purl.obolibrary.org/obo/MONDO_0056821
T209 24397-24406 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T210 24456-24458 Disease denotes OP http://purl.obolibrary.org/obo/MONDO_0015265
T211 24688-24712 Disease denotes cardiovascular disorders http://purl.obolibrary.org/obo/MONDO_0004995
T212 24756-24781 Disease denotes interstitial lung disease http://purl.obolibrary.org/obo/MONDO_0015925
T213 24769-24781 Disease denotes lung disease http://purl.obolibrary.org/obo/MONDO_0005275
T214 24868-24870 Disease denotes OP http://purl.obolibrary.org/obo/MONDO_0015265
T215 24952-24954 Disease denotes OP http://purl.obolibrary.org/obo/MONDO_0015265
T216 25233-25253 Disease denotes organizing pneumonia http://purl.obolibrary.org/obo/MONDO_0015265|http://purl.obolibrary.org/obo/MONDO_0056821
T218 25244-25253 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T219 25265-25286 Disease denotes nosocomial infections http://purl.obolibrary.org/obo/MONDO_0043544
T220 25583-25591 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T221 25594-25603 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T222 25649-25656 Disease denotes COVID19 http://purl.obolibrary.org/obo/MONDO_0100096
T223 25665-25685 Disease denotes organizing pneumonia http://purl.obolibrary.org/obo/MONDO_0015265|http://purl.obolibrary.org/obo/MONDO_0056821
T225 25676-25685 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T226 25785-25794 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T227 25842-25851 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T228 25964-25977 Disease denotes aspergillosis http://purl.obolibrary.org/obo/MONDO_0005657
T229 26083-26092 Disease denotes influenza http://purl.obolibrary.org/obo/MONDO_0005812
T230 26093-26102 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T231 26164-26173 Disease denotes influenza http://purl.obolibrary.org/obo/MONDO_0005812
T232 26182-26207 Disease denotes acute respiratory failure http://purl.obolibrary.org/obo/MONDO_0001208|http://purl.obolibrary.org/obo/MONDO_0021113
T234 26243-26251 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T235 26273-26286 Disease denotes aspergillosis http://purl.obolibrary.org/obo/MONDO_0005657
T236 26288-26292 Disease denotes CAPA http://purl.obolibrary.org/obo/MONDO_0007163
T237 26418-26422 Disease denotes CAPA http://purl.obolibrary.org/obo/MONDO_0007163
T238 26448-26452 Disease denotes CAPA http://purl.obolibrary.org/obo/MONDO_0007163
T239 26652-26661 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T240 26729-26733 Disease denotes CAPA http://purl.obolibrary.org/obo/MONDO_0007163
T241 26858-26866 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T242 26928-26936 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T243 26958-26971 Disease denotes aspergillosis http://purl.obolibrary.org/obo/MONDO_0005657
T244 26973-26977 Disease denotes CAPA http://purl.obolibrary.org/obo/MONDO_0007163
T245 27122-27126 Disease denotes CAPA http://purl.obolibrary.org/obo/MONDO_0007163
T246 27194-27216 Disease denotes invasive aspergillosis http://purl.obolibrary.org/obo/MONDO_0000240
T247 27203-27216 Disease denotes aspergillosis http://purl.obolibrary.org/obo/MONDO_0005657
T248 27258-27271 Disease denotes aspergillosis http://purl.obolibrary.org/obo/MONDO_0005657
T249 27302-27306 Disease denotes CAPA http://purl.obolibrary.org/obo/MONDO_0007163
T250 27359-27363 Disease denotes CAPA http://purl.obolibrary.org/obo/MONDO_0007163
T251 27378-27400 Disease denotes invasive aspergillosis http://purl.obolibrary.org/obo/MONDO_0000240
T252 27387-27400 Disease denotes aspergillosis http://purl.obolibrary.org/obo/MONDO_0005657
T253 27471-27475 Disease denotes CAPA http://purl.obolibrary.org/obo/MONDO_0007163
T254 27549-27562 Disease denotes aspergillosis http://purl.obolibrary.org/obo/MONDO_0005657
T255 27808-27812 Disease denotes CAPA http://purl.obolibrary.org/obo/MONDO_0007163
T256 28386-28394 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T257 28478-28486 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T258 28489-28498 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T259 28643-28651 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T260 28652-28656 Disease denotes ARDS http://purl.obolibrary.org/obo/MONDO_0006502
T261 28714-28722 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T262 28723-28727 Disease denotes ARDS http://purl.obolibrary.org/obo/MONDO_0006502
T263 28811-28813 Disease denotes OP http://purl.obolibrary.org/obo/MONDO_0015265
T264 28922-28935 Disease denotes aspergillosis http://purl.obolibrary.org/obo/MONDO_0005657
T265 28983-28987 Disease denotes CAPA http://purl.obolibrary.org/obo/MONDO_0007163
T266 29107-29115 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T267 29124-29128 Disease denotes ARDS http://purl.obolibrary.org/obo/MONDO_0006502
T268 29212-29219 Disease denotes COVID19 http://purl.obolibrary.org/obo/MONDO_0100096
T269 29334-29341 Disease denotes COVID19 http://purl.obolibrary.org/obo/MONDO_0100096
T270 29363-29376 Disease denotes aspergillosis http://purl.obolibrary.org/obo/MONDO_0005657

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T1 139-140 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T2 339-343 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T3 339-343 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T4 589-594 http://purl.obolibrary.org/obo/UBERON_0003101 denotes males
T5 589-594 http://www.ebi.ac.uk/efo/EFO_0000970 denotes males
T6 603-610 http://purl.obolibrary.org/obo/UBERON_0003100 denotes females
T7 682-684 http://purl.obolibrary.org/obo/CLO_0001313 denotes 36
T8 696-697 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T9 922-927 http://www.ebi.ac.uk/efo/EFO_0000965 denotes Chest
T10 1105-1115 http://purl.obolibrary.org/obo/OBI_0000245 denotes organizing
T11 1199-1209 http://purl.obolibrary.org/obo/OBI_0000245 denotes organizing
T12 1452-1462 http://purl.obolibrary.org/obo/OBI_0000245 denotes organizing
T13 1890-1900 http://purl.obolibrary.org/obo/OBI_0000245 denotes organizing
T14 1914-1915 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T15 2142-2148 http://purl.obolibrary.org/obo/CLO_0001302 denotes 3], [4
T16 2255-2261 http://www.ebi.ac.uk/efo/EFO_0000965 denotes thorax
T17 2538-2542 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T18 2538-2542 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T19 2810-2811 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T20 3472-3474 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T21 3752-3756 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T22 3752-3756 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T23 4305-4307 http://purl.obolibrary.org/obo/CLO_0050507 denotes 22
T24 4393-4397 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T25 4393-4397 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T26 4646-4661 http://purl.obolibrary.org/obo/UBERON_0001555 denotes digestive tract
T27 4964-4971 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing
T28 5250-5257 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing
T29 5362-5363 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T30 5598-5599 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T31 5725-5729 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T32 5725-5729 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T33 5830-5835 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lungs
T34 5864-5868 http://purl.obolibrary.org/obo/UBERON_0002048 denotes Lung
T35 5864-5868 http://www.ebi.ac.uk/efo/EFO_0000934 denotes Lung
T36 5956-5957 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T37 5969-5970 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T38 6056-6061 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lungs
T39 6652-6657 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lungs
T40 6739-6743 http://purl.obolibrary.org/obo/UBERON_0003101 denotes male
T41 6739-6743 http://www.ebi.ac.uk/efo/EFO_0000970 denotes male
T42 6770-6771 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T43 6898-6899 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T44 7067-7069 http://purl.obolibrary.org/obo/CLO_0001313 denotes 36
T45 7118-7120 http://purl.obolibrary.org/obo/CLO_0001313 denotes 36
T46 7357-7358 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T47 7691-7692 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T48 7709-7719 http://purl.obolibrary.org/obo/OBI_0000245 denotes organizing
T49 7733-7738 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T50 7945-7950 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T51 7984-7989 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lungs
T52 8177-8183 http://purl.obolibrary.org/obo/CLO_0001929 denotes Berlin
T53 8744-8746 http://purl.obolibrary.org/obo/CLO_0004265 denotes HT
T54 8752-8754 http://purl.obolibrary.org/obo/CLO_0050507 denotes 22
T55 8843-8848 http://purl.obolibrary.org/obo/CLO_0007487 denotes M, 83
T56 8849-8851 http://purl.obolibrary.org/obo/CLO_0004265 denotes HT
T57 8895-8897 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T58 8928-8930 http://purl.obolibrary.org/obo/CLO_0001313 denotes 36
T59 8931-8933 http://purl.obolibrary.org/obo/CLO_0001313 denotes 36
T60 9152-9158 http://purl.obolibrary.org/obo/UBERON_0002113 denotes kidney
T61 9152-9158 http://www.ebi.ac.uk/efo/EFO_0000927 denotes kidney
T62 9152-9158 http://www.ebi.ac.uk/efo/EFO_0000929 denotes kidney
T63 9209-9211 http://purl.obolibrary.org/obo/CLO_0004265 denotes HT
T64 9271-9276 http://www.ebi.ac.uk/efo/EFO_0000965 denotes Chest
T65 9510-9522 http://purl.obolibrary.org/obo/CL_0000057 denotes fibroblastic
T66 9569-9576 http://purl.obolibrary.org/obo/UBERON_0000055 denotes vessels
T67 9624-9628 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T68 9872-9876 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T69 10031-10040 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membranes
T70 10066-10078 http://purl.obolibrary.org/obo/CL_0000057 denotes fibroblastic
T71 10146-10150 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T72 10308-10320 http://purl.obolibrary.org/obo/CL_0000057 denotes fibroblastic
T73 10334-10335 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T74 10465-10469 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T75 10565-10577 http://purl.obolibrary.org/obo/CL_0000057 denotes fibroblastic
T76 10653-10657 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T77 10751-10763 http://purl.obolibrary.org/obo/CL_0000057 denotes fibroblastic
T78 10867-10871 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T79 11012-11024 http://purl.obolibrary.org/obo/CL_0000057 denotes fibroblastic
T80 11033-11035 http://purl.obolibrary.org/obo/CLO_0050509 denotes 27
T81 11133-11137 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T82 11208-11218 http://purl.obolibrary.org/obo/OBI_0000245 denotes organizing
T83 11291-11301 http://purl.obolibrary.org/obo/OBI_0000245 denotes organizing
T84 11677-11682 http://www.ebi.ac.uk/efo/EFO_0000965 denotes Chest
T85 11754-11759 http://www.ebi.ac.uk/efo/EFO_0000965 denotes Chest
T86 11805-11806 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T87 11818-11823 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T88 11856-11857 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T89 11883-11888 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T90 12069-12071 http://purl.obolibrary.org/obo/CLO_0001236 denotes 2A
T91 12084-12089 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lungs
T92 12589-12599 http://purl.obolibrary.org/obo/OBI_0000245 denotes Organizing
T93 12610-12611 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T94 12624-12628 http://purl.obolibrary.org/obo/UBERON_0003101 denotes male
T95 12624-12628 http://www.ebi.ac.uk/efo/EFO_0000970 denotes male
T96 12777-12782 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T97 13185-13190 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T98 13360-13361 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T99 13467-13471 http://purl.obolibrary.org/obo/UBERON_0000033 denotes head
T100 13467-13471 http://www.ebi.ac.uk/efo/EFO_0000964 denotes head
T101 13481-13486 http://purl.obolibrary.org/obo/UBERON_0000955 denotes brain
T102 13481-13486 http://www.ebi.ac.uk/efo/EFO_0000302 denotes brain
T103 13557-13566 http://purl.obolibrary.org/obo/UBERON_0001353 denotes posterior
T104 13576-13582 http://purl.obolibrary.org/obo/UBERON_0001637 denotes artery
T105 13576-13582 http://www.ebi.ac.uk/efo/EFO_0000814 denotes artery
T106 13706-13710 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T107 13706-13710 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T108 13744-13745 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T109 13781-13793 http://purl.obolibrary.org/obo/CL_0000057 denotes fibroblastic
T110 13845-13856 http://purl.obolibrary.org/obo/CL_0000235 denotes histiocytes
T111 13863-13865 http://purl.obolibrary.org/obo/CLO_0001236 denotes 2A
T112 13891-13895 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T113 13891-13895 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T114 13965-13974 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membranes
T115 14049-14062 http://purl.obolibrary.org/obo/UBERON_0001981 denotes blood vessels
T116 14049-14062 http://www.ebi.ac.uk/efo/EFO_0000817 denotes blood vessels
T117 14110-14120 http://purl.obolibrary.org/obo/OBI_0000245 denotes organizing
T118 14133-14134 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T119 14148-14154 http://purl.obolibrary.org/obo/UBERON_0000055 denotes vessel
T120 14220-14230 http://purl.obolibrary.org/obo/CL_0000066 denotes epithelial
T121 14258-14259 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T122 14371-14381 http://purl.obolibrary.org/obo/OBI_0000245 denotes organizing
T123 14412-14416 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T124 14412-14416 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T125 14427-14428 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T126 14453-14465 http://purl.obolibrary.org/obo/CL_0000057 denotes fibroblastic
T127 14490-14500 http://purl.obolibrary.org/obo/OBI_0000245 denotes organizing
T128 14523-14524 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T129 14685-14694 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membranes
T130 14748-14753 http://purl.obolibrary.org/obo/CLO_0002850 denotes E, 20
T131 14855-14861 http://purl.obolibrary.org/obo/UBERON_0000055 denotes vessel
T132 14989-14994 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T133 15074-15075 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T134 15088-15094 http://purl.obolibrary.org/obo/UBERON_0003100 denotes female
T135 15153-15154 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T136 15278-15283 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T137 15548-15550 http://purl.obolibrary.org/obo/CLO_0001236 denotes 2A
T138 15734-15739 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T139 15796-15806 http://purl.obolibrary.org/obo/UBERON_0002167 denotes right lung
T140 15883-15884 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T141 16159-16160 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T142 16321-16325 http://purl.obolibrary.org/obo/UBERON_0000033 denotes head
T143 16321-16325 http://www.ebi.ac.uk/efo/EFO_0000964 denotes head
T144 16533-16537 http://purl.obolibrary.org/obo/UBERON_0000033 denotes head
T145 16533-16537 http://www.ebi.ac.uk/efo/EFO_0000964 denotes head
T146 16626-16628 http://purl.obolibrary.org/obo/CLO_0050509 denotes 27
T147 16686-16690 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T148 16686-16690 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T149 16752-16756 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T150 16752-16756 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T151 16915-16925 http://purl.obolibrary.org/obo/UBERON_0000483 denotes epithelium
