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PMC:7335494 / 22168-31754 JSONTXT

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LitCovid_Glycan-Motif-Structure

Id Subject Object Predicate Lexical cue
T17 123-130 https://glytoucan.org/Structures/Glycans/G15021LG denotes glucose
T18 5758-5765 https://glytoucan.org/Structures/Glycans/G15021LG denotes glucose
T19 8492-8499 https://glytoucan.org/Structures/Glycans/G15021LG denotes glucose

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T192 21-33 Body_part denotes carbohydrate http://purl.org/sig/ont/fma/fma82737
T193 123-130 Body_part denotes glucose http://purl.org/sig/ont/fma/fma82743
T194 178-183 Body_part denotes lipid http://purl.org/sig/ont/fma/fma67264
T195 228-233 Body_part denotes liver http://purl.org/sig/ont/fma/fma7197
T196 419-423 Body_part denotes IL-1 http://purl.org/sig/ont/fma/fma86583
T197 617-628 Body_part denotes spinal cord http://purl.org/sig/ont/fma/fma7647
T198 825-829 Body_part denotes IL-1 http://purl.org/sig/ont/fma/fma86583
T199 1360-1364 Body_part denotes body http://purl.org/sig/ont/fma/fma256135
T200 1373-1378 Body_part denotes serum http://purl.org/sig/ont/fma/fma63083
T201 1974-1981 Body_part denotes insulin http://purl.org/sig/ont/fma/fma83365
T202 2614-2621 Body_part denotes insulin http://purl.org/sig/ont/fma/fma83365
T203 2907-2911 Body_part denotes IL-1 http://purl.org/sig/ont/fma/fma86583
T204 3044-3056 Body_part denotes carbohydrate http://purl.org/sig/ont/fma/fma82737
T205 3112-3117 Body_part denotes Heart http://purl.org/sig/ont/fma/fma7088
T206 3265-3268 Body_part denotes LPS http://purl.org/sig/ont/fma/fma82785
T207 3314-3318 Body_part denotes IL-1 http://purl.org/sig/ont/fma/fma86583
T208 3964-3973 Body_part denotes cellulose http://purl.org/sig/ont/fma/fma82748
T209 4037-4046 Body_part denotes cellulose http://purl.org/sig/ont/fma/fma82748
T210 4255-4266 Body_part denotes fatty acids http://purl.org/sig/ont/fma/fma82738
T211 4288-4299 Body_part denotes fatty acids http://purl.org/sig/ont/fma/fma82738
T212 4325-4329 Body_part denotes IL-1 http://purl.org/sig/ont/fma/fma86583
T213 4558-4565 Body_part denotes insulin http://purl.org/sig/ont/fma/fma83365
T214 4988-4995 Body_part denotes Insulin http://purl.org/sig/ont/fma/fma83365
T215 5106-5110 Body_part denotes knee http://purl.org/sig/ont/fma/fma24974
T216 5758-5765 Body_part denotes glucose http://purl.org/sig/ont/fma/fma82743
T217 5833-5843 Body_part denotes fatty acid http://purl.org/sig/ont/fma/fma82738
T218 6275-6286 Body_part denotes fatty acids http://purl.org/sig/ont/fma/fma82738
T219 6525-6528 Body_part denotes LPS http://purl.org/sig/ont/fma/fma82785
T220 6776-6779 Body_part denotes LPS http://purl.org/sig/ont/fma/fma82785
T221 7000-7004 Body_part denotes ICAM http://purl.org/sig/ont/fma/fma67857
T222 7107-7119 Body_part denotes carbohydrate http://purl.org/sig/ont/fma/fma82737
T223 7196-7208 Body_part denotes Carbohydrate http://purl.org/sig/ont/fma/fma82737
T224 7339-7351 Body_part denotes Carbohydrate http://purl.org/sig/ont/fma/fma82737
T225 7396-7400 Body_part denotes IL-1 http://purl.org/sig/ont/fma/fma86583
T226 7404-7409 Body_part denotes cecum http://purl.org/sig/ont/fma/fma14541
T227 7422-7433 Body_part denotes fatty acids http://purl.org/sig/ont/fma/fma82738
T228 7468-7480 Body_part denotes carbohydrate http://purl.org/sig/ont/fma/fma82737
T229 7595-7602 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T230 7611-7624 Body_part denotes carbohydrates http://purl.org/sig/ont/fma/fma82737
T231 7659-7666 Body_part denotes insulin http://purl.org/sig/ont/fma/fma83365
T232 7686-7696 Body_part denotes fatty acid http://purl.org/sig/ont/fma/fma82738
T233 7697-7703 Body_part denotes plasma http://purl.org/sig/ont/fma/fma62970
T234 7773-7784 Body_part denotes spinal cord http://purl.org/sig/ont/fma/fma7647
T235 7887-7891 Body_part denotes IL-1 http://purl.org/sig/ont/fma/fma86583
T236 8099-8103 Body_part denotes IL-1 http://purl.org/sig/ont/fma/fma86583
T237 8116-8120 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T238 8224-8236 Body_part denotes carbohydrate http://purl.org/sig/ont/fma/fma82737
T239 8242-8249 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T240 8298-8310 Body_part denotes carbohydrate http://purl.org/sig/ont/fma/fma82737
T241 8350-8364 Body_part denotes polysaccharide http://purl.org/sig/ont/fma/fma82746
T242 8420-8425 Body_part denotes liver http://purl.org/sig/ont/fma/fma7197
T243 8426-8431 Body_part denotes lipid http://purl.org/sig/ont/fma/fma67264
T244 8492-8499 Body_part denotes glucose http://purl.org/sig/ont/fma/fma82743
T245 8541-8562 Body_part denotes endoplasmic reticulum http://purl.org/sig/ont/fma/fma63842
T246 8574-8579 Body_part denotes liver http://purl.org/sig/ont/fma/fma7197
T247 8586-8596 Body_part denotes macrophage http://purl.org/sig/ont/fma/fma63261
