PMC:7337742 / 2003-2977
Annnotations
LitCovid-PMC-OGER-BB
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T17 | 18-29 | NCBITaxon:11118 | denotes | coronavirus |
| T18 | 44-52 | SP_7 | denotes | COVID-19 |
| T19 | 127-138 | NCBITaxon:11118 | denotes | coronavirus |
| T20 | 147-194 | SP_7 | denotes | Severe Acute Respiratory Syndrome-Coronavirus-2 |
| T21 | 196-206 | SP_7 | denotes | SARS-CoV-2 |
| T22 | 297-302 | NCBITaxon:10239 | denotes | virus |
| T23 | 453-461 | SP_7 | denotes | COVID-19 |
| T24 | 505-517 | UBERON:0005169 | denotes | interstitial |
| T61555 | 18-29 | NCBITaxon:11118 | denotes | coronavirus |
| T79368 | 44-52 | SP_7 | denotes | COVID-19 |
| T35497 | 127-138 | NCBITaxon:11118 | denotes | coronavirus |
| T34928 | 147-194 | SP_7 | denotes | Severe Acute Respiratory Syndrome-Coronavirus-2 |
| T18804 | 196-206 | SP_7 | denotes | SARS-CoV-2 |
| T37465 | 297-302 | NCBITaxon:10239 | denotes | virus |
| T85524 | 453-461 | SP_7 | denotes | COVID-19 |
| T3200 | 505-517 | UBERON:0005169 | denotes | interstitial |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T3 | 719-724 | Body_part | denotes | scale | http://purl.obolibrary.org/obo/UBERON_0002542 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 67 | 123-138 | Species | denotes | new coronavirus | Tax:2697049 |
| 68 | 147-194 | Species | denotes | Severe Acute Respiratory Syndrome-Coronavirus-2 | Tax:2697049 |
| 69 | 196-206 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 70 | 677-685 | Species | denotes | patients | Tax:9606 |
| 71 | 18-42 | Disease | denotes | coronavirus disease 2019 | MESH:C000657245 |
| 72 | 44-52 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 73 | 453-461 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 74 | 467-483 | Disease | denotes | systemic disease | MESH:D034721 |
| 75 | 518-527 | Disease | denotes | pneumonia | MESH:D011014 |
| 76 | 668-676 | Disease | denotes | infected | MESH:D007239 |
| 77 | 894-903 | Disease | denotes | infection | MESH:D007239 |
MyTest
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32584978-31978945-28904369 | 90-91 | 31978945 | denotes | 1 |
| 32584978-30349811-28904370 | 335-336 | 30349811 | denotes | 3 |
| 32584978-32251805-28904371 | 485-486 | 32251805 | denotes | 5 |
| 32584978-31986261-28904372 | 594-595 | 31986261 | denotes | 8 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T13 | 18-42 | Disease | denotes | coronavirus disease 2019 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T14 | 44-52 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T15 | 147-194 | Disease | denotes | Severe Acute Respiratory Syndrome-Coronavirus-2 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T16 | 147-180 | Disease | denotes | Severe Acute Respiratory Syndrome | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T17 | 196-204 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T18 | 453-461 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T19 | 467-483 | Disease | denotes | systemic disease | http://purl.obolibrary.org/obo/MONDO_0015938 |
| T20 | 518-527 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T21 | 894-903 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T20 | 121-122 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T21 | 297-302 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T22 | 321-322 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T23 | 409-411 | http://purl.obolibrary.org/obo/CLO_0050510 | denotes | 18 |
| T24 | 465-466 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T25 | 619-620 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T26 | 705-706 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T27 | 949-959 | http://purl.obolibrary.org/obo/CLO_0001658 | denotes | activities |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T5 | 562-566 | Chemical | denotes | gold | http://purl.obolibrary.org/obo/CHEBI_29287|http://purl.obolibrary.org/obo/CHEBI_30050 |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T1 | 518-527 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T24 | 0-93 | Sentence | denotes | In December 2019, coronavirus disease 2019 (COVID-19) was first reported in Wuhan, China [1]. |
| T25 | 94-212 | Sentence | denotes | This disease was caused by a new coronavirus, called Severe Acute Respiratory Syndrome-Coronavirus-2 (SARS-CoV-2) [2]. |
| T26 | 213-452 | Sentence | denotes | In contrast to past epidemics, which took years to spread around the world, the new virus reached Europe in a few months [3], with the first official case identified in Northern Italy on February 18 [4] and leading to the Italian outbreak. |
| T27 | 453-649 | Sentence | denotes | COVID-19 is a systemic disease [5], presenting with interstitial pneumonia (computed tomographic scan is the gold standard for diagnosis) [6–8], but it can also have a paucisymptomatic course [9]. |
| T28 | 650-904 | Sentence | denotes | The rate of newly infected patients increased daily on a logarithmic scale, especially in Lombardy, the most populated region in Italy (about 10 million inhabitants), forcing the Italian government to take extraordinary measures to contain the infection. |
| T29 | 905-974 | Sentence | denotes | Quarantine and the closure of non-essential activities were enforced. |
0_colil
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32584978-31978945-6056 | 90-91 | 31978945 | denotes | 1 |
| 32584978-30349811-6057 | 335-336 | 30349811 | denotes | 3 |
| 32584978-32251805-6058 | 485-486 | 32251805 | denotes | 5 |
| 32584978-31986261-6059 | 594-595 | 31986261 | denotes | 8 |
TEST0
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32584978-90-95-6056 | 90-91 | ["31978945"] | denotes | 1 |
| 32584978-122-127-6057 | 335-336 | ["30349811"] | denotes | 3 |
| 32584978-32-37-6058 | 485-486 | ["32251805"] | denotes | 5 |
| 32584978-141-146-6059 | 594-595 | ["31986261"] | denotes | 8 |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32584978-31978945-28904369 | 90-91 | 31978945 | denotes | 1 |
| 32584978-30349811-28904370 | 335-336 | 30349811 | denotes | 3 |
| 32584978-32251805-28904371 | 485-486 | 32251805 | denotes | 5 |
| 32584978-31986261-28904372 | 594-595 | 31986261 | denotes | 8 |