T152 16931-16944 http://purl.obolibrary.org/obo/UBERON_0001981 denotes blood vessels
T153 16931-16944 http://www.ebi.ac.uk/efo/EFO_0000817 denotes blood vessels
T154 17105-17106 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T155 17119-17125 http://purl.obolibrary.org/obo/UBERON_0003100 denotes female
T156 17209-17214 http://www.ebi.ac.uk/efo/EFO_0000965 denotes Chest
T157 17588-17593 http://www.ebi.ac.uk/efo/EFO_0000965 denotes Chest
T158 17854-17858 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T159 17854-17858 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T160 18053-18054 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T161 18272-18276 http://purl.obolibrary.org/obo/UBERON_0000033 denotes head
T162 18272-18276 http://www.ebi.ac.uk/efo/EFO_0000964 denotes head
T163 18502-18506 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T164 18502-18506 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T165 18670-18671 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T166 18696-18708 http://purl.obolibrary.org/obo/CL_0000057 denotes fibroblastic
T167 18805-18814 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membranes
T168 19099-19109 http://purl.obolibrary.org/obo/OBI_0000245 denotes organizing
T169 19120-19121 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T170 19134-19138 http://purl.obolibrary.org/obo/UBERON_0003101 denotes male
T171 19134-19138 http://www.ebi.ac.uk/efo/EFO_0000970 denotes male
T172 19218-19219 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T173 19447-19448 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T174 19577-19582 http://www.ebi.ac.uk/efo/EFO_0000965 denotes Chest
T175 19937-19941 http://purl.obolibrary.org/obo/UBERON_0000033 denotes head
T176 19937-19941 http://www.ebi.ac.uk/efo/EFO_0000964 denotes head
T177 20230-20231 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T178 20243-20247 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T179 20243-20247 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T180 20334-20346 http://purl.obolibrary.org/obo/CL_0000057 denotes fibroblastic
T181 20382-20392 http://purl.obolibrary.org/obo/OBI_0000245 denotes organizing
T182 20413-20414 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T183 20550-20560 http://purl.obolibrary.org/obo/OBI_0000245 denotes organizing
T184 20603-20604 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T185 20736-20749 http://purl.obolibrary.org/obo/UBERON_0001981 denotes blood vessels
T186 20736-20749 http://www.ebi.ac.uk/efo/EFO_0000817 denotes blood vessels
T187 20795-20804 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membranes
T188 20974-20984 http://purl.obolibrary.org/obo/OBI_0000245 denotes organizing
T189 21275-21285 http://purl.obolibrary.org/obo/OBI_0000245 denotes organizing
T190 21469-21471 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T191 21498-21500 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T192 21603-21613 http://purl.obolibrary.org/obo/CLO_0001483 denotes 76% and 67
T193 21682-21692 http://purl.obolibrary.org/obo/OBI_0000245 denotes organizing
T194 21834-21844 http://purl.obolibrary.org/obo/OBI_0000245 denotes organizing
T195 21915-21919 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T196 21915-21919 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T197 21987-21996 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membranes
T198 22499-22501 http://purl.obolibrary.org/obo/CLO_0050507 denotes 22
T199 22567-22568 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T200 22684-22688 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T201 22684-22688 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T202 22811-22813 http://purl.obolibrary.org/obo/CLO_0050507 denotes 22
T203 23315-23316 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T204 23341-23351 http://purl.obolibrary.org/obo/CL_0000066 denotes epithelial
T205 23373-23383 http://purl.obolibrary.org/obo/CL_0000066 denotes epithelial
T206 23417-23423 http://purl.obolibrary.org/obo/UBERON_0001969 denotes plasma
T207 23445-23446 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T208 23516-23526 http://purl.obolibrary.org/obo/CL_0000057 denotes fibroblast
T209 23543-23560 http://purl.obolibrary.org/obo/UBERON_0002384 denotes connective tissue
T210 23543-23560 http://www.ebi.ac.uk/efo/EFO_0000952 denotes connective tissue
T211 23565-23575 http://purl.obolibrary.org/obo/CL_0000057 denotes fibroblast
T212 23576-23588 http://purl.obolibrary.org/obo/OBI_0000245 denotes organisation
T213 23676-23686 http://purl.obolibrary.org/obo/CL_0000057 denotes fibroblast
T214 23713-23714 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T215 23731-23741 http://purl.obolibrary.org/obo/OBI_0000245 denotes organizing
T216 23815-23825 http://purl.obolibrary.org/obo/OBI_0000245 denotes organizing
T217 23899-23900 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T218 23964-23969 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T219 24004-24012 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membrane
T220 24023-24024 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T221 24138-24147 http://purl.obolibrary.org/obo/CLO_0001658 denotes activated
T222 24163-24175 http://purl.obolibrary.org/obo/CL_0000057 denotes Fibroblastic
T223 24207-24208 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T224 24340-24341 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T225 24386-24396 http://purl.obolibrary.org/obo/OBI_0000245 denotes organizing
T226 24769-24773 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T227 24769-24773 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T228 24971-24976 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T229 25017-25018 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T230 25233-25243 http://purl.obolibrary.org/obo/OBI_0000245 denotes organizing
T231 25621-25622 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T232 25665-25675 http://purl.obolibrary.org/obo/OBI_0000245 denotes organizing
T233 25853-25854 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T234 26047-26048 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T235 26364-26365 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T236 26465-26469 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T237 26465-26469 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T238 26610-26613 http://purl.obolibrary.org/obo/PR_000001004 denotes CD4
T239 26622-26625 http://purl.obolibrary.org/obo/CLO_0053438 denotes CD8
T240 26628-26635 http://purl.obolibrary.org/obo/CL_0000084 denotes T cells
T241 26637-26639 http://purl.obolibrary.org/obo/CLO_0050509 denotes 27
T242 26669-26673 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T243 26669-26673 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T244 26703-26704 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T245 26724-26726 http://purl.obolibrary.org/obo/CLO_0001302 denotes 34
T246 27157-27161 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T247 27157-27161 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T248 28053-28054 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T249 28223-28227 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T250 28223-28227 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T251 28241-28242 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T252 28827-28828 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T253 28867-28872 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T1 803-816 Chemical denotes galactomannan http://purl.obolibrary.org/obo/CHEBI_27680
T2 3594-3604 Chemical denotes antifungal http://purl.obolibrary.org/obo/CHEBI_35718
T3 4685-4696 Chemical denotes chloroquine http://purl.obolibrary.org/obo/CHEBI_3638
T4 4872-4879 Chemical denotes heparin http://purl.obolibrary.org/obo/CHEBI_28304
T5 4902-4904 Chemical denotes IE http://purl.obolibrary.org/obo/CHEBI_137259
T6 5162-5175 Chemical denotes galactomannan http://purl.obolibrary.org/obo/CHEBI_27680
T7 5231-5244 Chemical denotes galactomannan http://purl.obolibrary.org/obo/CHEBI_27680
T8 5246-5248 Chemical denotes GM http://purl.obolibrary.org/obo/CHEBI_74120|http://purl.obolibrary.org/obo/CHEBI_27680
T10 5287-5290 Chemical denotes BAL http://purl.obolibrary.org/obo/CHEBI_64198
T11 5319-5326 Chemical denotes antigen http://purl.obolibrary.org/obo/CHEBI_59132
T12 5600-5602 Chemical denotes GM http://purl.obolibrary.org/obo/CHEBI_74120|http://purl.obolibrary.org/obo/CHEBI_27680
T14 5618-5621 Chemical denotes BAL http://purl.obolibrary.org/obo/CHEBI_64198
T15 5677-5680 Chemical denotes BAL http://purl.obolibrary.org/obo/CHEBI_64198
T16 6187-6200 Chemical denotes periodic acid http://purl.obolibrary.org/obo/CHEBI_29149
T17 6196-6200 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T18 6223-6226 Chemical denotes PAS http://purl.obolibrary.org/obo/CHEBI_27565
T19 6739-6743 Chemical denotes male http://purl.obolibrary.org/obo/CHEBI_30780
T20 6916-6928 Chemical denotes prednisolone http://purl.obolibrary.org/obo/CHEBI_8378
T21 7368-7370 Chemical denotes GM http://purl.obolibrary.org/obo/CHEBI_74120|http://purl.obolibrary.org/obo/CHEBI_27680
T23 7374-7377 Chemical denotes BAL http://purl.obolibrary.org/obo/CHEBI_64198
T24 7416-7426 Chemical denotes antifungal http://purl.obolibrary.org/obo/CHEBI_35718
T25 7440-7452 Chemical denotes voriconazole http://purl.obolibrary.org/obo/CHEBI_10023
T26 7457-7470 Chemical denotes anidulafungin http://purl.obolibrary.org/obo/CHEBI_55346
T27 7518-7533 Chemical denotes corticosteroids http://purl.obolibrary.org/obo/CHEBI_50858
T28 7541-7553 Chemical denotes prednisolone http://purl.obolibrary.org/obo/CHEBI_8378
T29 7595-7609 Chemical denotes corticosteroid http://purl.obolibrary.org/obo/CHEBI_50858
T30 7651-7658 Chemical denotes steroid http://purl.obolibrary.org/obo/CHEBI_35341
T31 7880-7883 Chemical denotes BAL http://purl.obolibrary.org/obo/CHEBI_64198
T32 7891-7898 Chemical denotes steroid http://purl.obolibrary.org/obo/CHEBI_35341
T33 8228-8230 Chemical denotes PE http://purl.obolibrary.org/obo/CHEBI_16038|http://purl.obolibrary.org/obo/CHEBI_17553|http://purl.obolibrary.org/obo/CHEBI_74762
T36 8231-8234 Chemical denotes BAL http://purl.obolibrary.org/obo/CHEBI_64198
T37 8241-8243 Chemical denotes GM http://purl.obolibrary.org/obo/CHEBI_74120|http://purl.obolibrary.org/obo/CHEBI_27680
T39 8292-8303 Chemical denotes Chloroquine http://purl.obolibrary.org/obo/CHEBI_3638
T40 8359-8371 Chemical denotes prednisolone http://purl.obolibrary.org/obo/CHEBI_8378
T41 8416-8418 Chemical denotes GM http://purl.obolibrary.org/obo/CHEBI_74120|http://purl.obolibrary.org/obo/CHEBI_27680
T43 8473-8475 Chemical denotes GM http://purl.obolibrary.org/obo/CHEBI_74120|http://purl.obolibrary.org/obo/CHEBI_27680
T45 8574-8576 Chemical denotes GM http://purl.obolibrary.org/obo/CHEBI_74120|http://purl.obolibrary.org/obo/CHEBI_27680
T47 8656-8658 Chemical denotes GM http://purl.obolibrary.org/obo/CHEBI_74120|http://purl.obolibrary.org/obo/CHEBI_27680
T49 8774-8776 Chemical denotes GM http://purl.obolibrary.org/obo/CHEBI_74120|http://purl.obolibrary.org/obo/CHEBI_27680
T51 8853-8855 Chemical denotes DM http://purl.obolibrary.org/obo/CHEBI_141426
T52 8877-8879 Chemical denotes GM http://purl.obolibrary.org/obo/CHEBI_74120|http://purl.obolibrary.org/obo/CHEBI_27680
T54 8949-8951 Chemical denotes GM http://purl.obolibrary.org/obo/CHEBI_74120|http://purl.obolibrary.org/obo/CHEBI_27680
T56 9059-9062 Chemical denotes BAL http://purl.obolibrary.org/obo/CHEBI_64198
T57 9167-9169 Chemical denotes DM http://purl.obolibrary.org/obo/CHEBI_141426
T58 9190-9192 Chemical denotes GM http://purl.obolibrary.org/obo/CHEBI_74120|http://purl.obolibrary.org/obo/CHEBI_27680
T60 9194-9207 Chemical denotes galactomannan http://purl.obolibrary.org/obo/CHEBI_27680
T61 9227-9229 Chemical denotes PE http://purl.obolibrary.org/obo/CHEBI_16038|http://purl.obolibrary.org/obo/CHEBI_17553|http://purl.obolibrary.org/obo/CHEBI_74762
T64 9480-9482 Chemical denotes PE http://purl.obolibrary.org/obo/CHEBI_16038|http://purl.obolibrary.org/obo/CHEBI_17553|http://purl.obolibrary.org/obo/CHEBI_74762
T67 9763-9765 Chemical denotes PE http://purl.obolibrary.org/obo/CHEBI_16038|http://purl.obolibrary.org/obo/CHEBI_17553|http://purl.obolibrary.org/obo/CHEBI_74762
T70 9995-9997 Chemical denotes PE http://purl.obolibrary.org/obo/CHEBI_16038|http://purl.obolibrary.org/obo/CHEBI_17553|http://purl.obolibrary.org/obo/CHEBI_74762
T73 10290-10292 Chemical denotes PE http://purl.obolibrary.org/obo/CHEBI_16038|http://purl.obolibrary.org/obo/CHEBI_17553|http://purl.obolibrary.org/obo/CHEBI_74762
T76 10982-10984 Chemical denotes PE http://purl.obolibrary.org/obo/CHEBI_16038|http://purl.obolibrary.org/obo/CHEBI_17553|http://purl.obolibrary.org/obo/CHEBI_74762
T79 11313-11315 Chemical denotes PE http://purl.obolibrary.org/obo/CHEBI_16038|http://purl.obolibrary.org/obo/CHEBI_17553|http://purl.obolibrary.org/obo/CHEBI_74762
T82 12624-12628 Chemical denotes male http://purl.obolibrary.org/obo/CHEBI_30780
T83 12708-12710 Chemical denotes ED http://purl.obolibrary.org/obo/CHEBI_73503
T84 14309-14312 Chemical denotes PAS http://purl.obolibrary.org/obo/CHEBI_27565
T85 15660-15672 Chemical denotes prednisolone http://purl.obolibrary.org/obo/CHEBI_8378
T86 15994-15997 Chemical denotes BAL http://purl.obolibrary.org/obo/CHEBI_64198
T87 16023-16025 Chemical denotes GM http://purl.obolibrary.org/obo/CHEBI_74120|http://purl.obolibrary.org/obo/CHEBI_27680
T89 16114-16128 Chemical denotes glucocorticoid http://purl.obolibrary.org/obo/CHEBI_24261
T90 16137-16140 Chemical denotes BAL http://purl.obolibrary.org/obo/CHEBI_64198
T91 16161-16163 Chemical denotes GM http://purl.obolibrary.org/obo/CHEBI_74120|http://purl.obolibrary.org/obo/CHEBI_27680
T93 16242-16254 Chemical denotes prednisolone http://purl.obolibrary.org/obo/CHEBI_8378
T94 16286-16296 Chemical denotes antifungal http://purl.obolibrary.org/obo/CHEBI_35718
T95 16969-16972 Chemical denotes PAS http://purl.obolibrary.org/obo/CHEBI_27565
T96 17459-17462 Chemical denotes BAL http://purl.obolibrary.org/obo/CHEBI_64198
T97 17975-17987 Chemical denotes prednisolone http://purl.obolibrary.org/obo/CHEBI_8378
T98 18017-18029 Chemical denotes prednisolone http://purl.obolibrary.org/obo/CHEBI_8378
T99 18064-18066 Chemical denotes GM http://purl.obolibrary.org/obo/CHEBI_74120|http://purl.obolibrary.org/obo/CHEBI_27680
T101 18094-18097 Chemical denotes BAL http://purl.obolibrary.org/obo/CHEBI_64198
T102 18937-18940 Chemical denotes PAS http://purl.obolibrary.org/obo/CHEBI_27565
T103 19134-19138 Chemical denotes male http://purl.obolibrary.org/obo/CHEBI_30780
T104 19212-19214 Chemical denotes ED http://purl.obolibrary.org/obo/CHEBI_73503
T105 19416-19419 Chemical denotes BAL http://purl.obolibrary.org/obo/CHEBI_64198
T106 19458-19460 Chemical denotes GM http://purl.obolibrary.org/obo/CHEBI_74120|http://purl.obolibrary.org/obo/CHEBI_27680
T108 19913-19921 Chemical denotes sedative http://purl.obolibrary.org/obo/CHEBI_35717
T109 20856-20859 Chemical denotes PAS http://purl.obolibrary.org/obo/CHEBI_27565
T110 22728-22732 Chemical denotes drug http://purl.obolibrary.org/obo/CHEBI_23888
T111 23108-23113 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433
T112 23424-23432 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T113 23961-23963 Chemical denotes II http://purl.obolibrary.org/obo/CHEBI_74067
T114 24057-24068 Chemical denotes angiotensin http://purl.obolibrary.org/obo/CHEBI_48433
T115 24077-24080 Chemical denotes RAS http://purl.obolibrary.org/obo/CHEBI_63620
T116 24125-24128 Chemical denotes RAS http://purl.obolibrary.org/obo/CHEBI_63620
T117 24148-24151 Chemical denotes RAS http://purl.obolibrary.org/obo/CHEBI_63620