T248 8629-8633 Body_part denotes body http://purl.org/sig/ont/fma/fma256135
T249 8634-8641 Body_part denotes insulin http://purl.org/sig/ont/fma/fma83365
T250 8779-8786 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T251 8796-8809 Body_part denotes carbohydrates http://purl.org/sig/ont/fma/fma82737
T252 8835-8842 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T253 8851-8864 Body_part denotes carbohydrates http://purl.org/sig/ont/fma/fma82737
T254 8881-8885 Body_part denotes IL-1 http://purl.org/sig/ont/fma/fma86583
T255 9177-9181 Body_part denotes IL-1 http://purl.org/sig/ont/fma/fma86583
T256 9426-9430 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T257 9493-9502 Body_part denotes cytokines http://purl.org/sig/ont/fma/fma84050
T258 9507-9517 Body_part denotes macrophage http://purl.org/sig/ont/fma/fma63261

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T48 228-233 Body_part denotes liver http://purl.obolibrary.org/obo/UBERON_0002107
T49 617-628 Body_part denotes spinal cord http://purl.obolibrary.org/obo/UBERON_0002240
T50 1373-1378 Body_part denotes serum http://purl.obolibrary.org/obo/UBERON_0001977
T51 3112-3117 Body_part denotes Heart http://purl.obolibrary.org/obo/UBERON_0000948
T52 5106-5110 Body_part denotes knee http://purl.obolibrary.org/obo/UBERON_0001465
T53 7773-7784 Body_part denotes spinal cord http://purl.obolibrary.org/obo/UBERON_0002240
T54 8420-8425 Body_part denotes liver http://purl.obolibrary.org/obo/UBERON_0002107
T55 8574-8579 Body_part denotes liver http://purl.obolibrary.org/obo/UBERON_0002107

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T87 617-635 Disease denotes spinal cord injury http://purl.obolibrary.org/obo/MONDO_0043797
T88 629-635 Disease denotes injury http://purl.obolibrary.org/obo/MONDO_0021178
T89 690-702 Disease denotes inflammation http://purl.obolibrary.org/obo/MONDO_0021166
T90 1030-1037 Disease denotes obesity http://purl.obolibrary.org/obo/MONDO_0011122
T91 1186-1204 Disease denotes metabolic syndrome http://purl.obolibrary.org/obo/MONDO_0004955
T92 1498-1516 Disease denotes metabolic syndrome http://purl.obolibrary.org/obo/MONDO_0004955
T93 1766-1784 Disease denotes metabolic syndrome http://purl.obolibrary.org/obo/MONDO_0004955
T94 2057-2075 Disease denotes metabolic syndrome http://purl.obolibrary.org/obo/MONDO_0004955
T95 2480-2491 Disease denotes prediabetes http://purl.obolibrary.org/obo/MONDO_0006920
T96 2715-2733 Disease denotes metabolic syndrome http://purl.obolibrary.org/obo/MONDO_0004955
T97 3270-3273 Disease denotes FFA http://purl.obolibrary.org/obo/MONDO_0016776
T98 3574-3592 Disease denotes metabolic syndrome http://purl.obolibrary.org/obo/MONDO_0004955
T99 5111-5125 Disease denotes osteoarthritis http://purl.obolibrary.org/obo/MONDO_0005178
T100 7131-7143 Disease denotes inflammation http://purl.obolibrary.org/obo/MONDO_0021166
T101 7773-7791 Disease denotes spinal cord injury http://purl.obolibrary.org/obo/MONDO_0043797
T102 7785-7791 Disease denotes injury http://purl.obolibrary.org/obo/MONDO_0021178
T103 8492-8511 Disease denotes glucose intolerance http://purl.obolibrary.org/obo/MONDO_0001076
T104 8533-8539 Disease denotes injury http://purl.obolibrary.org/obo/MONDO_0021178
T105 8962-8983 Disease denotes Muckle-Wells Syndrome http://purl.obolibrary.org/obo/MONDO_0008633
T106 8988-9029 Disease denotes Familial Cold Autoinflammatory syndrome 1 http://purl.obolibrary.org/obo/MONDO_0007349
T107 9002-9027 Disease denotes Autoinflammatory syndrome http://purl.obolibrary.org/obo/MONDO_0019751

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T225 9-10 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T226 51-54 http://purl.obolibrary.org/obo/UBERON_0001013 denotes fat
T227 69-70 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T228 106-110 http://purl.obolibrary.org/obo/CLO_0001185 denotes 2018
T229 168-172 http://purl.obolibrary.org/obo/CLO_0001185 denotes 2018
T230 228-233 http://purl.obolibrary.org/obo/UBERON_0002107 denotes liver
T231 228-233 http://www.ebi.ac.uk/efo/EFO_0000887 denotes liver
T232 317-321 http://purl.obolibrary.org/obo/CLO_0001185 denotes 2018
T233 324-325 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T234 351-355 http://purl.obolibrary.org/obo/UBERON_0001013 denotes fats
T235 467-468 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T236 617-628 http://purl.obolibrary.org/obo/UBERON_0002240 denotes spinal cord
T237 637-638 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T238 724-725 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T239 766-770 http://purl.obolibrary.org/obo/CLO_0001185 denotes 2018
T240 779-789 http://purl.obolibrary.org/obo/CLO_0001658 denotes activating
T241 861-865 http://purl.obolibrary.org/obo/CLO_0001185 denotes 2018
T242 1328-1329 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T243 1495-1497 http://purl.obolibrary.org/obo/CLO_0053799 denotes 45
