PMC:7335697 / 785-1573 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/7335697","sourcedb":"PMC","sourceid":"7335697","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7335697","text":"Results\n57 patients were included (70% male, median (IQR) age at diagnosis 65 (57–70) years). 21 (37%), 32 (56%) and 21 (37%) patients had one cardiovascular disease, arterial hypertension and diabetes mellitus, respectively. The most common symptoms were fever (79%), cough (55%), dyspnoea (46%), fatigue or myalgia (56%) and GI symptoms (33%). Immunosuppression was reduced in 22 recipients (37%) and discontinued in 4 (7%). With this regard, no impact on outcome was observed. Forty-one (72%) subjects were hospitalised and 11 (19%) developed acute respiratory distress syndrome. Overall, we estimated a case fatality rate of 12% (95% CI 5% to 24%), which increased to 17% (95% CI 7% to 32%) among hospitalised patients. Five out of the seven patients who died had a history of cancer.","divisions":[{"label":"title","span":{"begin":0,"end":7}}],"tracks":[{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T11","span":{"begin":143,"end":165},"obj":"Disease"},{"id":"T12","span":{"begin":176,"end":188},"obj":"Disease"},{"id":"T13","span":{"begin":193,"end":210},"obj":"Disease"},{"id":"T14","span":{"begin":546,"end":581},"obj":"Disease"},{"id":"T15","span":{"begin":552,"end":581},"obj":"Disease"},{"id":"T16","span":{"begin":781,"end":787},"obj":"Disease"}],"attributes":[{"id":"A11","pred":"mondo_id","subj":"T11","obj":"http://purl.obolibrary.org/obo/MONDO_0004995"},{"id":"A12","pred":"mondo_id","subj":"T12","obj":"http://purl.obolibrary.org/obo/MONDO_0005044"},{"id":"A13","pred":"mondo_id","subj":"T13","obj":"http://purl.obolibrary.org/obo/MONDO_0005015"},{"id":"A14","pred":"mondo_id","subj":"T14","obj":"http://purl.obolibrary.org/obo/MONDO_0006502"},{"id":"A15","pred":"mondo_id","subj":"T15","obj":"http://purl.obolibrary.org/obo/MONDO_0009971"},{"id":"A16","pred":"mondo_id","subj":"T16","obj":"http://purl.obolibrary.org/obo/MONDO_0004992"},{"subj":"T11","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T12","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T13","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T14","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T15","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T16","pred":"source","obj":"LitCovid-PD-MONDO"}]},{"project":"LitCovid-PD-CLO","denotations":[{"id":"T12","span":{"begin":39,"end":43},"obj":"http://purl.obolibrary.org/obo/UBERON_0003101"},{"id":"T13","span":{"begin":39,"end":43},"obj":"http://www.ebi.ac.uk/efo/EFO_0000970"},{"id":"T14","span":{"begin":167,"end":175},"obj":"http://purl.obolibrary.org/obo/UBERON_0001637"},{"id":"T15","span":{"begin":167,"end":175},"obj":"http://www.ebi.ac.uk/efo/EFO_0000814"},{"id":"T16","span":{"begin":379,"end":381},"obj":"http://purl.obolibrary.org/obo/CLO_0050507"},{"id":"T17","span":{"begin":527,"end":529},"obj":"http://purl.obolibrary.org/obo/CLO_0053733"},{"id":"T18","span":{"begin":605,"end":606},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T19","span":{"begin":768,"end":769},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"}],"attributes":[{"subj":"T12","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T13","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T14","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T15","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T16","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T17","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T18","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T19","pred":"source","obj":"LitCovid-PD-CLO"}]},{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T1","span":{"begin":39,"end":43},"obj":"Chemical"},{"id":"T2","span":{"begin":327,"end":329},"obj":"Chemical"}],"attributes":[{"id":"A1","pred":"chebi_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/CHEBI_30780"},{"id":"A2","pred":"chebi_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/CHEBI_73907"},{"subj":"T1","