T118 24315-24317 Chemical denotes CO http://purl.obolibrary.org/obo/CHEBI_17245
T119 24529-24540 Chemical denotes chloroquine http://purl.obolibrary.org/obo/CHEBI_3638
T120 24653-24664 Chemical denotes chloroquine http://purl.obolibrary.org/obo/CHEBI_3638
T121 24743-24747 Chemical denotes drug http://purl.obolibrary.org/obo/CHEBI_23888
T122 24929-24939 Chemical denotes antifungal http://purl.obolibrary.org/obo/CHEBI_35718
T123 25512-25520 Chemical denotes steroids http://purl.obolibrary.org/obo/CHEBI_35341
T124 25898-25905 Chemical denotes steroid http://purl.obolibrary.org/obo/CHEBI_35341
T125 27005-27008 Chemical denotes BAL http://purl.obolibrary.org/obo/CHEBI_64198
T126 27015-27028 Chemical denotes galactomannan http://purl.obolibrary.org/obo/CHEBI_27680
T127 27413-27423 Chemical denotes antifungal http://purl.obolibrary.org/obo/CHEBI_35718
T128 27598-27608 Chemical denotes antifungal http://purl.obolibrary.org/obo/CHEBI_35718
T129 27856-27866 Chemical denotes antifungal http://purl.obolibrary.org/obo/CHEBI_35718
T130 27913-27920 Chemical denotes steroid http://purl.obolibrary.org/obo/CHEBI_35341
T131 29081-29095 Chemical denotes corticosteroid http://purl.obolibrary.org/obo/CHEBI_50858

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T1 754-772 Phenotype denotes pulmonary embolism http://purl.obolibrary.org/obo/HP_0002204
T2 1116-1125 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T3 1127-1150 Phenotype denotes diffuse alveolar damage http://purl.obolibrary.org/obo/HP_0033006
T4 1210-1219 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T5 1463-1472 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T6 1901-1910 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T7 2109-2128 Phenotype denotes respiratory failure http://purl.obolibrary.org/obo/HP_0002878
T8 2298-2318 Phenotype denotes respiratory distress http://purl.obolibrary.org/obo/HP_0002098
T9 2859-2873 Phenotype denotes thromboembolic http://purl.obolibrary.org/obo/HP_0001907
T10 2954-2969 Phenotype denotes thromboembolism http://purl.obolibrary.org/obo/HP_0001907
T11 3415-3438 Phenotype denotes diffuse alveolar damage http://purl.obolibrary.org/obo/HP_0033006
T12 4277-4296 Phenotype denotes respiratory failure http://purl.obolibrary.org/obo/HP_0002878
T13 7197-7215 Phenotype denotes pulmonary embolism http://purl.obolibrary.org/obo/HP_0002204
T14 7720-7729 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T15 9028-9048 Phenotype denotes respiratory distress http://purl.obolibrary.org/obo/HP_0002098
T16 9171-9188 Phenotype denotes diabetes mellitus http://purl.obolibrary.org/obo/HP_0000819
T17 9213-9225 Phenotype denotes hypertension http://purl.obolibrary.org/obo/HP_0000822
T18 9230-9248 Phenotype denotes pulmonary embolism http://purl.obolibrary.org/obo/HP_0002204
T19 9720-9734 Phenotype denotes bronchiectasis http://purl.obolibrary.org/obo/HP_0002110
T20 9966-9980 Phenotype denotes bronchiectasis http://purl.obolibrary.org/obo/HP_0002110
T21 10247-10261 Phenotype denotes bronchiectasis http://purl.obolibrary.org/obo/HP_0002110
T22 10953-10967 Phenotype denotes bronchiectasis http://purl.obolibrary.org/obo/HP_0002110
T23 11219-11228 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T24 11234-11257 Phenotype denotes diffuse alveolar damage http://purl.obolibrary.org/obo/HP_0033006
T25 11302-11311 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T26 11316-11334 Phenotype denotes pulmonary embolism http://purl.obolibrary.org/obo/HP_0002204
T27 12134-12148 Phenotype denotes bronchiectasis http://purl.obolibrary.org/obo/HP_0002110
T28 12280-12303 Phenotype denotes traction bronchiectasis http://purl.obolibrary.org/obo/HP_0032969
T29 12558-12572 Phenotype denotes bronchiectasis http://purl.obolibrary.org/obo/HP_0002110
T30 12600-12609 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T31 12731-12747 Phenotype denotes general weakness http://purl.obolibrary.org/obo/HP_0003324
T32 12749-12754 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T33 12759-12767 Phenotype denotes dyspnoea http://purl.obolibrary.org/obo/HP_0002094
T34 13073-13092 Phenotype denotes acute renal failure http://purl.obolibrary.org/obo/HP_0001919
T35 13481-13495 Phenotype denotes brain ischemia http://purl.obolibrary.org/obo/HP_0002637
T36 14382-14391 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T37 14501-14510 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T38 14720-14743 Phenotype denotes diffuse alveolar damage http://purl.obolibrary.org/obo/HP_0033006
T39 15230-15239 Phenotype denotes diarrhoea http://purl.obolibrary.org/obo/HP_0002014
T40 15244-15263 Phenotype denotes shortness of breath http://purl.obolibrary.org/obo/HP_0002098
T41 15494-15508 Phenotype denotes bronchiectasis http://purl.obolibrary.org/obo/HP_0002110
T42 15957-15980 Phenotype denotes traction bronchiectasis http://purl.obolibrary.org/obo/HP_0032969
T43 16496-16516 Phenotype denotes cerebral haemorrhage http://purl.obolibrary.org/obo/HP_0001342
T44 17046-17064 Phenotype denotes pulmonary fibrosis http://purl.obolibrary.org/obo/HP_0002206
T45 17081-17104 Phenotype denotes Diffuse alveolar damage http://purl.obolibrary.org/obo/HP_0033006
T46 17198-17207 Phenotype denotes hypoxemia http://purl.obolibrary.org/obo/HP_0012418
T47 19039-19062 Phenotype denotes diffuse alveolar damage http://purl.obolibrary.org/obo/HP_0033006
T48 19110-19119 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T49 19244-19249 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T50 19254-19262 Phenotype denotes dyspnoea http://purl.obolibrary.org/obo/HP_0002094
T51 19832-19846 Phenotype denotes bronchiectasis http://purl.obolibrary.org/obo/HP_0002110
T52 20393-20402 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T53 20561-20570 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T54 20985-20994 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T55 21286-21295 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T56 21693-21702 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T57 23742-23751 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T58 23826-23835 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T59 24397-24406 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T60 24756-24781 Phenotype denotes interstitial lung disease http://purl.obolibrary.org/obo/HP_0006530
T61 25244-25253 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T62 25594-25603 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T63 25676-25685 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T64 25945-25977 Phenotype denotes invasive pulmonary aspergillosis http://purl.obolibrary.org/obo/HP_0020103
T65 26093-26102 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T66 26188-26207 Phenotype denotes respiratory failure http://purl.obolibrary.org/obo/HP_0002878
T67 26550-26564 Phenotype denotes cytokine storm http://purl.obolibrary.org/obo/HP_0033041
T68 27239-27271 Phenotype denotes invasive pulmonary aspergillosis http://purl.obolibrary.org/obo/HP_0020103
T69 27531-27536 Phenotype denotes shock http://purl.obolibrary.org/obo/HP_0031273

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T1 4488-4509 http://purl.obolibrary.org/obo/GO_0001171 denotes reverse transcription
T2 4496-4509 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T3 14920-14935 http://purl.obolibrary.org/obo/GO_0016032 denotes viral infection
T4 16198-16204 http://purl.obolibrary.org/obo/GO_0040007 denotes growth
T5 22707-22723 http://purl.obolibrary.org/obo/GO_0016032 denotes viral infections
T6 23254-23266 http://purl.obolibrary.org/obo/GO_0009405 denotes pathogenesis
T7 23645-23651 http://purl.obolibrary.org/obo/GO_0040007 denotes growth
T8 23687-23693 http://purl.obolibrary.org/obo/GO_0040007 denotes growth
T9 24176-24182 http://purl.obolibrary.org/obo/GO_0040007 denotes Growth
T10 24354-24366 http://purl.obolibrary.org/obo/GO_0009405 denotes pathogenesis
T11 26528-26545 http://purl.obolibrary.org/obo/GO_0019079 denotes viral replication
T12 26528-26545 http://purl.obolibrary.org/obo/GO_0019058 denotes viral replication
T13 28462-28474 http://purl.obolibrary.org/obo/GO_0009405 denotes pathogenesis

LitCovid-PD-GlycoEpitope

Id Subject Object Predicate Lexical cue glyco_epitope_db_id
T1 803-816 GlycoEpitope denotes galactomannan http://www.glycoepitope.jp/epitopes/EP0510
T2 5162-5175 GlycoEpitope denotes galactomannan http://www.glycoepitope.jp/epitopes/EP0510
T3 5231-5244 GlycoEpitope denotes galactomannan http://www.glycoepitope.jp/epitopes/EP0510
T4 5246-5248 GlycoEpitope denotes GM http://www.glycoepitope.jp/epitopes/EP0510
T5 5600-5602 GlycoEpitope denotes GM http://www.glycoepitope.jp/epitopes/EP0510
T6 7368-7370 GlycoEpitope denotes GM http://www.glycoepitope.jp/epitopes/EP0510
T7 8241-8243 GlycoEpitope denotes GM http://www.glycoepitope.jp/epitopes/EP0510
T8 8416-8418 GlycoEpitope denotes GM http://www.glycoepitope.jp/epitopes/EP0510
T9 8473-8475 GlycoEpitope denotes GM http://www.glycoepitope.jp/epitopes/EP0510
T10 8574-8576 GlycoEpitope denotes GM http://www.glycoepitope.jp/epitopes/EP0510
T11 8656-8658 GlycoEpitope denotes GM http://www.glycoepitope.jp/epitopes/EP0510
T12 8774-8776 GlycoEpitope denotes GM http://www.glycoepitope.jp/epitopes/EP0510
T13 8877-8879 GlycoEpitope denotes GM http://www.glycoepitope.jp/epitopes/EP0510
T14 8949-8951 GlycoEpitope denotes GM http://www.glycoepitope.jp/epitopes/EP0510
T15 9190-9192 GlycoEpitope denotes GM http://www.glycoepitope.jp/epitopes/EP0510
T16 9194-9207 GlycoEpitope denotes galactomannan http://www.glycoepitope.jp/epitopes/EP0510
T17 16023-16025 GlycoEpitope denotes GM http://www.glycoepitope.jp/epitopes/EP0510
T18 16161-16163 GlycoEpitope denotes GM http://www.glycoepitope.jp/epitopes/EP0510
T19 18064-18066 GlycoEpitope denotes GM http://www.glycoepitope.jp/epitopes/EP0510
T20 19458-19460 GlycoEpitope denotes GM http://www.glycoepitope.jp/epitopes/EP0510
T21 27015-27028 GlycoEpitope denotes galactomannan http://www.glycoepitope.jp/epitopes/EP0510

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T1 0-73 Sentence denotes Late histopathologic characteristics of critically ill COVID-19 patients:
T2 74-152 Sentence denotes Different phenotypes without evidence of invasive aspergillosis, a case series
T3 154-162 Sentence denotes Abstract
T4 163-170 Sentence denotes Purpose
T5 171-280 Sentence denotes Pathological data of critical ill COVID-19 patients is essential in the search for optimal treatment options.
T6 282-302 Sentence denotes Material and methods
T7 303-398 Sentence denotes We performed postmortem needle core lung biopsies in seven patients with COVID-19 related ARDS.
T8 399-512 Sentence denotes Clinical, radiological and microbiological characteristics are reported together with histopathological findings.
T9 514-542 Sentence denotes Measurement and main results
T10 543-625 Sentence denotes Patients age ranged from 58 to 83 years, five males and two females were included.
T11 626-725 Sentence denotes Time from hospital admission to death ranged from 12 to 36 days, with a mean of 20 ventilated days.
T12 726-921 Sentence denotes ICU stay was complicated by pulmonary embolism in five patients and positive galactomannan on bronchoalveolar lavage fluid in six patients, suggesting COVID-19 associated pulmonary aspergillosis.
T13 922-1030 Sentence denotes Chest CT in all patients showed ground glass opacities, commonly progressing to nondependent consolidations.
T14 1031-1220 Sentence denotes We observed four distinct histopathological patterns: acute fibrinous and organizing pneumonia, diffuse alveolar damage, fibrosis and, in four out of seven patients an organizing pneumonia.
T15 1221-1293 Sentence denotes None of the biopsy specimens showed any signs of invasive aspergillosis.
T16 1295-1306 Sentence denotes Conclusions
T17 1307-1473 Sentence denotes In this case series common late histopathology in critically ill COVID patients is not classic DAD but heterogeneous with predominant pattern of organizing pneumonia.
T18 1474-1645 Sentence denotes Postmortem biopsy investigations in critically COVID-19 patients with probable COVID-19 associated pulmonary aspergillosis obtained no evidence for invasive aspergillosis.
T19 1647-1657 Sentence denotes Highlights
T20 1658-1774 Sentence denotes • Probable COVID-19 associated pulmonary aspergillosis is common in mechanically ventilated COVID-19 ARDS patients.
T21 1775-1851 Sentence denotes • Late fase histopathology in critically ill COVID patients is heterogenic.
T22 1852-1947 Sentence denotes • In prolonged COVID-19 related ARDS organizing pneumonia is a predominant histologic pattern.
T23 1949-1964 Sentence denotes 1 Introduction
T24 1965-2335 Sentence denotes Up to 20% of hospitalized coronavirus disease 2019 (COVID-19) patients are admitted to the intensive care unit (ICU) because of acute hypoxemic respiratory failure. [[1], [2], [3], [4]] These patients usually present with bilateral patchy ground glass opacities on computed tomography (CT) thorax fulfilling the definition for acute respiratory distress syndrome (ARDS).
T25 2336-2770 Sentence denotes Often an atypical high compliance phenotype (L-type) is observed during mechanical ventilation in COVID-19 patients in contrast to mechanical ventilation characteristics typically seen in ARDS with low lung compliance phenotype (H -type). [5,6] During ICU stay the radiologic presentation of bilateral patchy ground glass opacities as present at admission often progress to consolidations with or without fibrotic characteristics [7].
T26 2771-2918 Sentence denotes Two earlier observed features may play a critical role in the severity of this disease: thromboembolic complications and early onset aspergillosis.
T27 2919-3032 Sentence denotes The cumulative incidence of venous thromboembolism reported was 49% in COVID-19 patients admitted to the ICU [8].
T28 3033-3128 Sentence denotes Presumed pulmonary aspergillosis may be present in as much as 19% of ICU COVID-19 patients [9].
T29 3129-3347 Sentence denotes Since the physiology in COVID-19 related ARDS as well as its complications seems to differ from “typical’ ARDS, an insight into the pulmonary tissue pathology of this new infectious disease is of the utmost importance.
T30 3348-3483 Sentence denotes The scarcely available pathological data in COVID-19 patients show diffuse alveolar damage, closely related to ARDS [[10], [11], [12]].
T31 3484-3719 Sentence denotes The clinical relevance of COVID-19-associated pulmonary aspergillosis (CAPA) as well as survival benefit with antifungal treatment and associated mortality are under debate since histopathological evidence of CAPA is not obtained [13].
T32 3720-3841 Sentence denotes We examined postmortem obtained lung tissue in seven patients, with COVID related ARDS who needed mechanical ventilation.
T33 3842-3965 Sentence denotes The histopathologic findings, together with clinical features, radiological and microbiological findings are reported here.
T34 3966-4087 Sentence denotes This report may contribute to new insights in the pathogeneses of COVID-19 as well as suggestions for treatment strategy.
T35 4089-4099 Sentence denotes 2 Methods
T36 4101-4133 Sentence denotes 2.1 Study population and design
T37 4134-4446 Sentence denotes All patients with laboratory confirmed severe acute respiratory syndrome coronavirus 2 (SARS-COV-2) admitted to the ICU due to acute hypoxemic respiratory failure between 22 March 2020 and 30 April 2020 and with available postmortem needle core biopsy of the lung were eligible for inclusion in this case series.
T38 4447-4582 Sentence denotes SARS-CoV-2 was diagnosed using real-time reverse transcription polymerase chain reaction (RT-PCR) on sputum and/or bronchial aspirates.