T244 1623-1624 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T245 1835-1836 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T246 1965-1970 http://purl.obolibrary.org/obo/OGG_0000000002 denotes genes
T247 1974-1981 http://purl.obolibrary.org/obo/PR_000009054 denotes insulin
T248 2209-2210 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T249 2362-2365 http://purl.obolibrary.org/obo/CLO_0001577 denotes a 3
T250 2504-2506 http://purl.obolibrary.org/obo/CLO_0053799 denotes 45
T251 2614-2621 http://purl.obolibrary.org/obo/PR_000009054 denotes insulin
T252 2651-2655 http://purl.obolibrary.org/obo/CLO_0001185 denotes 2018
T253 2835-2839 http://purl.obolibrary.org/obo/NCBITaxon_117565 denotes fish
T254 3062-3065 http://purl.obolibrary.org/obo/UBERON_0001013 denotes fat
T255 3074-3075 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T256 3112-3117 http://purl.obolibrary.org/obo/UBERON_0000948 denotes Heart
T257 3112-3117 http://purl.obolibrary.org/obo/UBERON_0007100 denotes Heart
T258 3112-3117 http://purl.obolibrary.org/obo/UBERON_0015228 denotes Heart
T259 3112-3117 http://www.ebi.ac.uk/efo/EFO_0000815 denotes Heart
T260 3639-3640 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T261 3679-3680 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T262 3694-3696 http://purl.obolibrary.org/obo/CLO_0053799 denotes 45
T263 4017-4021 http://purl.obolibrary.org/obo/CLO_0053704 denotes IL-8
T264 4141-4143 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T265 4366-4370 http://purl.obolibrary.org/obo/CLO_0001185 denotes 2018
T266 4451-4452 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T267 4468-4471 http://purl.obolibrary.org/obo/UBERON_0001013 denotes fat
T268 4542-4546 http://purl.obolibrary.org/obo/CLO_0053704 denotes IL-8
T269 4558-4565 http://purl.obolibrary.org/obo/PR_000009054 denotes insulin
T270 4810-4814 http://purl.obolibrary.org/obo/CLO_0001185 denotes 2018
T271 4920-4921 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T272 4988-4995 http://purl.obolibrary.org/obo/PR_000009054 denotes Insulin
T273 5272-5276 http://purl.obolibrary.org/obo/CLO_0001185 denotes 2018
T274 5361-5362 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T275 5377-5378 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T276 5441-5443 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T277 5613-5614 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T278 5644-5645 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T279 5899-5900 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T280 5968-5975 http://purl.obolibrary.org/obo/UBERON_0003100 denotes females
T281 6248-6251 http://purl.obolibrary.org/obo/UBERON_0001013 denotes fat
T282 6315-6318 http://purl.obolibrary.org/obo/CLO_0001562 denotes a 2
T283 6315-6318 http://purl.obolibrary.org/obo/CLO_0001563 denotes a 2
T284 6386-6390 http://purl.obolibrary.org/obo/CLO_0001185 denotes 2018
T285 6420-6427 http://purl.obolibrary.org/obo/UBERON_0003100 denotes females
T286 6589-6591 http://purl.obolibrary.org/obo/CLO_0001407 denotes 52
T287 7316-7319 http://purl.obolibrary.org/obo/UBERON_0001013 denotes fat
T288 7486-7489 http://purl.obolibrary.org/obo/UBERON_0001013 denotes fat
T289 7502-7508 http://purl.obolibrary.org/obo/UBERON_0003100 denotes Female
T290 7587-7590 http://purl.obolibrary.org/obo/UBERON_0001013 denotes fat
T291 7659-7666 http://purl.obolibrary.org/obo/PR_000009054 denotes insulin
T292 7697-7703 http://purl.obolibrary.org/obo/UBERON_0001969 denotes plasma
T293 7773-7784 http://purl.obolibrary.org/obo/UBERON_0002240 denotes spinal cord
T294 7793-7799 http://purl.obolibrary.org/obo/CLO_0007919 denotes n = 18
T295 7793-7799 http://purl.obolibrary.org/obo/CLO_0007920 denotes n = 18
T296 7929-7933 http://purl.obolibrary.org/obo/CLO_0001185 denotes 2018
T297 7950-7954 http://purl.obolibrary.org/obo/UBERON_0003101 denotes Male
T298 7950-7954 http://www.ebi.ac.uk/efo/EFO_0000970 denotes Male
T299 7969-7971 http://purl.obolibrary.org/obo/CLO_0050507 denotes 22
T300 8116-8120 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T301 8260-8263 http://purl.obolibrary.org/obo/UBERON_0001013 denotes fat
T302 8317-8320 http://purl.obolibrary.org/obo/UBERON_0001013 denotes fat
T303 8345-8348 http://purl.obolibrary.org/obo/UBERON_0001013 denotes fat
T304 8420-8425 http://purl.obolibrary.org/obo/UBERON_0002107 denotes liver
T305 8420-8425 http://www.ebi.ac.uk/efo/EFO_0000887 denotes liver
T306 8574-8579 http://purl.obolibrary.org/obo/UBERON_0002107 denotes liver
T307 8574-8579 http://www.ebi.ac.uk/efo/EFO_0000887 denotes liver
T308 8623-8633 http://purl.obolibrary.org/obo/UBERON_0013702 denotes whole-body
T309 8634-8641 http://purl.obolibrary.org/obo/PR_000009054 denotes insulin
T310 8693-8696 http://purl.obolibrary.org/obo/UBERON_0001013 denotes fat
T311 8708-8712 http://purl.obolibrary.org/obo/UBERON_0003101 denotes male