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T2","pred":"source","obj":"LitCovid-PD-CHEBI"}]},{"project":"LitCovid-PubTator","denotations":[{"id":"30","span":{"begin":327,"end":329},"obj":"Gene"},{"id":"31","span":{"begin":11,"end":19},"obj":"Species"},{"id":"32","span":{"begin":126,"end":134},"obj":"Species"},{"id":"33","span":{"begin":714,"end":722},"obj":"Species"},{"id":"34","span":{"begin":746,"end":754},"obj":"Species"},{"id":"35","span":{"begin":143,"end":165},"obj":"Disease"},{"id":"36","span":{"begin":167,"end":188},"obj":"Disease"},{"id":"37","span":{"begin":193,"end":210},"obj":"Disease"},{"id":"38","span":{"begin":256,"end":261},"obj":"Disease"},{"id":"39","span":{"begin":269,"end":274},"obj":"Disease"},{"id":"40","span":{"begin":282,"end":290},"obj":"Disease"},{"id":"41","span":{"begin":298,"end":305},"obj":"Disease"},{"id":"42","span":{"begin":309,"end":316},"obj":"Disease"},{"id":"43","span":{"begin":546,"end":581},"obj":"Disease"},{"id":"44","span":{"begin":759,"end":763},"obj":"Disease"},{"id":"45","span":{"begin":781,"end":787},"obj":"Disease"}],"attributes":[{"id":"A30","pred":"tao:has_database_id","subj":"30","obj":"Gene:2770"},{"id":"A31","pred":"tao:has_database_id","subj":"31","obj":"Tax:9606"},{"id":"A32","pred":"tao:has_database_id","subj":"32","obj":"Tax:9606"},{"id":"A33","pred":"tao:has_database_id","subj":"33","obj":"Tax:9606"},{"id":"A34","pred":"tao:has_database_id","subj":"34","obj":"Tax:9606"},{"id":"A35","pred":"tao:has_database_id","subj":"35","obj":"MESH:D002318"},{"id":"A36","pred":"tao:has_database_id","subj":"36","obj":"MESH:D000081029"},{"id":"A37","pred":"tao:has_database_id","subj":"37","obj":"MESH:D003920"},{"id":"A38","pred":"tao:has_database_id","subj":"38","obj":"MESH:D005334"},{"id":"A39","pred":"tao:has_database_id","subj":"39","obj":"MESH:D003371"},{"id":"A40","pred":"tao:has_database_id","subj":"40","obj":"MESH:D004417"},{"id":"A41","pred":"tao:has_database_id","subj":"41","obj":"MESH:D005221"},{"id":"A42","pred":"tao:has_database_id","subj":"42","obj":"MESH:D063806"},{"id":"A43","pred":"tao:has_database_id","subj":"43","obj":"MESH:D012128"},{"id":"A44","pred":"tao:has_database_id","subj":"44","obj":"MESH:D003643"},{"id":"A45","pred":"tao:has_database_id","subj":"45","obj":"MESH:D009369"},{"subj":"30","pred":"source","obj":"LitCovid-PubTator"},{"subj":"31","pred":"source","obj":"LitCovid-PubTator"},{"subj":"32","pred":"source","obj":"LitCovid-PubTator"},{"subj":"33","pred":"source","obj":"LitCovid-PubTator"},{"subj":"34","pred":"source","obj":"LitCovid-PubTator"},{"subj":"35","pred":"source","obj":"LitCovid-PubTator"},{"subj":"36","pred":"source","obj":"LitCovid-PubTator"},{"subj":"37","pred":"source","obj":"LitCovid-PubTator"},{"subj":"38","pred":"source","obj":"LitCovid-PubTator"},{"subj":"39","pred":"source","obj":"LitCovid-PubTator"},{"subj":"40","pred":"source","obj":"LitCovid-PubTator"},{"subj":"41","pred":"source","obj":"LitCovid-PubTator"},{"subj":"42","pred":"source","obj":"LitCovid-PubTator"},{"subj":"43","pred":"source","obj":"LitCovid-PubTator"},{"subj":"44","pred":"source","obj":"LitCovid-PubTator"},{"subj":"45","pred":"source","obj":"LitCovid-PubTator"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}]},{"project":"LitCovid-PD-HP","denotations":[{"id":"T1","span":{"begin":143,"end":165},"obj":"Phenotype"},{"id":"T2","span":{"begin":176,"end":188},"obj":"Phenotype"},{"id":"T3","span":{"begin":193,"end":210},"obj":"Phenotype"},{"id":"T4","span":{"begin":256,"end":261},"obj":"Phenotype"},{"id":"T5","span":{"begin":269,"end":274},"obj":"Phenotype"},{"id":"T6","span":{"begin":282,"end":290},"obj":"Phenotype"},{"id":"T7","span":{"begin":298,"end":305},"obj":"Phenotype"},{"id":"T8","span":{"begin":309,"end":316},"obj":"Phenotype"},{"id":"T9","span":{"begin":552,"end":572},"obj":"Phenotype"},{"id":"T10","span":{"begin":781,"end":787},"obj":"Phenotype"}],"attributes":[{"id":"A1","pred":"hp_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/HP_0001626"},{"id":"A2","pred":"hp_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/HP_0000822"},{"id":"A3","