T39 4583-4921 Sentence denotes Routine ICU management included, among other things, selective digestive tract decontamination (SDD), chloroquine until the Dutch National Institute for Public Health and Environment advised against its use at the end of March 2020, and high dose anticoagulation with low-molecular-weight heparin (LMWH) (nadroparin 87 IE/kg twice daily).
T40 4922-5060 Sentence denotes Bronchoscopy, with or without lavage, and testing for pulmonary aspergillosis were performed at the discretion of the attending physician.
T41 5061-5226 Sentence denotes Pulmonary aspergillosis was diagnosed using clinical, radiological and mycological data and included galactomannan (serum and sputum), tracheal or bronchial culture.
T42 5227-5351 Sentence denotes For galactomannan (GM) testing from bronchoalveolar lavage (BAL) fluid Platelia Aspergillis antigen ELISA (Biorad) was used.
T43 5352-5525 Sentence denotes Recently, a case definition for influenza associated pulmonary aspergillosis (IAPA) was proposed by an expert panel, which could be used to classify patients with CAPA [14].
T44 5526-5681 Sentence denotes Diagnostic criteria include proven infection with clinical symptoms and a GM index of ≥1 on BAL or of ≥0ꞏ5 on serum; or Aspergillus spp. cultured from BAL.
T45 5683-5729 Sentence denotes 2.2 Postmortem needle core biopsy of the lung
T46 5730-5863 Sentence denotes With permission from the patients' families, postmortem core needle biopsies were performed on both lungs within an hour after death.
T47 5864-5968 Sentence denotes Lung biopsies were ultrasound and CT guided and combined with surface anatomic landmarks as a reference.
T48 5969-6062 Sentence denotes A minimum of three histologic 14 gauge true cut needle biopsies were performed in both lungs.
T49 6063-6153 Sentence denotes Biopsy specimens were fixed in formalin, embedded in paraffin, and cut into 3 μm sections.
T50 6154-6282 Sentence denotes Hematoxylin and eosin (H&E), and periodic acid–Schiff with diastase (PAS-D) stains were applied according to routine procedures.
T51 6284-6309 Sentence denotes 2.3 Statistical analysis
T52 6310-6379 Sentence denotes Descriptive statistics were used to describe patient characteristics.
T53 6380-6436 Sentence denotes For statistical analysis IBM SPSS version 25.0 was used.
T54 6437-6528 Sentence denotes The local Medical Ethics Committee (Medical Research Committees United) approved the study.
T55 6530-6540 Sentence denotes 3 Results
T56 6542-6564 Sentence denotes 3.1 Clinical features
T57 6565-6658 Sentence denotes During the study period, seven patients underwent postmortem needle core biopsy of the lungs.
T58 6659-6744 Sentence denotes Patients age ranged from 58 to 83 years (median 74 year) and five patients were male.
T59 6745-6811 Sentence denotes None of the patients had a history of (chronic) pulmonary disease.
T60 6812-6929 Sentence denotes One patient used immunosuppressive medication before hospital admission, in this case a short course of prednisolone.
T61 6930-7010 Sentence denotes Median time from hospital to ICU admission was 0 days (interquartile range 0–4).
T62 7011-7075 Sentence denotes Time from hospital admission to death ranged from 12 to 36 days.
T63 7076-7138 Sentence denotes Patients deceased at median of 21(range 9–36) ventilated days.
T64 7139-7216 Sentence denotes In five out of seven patients ICU stay was complicated by pulmonary embolism.
T65 7217-7384 Sentence denotes Adopting the proposed definition of CAPA by van Arkel et al. [9], six patients were classified as having probable CAPA (Table 1 ), based on a positive GM on BAL fluid.
T66 7385-7483 Sentence denotes In those patients, combination antifungal therapy with voriconazole and anidulafungin was started.
T67 7484-7635 Sentence denotes Three out of six patients were on corticosteroids (60 mg prednisolone daily) at the time of CAPA diagnosis and corticosteroid treatment was terminated.
T68 7636-7778 Sentence denotes Indication for steroid treatment in these patients was a suspicion of an organizing pneumonia on chest CT or signs of progression to fibrosis.
T69 7779-7921 Sentence denotes Nosocomial infections including signs for pulmonary aspergillosis were excluded by bronchoscopy with BAL before steroid treatment was started.
T70 7922-8043 Sentence denotes Radiologic findings of chest CT and histologic results of the lungs biopsies of all seven patients are shown in Table 2 .
T71 8044-8096 Sentence denotes Table 1 Patient characteristics and clinical course.
T72 8097-8381 Sentence denotes Case Sex, age (years) Medical history Total hospital days Total ventilated days Berlin classification of ARDS Compliance phenotype PE BAL fluid GM and culture (days post hospital admission) CAPA Chloroquine Prednisolone use during hospital admission Duration of prednisolone treatment
T73 8382-8437 Sentence denotes 1 M, 77 None 12 10 Severe Low Yes GM negative No Yes No
T74 8438-8539 Sentence denotes 2 F, 73 None 20 16 Severe High Yes GM index 4.4 (day 19) Aspergillus fumigatus Probable No Yes 8 days
T75 8540-8619 Sentence denotes 3 F, 58 None 30 26 Severe Low Yes GM index 3.4 (day 20) Probable Yes Yes 5 days
T76 8620-8735 Sentence denotes 4 M, 68 None 21 21 Moderate Low Yes GM index 5.7 (day 1) Aspergillus fumigatus Enterococcus faecium Probable Yes No
T77 8736-8840 Sentence denotes 5 M, 78 HT, CKI 22 21 Moderate Low No GM index 4.3 (day 20) Enterococcus faecium Probable Yes Yes 2 days
T78 8841-8914 Sentence denotes 6 M, 83 HT, DM 13 9 Moderate Low No GM index 1.7 (day 11) Probable Yes No
T79 8915-9016 Sentence denotes 7 M, 74 None 36 36 Severe Low Yes GM index 4.4 (day 24) Enterococcus faecalis Probable Yes Yes 4 days
T80 9017-9249 Sentence denotes ARDS acute respiratory distress syndrome; BAL broncho-alveolar lavage; CAPA, COVID-19 associated pulmonary aspergillosis; CKI, chronic kidney injury; DM, diabetes mellitus; GM, galactomannan; HT, hypertension; PE pulmonary embolism.
T81 9250-9311 Sentence denotes Table 2 Radiological Chest CT scan and histological findings.
T82 9312-9382 Sentence denotes Case Radiological findings Histological findings description Diagnosis
T83 9383-9673 Sentence denotes 1 GGO, crazy paving, non-dependent consolidation, subpleural sparing, segmental and subsegmental PE Intra-alveolar fibromyxoid/fibroblastic bodies (25%), micro-thrombi, thrombi in lager vessels, hyperplasia with atypia, multinucleated giant cell, intranuclear inclusion bodies, no hyphae OP
T84 9674-9927 Sentence denotes 2 GGO, crazy paving, resolving consolidation, bronchiectasis, segmental and subsegmental PE Extensive fibrosis with destruction of alveolar structures, hyperplasia with atypia, multinucleated giant cell, intranuclear inclusion bodies, no hyphae Fibrosis
T85 9928-10196 Sentence denotes 3 GGO, large dependent consolidation, bronchiectasis, subsegmental PE Inflammatory infiltrate, hyaline membranes, sporadic intra-alveolar fibroblastic plug, micro-thrombi, hyperplasia with atypia, multinucleated giant cell, intranuclear inclusion bodies, no hyphae DAD
T86 10197-10516 Sentence denotes 4 GGO, crazy paving, non-dependent consolidation, bronchiectasis, segmental and subsegmental PE Intra-alveolar fibroblastic tissue, with a diffuse component of fibrinous exudate, widening of alveolar septa, micro-thrombi, hyperplasia with atypia, multinucleated giant cell, intranuclear inclusion bodies, no hyphae AFOP
T87 10517-10702 Sentence denotes 5 GGO, consolidation Intra-alveolar fibromyxoid/fibroblastic bodies (32%), micro-thrombi, hyperplasia with atypia, multinucleated giant cell, intranuclear inclusion bodies, no hyphae OP
T88 10703-10916 Sentence denotes 6 GGO, consolidation Intra-alveolar fibromyxoid/fibroblastic bodies (80%), widening of alveolar septa, micro-thrombi, hyperplasia with atypia, multinucleated giant cell, intranuclear inclusion bodies, no hyphae OP
T89 10917-11182 Sentence denotes 7 GGO, crazy paving, consolidation, bronchiectasis, subsegmental PE Intra-alveolar fibromyxoid/fibroblastic bodies (27%), mild widening of alveolar septa, micro-thrombi, hyperplasia with atypia, multinucleated giant cell, intranuclear inclusion bodies, no hyphae OP
T90 11183-11335 Sentence denotes AFOP acute fibrinous and organizing pneumonia, DAD diffuse alveolar damage, GGO, ground glass opacities; OP organizing pneumonia; PE pulmonary embolism.
T91 11336-11499 Sentence denotes To further investigate histopathologic findings we now present the detailed clinical course of four patients with four different histopathological characteristics.
T92 11500-11676 Sentence denotes Because of complexity and importance of the distinct patterns and their relation with radiologic findings and treatment, we preferred to discuss them separately in more detail.
T93 11677-11746 Sentence denotes Chest CT imaging of the four discussed patients are shown in Fig. 1 .
T94 11747-11781 Sentence denotes Fig. 1 Chest CT scans of case 1–4.
T95 11782-11920 Sentence denotes For each patient image A represents chest CT at hospital admission, image B follow up CT-scan (note: chest CT of case 4 was not repeated).
T96 11921-12068 Sentence denotes 1A: bilateral areas of GGO, patchy subpleural non-dependant consolidations 1B: progression of dens subpleural consolidations with air-bronchograms.
T97 12069-12179 Sentence denotes 2A GGO in both lungs, combined with crazy-paving pattern, subtle bronchiectasis are present in affected areas.
T98 12180-12304 Sentence denotes 2B GGO persisted, without progression to consolidations, more pronounced fibrotic reticulation with traction bronchiectasis.
T99 12305-12374 Sentence denotes 3A diffuse bilateral GGO with large gravity dependant consolidations.
T100 12375-12473 Sentence denotes 3B persistent GGO and consolidation, newly formed cyst-like lesions in middle and ventral regions.
T101 12474-12573 Sentence denotes 4A bilateral areas of GGO, patchy non-dependant peripheral consolidations with mild bronchiectasis.
T102 12575-12609 Sentence denotes 3.2 Case 1 – Organizing pneumonia
T103 12610-12768 Sentence denotes A 77-year old male without significant medical history was evaluated in our emergency department (ED) with complaints of general weakness, fever and dyspnoea.
T104 12769-12983 Sentence denotes Initial chest CT showed extensive bilateral areas of ground-glass opacity with both central and peripheral distribution, patchy subpleural non-dependant consolidations and areas with subpleural sparing (Fig. 1-1A).
T105 12984-13143 Sentence denotes Soon after admission patient was in need of mechanical ventilatory support and developed acute renal failure for which renal replacement therapy was initiated.
T106 13144-13359 Sentence denotes After six days of mechanical ventilation chest CT-angiography showed pulmonary emboli along with new areas of ground-glass opacity and progression of dens subpleural consolidations with air-bronchograms (Fig. 1-1B).
T107 13360-13418 Sentence denotes A nosocomial infection was ruled out by bronchial culture.
T108 13419-13583 Sentence denotes Patient's neurologic status deteriorated and CT head revealed brain ischemia due to infarction of the area supplied by the left and right posterior cerebral artery.
T109 13584-13625 Sentence denotes The patient died 12 days after admission.
T110 13626-13734 Sentence denotes Postmortem pathologic examination revealed that the overall architecture of the lung tissue remained intact.
T111 13735-13867 Sentence denotes However, a prominent amount of fibromyxoid or fibroblastic bodies was present in the alveoli with surrounding histiocytes (Fig. 2A .
T112 13868-13941 Sentence denotes The extent of involved lung tissue was estimated at around 25% (Table 2).
T113 13942-14026 Sentence denotes No remnants of hyaline membranes or prominent alveolar fibrinous exudate were found.
T114 14027-14165 Sentence denotes Microthrombi in small blood vessels of the alveolar septa were seen, as well as an organizing thrombus in a larger sized vessel (Fig. 2E).
T115 14166-14280 Sentence denotes The histologic findings in this case point towards an epithelial, and vascular phenotype of a SARS-CoV2 infection.
T116 14281-14321 Sentence denotes No fungi were present in de PAS-D stain.
T117 14322-14392 Sentence denotes This histologic pattern is characteristic for an organizing pneumonia.
T118 14393-14426 Sentence denotes Fig. 2 Microscopic lung findings.
T119 14427-15049 Sentence denotes A, case 1: intra-alveolar fibroblastic bodies, consistent with organizing pneumonia, (H&E, 10×) B, case 2: loss of alveolar architecture with extensive fibrosis (H&E; 10×) C, case 3: inflammatory infiltrate with neutrophils and lymphocytes, note the hyaline membranes (arrows), suggestive for diffuse alveolar damage. (H&E, 20×) D, case 4: prominent fibrinous exudate in alveoli as seen in AFOP (H&E; 10×) E: thrombus in larger vessel (H&E, 5×) F: cytopathogenic changes in pneumocytes due to viral infection seen in all cases: hyperplasia, multinucleated giant cells (asterisks), intranuclear inclusion bodies (H&E, 40×).
T120 15051-15073 Sentence denotes 3.3 Case 2 – Fibrosis
T121 15074-15171 Sentence denotes A 73-year old female was transferred to our ICU due to shortage of ICU beds in a nearby hospital.
T122 15172-15264 Sentence denotes Prior to ICU admission, she was healthy but complained of diarrhoea and shortness of breath.
T123 15265-15421 Sentence denotes Non-contrast chest CT at initial hospital admission showed multiple bilateral areas of ground-glass opacity along the bronchovascular bundles and periphery.
T124 15422-15486 Sentence denotes There were some small areas of consolidation in the upper lobes.
T125 15487-15552 Sentence denotes Subtle bronchiectasis were present in affected areas (Fig. 1-2A).
T126 15553-15641 Sentence denotes Her respiratory condition required mechanical ventilation in prone position due to ARDS.
T127 15642-15726 Sentence denotes After seven days, prednisolone treatment was started because of lack of improvement.
T128 15727-15807 Sentence denotes Repeat chest CT-angiography showed segmental pulmonary emboli in the right lung.
T129 15808-15882 Sentence denotes Ground-glass opacities persisted while the consolidations had disappeared.
T130 15883-15993 Sentence denotes A reticular pattern combined with GGO was more pronounced with increasing traction bronchiectasis (Fig. 1-2B).
T131 15994-16085 Sentence denotes BAL was performed twice, but GM and culture showed no signs of additional fungal infection.
T132 16086-16174 Sentence denotes After one week of high dose glucocorticoid therapy BAL was repeated with a GM index 4.4.
T133 16175-16230 Sentence denotes Fungal cultures showed growth of Aspergillus fumigatus.
T134 16231-16317 Sentence denotes Therefore, prednisolone treatment was discontinued and antifungal treatment initiated.
T135 16318-16449 Sentence denotes CT head was performed because of the development of an epileptic insult and showed small foci of haemorrhage in both frontal lobes.
T136 16450-16567 Sentence denotes Neurologic condition worsened and progressive cerebral haemorrhage on follow up CT head was seen with poor prognosis.
T137 16568-16658 Sentence denotes Palliative treatment was started and the patient deceased 27 days after onset of symptoms.
T138 16659-16770 Sentence denotes Microscopic examination of lung tissue of this case showed an almost complete loss of normal lung architecture.
T139 16771-16856 Sentence denotes Alveolar structures were unrecognizable and replaced by extensive fibrosis (Fig. 2B).
T140 16857-16961 Sentence denotes What remained were several foci of pneumocytes, bronchial epithelium, and blood vessels without thrombi.