T312 8708-8712 http://www.ebi.ac.uk/efo/EFO_0000970 denotes male
T313 8771-8774 http://purl.obolibrary.org/obo/UBERON_0001013 denotes fat
T314 8827-8830 http://purl.obolibrary.org/obo/UBERON_0001013 denotes fat
T315 9078-9081 http://purl.obolibrary.org/obo/UBERON_0001013 denotes fat
T316 9205-9213 http://purl.obolibrary.org/obo/CLO_0001658 denotes activity
T317 9238-9241 http://purl.obolibrary.org/obo/UBERON_0001013 denotes fat
T318 9292-9296 http://purl.obolibrary.org/obo/UBERON_0003101 denotes male
T319 9292-9296 http://www.ebi.ac.uk/efo/EFO_0000970 denotes male
T320 9426-9430 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T321 9536-9537 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T322 9581-9585 http://purl.obolibrary.org/obo/CLO_0001185 denotes 2018

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T221 21-33 Chemical denotes carbohydrate http://purl.obolibrary.org/obo/CHEBI_16646
T222 123-130 Chemical denotes glucose http://purl.obolibrary.org/obo/CHEBI_17234|http://purl.obolibrary.org/obo/CHEBI_4167
T224 178-183 Chemical denotes lipid http://purl.obolibrary.org/obo/CHEBI_18059
T225 400-409 Chemical denotes molecules http://purl.obolibrary.org/obo/CHEBI_25367
T226 419-421 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T228 501-507 Chemical denotes ketone http://purl.obolibrary.org/obo/CHEBI_17087
T229 508-516 Chemical denotes diesters http://purl.obolibrary.org/obo/CHEBI_51307
T230 720-722 Chemical denotes NF http://purl.obolibrary.org/obo/CHEBI_141424|http://purl.obolibrary.org/obo/CHEBI_25573|http://purl.obolibrary.org/obo/CHEBI_1224
T233 755-757 Chemical denotes Lu http://purl.obolibrary.org/obo/CHEBI_33382
T234 825-827 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T236 850-852 Chemical denotes Lu http://purl.obolibrary.org/obo/CHEBI_33382
T237 1401-1403 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T239 1539-1561 Chemical denotes galactooligosaccharide http://purl.obolibrary.org/obo/CHEBI_24151
T240 1562-1569 Chemical denotes mixture http://purl.obolibrary.org/obo/CHEBI_60004
T241 1974-1981 Chemical denotes insulin http://purl.obolibrary.org/obo/CHEBI_145810
T242 2086-2098 Chemical denotes arabinoxylan http://purl.obolibrary.org/obo/CHEBI_28427
T243 2113-2119 Chemical denotes starch http://purl.obolibrary.org/obo/CHEBI_28017
T244 2194-2196 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T246 2205-2207 Chemical denotes NF http://purl.obolibrary.org/obo/CHEBI_141424|http://purl.obolibrary.org/obo/CHEBI_25573|http://purl.obolibrary.org/obo/CHEBI_1224
T249 2519-2526 Chemical denotes amylose http://purl.obolibrary.org/obo/CHEBI_28102
T250 2570-2581 Chemical denotes amylopectin http://purl.obolibrary.org/obo/CHEBI_28057
T251 2614-2621 Chemical denotes insulin http://purl.obolibrary.org/obo/CHEBI_145810
T252 2907-2909 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T254 2912-2914 Chemical denotes Ra http://purl.obolibrary.org/obo/CHEBI_33325
T255 2936-2941 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433
T256 3044-3056 Chemical denotes carbohydrate http://purl.obolibrary.org/obo/CHEBI_16646
T257 3265-3268 Chemical denotes LPS http://purl.obolibrary.org/obo/CHEBI_16412|http://purl.obolibrary.org/obo/CHEBI_52603|http://purl.obolibrary.org/obo/CHEBI_89981
T260 3270-3273 Chemical denotes FFA http://purl.obolibrary.org/obo/CHEBI_42638
T261 3314-3316 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T263 3486-3491 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433
T264 3717-3722 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433
T265 3765-3770 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433
T266 3928-3934 Chemical denotes inulin http://purl.obolibrary.org/obo/CHEBI_15443
T267 4017-4019 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T269 4047-4053 Chemical denotes Inulin http://purl.obolibrary.org/obo/CHEBI_15443
T270 4243-4266 Chemical denotes unsaturated fatty acids http://purl.obolibrary.org/obo/CHEBI_27208
T271 4255-4266 Chemical denotes fatty acids http://purl.obolibrary.org/obo/CHEBI_35366
T272 4261-4266 Chemical denotes acids http://purl.obolibrary.org/obo/CHEBI_37527
T273 4268-4273 Chemical denotes unSFA http://purl.obolibrary.org/obo/CHEBI_27208
T274 4278-4299 Chemical denotes saturated fatty acids http://purl.obolibrary.org/obo/CHEBI_26607
T275 4288-4299 Chemical denotes fatty acids http://purl.obolibrary.org/obo/CHEBI_35366
T276 4294-4299 Chemical denotes acids http://purl.obolibrary.org/obo/CHEBI_37527
T277 4301-4304 Chemical denotes SFA http://purl.obolibrary.org/obo/CHEBI_26607
T278 4318-4321 Chemical denotes SFA http://purl.obolibrary.org/obo/CHEBI_26607
T279 4325-4327 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T281 4331-4336 Chemical denotes unSFA http://purl.obolibrary.org/obo/CHEBI_27208