pred":"hp_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/HP_0000819"},{"id":"A4","pred":"hp_id","subj":"T4","obj":"http://purl.obolibrary.org/obo/HP_0001945"},{"id":"A5","pred":"hp_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/HP_0012735"},{"id":"A6","pred":"hp_id","subj":"T6","obj":"http://purl.obolibrary.org/obo/HP_0002094"},{"id":"A7","pred":"hp_id","subj":"T7","obj":"http://purl.obolibrary.org/obo/HP_0012378"},{"id":"A8","pred":"hp_id","subj":"T8","obj":"http://purl.obolibrary.org/obo/HP_0003326"},{"id":"A9","pred":"hp_id","subj":"T9","obj":"http://purl.obolibrary.org/obo/HP_0002098"},{"id":"A10","pred":"hp_id","subj":"T10","obj":"http://purl.obolibrary.org/obo/HP_0002664"},{"subj":"T1","pred":"source","obj":"LitCovid-PD-HP"},{"subj":"T2","pred":"source","obj":"LitCovid-PD-HP"},{"subj":"T3","pred":"source","obj":"LitCovid-PD-HP"},{"subj":"T4","pred":"source","obj":"LitCovid-PD-HP"},{"subj":"T5","pred":"source","obj":"LitCovid-PD-HP"},{"subj":"T6","pred":"source","obj":"LitCovid-PD-HP"},{"subj":"T7","pred":"source","obj":"LitCovid-PD-HP"},{"subj":"T8","pred":"source","obj":"LitCovid-PD-HP"},{"subj":"T9","pred":"source","obj":"LitCovid-PD-HP"},{"subj":"T10","pred":"source","obj":"LitCovid-PD-HP"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T9","span":{"begin":0,"end":7},"obj":"Sentence"},{"id":"T10","span":{"begin":8,"end":93},"obj":"Sentence"},{"id":"T11","span":{"begin":94,"end":225},"obj":"Sentence"},{"id":"T12","span":{"begin":226,"end":345},"obj":"Sentence"},{"id":"T13","span":{"begin":346,"end":426},"obj":"Sentence"},{"id":"T14","span":{"begin":427,"end":479},"obj":"Sentence"},{"id":"T15","span":{"begin":480,"end":582},"obj":"Sentence"},{"id":"T16","span":{"begin":583,"end":723},"obj":"Sentence"},{"id":"T17","span":{"begin":724,"end":788},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T9","pred":"source","obj":"LitCovid-sentences"},{"subj":"T10","pred":"source","obj":"LitCovid-sentences"},{"subj":"T11","pred":"source","obj":"LitCovid-sentences"},{"subj":"T12","pred":"source","obj":"LitCovid-sentences"},{"subj":"T13","pred":"source","obj":"LitCovid-sentences"},{"subj":"T14","pred":"source","obj":"LitCovid-sentences"},{"subj":"T15","pred":"source","obj":"LitCovid-sentences"},{"subj":"T16","pred":"source","obj":"LitCovid-sentences"},{"subj":"T17","pred":"source","obj":"LitCovid-sentences"}]},{"project":"LitCovid-PMC-OGER-BB","denotations":[{"id":"T14","span":{"begin":143,"end":157},"obj":"UBERON:0004535"},{"id":"T15","span":{"begin":167,"end":175},"obj":"UBERON:0001637"},{"id":"T16","span":{"begin":269,"end":274},"obj":"UBERON:0002048"},{"id":"T17","span":{"begin":552,"end":563},"obj":"UBERON:0001004"},{"id":"T18","span":{"begin":759,"end":763},"obj":"GO:0016265"},{"id":"T83298","span":{"begin":143,"end":157},"obj":"UBERON:0004535"},{"id":"T78892","span":{"begin":167,"end":175},"obj":"UBERON:0001637"},{"id":"T26763","span":{"begin":269,"end":274},"obj":"UBERON:0002048"},{"id":"T87463","span":{"begin":552,"end":563},"obj":"UBERON:0001004"},{"id":"T78449","span":{"begin":759,"end":763},"obj":"GO:0016265"}],"attributes":[{"subj":"T14","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T15","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T16","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T17","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T18","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T83298","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T78892","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T26763","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T87463","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T78449","pred":"source","obj":"LitCovid-PMC-OGER-BB"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PD-MONDO","color":"#eca893","default":true},{"id":"LitCovid-PD-CLO","color":"#9397ec"},{"id":"LitCovid-PD-CHEBI","color":"#b1ec93"},{"id":"LitCovid-PubTator","color":"#ec93cb"},{"id":"LitCovid-PD-HP","color":"#93e5ec"},{"id":"LitCovid-sentences","color":"#ecd893"},{"id":"LitCovid-PMC-OGER-BB","color":"#be93ec"}]}]}}