T141 16962-17004 Sentence denotes In the PAS-D stain no fungi were observed.
T142 17005-17065 Sentence denotes The prominent pattern in this patient is pulmonary fibrosis.
T143 17067-17104 Sentence denotes 3.4 Case 3 – Diffuse alveolar damage
T144 17105-17208 Sentence denotes A 58-year old female was admitted to the ICU and needed mechanical ventilation due to severe hypoxemia.
T145 17209-17416 Sentence denotes Chest CT-angiography showed dubious unilateral sub-segmental pulmonary emboli and diffuse bilateral ground-glass opacities with anteroposterior gradient along with large dependant consolidations (Fig. 1-3A).
T146 17417-17587 Sentence denotes On the 8th day of mechanical ventilation, BAL was performed and CT-scan was repeated because of deteriorating pulmonary condition with increasing inflammatory parameters.
T147 17588-17710 Sentence denotes Chest CT-angiography showed bilateral sub-segmental pulmonary emboli, persistent ground-glass opacities and consolidation.
T148 17711-17878 Sentence denotes Newly formed coarse cyst-like lesions in the middle and ventral regions (non-dependant regions) were noted, probably due to ventilator induced lung injury (Fig. 1-3B).
T149 17879-18000 Sentence denotes Considering lack of respiratory improvement and progression of fibrosis on radiological imaging prednisolone was started.
T150 18001-18104 Sentence denotes After five days prednisolone was stopped because of a positive GM index of 3.4 from repeated BAL fluid.
T151 18105-18145 Sentence denotes Fungal culture remained negative though.
T152 18146-18202 Sentence denotes Her respiratory status stabilised but remained critical.
T153 18203-18325 Sentence denotes After pausing the sedation, the patient remained unresponsive and CT head showed ischemia with small areas of haemorrhage.
T154 18326-18461 Sentence denotes In light of her pour neurologic and respiratory prognosis, treatment was ended and patient expired after 26 days on ventilator support.
T155 18462-18561 Sentence denotes In the core needle biopsy specimens the lung tissue largely preserved its preexisting architecture.
T156 18562-18714 Sentence denotes Histologic findings included an inflammatory infiltrate consisting of neutrophils and lymphocytes, and only a sporadic intra-alveolar fibroblastic plug.
T157 18715-18849 Sentence denotes The striking, distinctive feature of this case was the presence of thin, delicate hyaline membranes along the alveolar wall (Fig. 2C).
T158 18850-18898 Sentence denotes Again, micro thrombi were observed in this case.
T159 18899-18949 Sentence denotes No fungi could be demonstrated in the PAS-D stain.
T160 18950-19063 Sentence denotes Together with the clinical characteristics, these histologic findings were suggestive of diffuse alveolar damage.
T161 19065-19119 Sentence denotes 3.5 Case 4 – Acute fibrinous and organizing pneumonia
T162 19120-19263 Sentence denotes A 68-year old male without medical history of cardiopulmonary disease, was presented at the ED in a critical condition with fever and dyspnoea.
T163 19264-19383 Sentence denotes Patient was in need of endotracheal intubation and mechanical ventilation in prone position to improve his oxygenation.
T164 19384-19521 Sentence denotes To exclude secondary infection, BAL was performed and revealed a positive GM and cultured Aspergillus fumigatus and Enterococcus faecium.
T165 19522-19576 Sentence denotes Antifungal therapy was added to his treatment regimen.
T166 19577-19771 Sentence denotes Chest CT-angiography showed segmental pulmonary emboli along with extensive bilateral areas of ground-glass opacity with reticulation and multiple patchy non-dependant peripheral consolidations.
T167 19772-19859 Sentence denotes In contrast to normal areas, the abnormal areas showed mild bronchiectasis (Fig. 1-4A).
T168 19860-19933 Sentence denotes The patient remained unresponsive after cessation of sedative medication.
T169 19934-20024 Sentence denotes CT head showed extensive bilateral cerebellar ischemia with small haemorrhagic components.
T170 20025-20147 Sentence denotes After three weeks of mechanical ventilation his respiratory status worsened and treatment was ended due to poor prognosis.
T171 20148-20205 Sentence denotes The patient passed away 21 days after hospital admission.
T172 20206-20303 Sentence denotes Biopsy specimens showed a pattern of lung injury, that was partially identical to that of case 1.
T173 20304-20403 Sentence denotes Intra-alveolar depositions of fibroblastic tissue were found, consistent with organizing pneumonia.
T174 20404-20571 Sentence denotes However, a predominant, diffuse component of fibrinous exudate in the alveoli was present, which was not the case in the aforementioned case with organizing pneumonia.
T175 20572-20706 Sentence denotes Other histologic findings were a chronic inflammatory infiltrate, and mild interstitial changes, including widening of alveolar septa.
T176 20707-20769 Sentence denotes Microthrombi in small septal blood vessels were also observed.
T177 20770-20844 Sentence denotes Neither remnants hyaline membranes nor prominent eosinophils were present.
T178 20845-20891 Sentence denotes Additional PAS-D stain did not show any fungi.
T179 20892-21011 Sentence denotes The overall histologic pattern of this case was classified as acute fibrinous and organizing pneumonia (AFOP), Fig. 2D.
T180 21013-21026 Sentence denotes 4 Discussion
T181 21027-21141 Sentence denotes We report pathology in deceased critically ill ICU COVID patient in the late phase of disease to be heterogeneous.
T182 21142-21301 Sentence denotes Histopathologically, we observed four distinct histopathological patterns: AFOP, DAD, fibrosis and, in four out of seven patients an organizing pneumonia (OP).
T183 21302-21509 Sentence denotes Interestingly, our findings are in contrast to previously reported postmortem studies in COVID-19 patients in which DAD is the most common predominant pattern [[10], [11], [12],[15], [16], [17], [18], [19]].
T184 21510-21628 Sentence denotes In two recent autopsy studies of 21 and 12 deceased COVID-19 patients, prevalence of DAD was 76% and 67% respectively.
T185 21629-21711 Sentence denotes None of the patients had the postmortem diagnosis of organizing pneumonia [10,11].
T186 21712-21820 Sentence denotes In the study of Ackermann and colleagues, pulmonary histology of all seven studied patients showed DAD [19].
T187 21821-22035 Sentence denotes Although the organizing stage of DAD may overlap with the histopathological features of OP in lung biopsy, the histologic hallmark of DAD, namely remnants of hyaline membranes were not present in our four OP cases.
T188 22036-22306 Sentence denotes Most plausible explanation for the more common pattern of OP in our study population when compared to previous mentioned studies is the difference in length of hospital and ICU stay correlating with more advanced disease and longer treatment with mechanical ventilation.
T189 22307-22454 Sentence denotes In the studies mentioned above the mean hospital stay was six days or less and most of the patients did not receive mechanical ventilatory support.
T190 22455-22611 Sentence denotes In our present series mean hospital stay of 22 days is significant longer and all patients died in the ICU with a mean of 20 days on mechanical ventilation.
T191 22612-22743 Sentence denotes Secondary OP can be seen in association with many types of non-specific lung injury, including viral infections and drug reactions.
T192 22744-22870 Sentence denotes OP is reported following severe influenza infections [[20], [21], [22], [23], [24]] and Middle East Respiratory Syndrome [25].
T193 22871-23064 Sentence denotes Most recently, Copin et al. reported postmortem biopsies on six patients with COVID and reported in five patients with phenotype H and AFOP histology in contrast to their patient with DAD [26].
T194 23065-23160 Sentence denotes Estimated elapsed disease time in the AFOP group was 20 days versus 6 days in the DAD patients.
T195 23161-23234 Sentence denotes In our opinion this supports the theory that pathology changes over time.
T196 23235-23359 Sentence denotes Although the exact pathogenesis of OP remains unknown, it is thought that OP is a consequence of alveolar epithelial injury.
T197 23360-23504 Sentence denotes This initial epithelial injury is followed by leakage of plasma proteins, leading to a cascade of host responses with hyperinflammation [27,28].
T198 23505-23623 Sentence denotes Subsequent fibroblast recruitment and connective tissue and fibroblast organisation is seen within the alveolar space.
T199 23624-23841 Sentence denotes Vascular endothelial growth factor (VEGF) and basic fibroblast growth factor (bFGF) play a central role in organizing pneumonia and are highly expressed in intraluminal fibromyxoid lesion in organizing pneumonia [29].
T200 23842-24013 Sentence denotes Interestingly, binding to ACE2 receptor is recognized as a critical initial step for SARS-CoV-2 to entry alveolar type II cells, resulting in loss of ACE2 at the membrane.
T201 24014-24134 Sentence denotes ACE 2 is a negative regulator of the renin-angiotensin system (RAS) and this depletion of ACE2 upregulates the RAS [30].
T202 24135-24190 Sentence denotes An activated RAS can induce Fibroblastic Growth Factor.
T203 24191-24252 Sentence denotes ACE2 also plays a role in regulating the effect of VEGF [31].
T204 24253-24407 Sentence denotes Therefore, depletion of ACE2 due to the high affinity of SARS-CO-V2 to ACE2 might play a role in the pathogenesis of COVID19 related organizing pneumonia.
T205 24408-24643 Sentence denotes Being aware that medication can be the cause of OP it is notable is that in our study six out of seven patients received chloroquine, at that time the advised treatment by the Dutch National Institute for Public Health and Environment.
T206 24644-24871 Sentence denotes Although chloroquine use is associated with cardiovascular disorders, pulmonary side effects, i.e. drug induced interstitial lung disease, are not described before, and therefore an unlikely cause of the observed histologic OP.
T207 24872-24955 Sentence denotes We found no studies reporting possible relations between antifungal therapy and OP.
T208 24956-25126 Sentence denotes In retrospect, chest CT scans of each of the patients showed a different development during hospital admission, concordant with the histopathological diagnosis (Table 2).
T209 25127-25254 Sentence denotes Development of peripheral nondependent consolidations warrant further investigation in the presence of an organizing pneumonia.
T210 25255-25314 Sentence denotes Excluding nosocomial infections in such cases is essential.
T211 25315-25502 Sentence denotes The diversity in histopathological findings correlating with radiological findings is interesting considering possible therapeutic implications and should be subject for further research.
T212 25503-25704 Sentence denotes Although steroids are not routinely recommended to be used in de early phase of SARS-CoV-2 pneumonia, they might have a role in the late phase of COVID19 when an organizing pneumonia is suspected [32].
T213 25705-25914 Sentence denotes Recently there is increasing awareness and concern for development of secondary infection in COVID patients e.g. invasive aspergillus co-infection, a contra-indication for (long-term) systemic steroid therapy.
T214 25915-26028 Sentence denotes Criteria and risk factors for invasive pulmonary aspergillosis are well defined in immunocompromised populations.
T215 26029-26239 Sentence denotes Furthermore it is a well known complication of severe influenza pneumonia with reported incidences of 19% in ICU patients admitted for influenza related acute respiratory failure with high mortality rates [33].
T216 26240-26428 Sentence denotes In COVID-19 associated pulmonary aspergillosis (CAPA) case definition is absent, although recently an expert panel proposed a classification for IAPA, which was used to classify CAPA [14].
T217 26429-26641 Sentence denotes Pathophysiology of CAPA consists of lung damage with bilateral alveolar-interstitial damage due to viral replication and cytokine storm in combination with marked low T-lymphocytes CD4 + T and CD8 + T cells [27].
T218 26642-26728 Sentence denotes Secondary infection due to lung tissue damage develop within a median of 17 days [34].
T219 26729-26841 Sentence denotes CAPA data are scarce but increasingly reported, although histological confirmation is still absent [9,13,35,36].
T220 26842-26983 Sentence denotes Of the first 31 COVID-19 patients admitted to our ICU, six where highly suspected for COVID-19 associated pulmonary aspergillosis (CAPA) [9].
T221 26984-27127 Sentence denotes In this case series, BAL fluid galactomannan was positive in six out of the seven cases, concluding in the clinical diagnosis of probable CAPA.
T222 27128-27217 Sentence denotes To our surprise, none of the lung biopsies showed any presence of invasive aspergillosis.
T223 27218-27432 Sentence denotes Lack of evidence for invasive pulmonary aspergillosis in our patients with probable CAPA raises the question whether patients with suspected CAPA truly develop invasive aspergillosis and require antifungal therapy.
T224 27433-27563 Sentence denotes For instance, the three deaths in the CAPA report from France were attributed to bacterial septic shock, and not to aspergillosis.
T225 27564-27771 Sentence denotes Although in our patients adequate antifungal treatment could be an explanation for the absence of histologic fungal features, we find this improbable as respiratory conditions deteriorated despite treatment.
T226 27772-27941 Sentence denotes Further research on the presence of CAPA, its case definition and the necessity for antifungal treatment and (relative) contraindication for steroid treatment is needed.
T227 27942-28116 Sentence denotes We acknowledge the limitations of this report and realize that due to limited sample size of pulmonary tissue, a sampling error in our histologic findings cannot be excluded.
T228 28117-28334 Sentence denotes Although conventional autopsy might be the preferred postmortem examination, postmortem ultrasound guided lung biopsies are a safe and valuable alternative, with an 83% concordance rate with conventional autopsy [37].
T229 28335-28577 Sentence denotes Especially in times of new emerging diseases, like COVID-19, histopathological investigation is essential in understanding the pathogenesis of SARS-CoV-2 infection and thereby providing information leading to possible new therapeutic options.
T230 28579-28592 Sentence denotes 5 Conclusion
T231 28593-28737 Sentence denotes We report late pulmonary pathological findings of COVID-19 ARDS to be heterogeneous and non-typical when compared to non-COVID-19 ARDS patients.
T232 28738-28826 Sentence denotes The predominant histologic pattern in our case series mainly consists of OP and not DAD.
T233 28827-28889 Sentence denotes A concordance with specific findings on chest CT is suggested.
T234 28890-28988 Sentence denotes The absence of histology proven aspergillosis provides further discussion on the presence of CAPA.
T235 28989-29173 Sentence denotes Based on these late postmortem histopathologic findings, we suggest that the empiric use of corticosteroid therapy in COVID-19 related ARDS should be reconsidered in selected patients.
T236 29174-29390 Sentence denotes Further research on the late phase of COVID19 in relation to the presence of different histologic patterns, it's concordance with radiology and the presence of COVID19 associated pulmonary aspergillosis is warranted.
T237 29392-29414 Sentence denotes Author's contributions
T238 29415-29488 Sentence denotes A.W·F, M.K.M.K, M.J.J.H.G., D.C.Y.Y. and A.W.F.M. drafted the manuscript.
T239 29489-29591 Sentence denotes N.J.M.M. and T.C.D.R critically revised the manuscript and approved the final version for publication.
T240 29592-29707 Sentence denotes All the authors reviewed the final draft of the manuscript and agreed on submitting it to Journal of Critical Care.
T241 29709-29716 Sentence denotes Support
T242 29717-29745 Sentence denotes No external funding support.
T243 29747-29754 Sentence denotes Funding
T244 29755-29879 Sentence denotes This research did not receive any specific grant from funding agencies in the public, commercial, or not-for-profit sectors.
T245 29881-29914 Sentence denotes Declaration of Competing Interest
T246 29915-29959 Sentence denotes The authors declare no conflict of interest.