T282 4339-4341 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T284 4536-4538 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T286 4542-4544 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T288 4558-4565 Chemical denotes insulin http://purl.obolibrary.org/obo/CHEBI_145810
T289 4587-4589 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T291 4728-4734 Chemical denotes starch http://purl.obolibrary.org/obo/CHEBI_28017
T292 4777-4779 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T294 4905-4912 Chemical denotes dextrin http://purl.obolibrary.org/obo/CHEBI_28675
T295 4940-4952 Chemical denotes maltodextrin http://purl.obolibrary.org/obo/CHEBI_25140
T296 4967-4969 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T298 4983-4986 Chemical denotes MDA http://purl.obolibrary.org/obo/CHEBI_566274
T299 4988-4995 Chemical denotes Insulin http://purl.obolibrary.org/obo/CHEBI_5931
T300 5253-5258 Chemical denotes 4-HNE http://purl.obolibrary.org/obo/CHEBI_32585
T301 5255-5258 Chemical denotes HNE http://purl.obolibrary.org/obo/CHEBI_58968
T302 5330-5339 Chemical denotes metformin http://purl.obolibrary.org/obo/CHEBI_6801
T303 5341-5349 Chemical denotes acarbose http://purl.obolibrary.org/obo/CHEBI_2376|http://purl.obolibrary.org/obo/CHEBI_84363
T305 5429-5434 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433
T306 5438-5440 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T308 5665-5667 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T310 5758-5765 Chemical denotes glucose http://purl.obolibrary.org/obo/CHEBI_17234|http://purl.obolibrary.org/obo/CHEBI_4167
T312 5817-5843 Chemical denotes monounsaturated fatty acid http://purl.obolibrary.org/obo/CHEBI_25413
T313 5833-5843 Chemical denotes fatty acid http://purl.obolibrary.org/obo/CHEBI_35366
T314 5839-5843 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T315 5886-5891 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433
T316 5895-5897 Chemical denotes NF http://purl.obolibrary.org/obo/CHEBI_141424|http://purl.obolibrary.org/obo/CHEBI_25573|http://purl.obolibrary.org/obo/CHEBI_1224
T319 6021-6027 Chemical denotes starch http://purl.obolibrary.org/obo/CHEBI_28017
T320 6086-6088 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T322 6263-6286 Chemical denotes unsaturated fatty acids http://purl.obolibrary.org/obo/CHEBI_27208
T323 6275-6286 Chemical denotes fatty acids http://purl.obolibrary.org/obo/CHEBI_35366
T324 6281-6286 Chemical denotes acids http://purl.obolibrary.org/obo/CHEBI_37527
T325 6340-6345 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433
T326 6462-6468 Chemical denotes inulin http://purl.obolibrary.org/obo/CHEBI_15443
T327 6472-6484 Chemical denotes maltodextrin http://purl.obolibrary.org/obo/CHEBI_25140
T328 6501-6507 Chemical denotes Inulin http://purl.obolibrary.org/obo/CHEBI_15443
T329 6525-6528 Chemical denotes LPS http://purl.obolibrary.org/obo/CHEBI_16412|http://purl.obolibrary.org/obo/CHEBI_52603|http://purl.obolibrary.org/obo/CHEBI_89981
T332 6683-6689 Chemical denotes inulin http://purl.obolibrary.org/obo/CHEBI_15443
T333 6693-6705 Chemical denotes maltodextrin http://purl.obolibrary.org/obo/CHEBI_25140
T334 6751-6757 Chemical denotes Inulin http://purl.obolibrary.org/obo/CHEBI_15443
T335 6776-6779 Chemical denotes LPS http://purl.obolibrary.org/obo/CHEBI_16412|http://purl.obolibrary.org/obo/CHEBI_52603|http://purl.obolibrary.org/obo/CHEBI_89981
T338 7107-7119 Chemical denotes carbohydrate http://purl.obolibrary.org/obo/CHEBI_16646
T339 7325-7330 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433
T340 7368-7373 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433
T341 7387-7389 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T343 7396-7398 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T345 7410-7433 Chemical denotes short-chain fatty acids http://purl.obolibrary.org/obo/CHEBI_26666
T346 7422-7433 Chemical denotes fatty acids http://purl.obolibrary.org/obo/CHEBI_35366
T347 7428-7433 Chemical denotes acids http://purl.obolibrary.org/obo/CHEBI_37527
T348 7468-7480 Chemical denotes carbohydrate http://purl.obolibrary.org/obo/CHEBI_16646
T349 7530-7535 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433
T350 7595-7602 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T351 7611-7624 Chemical denotes carbohydrates http://purl.obolibrary.org/obo/CHEBI_16646
T352 7655-7657 Chemical denotes TG http://purl.obolibrary.org/obo/CHEBI_74859|http://purl.obolibrary.org/obo/CHEBI_9555
T354 7659-7666 Chemical denotes insulin http://purl.obolibrary.org/obo/CHEBI_145810
T355 7686-7696 Chemical denotes fatty acid http://purl.obolibrary.org/obo/CHEBI_35366
T356 7692-7696 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T357 7800-7805 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433
T358 7842-7844 Chemical denotes KD http://purl.obolibrary.org/obo/CHEBI_73601
T359 7863-7865 Chemical denotes SD http://purl.obolibrary.org/obo/CHEBI_74807
T360 7881-7883 Chemical denotes KD http://purl.obolibrary.org/obo/CHEBI_73601
T361 7887-7889 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T363 7918-7920 Chemical denotes Lu http://purl.obolibrary.org/obo/CHEBI_33382
T364 8038-8043 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433
T365 8044-8046 Chemical denotes KD http://purl.obolibrary.org/obo/CHEBI_73601
T366 8050-8063 Chemical denotes triglycerides http://purl.obolibrary.org/obo/CHEBI_17855
T367 8065-8076 Chemical denotes cholesterol http://purl.obolibrary.org/obo/CHEBI_16113
T368 8086-8089 Chemical denotes MCP http://purl.obolibrary.org/obo/CHEBI_132592|http://purl.obolibrary.org/obo/CHEBI_50099
T370 8093-8095 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T372 8099-8101 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T374 8224-8236 Chemical denotes carbohydrate http://purl.obolibrary.org/obo/CHEBI_16646
T375 8242-8249 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T376 8280-8282 Chemical denotes KD http://purl.obolibrary.org/obo/CHEBI_73601
T377 8298-8310 Chemical denotes carbohydrate http://purl.obolibrary.org/obo/CHEBI_16646
T378 8335-8337 Chemical denotes WD http://purl.obolibrary.org/obo/CHEBI_74868
T379 8350-8364 Chemical denotes polysaccharide http://purl.obolibrary.org/obo/CHEBI_18154
T380 8382-8384 Chemical denotes KD http://purl.obolibrary.org/obo/CHEBI_73601
T381 8426-8431 Chemical denotes lipid http://purl.obolibrary.org/obo/CHEBI_18059
T382 8476-8478 Chemical denotes WD http://purl.obolibrary.org/obo/CHEBI_74868
T383 8479-8481 Chemical denotes KD http://purl.obolibrary.org/obo/CHEBI_73601
T384 8492-8499 Chemical denotes glucose http://purl.obolibrary.org/obo/CHEBI_17234|http://purl.obolibrary.org/obo/CHEBI_4167
T386 8634-8641 Chemical denotes insulin http://purl.obolibrary.org/obo/CHEBI_145810
T387 8708-8712 Chemical denotes male http://purl.obolibrary.org/obo/CHEBI_30780
T388 8779-8786 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T389 8796-8809 Chemical denotes carbohydrates http://purl.obolibrary.org/obo/CHEBI_16646
T390 8835-8842 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T391 8851-8864 Chemical denotes carbohydrates http://purl.obolibrary.org/obo/CHEBI_16646
T392 8881-8883 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T394 8930-8937 Chemical denotes ketones http://purl.obolibrary.org/obo/CHEBI_17087
T395 9090-9095 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433
T396 9135-9145 Chemical denotes butanediol http://purl.obolibrary.org/obo/CHEBI_52684
T397 9146-9152 Chemical denotes ketone http://purl.obolibrary.org/obo/CHEBI_17087
T398 9153-9161 Chemical denotes diesters http://purl.obolibrary.org/obo/CHEBI_51307
T399 9168-9173 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433
T400 9177-9179 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T402 9247-9254 Chemical denotes sucrose http://purl.obolibrary.org/obo/CHEBI_17992
T403 9288-9290 Chemical denotes WT http://purl.obolibrary.org/obo/CHEBI_141450
T404 9292-9296 Chemical denotes male http://purl.obolibrary.org/obo/CHEBI_30780

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T108 178-194 http://purl.obolibrary.org/obo/GO_0006629 denotes lipid metabolism
T109 184-194 http://purl.obolibrary.org/obo/GO_0008152 denotes metabolism
T110 690-702 http://purl.obolibrary.org/obo/GO_0006954 denotes inflammation
T111 2907-2914 http://purl.obolibrary.org/obo/GO_0005152 denotes IL-1 Ra
T112 4587-4593 http://purl.obolibrary.org/obo/GO_0005152 denotes IL-1ra
T113 7131-7143 http://purl.obolibrary.org/obo/GO_0006954 denotes inflammation

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T104 0-323 Sentence denotes However, a long-term carbohydrate-restricted, high-fat diet promoted a pro-inflammatory state (He et al., 2018), impairing glucose (Ellenbroek et al., 2014; He et al., 2018) and lipid metabolism (Garbow et al., 2011), affecting liver (Garbow et al., 2011) and pancreatic function (Ellenbroek et al., 2014; He et al., 2018).
T105 324-611 Sentence denotes A high intake of saturated fats also led to an increase in pro-inflammatory molecules’ levels (IL-1β or leptin) (Andre et al., 2017), although a short-term diet enrichment with ketone diesters induced anti-inflammatory effects in NLRP3-mediated inflammatory maladies (Youm et al., 2015).
T106 612-867 Sentence denotes Post-spinal cord injury, a ketogenic diet reduced oxidative stress as well as inflammation, suppressing the NF-κB pathway (Andre et al., 2017; Lu et al., 2018), while activating Nrf2, resulting in lowering TNF-α, IL-1β, IFN-γ expression (Lu et al., 2018).
T107 868-935 Sentence denotes The highlights of these studies are presented in Table 1, Table 2 .
T108 936-1063 Sentence denotes Table 1 Clinical studies regarding the effect of high fibre intake on inflammatory markers in obesity and associated pathology.