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T44 3392-3400 SP_7 denotes COVID-19
T1 55-63 SP_7 denotes COVID-19
T2 205-213 SP_7 denotes COVID-19
T3 316-326 GO:0016265 denotes postmortem
T4 339-343 UBERON:0002048 denotes lung
T5 376-384 SP_7 denotes COVID-19
T6 658-663 GO:0016265 denotes death
T7 754-763 UBERON:0002048 denotes pulmonary
T8 803-816 CHEBI:27680;CHEBI:27680 denotes galactomannan
T9 820-835 UBERON:0002186;BV_4 denotes bronchoalveolar
T10 836-842 BV_4 denotes lavage
T11 843-848 BV_4;UBERON:0006314 denotes fluid
T12 877-885 SP_7 denotes COVID-19
T13 897-906 UBERON:0002048 denotes pulmonary
T14 1135-1143 UBERON:0003215 denotes alveolar
T15 1474-1484 GO:0016265 denotes Postmortem
T16 1521-1529 SP_7 denotes COVID-19
T17 1553-1561 SP_7 denotes COVID-19
T18 1573-1582 UBERON:0002048 denotes pulmonary
T19 1670-1678 SP_7 denotes COVID-19
T20 1690-1699 UBERON:0002048 denotes pulmonary
T21 1751-1759 SP_7 denotes COVID-19
T22 1868-1876 SP_7 denotes COVID-19
T27 1991-2002 NCBITaxon:11118 denotes coronavirus
T28 2017-2025 SP_7 denotes COVID-19
T29 2066-2070 UBERON:0007221 denotes care
T30 2109-2120 UBERON:0001004 denotes respiratory
T31 2255-2261 UBERON:0000915 denotes thorax
T32 2298-2309 UBERON:0001004 denotes respiratory
T33 2434-2442 SP_7 denotes COVID-19
T34 2538-2542 UBERON:0002048 denotes lung
T35 2859-2873 GO:0007596 denotes thromboembolic
T36 2947-2953 UBERON:0001638 denotes venous
T37 2954-2969 GO:0007596 denotes thromboembolism
T38 2990-2998 SP_7 denotes COVID-19
T39 3042-3051 UBERON:0002048 denotes pulmonary
T40 3106-3114 SP_7 denotes COVID-19
T41 3153-3161 SP_7 denotes COVID-19
T42 3261-3270 UBERON:0002048 denotes pulmonary
T43 3271-3277 UBERON:0000479 denotes tissue
T45 3423-3431 UBERON:0003215 denotes alveolar
T46 3510-3518 SP_7 denotes COVID-19
T47 3530-3539 UBERON:0002048 denotes pulmonary
T48 3732-3742 GO:0016265 denotes postmortem
T49 3752-3756 UBERON:0002048 denotes lung
T50 3757-3763 UBERON:0000479 denotes tissue
T51 4032-4040 SP_7 denotes COVID-19
T52 4173-4185 SP_7 denotes severe acute
T53 4186-4197 SP_7;UBERON:0001004 denotes respiratory
T54 4198-4220 SP_7 denotes syndrome coronavirus 2
T55 4222-4232 SP_7 denotes SARS-COV-2
T56 4277-4288 UBERON:0001004 denotes respiratory
T57 4356-4366 GO:0016265 denotes postmortem
T58 4393-4397 UBERON:0002048 denotes lung
T59 4447-4457 SP_7 denotes SARS-CoV-2
T60 4488-4509 GO:0001171 denotes reverse transcription
T61 4548-4554 UBERON:0007311 denotes sputum
T62 4562-4571 UBERON:0004242 denotes bronchial
T63 4646-4655 GO:0007586;UBERON:0001555 denotes digestive
T64 4656-4661 UBERON:0001555 denotes tract
T65 4685-4696 CHEBI:3638;DG_10;CHEBI:3638 denotes chloroquine
T66 4830-4845 GO:0050817 denotes anticoagulation
T67 4872-4879 CHEBI:24505;CHEBI:24505 denotes heparin
T68 4976-4985 UBERON:0002048 denotes pulmonary
T69 5061-5070 UBERON:0002048 denotes Pulmonary
T70 5162-5175 CHEBI:27680;CHEBI:27680 denotes galactomannan
T71 5177-5182 UBERON:0001977 denotes serum
T72 5187-5193 UBERON:0007311 denotes sputum
T73 5196-5204 UBERON:0003126 denotes tracheal
T74 5208-5217 UBERON:0004242 denotes bronchial
T75 5231-5244 CHEBI:27680;CHEBI:27680 denotes galactomannan
T76 5263-5278 UBERON:0002031 denotes bronchoalveolar
T77 5279-5285 UBERON:0004821 denotes lavage
T78 5319-5326 CHEBI:59132;CHEBI:59132 denotes antigen
T79 5405-5414 UBERON:0002048 denotes pulmonary
T80 5636-5641 UBERON:0001977 denotes serum
T81 5646-5657 NCBITaxon:5052 denotes Aspergillus
T82 5688-5698 GO:0016265 denotes Postmortem
T83 5725-5729 UBERON:0002048 denotes lung
T84 5775-5785 GO:0016265 denotes postmortem
T85 5830-5835 UBERON:0000170 denotes lungs
T86 5857-5862 GO:0016265 denotes death
T87 5864-5868 UBERON:0002048 denotes Lung
T88 5934-5942 UBERON:0001062 denotes anatomic
T89 6056-6061 UBERON:0000170 denotes lungs
T90 6094-6102 CHEBI:16842;CHEBI:16842 denotes formalin
T91 6154-6165 CHEBI:51686;CHEBI:51686 denotes Hematoxylin
T92 6177-6178 CHEBI:51686;CHEBI:51686 denotes H
T93 6187-6200 CHEBI:29149;CHEBI:29149 denotes periodic acid
T94 6615-6625 GO:0016265 denotes postmortem
T95 6652-6657 UBERON:0000170 denotes lungs
T96 6793-6802 UBERON:0002048 denotes pulmonary
T97 6829-6846 CHEBI:35705;CHEBI:35705 denotes immunosuppressive
T98 6916-6928 CHEBI:8378;CHEBI:8378 denotes prednisolone
T99 7043-7048 GO:0016265 denotes death
T100 7197-7206 UBERON:0002048 denotes pulmonary
T101 7440-7452 CHEBI:10023;CHEBI:10023 denotes voriconazole
T102 7518-7533 CHEBI:50858;CHEBI:50858 denotes corticosteroids
T103 7541-7553 CHEBI:8378;CHEBI:8378 denotes prednisolone
T104 7595-7609 CHEBI:50858;CHEBI:50858 denotes corticosteroid
T105 7651-7658 CHEBI:35341;CHEBI:35341 denotes steroid
T106 7733-7738 UBERON:0001443 denotes chest
T107 7821-7830 UBERON:0002048 denotes pulmonary
T108 7891-7898 CHEBI:35341;CHEBI:35341 denotes steroid
T109 7945-7950 UBERON:0001443 denotes chest
T110 7984-7989 UBERON:0000170 denotes lungs
T184 9028-9039 UBERON:0001004 denotes respiratory
T185 9059-9070 UBERON:0002299 denotes BAL broncho
T186 9071-9086 UBERON:0002299 denotes alveolar lavage
T187 9094-9102 SP_7 denotes COVID-19
T188 9114-9123 UBERON:0002048 denotes pulmonary
T189 9152-9158 UBERON:0002113 denotes kidney
T190 9230-9239 UBERON:0002048 denotes pulmonary
T191 9317-9318 UBERON:0003215 denotes R
T192 9322-9324 UBERON:0002048 denotes lo
T194 9379-9380 UBERON:0001443 denotes s
T204 9471-9472 UBERON:0002106 denotes e
T206 9484-9485 UBERON:0002113 denotes n
T208 9490-9491 UBERON:0002048 denotes l
T218 9510-9522 CL:0000057 denotes fibroblastic
T227 9552-9559 UBERON:0010210 denotes thrombi
T228 9569-9575 UBERON:0000055 denotes vessel
T230 9582-9583 SP_7 denotes r
T238 9598-9600 CL:0000775 denotes pi
T240 9605-9606 UBERON:0003215 denotes l
T248 9611-9612 NCBITaxon:10239 denotes l
T249 9614-9617 GO:0005634;CL:0000647 denotes ted
T250 9618-9628 CL:0000647 denotes giant cell
T251 9630-9642 GO:0005634 denotes intranuclear
T252 9643-9659 GO:0016234 denotes inclusion bodies
T254 9661-9662 UBERON:0002048 denotes n
T255 9662-9663 UBERON:0003215 denotes o
T257 9667-9668 CHEBI:51686;CHEBI:51686 denotes h
T260 9672-9675 CL:0000775 denotes P 2
T264 9689-9691 UBERON:0003215 denotes vi
T270 9700-9702 NCBITaxon:10239 denotes vi
T272 9703-9706 CL:0000647 denotes g c
T274 9706-9709 GO:0016234 denotes ons
T276 9725-9728 UBERON:0001443 denotes hie
T277 9752-9754 UBERON:3010752 denotes bs
T279 9772-9775 CHEBI:8378;CHEBI:8378 denotes ive
T282 9779-9780 UBERON:0002167 denotes r
T284 9815-9816 CHEBI:24261;CHEBI:24261 denotes t
T286 9835-9836 CHEBI:8378;CHEBI:8378 denotes i
T287 9841-9842 UBERON:0000033 denotes h
T289 9852-9854 UBERON:0001016 denotes ul
T290 9858-9860 UBERON:0001893 denotes cl
T291 9863-9865 UBERON:0000033 denotes ed
T292 9874-9877 UBERON:0002048 denotes ll,
T293 9878-9879 UBERON:0000479 denotes i
T294 9883-9884 UBERON:0002048 denotes n
T298 9901-9904 UBERON:0001981 denotes bod
T307 9995-9997 CHEBI:8378;CHEBI:8378 denotes PE
T308 9999-10002 CHEBI:8378;CHEBI:8378 denotes nfl
T310 10009-10010 UBERON:0001004 denotes y
T313 10024-10025 UBERON:0001004 denotes y
T318 10038-10040 CL:0000542 denotes es
T319 10057-10065 UBERON:0003215 denotes alveolar
T320 10066-10078 CL:0000057 denotes fibroblastic
T321 10079-10083 UBERON:0010148 denotes plug
T322 10512-10577 UBERON:0004894 denotes AFOP 5 GGO, consolidation Intra-alveolar fibromyxoid/fibroblastic
T323 10598-10605 UBERON:0010210 denotes thrombi
T324 10682-10709 NCBITaxon:4751 denotes bodies, no hyphae OP 6 GGO,
T325 11056-11064 UBERON:0003215 denotes alveolar
T326 11516-11543 UBERON:0001852 denotes exity and importance of the
T327 11665-11675 GO:0015671 denotes ore detail
T328 11903-11957 NCBITaxon:746128 denotes as not repeated). 1A: bilateral areas of GGO, patchy s
T329 12005-12066 NCBITaxon:1352 denotes ession of dens subpleural consolidations with air-bronchogram
T330 12221-12241 UBERON:0002048 denotes consolidations, more
T331 12778-12782 UBERON:0000033 denotes hest
T332 12813-12868 UBERON:0002037 denotes areas of ground-glass opacity with both central and per
T333 13200-13274 UBERON:0001004 denotes raphy showed pulmonary emboli along with new areas of ground-glass opacity
T334 13886-13895 UBERON:0002048 denotes lved lung
T335 14228-14244 UBERON:0003215 denotes al, and vascular
T336 14284-14321 CL:0000057 denotes fungi were present in de PAS-D stain.
T337 14322-14337 UBERON:0000479 denotes This histologic
T338 14798-14805 UBERON:0003215 denotes alveoli
T339 16289-16405 UBERON:0005169 denotes ifungal treatment initiated. CT head was performed because of the development of an epileptic insult and showed smal
T340 16535-16581 UBERON:0003215 denotes ad was seen with poor prognosis. Palliative tr
T341 16591-16622 UBERON:0003037 denotes s started and the patient decea
T342 16780-16883 UBERON:0003037 denotes structures were unrecognizable and replaced by extensive fibrosis (Fig. 2B). What remained were several
T343 16905-16944 UBERON:0001981 denotes bronchial epithelium, and blood vessels
T344 17263-17331 GO:0016020 denotes mental pulmonary emboli and diffuse bilateral ground-glass opacities
T345 17581-17782 CL:0000771 denotes eters. Chest CT-angiography showed bilateral sub-segmental pulmonary emboli, persistent ground-glass opacities and consolidation. Newly formed coarse cyst-like lesions in the middle and ventral regions
T346 18336-18356 NCBITaxon:4751 denotes f her pour neurologi
T347 21369-21379 GO:0016265 denotes postmortem
T348 21391-21399 SP_7 denotes COVID-19
T349 21562-21570 SP_7 denotes COVID-19
T350 21658-21668 GO:0016265 denotes postmortem
T351 21754-21763 UBERON:0002048 denotes pulmonary
T352 21915-21919 UBERON:0002048 denotes lung
T353 21987-21996 GO:0016020 denotes membranes
T354 22546-22550 GO:0016265 denotes died
T355 22684-22688 UBERON:0002048 denotes lung
T356 22707-22712 NCBITaxon:10239 denotes viral
T357 22728-22732 CHEBI:23888;CHEBI:23888 denotes drug
T358 22908-22918 GO:0016265 denotes postmortem
T359 23332-23340 UBERON:0003215 denotes alveolar
T360 23341-23351 UBERON:0000483 denotes epithelial
T361 23373-23383 UBERON:0000483 denotes epithelial
T362 23417-23423 UBERON:0001969 denotes plasma
T363 23516-23526 CL:0000057 denotes fibroblast
T364 23543-23560 UBERON:0002384 denotes connective tissue
T365 23565-23575 CL:0000057 denotes fibroblast
T366 23608-23616 UBERON:0003215 denotes alveolar
T367 23633-23644 UBERON:0001986 denotes endothelial
T368 23660-23664 PR:000017284 denotes VEGF
T369 23670-23675 PR:000007489 denotes basic
T370 23676-23686 PR:000007489;CL:0000057 denotes fibroblast
T371 23687-23700 PR:000007489 denotes growth factor
T372 23702-23706 PR:000007489 denotes bFGF
T373 23767-23776 GO:0010467 denotes expressed
T374 23868-23872 G_3;PG_10;PR:000003622 denotes ACE2
T375 23927-23937 SP_7 denotes SARS-CoV-2
T376 23947-23955 UBERON:0003215;CL:0002063 denotes alveolar
T377 23956-23969 CL:0002063 denotes type II cells
T378 23992-23996 G_3;PG_10;PR:000003622 denotes ACE2
T379 24004-24012 GO:0016020 denotes membrane
T380 24014-24019 G_3;PG_10;PR:000003622 denotes ACE 2
T381 24051-24056 PR:000013883 denotes renin
T382 24104-24108 G_3;PG_10;PR:000003622 denotes ACE2
T383 24163-24175 CL:0000057 denotes Fibroblastic
T384 24191-24195 G_3;PG_10;PR:000003622 denotes ACE2
T385 24217-24227 GO:0065007 denotes regulating
T386 24277-24281 G_3;PG_10;PR:000003622 denotes ACE2
T387 24310-24314 PR:000014459;SP_10 denotes SARS
T388 24324-24328 G_3;PG_10;PR:000003622 denotes ACE2
T389 24370-24377 SP_7 denotes COVID19
T390 24529-24540 CHEBI:3638;DG_10;CHEBI:3638 denotes chloroquine
T391 24653-24664 CHEBI:3638;DG_10;CHEBI:3638 denotes chloroquine
T392 24688-24702 UBERON:0004535 denotes cardiovascular
T393 24714-24723 UBERON:0002048 denotes pulmonary
T394 24743-24747 CHEBI:23888;CHEBI:23888 denotes drug
T395 24756-24768 UBERON:0005169 denotes interstitial
T396 24769-24773 UBERON:0002048 denotes lung
T397 24971-24976 UBERON:0001443 denotes chest
T398 25512-25520 CHEBI:35341;CHEBI:35341 denotes steroids
T399 25583-25593 SP_7 denotes SARS-CoV-2
T400 25649-25656 SP_7 denotes COVID19
T401 25898-25905 CHEBI:35341;CHEBI:35341 denotes steroid
T402 25954-25963 UBERON:0002048 denotes pulmonary
T403 26188-26199 UBERON:0001004 denotes respiratory
T404 26243-26251 SP_7 denotes COVID-19
T405 26263-26272 UBERON:0002048 denotes pulmonary
T406 26465-26469 UBERON:0002048 denotes lung
T407 26492-26500 UBERON:0003215 denotes alveolar
T408 26501-26513 UBERON:0005169 denotes interstitial
T409 26528-26533 NCBITaxon:10239;GO:0006260 denotes viral
T410 26534-26545 GO:0006260 denotes replication
T411 26596-26609 CL:0000084 denotes T-lymphocytes
T412 26610-26613 PR:000001004 denotes CD4
T413 26616-26617 CL:0000084 denotes T
T414 26628-26635 CL:0000084 denotes T cells
T415 26669-26673 UBERON:0002048 denotes lung
T416 26674-26680 UBERON:0000479 denotes tissue
T417 26858-26866 SP_7 denotes COVID-19
T418 26928-26936 SP_7 denotes COVID-19
T419 26948-26957 UBERON:0002048 denotes pulmonary
T420 27009-27014 UBERON:0006314 denotes fluid
T421 27015-27028 CHEBI:27680;CHEBI:27680 denotes galactomannan
T422 27157-27161 UBERON:0002048 denotes lung
T423 27248-27257 UBERON:0002048 denotes pulmonary
T424 27457-27463 GO:0016265 denotes deaths
T425 27514-27523 NCBITaxon:2 denotes bacterial
T426 27717-27728 UBERON:0001004 denotes respiratory
T427 27913-27920 CHEBI:35341;CHEBI:35341 denotes steroid
T428 28035-28044 UBERON:0002048 denotes pulmonary
T429 28045-28051 UBERON:0000479 denotes tissue
T430 28170-28180 GO:0016265 denotes postmortem
T431 28194-28204 GO:0016265 denotes postmortem
T432 28223-28227 UBERON:0002048 denotes lung
T433 28386-28394 SP_7 denotes COVID-19
T434 28478-28488 SP_7 denotes SARS-CoV-2
T435 28608-28617 UBERON:0002048 denotes pulmonary
T436 28643-28651 SP_7 denotes COVID-19
T437 28714-28722 SP_7 denotes COVID-19
T438 28867-28872 UBERON:0001443 denotes chest
T439 29009-29019 GO:0016265 denotes postmortem
T440 29081-29095 CHEBI:50858;CHEBI:50858 denotes corticosteroid
T441 29107-29115 SP_7 denotes COVID-19
T442 29212-29219 SP_7 denotes COVID19
T443 29334-29341 SP_7 denotes COVID19
T444 29353-29362 UBERON:0002048 denotes pulmonary
T15464 55-63 SP_7 denotes COVID-19
T62119 3788-3793 SP_7 denotes COVID
T53347 29353-29362 UBERON:0002048 denotes pulmonary
T26 5-13 SP_7 denotes histopat
T4694 125-136 NCBITaxon:11118 denotes spergillosi
T32280 151-160 SP_7 denotes s Abstra
T43630 201-205 UBERON:0007221 denotes ill
T69896 244-254 UBERON:0001004 denotes earch for
T89860 392-398 UBERON:0000915 denotes ARDS.