T109 1064-1120 Sentence denotes Design Population Dietary intervention Outcome Reference
T110 1121-1432 Sentence denotes Randomized cross-over trial 50 Danish subjects with high risk of metabolic syndrome two 8-week periods of whole grain intake (179 ± 50 g/day)/refined grain (maximum 13 ± 10 g/day of whole grain), divided by a washout period of ≥6 weeks. ↓ body weight, serum inflammatory markers (IL-6, CRP) Roager et al. (2019)
T111 1433-1716 Sentence denotes Double-blind, crossover, placebo-controlled, randomized study 45 metabolic syndrome patients risk factors galactooligosaccharide mixture intervention to increase dietary fibre content, with a 4-wk wash-out period between interventions ↓ faecal calprotectin, CRP Vulevic et al. (2013)
T112 1717-2014 Sentence denotes Randomized controlled trial 143 individuals with metabolic syndrome 12 weeks of rye and whole wheat was compared with a diet containing the equivalent amount of refined cereal foods no significant effects on the expression of inflammatory markers' genes or insulin sensitivity Giacco et al. (2013)
T113 2015-2229 Sentence denotes Randomized crossover study 19 adults with metabolic syndrome 4-week of arabinoxylan and resistant starch enriched diet versus Western-style, low-fibre diet ↓ faecal calprotectin, IL-23A and NF-κB Hald et al. (2016)
T114 2230-2432 Sentence denotes Crossover intervention study 25 hypercholesterolemic subjects 5-week intervention using low fibre and high fibre diet, separated by a 3-week washout. ↓ CRP and fibrinogen Johansson-Persson et al. (2014)
T115 2433-2656 Sentence denotes Randomized controlled trial 68 overweight with prediabetes 12 weeks of 45 g/d of high-amylose maize (RS2) versus an isocaloric amount of amylopectin (control) ↓ TNF-α, no change in insulin sensitivity Peterson et al. (2018)
T116 2657-2965 Sentence denotes Randomized controlled trial 166 subjects with features of metabolic syndrome 4-week using healthy diet (fruits and vegetables, berries, whole-grain products, rapeseed oil, three fish meals per week) compared to an regular Nordic diet Control diet: ↑ IL-1 Ra (versus healthy diet group) Uusitupa et al. (2013)
T117 2966-3342 Sentence denotes Crossover study 10 healthy subjects Subjects received either 910calorie high- carbohydrate/high-fat meal or a standard meal according to American Heart Association (based on fruit and fibre) during the first visit and the other meal during the second visit ↑ oxidative stress (bloodlevels of TBARS, LPS, FFA) and proinflammatory markers (TNFα, and IL-1β) Dandona et al. (2015)
T118 3343-3511 Sentence denotes Randomized controlled trial 28 T2DM patients Subjects received brown rice (n = 14) or white rice (n = 14) diet for 8 weeks ↓ CRP in brown rice group Kondo et al. (2017)
T119 3512-3800 Sentence denotes Parallel design, dietary intervention trial 104 subjects with metabolic syndrome risk Subjects received Healthy Diet (n = 44), a whole-grain-enriched diet (n = 42) or a control (n = 45) diet, Healthy Diet group: ↓ E-selectinHealthy Diet and whole grain group: ↓ CRP de Mello et al. (2011)
T120 3801-4115 Sentence denotes Cross-over, randomized, placebo-controlled, double-blind, study 12 overweight and obese subjects Subjects received 20 g/day of inulin (high-fermentable fibre) and cellulose (low-fermentable fibre) for 42 days IPE: ↓ IL-8 levels (versus cellulose)Inulin: no effect on the inflammatory markers Chambers et al. (2019)
T121 4116-4371 Sentence denotes Crossover clinical study 18 subjects at low-to-moderate cardiometabolic risk Subjects received breakfast either rich in fibre, unsaturated fatty acids (unSFA) or saturated fatty acids (SFA) for 4 weeks SFA: ↑ IL-1β unSFA: ↓IL-6 Monfort-Pires et al. (2018)
T122 4372-4630 Sentence denotes Interventional diet study 21 overweight/obese children Subjects were placed on a regimen of low-fat, high-fibre diet and daily exercise for 2 weeks ↓ PAI-1, TNF-α, IL-6, IL-8, resistin, insulin, amylin, leptin, and IL-1ra↑ adiponectin Izadpanah et al. (2012)
T123 4631-4815 Sentence denotes Randomized, placebo-controlled study 31 hemodialysis patients Patients received either resistant starch or placebo supplementation, for 4 weeks ↓ IL-6 and TBARS Esgalhado et al. (2018)
T124 4816-5036 Sentence denotes Randomized controlled clinical trial 55 women with T2DM Subjects received 10 g resistant dextrin/day or a similar amount of maltodextrin for 8 weeks ↓ IL-6, TNF-α and MDA↑ Insulin sensitivity Aliasgharzadeh et al. (2015)
T125 5037-5277 Sentence denotes Randomized cross-over double-blind placebo-controlled trial 17 obese knee osteoarthritis patients Patients received freeze-dried strawberries or placebo for 2 periods of 12 weeks with 2 weeks of wash-out ↓ TNF-α and 4-HNE Basu et al. (2018)
T126 5278-5465 Sentence denotes Randomized study 59 T2DM patients Patients received metformin, acarbose and either a high fibre or a low fibre diet intervention for 8 weeks Low fibre group: ↓ IL-18 Nowotny et al. (2015)
T127 5466-5630 Sentence denotes Crossover study 33 healthy, middle-aged adults Patients received either high or low in in wholegrain intervention for 6-week periods, separated by a 4-week washout.
T128 5631-5704 Sentence denotes Whole grain: a slight decrease of IL-10 and CRP Ampatzoglou et al. (2016)
T129 5705-5927 Sentence denotes Observational study 8 subjects with impaired fasting glucose subjects received (1) high-fibre formula; (2) high-monounsaturated fatty acid formula or (3) control formula High fibre group: ↓ NF-κB in PBMCs Kim et al. (2013)
T130 5928-6119 Sentence denotes Randomized controlled clinical trial 60 females with T2DM Patients received 10 g/d resistant starch or placebo for 8 weeks, respectively ↓TNF-α, no effect on IL-6 or CRP Gargari et al. (2015)
T131 6120-6333 Sentence denotes Crossover clinical trial 80 overweight subjects Subjects received two isocaloric breakfast interventions -one rich in saturated fat and one in unsaturated fatty acids and fibres for 4 weeks with a 2-weeks washout.