T77448 435-445 UBERON:0001004 denotes ogical cha
T47338 570-578 SP_7 denotes to 83 y
T50253 674-678 UBERON:0002048 denotes m 12
T37393 995-1009 GO:0007596 denotes ing to nondepe
T57275 1082-1088 UBERON:0001638 denotes s: acu
T97784 1089-1104 GO:0007596 denotes e fibrinous and
T2103 1125-1133 SP_7 denotes , diffus
T61739 1177-1186 UBERON:0002048 denotes of seven
T56562 1240-1248 SP_7 denotes specimen
T20701 1287-1296 SP_7 denotes losis. C
T44207 1395-1404 UBERON:0002048 denotes lassic DA
T36528 1405-1411 UBERON:0000479 denotes but h
T77817 1526-1534 SP_7 denotes -19 pati
T24460 1557-1565 UBERON:0003215 denotes D-19 ass
T11532 1644-1653 SP_7 denotes . Highli
T24720 1666-1675 UBERON:0002048 denotes ble COVID
T78382 1870-1880 GO:0016265 denotes VID-19 rel
T63890 1890-1894 UBERON:0002048 denotes orga
T40345 1895-1901 UBERON:0000479 denotes izing
T66936 2174-2182 SP_7 denotes present
T35906 2312-2324 SP_7 denotes stress syndr
T89649 2325-2335 SP_7;UBERON:0001004 denotes me (ARDS).
T80423 2336-2359 SP_7 denotes Often an atypical high
T77332 2361-2371 SP_7 denotes mpliance p
T23414 2416-2426 UBERON:0001004 denotes al ventila
T23002 2494-2504 GO:0016265 denotes acteristic
T60852 2532-2536 UBERON:0002048 denotes h lo
T36899 2586-2596 SP_7 denotes g ICU stay
T82912 2627-2648 GO:0001171 denotes bilateral patchy gro
T17380 2687-2693 UBERON:0007311 denotes sion o
T17660 2701-2708 UBERON:0004242 denotes gress t
T50696 2782-2791 GO:0007586;UBERON:0001555 denotes observed
T86112 2792-2797 UBERON:0001555 denotes featu
T42737 2821-2832 CHEBI:3638;DG_10;CHEBI:3638 denotes role in the
T83979 2967-2982 GO:0050817 denotes sm reported was
T7331 3009-3016 CHEBI:24505;CHEBI:24505 denotes dmitted
T34114 3114-3123 UBERON:0002048 denotes patients
T52553 3199-3208 UBERON:0002048 denotes ions seem
T21703 3301-3314 CHEBI:27680;CHEBI:27680 denotes nfectious dis
T97231 3316-3321 UBERON:0001977 denotes se is
T41661 3326-3332 UBERON:0007311 denotes he utm
T93902 3335-3343 UBERON:0003126 denotes importa
T75668 3347-3354 UBERON:0004242 denotes The sc
T99671 3368-3381 CHEBI:27680;CHEBI:27680 denotes le pathologic
T86981 3400-3415 UBERON:0002031 denotes patients show
T51837 3416-3422 UBERON:0004821 denotes iffuse
T19506 3456-3463 CHEBI:59132;CHEBI:59132 denotes to ARDS
T9649 3542-3551 UBERON:0002048 denotes pergillos
T41715 3773-3778 UBERON:0001977 denotes patie
T81615 3783-3794 NCBITaxon:5052 denotes with COVID
T80302 3823-3833 GO:0016265 denotes nical vent
T65199 3860-3864 UBERON:0002048 denotes c fi
T43236 3910-3920 GO:0016265 denotes logical an
T69714 3963-3968 UBERON:0000170 denotes e. Th
T56052 3990-3995 GO:0016265 denotes te to
T98173 3997-4001 UBERON:0002048 denotes ew i
T61880 4065-4073 UBERON:0001062 denotes or treat
T30595 4188-4194 UBERON:0000170 denotes spirat
T75123 4227-4235 CHEBI:16842;CHEBI:16842 denotes COV-2) a
T96536 4288-4299 CHEBI:51686;CHEBI:51686 denotes failure be
T48493 4311-4312 CHEBI:51686;CHEBI:51686 denotes c
T9930 4321-4334 CHEBI:29149;CHEBI:29149 denotes d 30 April 20
T72105 4744-4754 GO:0016265 denotes ealth and
T2841 4781-4786 UBERON:0000170 denotes its
T58291 4922-4931 UBERON:0002048 denotes Bronchosc
T96902 4958-4974 CHEBI:35705;CHEBI:35705 denotes , and testing fo
T96250 5043-5055 CHEBI:8378;CHEBI:8378 denotes ending physi
T21854 5168-5173 GO:0016265 denotes omann
T57492 5324-5333 UBERON:0002048 denotes en ELISA
T41634 5567-5579 CHEBI:10023;CHEBI:10023 denotes ion with cli
T55502 5645-5660 CHEBI:50858;CHEBI:50858 denotes Aspergillus sp
T68620 5668-5680 CHEBI:8378;CHEBI:8378 denotes red from BAL
T3137 5724-5738 CHEBI:50858;CHEBI:50858 denotes lung With per
T8024 5780-5787 CHEBI:35341;CHEBI:35341 denotes ortem c
T69823 5863-5868 UBERON:0001443 denotes Lung
T65939 5953-5962 UBERON:0002048 denotes as a refe
T56069 6024-6033 CHEBI:35341;CHEBI:35341 denotes biopsies
T93868 6080-6085 UBERON:0001443 denotes were
T38163 6119-6124 UBERON:0000170 denotes affin
T111 6485-6497 CHEBI:8378;CHEBI:8378 denotes arch Committ
T112 6604-6615 NCBITaxon:5052 denotes underwent
T113 6760-6781 NCBITaxon:746128 denotes ients had a history o
T114 6782-6794 NCBITaxon:1350 denotes (chronic) p
T115 6868-6881 NCBITaxon:1350 denotes pital admissi
T116 7020-7033 NCBITaxon:1350 denotes hospital adm
T117 7073-7083 UBERON:0001004 denotes s. Patient
T118 7107-7114 UBERON:0002186 denotes 21(rang
T119 7115-7123 UBERON:0002299 denotes 9–36) v
T120 7138-7146 SP_7 denotes In five
T121 7158-7167 UBERON:0002048 denotes n patient
T122 7196-7202 UBERON:0002113 denotes pulmo
T123 7238-7251 CHEBI:27680;CHEBI:27680 denotes definition o
T124 7274-7283 UBERON:0002048 denotes al. [9],
T125 7531-7539 UBERON:0003215 denotes ds (60 m
T126 7552-7564 CL:0000057 denotes e daily) at
T127 7585-7592 UBERON:0010210 denotes nosis a
T128 7594-7601 UBERON:0010210 denotes cortic
T129 7611-7618 UBERON:0000055 denotes reatmen
T130 7644-7656 CL:0000647;GO:0005634 denotes on for stero
T131 7657-7667 CL:0000647 denotes d treatmen
T132 7669-7680 GO:0005634 denotes in these pa
T133 7681-7698 GO:0016234 denotes ients was a suspi
T134 7838-7846 UBERON:0003215 denotes llosis w
T135 7883-7895 CL:0000647;GO:0005634 denotes before ster
T136 7896-7906 CL:0000647 denotes id treatme
T137 7908-7919 GO:0005634 denotes was starte
T138 7920-7936 GO:0016234 denotes . Radiologic fin
T139 8056-8065 GO:0016020 denotes ent chara
T140 8082-8090 UBERON:0003215 denotes inical c
T141 8091-8103 CL:0000057 denotes urse. Case S
T142 8116-8123 UBERON:0010210 denotes s) Medi
T143 8150-8162 CL:0000647;GO:0005634 denotes days Total v
T144 8163-8173 CL:0000647 denotes ntilated d
T145 8175-8186 GO:0005634 denotes s Berlin cl
T146 8187-8203 GO:0016234 denotes ssification of A
T147 8316-8324 UBERON:0003215 denotes use dur
T148 8325-8338 CL:0000057 denotes ng hospital a
T149 8339-8345 UBERON:0000479 denotes missio
T150 8406-8414 UBERON:0003215 denotes e Low Ye
T151 8415-8420 UBERON:0003037 denotes GM n
T152 8428-8435 UBERON:0010210 denotes No Yes
T153 8461-8473 CL:0000647;GO:0005634 denotes re High Yes
T154 8474-8484 CL:0000647 denotes M index 4.
T155 8486-8497 GO:0005634 denotes (day 19) As
T156 8498-8514 GO:0016234 denotes ergillus fumigat
T157 8554-8562 UBERON:0003215 denotes 0 26 Sev
T158 8575-8587 CL:0000057 denotes M index 3.4
T159 8608-8615 UBERON:0010210 denotes Yes 5 
T160 8641-8653 GO:0005634;CL:0000647 denotes derate Low Y
T161 8654-8664 CL:0000647 denotes s GM index
T162 8666-8677 GO:0005634 denotes .7 (day 1)
T163 8678-8694 GO:0016234 denotes spergillus fumig
T164 8732-8740 UBERON:0003215 denotes No 5 M,
T165 8753-8765 CL:0000057 denotes 2 21 Moderat
T166 8792-8800 UBERON:0003215 denotes 20) Ente
T167 8801-8806 UBERON:0003037 denotes ococc
T168 8814-8821 UBERON:0010210 denotes um Prob
T169 8847-8859 GO:0005634;CL:0000647 denotes 3 HT, DM 13
T170 8860-8870 CL:0000647 denotes Moderate
T171 8872-8883 GO:0005634 denotes w No GM ind
T172 8884-8900 GO:0016234 denotes x 1.7 (day 11) P
T173 8983-8991 UBERON:0003215 denotes faecali
T174 9004-9016 CL:0000057 denotes s Yes 4 days
T175 9049-9057 UBERON:0003215 denotes syndrome
T176 9058-9063 UBERON:0003037 denotes BAL
T177 9071-9078 UBERON:0010210 denotes alveola
T178 9104-9116 GO:0005634;CL:0000647 denotes ssociated pu
T179 9117-9127 CL:0000647 denotes monary asp
T180 9129-9140 GO:0005634 denotes gillosis; C
T181 9141-9157 GO:0016234 denotes I, chronic kidne
T182 9229-9237 UBERON:0003215 denotes pulmona
T183 9303-9312 UBERON:0002048 denotes indings.
T5690 9387-9397 UBERON:0001004 denotes O, crazy p
T89823 9417-9428 UBERON:0002299 denotes consolidat
T6849 9429-9444 UBERON:0002299 denotes on, subpleural
T71154 9452-9460 SP_7 denotes segment
T14667 9472-9481 UBERON:0002048 denotes gmental P
T66720 9510-9516 UBERON:0002113 denotes fibrob
T11317 9588-9597 UBERON:0002048 denotes a with at
T28427 9735-9743 UBERON:0003215 denotes segment
T80397 9809-9818 UBERON:0002048 denotes olar stru
T193 10316-10321 UBERON:0001443 denotes stic
T73310 10380-10385 UBERON:0001443 denotes ning
T195 10456-10466 UBERON:0003893 denotes ed giant c
T196 10516-10520 UBERON:0004096 denotes 5 G
T197 10585-10590 UBERON:0000170 denotes (32%)
T198 11160-11165 UBERON:0001443 denotes n bod
T199 11224-11229 UBERON:0001443 denotes onia,
T200 11297-11307 UBERON:0003893 denotes zing pneum
T201 11356-11360 UBERON:0004096 denotes te h
T202 11427-11432 UBERON:0000170 denotes of f
T203 12116-12121 UBERON:0001443 denotes g pat
T15177 12238-12248 UBERON:0002106 denotes ore pronou
T205 12422-12427 UBERON:0002113 denotes ed cy
T36509 12446-12451 UBERON:0002113 denotes middl
T207 12528-12533 UBERON:0001443 denotes eral
T30186 12556-12567 UBERON:0002048 denotes d bronchiec
T209 12641-12645 UBERON:0004096 denotes ific
T210 12774-12784 UBERON:0001016 denotes al chest C
T211 12812-12816 UBERON:0000033 denotes are
T212 12826-12831 UBERON:0000955 denotes nd-gl
T213 12912-12927 UBERON:0001636 denotes dependant conso
T214 12941-12945 GO:0016265 denotes area
T215 12971-12981 GO:0016265 denotes (Fig. 1-1A
T216 13049-13053 UBERON:0002048 denotes y su
T217 13054-13060 UBERON:0000479 denotes port a
T81145 13124-13136 CL:0000057 denotes rapy was ini
T219 13163-13170 UBERON:0003215 denotes echanic
T220 13188-13199 CL:0000235 denotes st CT-angio
T221 13234-13238 UBERON:0002048 denotes g wi
T222 13239-13245 UBERON:0000479 denotes h new
T223 13331-13339 UBERON:0003215 denotes ir-bronc
T224 13392-13407 UBERON:0001981 denotes out by bronchi
T225 13415-13423 UBERON:0003215 denotes re. Pati
T226 13424-13429 UBERON:0003037 denotes nt's
T28263 13466-13474 UBERON:0010210 denotes head re
T40605 13493-13499 UBERON:0000055 denotes ia due
T229 13565-13574 UBERON:0000483 denotes r cerebra
T34853 13604-13613 SP_7 denotes days afte
T231 13628-13633 NCBITaxon:4751 denotes stmor
T232 13755-13759 UBERON:0002048 denotes amo
T233 13787-13795 UBERON:0003215 denotes lastic b
T234 13796-13808 CL:0000057 denotes dies was pre
T235 13856-13857 CHEBI:51686;CHEBI:51686 denotes
T236 13885-13893 UBERON:0003215 denotes olved lu
T237 13930-13931 CHEBI:51686;CHEBI:51686 denotes
T74625 13980-13989 CL:0000775 denotes ominent a
T239 13994-14005 CL:0000542 denotes ar fibrinou
T79223 14067-14075 UBERON:0003215 denotes he alveo
T241 14085-14086 CHEBI:51686;CHEBI:51686 denotes w
T242 14137-14144 UBERON:0003215 denotes rger si
T243 14162-14163 CHEBI:51686;CHEBI:51686 denotes E
T244 14175-14183 UBERON:0010210 denotes logic fi
T245 14194-14200 UBERON:0000055 denotes his ca
T246 14202-14203 CHEBI:51686;CHEBI:51686 denotes
T247 14241-14252 CL:0000322 denotes lar phenoty
T55890 14260-14265 NCBITaxon:10239 denotes SARS-
T46051 14308-14320 GO:0005634;CL:0000647 denotes PAS-D stain
T11789 14321-14332 CL:0000647 denotes This histo
T23332 14346-14357 GO:0005634 denotes is characte
T84342 14358-14374 GO:0016234 denotes istic for an org
T253 14376-14377 CHEBI:51686;CHEBI:51686 denotes i
T81672 14412-14416 UBERON:0002048 denotes lung
T27688 14444-14452 UBERON:0003215 denotes alveolar
T256 14453-14465 CL:0000057 denotes fibroblastic
T1033 14513-14514 CHEBI:51686;CHEBI:51686 denotes H
T258 14542-14550 UBERON:0003215 denotes alveolar
T259 14589-14590 CHEBI:51686;CHEBI:51686 denotes H
T42968 14639-14650 CL:0000775 denotes neutrophils
T261 14655-14666 CL:0000542 denotes lymphocytes
T262 14728-14736 UBERON:0003215 denotes alveolar
T263 14746-14747 CHEBI:51686;CHEBI:51686 denotes H
T70845 14798-14805 UBERON:0003215 denotes alveoli
T265 14823-14824 CHEBI:51686;CHEBI:51686 denotes H
T266 14836-14844 UBERON:0010210 denotes thrombus
T267 14855-14861 UBERON:0000055 denotes vessel
T268 14863-14864 CHEBI:51686;CHEBI:51686 denotes H
T269 14901-14912 CL:0000322 denotes pneumocytes
T29843 14920-14925 NCBITaxon:10239 denotes viral
T271 14968-14982 GO:0005634;CL:0000647 denotes multinucleated
T25696 14983-14994 CL:0000647 denotes giant cells
T273 15008-15020 GO:0005634 denotes intranuclear
T99425 15021-15037 GO:0016234 denotes inclusion bodies
T275 15039-15040 CHEBI:51686;CHEBI:51686 denotes H
T62375 15278-15283 UBERON:0001443 denotes chest
T96861 15480-15485 UBERON:3010752 denotes lobes
T278 15557-15568 UBERON:0001004 denotes respiratory
T890 15660-15672 CHEBI:8378;CHEBI:8378 denotes prednisolone
T280 15734-15739 UBERON:0001443 denotes chest
T281 15772-15781 UBERON:0002048 denotes pulmonary
T3895 15796-15806 UBERON:0002167 denotes right lung
T283 16068-16074 NCBITaxon:4751 denotes fungal
T96203 16114-16128 CHEBI:24261;CHEBI:24261 denotes glucocorticoid
T285 16208-16229 NCBITaxon:746128 denotes Aspergillus fumigatus
T42190 16242-16254 CHEBI:8378;CHEBI:8378 denotes prednisolone
T85772 16321-16325 UBERON:0000033 denotes head
T288 16435-16448 UBERON:0016525 denotes frontal lobes
T90302 16450-16460 UBERON:0001016 denotes Neurologic
T55602 16496-16504 UBERON:0001893 denotes cerebral
T84549 16533-16537 UBERON:0000033 denotes head
T87751 16686-16690 UBERON:0002048 denotes lung
T56185 16691-16697 UBERON:0000479 denotes tissue
T88680 16752-16756 UBERON:0002048 denotes lung
T295 16771-16779 UBERON:0003215 denotes Alveolar
T296 16892-16903 CL:0000322 denotes pneumocytes
T297 16905-16925 UBERON:0002031 denotes bronchial epithelium
T87358 16931-16944 UBERON:0001981 denotes blood vessels
T299 16984-16989 NCBITaxon:4751 denotes fungi
T300 17046-17055 UBERON:0002048 denotes pulmonary
T301 17089-17097 UBERON:0003215 denotes alveolar
T302 17270-17279 UBERON:0002048 denotes pulmonary
T303 17527-17536 UBERON:0002048 denotes pulmonary
T304 17640-17649 UBERON:0002048 denotes pulmonary
T305 17854-17858 UBERON:0002048 denotes lung
T306 17899-17910 UBERON:0001004 denotes respiratory
T84520 17975-17987 CHEBI:8378;CHEBI:8378 denotes prednisolone
T78423 18017-18029 CHEBI:8378;CHEBI:8378 denotes prednisolone
T309 18098-18103 UBERON:0006314 denotes fluid
T65961 18150-18161 UBERON:0001004 denotes respiratory
T311 18272-18276 UBERON:0000033 denotes head
T312 18347-18357 UBERON:0001016 denotes neurologic
T66590 18362-18373 UBERON:0001004 denotes respiratory
T314 18417-18424 GO:0016265 denotes expired
T315 18502-18506 UBERON:0002048 denotes lung
T316 18507-18513 UBERON:0000479 denotes tissue
T317 18632-18643 CL:0000775 denotes neutrophils
T40311 18648-18659 CL:0000542 denotes lymphocytes
T61749 18687-18695 UBERON:0003215 denotes alveolar
T93849 18696-18708 CL:0000057 denotes fibroblastic
T97596 18709-18713 UBERON:0010148 denotes plug
T49760 18825-18838 UBERON:0004894 denotes alveolar wall
T73271 18863-18870 UBERON:0010210 denotes thrombi
T36662 18902-18907 NCBITaxon:4751 denotes fungi
T978 19047-19055 UBERON:0003215 denotes alveolar
T31499 19287-19299 UBERON:0001852 denotes endotracheal
T16403 19371-19382 GO:0015671 denotes oxygenation
T14517 19474-19495 NCBITaxon:746128 denotes Aspergillus fumigatus
T4434 19500-19520 NCBITaxon:1352 denotes Enterococcus faecium
T32949 19615-19624 UBERON:0002048 denotes pulmonary
T23048 19937-19941 UBERON:0000033 denotes head
T39092 19969-19979 UBERON:0002037 denotes cerebellar
T74431 20073-20084 UBERON:0001004 denotes respiratory
T28835 20243-20247 UBERON:0002048 denotes lung
T46508 20310-20318 UBERON:0003215 denotes alveolar
T32950 20334-20346 CL:0000057 denotes fibroblastic
T85905 20347-20353 UBERON:0000479 denotes tissue
T72453 20474-20481 UBERON:0003215 denotes alveoli
T83892 20647-20659 UBERON:0005169 denotes interstitial
T50871 20691-20699 UBERON:0003215 denotes alveolar
T65185 20700-20705 UBERON:0003037 denotes septa
T3448 20729-20735 UBERON:0003037 denotes septal
T58151 20736-20749 UBERON:0001981 denotes blood vessels
T66331 20795-20804 GO:0016020 denotes membranes
T96825 20819-20830 CL:0000771 denotes eosinophils
T62230 20885-20890 NCBITaxon:4751 denotes fungi
T54582 21369-21379 GO:0016265 denotes postmortem
T8919 21391-21399 SP_7 denotes COVID-19
T4529 21562-21570 SP_7 denotes COVID-19
T200 21658-21668 GO:0016265 denotes postmortem
T67683 21754-21763 UBERON:0002048 denotes pulmonary
T43328 21915-21919 UBERON:0002048 denotes lung
T86829 21987-21996 GO:0016020 denotes membranes
T8625 22546-22550 GO:0016265 denotes died
T78237 22684-22688 UBERON:0002048 denotes lung
T1261 22707-22712 NCBITaxon:10239 denotes viral
T15029 22728-22732 CHEBI:23888;CHEBI:23888 denotes drug
T10447 22908-22918 GO:0016265 denotes postmortem
T28202 23332-23340 UBERON:0003215 denotes alveolar
T67241 23341-23351 UBERON:0000483 denotes epithelial
T46717 23373-23383 UBERON:0000483 denotes epithelial
T39595 23417-23423 UBERON:0001969 denotes plasma
T44394 23516-23526 CL:0000057 denotes fibroblast
T2531 23543-23560 UBERON:0002384 denotes connective tissue
T32839 23565-23575 CL:0000057 denotes fibroblast
T79081 23608-23616 UBERON:0003215 denotes alveolar
T12939 23633-23644 UBERON:0001986 denotes endothelial
T13532 23660-23664 PR:000017284 denotes VEGF
T23839 23670-23675 PR:000007489 denotes basic
T30589 23676-23686 PR:000007489;CL:0000057 denotes fibroblast
T89725 23687-23700 PR:000007489 denotes growth factor
T29099 23702-23706 PR:000007489 denotes bFGF
T15310 23767-23776 GO:0010467 denotes expressed
T77776 23868-23872 G_3;PG_10;PR:000003622 denotes ACE2
T89521 23927-23937 SP_7 denotes SARS-CoV-2
T94964 23947-23955 UBERON:0003215;CL:0002063 denotes alveolar
T33665 23956-23969 CL:0002063 denotes type II cells
T65073 23992-23996 G_3;PG_10;PR:000003622 denotes ACE2
T27805 24004-24012 GO:0016020 denotes membrane
T1917 24014-24019 G_3;PG_10;PR:000003622 denotes ACE 2
T72517 24051-24056 PR:000013883 denotes renin
T33758 24104-24108 G_3;PG_10;PR:000003622 denotes ACE2
T15813 24163-24175 CL:0000057 denotes Fibroblastic
T57972 24191-24195 G_3;PG_10;PR:000003622 denotes ACE2
T76591 24217-24227 GO:0065007 denotes regulating
T13299 24277-24281 G_3;PG_10;PR:000003622 denotes ACE2
T40299 24310-24314 PR:000014459;SP_10 denotes SARS
T99881 24324-24328 G_3;PG_10;PR:000003622 denotes ACE2
T48386 24370-24377 SP_7 denotes COVID19
T31074 24529-24540 CHEBI:3638;DG_10;CHEBI:3638 denotes chloroquine
T67713 24653-24664 CHEBI:3638;DG_10;CHEBI:3638 denotes chloroquine
T74030 24688-24702 UBERON:0004535 denotes cardiovascular
T32076 24714-24723 UBERON:0002048 denotes pulmonary
T44763 24743-24747 CHEBI:23888;CHEBI:23888 denotes drug
T34378 24756-24768 UBERON:0005169 denotes interstitial
T84677 24769-24773 UBERON:0002048 denotes lung
T50624 24971-24976 UBERON:0001443 denotes chest
T95144 25512-25520 CHEBI:35341;CHEBI:35341 denotes steroids
T65216 25583-25593 SP_7 denotes SARS-CoV-2
T70513 25649-25656 SP_7 denotes COVID19
T50661 25898-25905 CHEBI:35341;CHEBI:35341 denotes steroid
T1274 25954-25963 UBERON:0002048 denotes pulmonary
T20843 26188-26199 UBERON:0001004 denotes respiratory
T97014 26243-26251 SP_7 denotes COVID-19
T17239 26263-26272 UBERON:0002048 denotes pulmonary
T71303 26465-26469 UBERON:0002048 denotes lung
T6825 26492-26500 UBERON:0003215 denotes alveolar
T25322 26501-26513 UBERON:0005169 denotes interstitial
T67396 26528-26533 NCBITaxon:10239;GO:0006260 denotes viral
T64030 26534-26545 GO:0006260 denotes replication
T44953 26596-26609 CL:0000084 denotes T-lymphocytes
T10487 26610-26613 PR:000001004 denotes CD4
T16256 26616-26617 CL:0000084 denotes T
T88507 26628-26635 CL:0000084 denotes T cells
T44754 26669-26673 UBERON:0002048 denotes lung
T6142 26674-26680 UBERON:0000479 denotes tissue
T56681 26858-26866 SP_7 denotes COVID-19
T69906 26928-26936 SP_7 denotes COVID-19
T31928 26948-26957 UBERON:0002048 denotes pulmonary
T12557 27009-27014 UBERON:0006314 denotes fluid
T71459 27015-27028 CHEBI:27680;CHEBI:27680 denotes galactomannan
T45354 27157-27161 UBERON:0002048 denotes lung
T56788 27248-27257 UBERON:0002048 denotes pulmonary
T54417 27457-27463 GO:0016265 denotes deaths
T81328 27514-27523 NCBITaxon:2 denotes bacterial
T86074 27717-27728 UBERON:0001004 denotes respiratory
T651 27913-27920 CHEBI:35341;CHEBI:35341 denotes steroid
T4174 28035-28044 UBERON:0002048 denotes pulmonary
T25225 28045-28051 UBERON:0000479 denotes tissue
T44391 28170-28180 GO:0016265 denotes postmortem
T63222 28194-28204 GO:0016265 denotes postmortem
T93307 28223-28227 UBERON:0002048 denotes lung
T69193 28386-28394 SP_7 denotes COVID-19
T73836 28478-28488 SP_7 denotes SARS-CoV-2
T38538 28608-28617 UBERON:0002048 denotes pulmonary
T75291 28643-28651 SP_7 denotes COVID-19
T46959 28714-28722 SP_7 denotes COVID-19
T12903 28867-28872 UBERON:0001443 denotes chest
T33307 29009-29019 GO:0016265 denotes postmortem
T59699 29081-29095 CHEBI:50858;CHEBI:50858 denotes corticosteroid
T52737 29107-29115 SP_7 denotes COVID-19
T52895 29212-29219 SP_7 denotes COVID19
T55272 29334-29341 SP_7 denotes COVID19
T20603 29353-29362 UBERON:0002048 denotes pulmonary

2_test

Id Subject Object Predicate Lexical cue
32674001-32109013-58631465 2132-2133 32109013 denotes 1
32674001-32320003-58631466 2142-2143 32320003 denotes 3
32674001-32091533-58631467 2147-2148 32091533 denotes 4
32674001-32228035-58631468 2576-2577 32228035 denotes 5
32674001-32105637-58631469 2767-2768 32105637 denotes 7
32674001-32381264-58631470 3029-3030 32381264 denotes 8
32674001-32085846-58631471 21492-21494 32085846 denotes 17
32674001-32275742-58631472 21498-21500 32275742 denotes 18
32674001-21178022-58631473 22811-22813 21178022 denotes 22
32674001-27867585-58631474 22866-22868 27867585 denotes 25
32674001-32192578-58631475 23497-23499 32192578 denotes 27
32674001-32283152-58631476 23500-23502 32283152 denotes 28
32674001-11793374-58631477 23837-23839 11793374 denotes 29
32674001-32264791-58631478 24130-24132 32264791 denotes 30
32674001-26938051-58631479 24248-24250 26938051 denotes 31
32674001-30076119-58631480 26235-26237 30076119 denotes 33
32674001-32192578-58631481 26637-26639 32192578 denotes 27
32674001-32171076-58631482 26724-26726 32171076 denotes 34
32674001-32339350-58631483 26834-26836 32339350 denotes 35
32674001-12070604-58631484 28330-28332 12070604 denotes 37