T132 6334-6391 Sentence denotes Fibre group: ↓ IF-γ and TNF-α Monfort-Pires et al. (2018)
T133 6392-6551 Sentence denotes Observational study 49 T2DM females Patients received either 10 g/day inulin or maltodextrin/day for 8 weeks Inulin: ↓CRP, TNF-α and LPS Dehghan et al. (2014a)
T134 6552-6802 Sentence denotes Randomized controlled clinical trial 52 overweight/obese women with T2DM Patients received either 10 g/d of oligofructose-enriched inulin or maltodextrin (control) for 8 weeks oligofructose-enriched-Inulin: ↓ CRP, TNF-α and LPS Dehghan et al. (2014b)
T135 6803-7043 Sentence denotes Randomized crossover clinical trial 44 overweight/obese girls 8–15 years old Subjects received either whole-grain or control for 2 periods of 6 weeks with 4-week washout period Whole grain: ↓ CRP, ICAM-1 and leptin Hajihashemi et al. (2014)
T136 7044-7144 Sentence denotes Table 2 Preclinical reports regarding the relationship between carbohydrate intake and inflammation.
T137 7145-7195 Sentence denotes Diet Species Treatment Observed effects References
T138 7196-7308 Sentence denotes Carbohydrate-restricted diet Senescence-accelerated prone mice (SAMP8) 8-week treatment:➢ Control: standard chow
T139 7309-7336 Sentence denotes ➢ High fat diet group (HFD)
T140 7337-7450 Sentence denotes ➢ Carbohydrate-restricted diet group (CRD) CRD: ↑ IL-6 and IL-1β, ↓cecum short-chain fatty acids He et al. (2019)
T141 7451-7569 Sentence denotes Scandinavian low-carbohydrate high-fat (LCHF) diet Female C57BL/6J mice (n = 7/group) 4-week treatment:➢ standard chow
T142 7570-7732 Sentence denotes ➢ LCHF diet (75% fat 20% protein, and 5% carbohydrates) LCHF: no change in glycemia, TG, insulin, or non-esterified fatty acid plasma levels Nilsson et al. (2016)
T143 7733-7845 Sentence denotes Ketogenic diet Sprague-Dawley Rats with spinal cord injury (n = 18/group) 4-week treatment:➢ ketogenic diet (KD)
T144 7846-7866 Sentence denotes ➢ standard diet (SD)
T145 7867-7934 Sentence denotes ➢ control (C) KD: ↓ IL-1β, TNF-α, IFN-γ expression Lu et al. (2018)
T146 7935-8020 Sentence denotes Ketogenic diet Male C57BL/6J mice 22-weeks diet intervention:➢ Control: standard chow
T147 8021-8150 Sentence denotes ➢ Ketogenic diet group KD: ↑ triglycerides, cholesterol, leptin, MCP-1, IL-6, IL-1β,↓ α- and β-cell mass Ellenbroek et al. (2014)
T148 8151-8283 Sentence denotes Ketogenic versus Western diet C57BL/6J mice 12-week treatment:➢ very low-carbohydrate, low-protein, and high-fat ketogenic diet (KD)
T149 8284-8338 Sentence denotes ➢ high-simple-carbohydrate, high-fat Western diet (WD)
T150 8339-8677 Sentence denotes ➢ low-fat, polysaccharide-rich control (C) KD: euglycaemia and hypoinsulinemia + liver lipid accumulation (different pattern compared to WD)KD: systemic glucose intolerance, steatosis, cellular injury, endoplasmic reticulum stress (in liver), and macrophage accumulation, maintaining whole-body insulin responsiveness Garbow et al. (2011)
T151 8678-8759 Sentence denotes High-saturated fat diet (HFD) male C57BL/6J mice 3-week treatment:➢ standard chow
T152 8760-8810 Sentence denotes ➢ HFD (60% fat 20% protein, and 20% carbohydrates)
T153 8811-8906 Sentence denotes ➢ Very HFD (80% fat 16% protein, and 4% carbohydrates) HFD: ↑ leptin, IL-1β Andre et al. (2017)
T154 8907-9081 Sentence denotes Diet supplemented with ketones Knockout mice model for Muckle-Wells Syndrome and Familial Cold Autoinflammatory syndrome 1-week treatment:➢ Control: normal chow with 4.5% fat
T155 9082-9232 Sentence denotes ➢ Study group: normal chow supplemented with 20% 1,3-butanediol ketone diesters Study group: ↓ IL-1β release and caspase-1 activity Youm et al. (2015)
T156 9233-9346 Sentence denotes High fat high sucrose diet (HFD) C57BL/6 J (wild type; WT) male mice 8-week treatment:➢ Young + normal diet (YND)
T157 9347-9367 Sentence denotes ➢ Young + HFD (YHFD)
T158 9368-9393 Sentence denotes ➢ Old + normal diet (OND)
T159 9394-9586 Sentence denotes ➢ Old + HFD (OHFD) HFD led to β-cell failure in aged mice, enhanced expression of pro-inflammatory cytokines and macrophage transformation to a more pro-inflammatory phenotype He et al. (2018)

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T54 662-678 Phenotype denotes oxidative stress http://purl.obolibrary.org/obo/HP_0025464
T55 1030-1037 Phenotype denotes obesity http://purl.obolibrary.org/obo/HP_0001513
T56 2464-2474 Phenotype denotes overweight http://purl.obolibrary.org/obo/HP_0025502
T57 3225-3241 Phenotype denotes oxidative stress http://purl.obolibrary.org/obo/HP_0025464
T58 3868-3878 Phenotype denotes overweight http://purl.obolibrary.org/obo/HP_0025502
T59 4401-4411 Phenotype denotes overweight http://purl.obolibrary.org/obo/HP_0025502
T60 5106-5125 Phenotype denotes knee osteoarthritis http://purl.obolibrary.org/obo/HP_0005086
T61 6148-6158 Phenotype denotes overweight http://purl.obolibrary.org/obo/HP_0025502
T62 6592-6602 Phenotype denotes overweight http://purl.obolibrary.org/obo/HP_0025502
T63 6842-6852 Phenotype denotes overweight http://purl.obolibrary.org/obo/HP_0025502
T64 8402-8417 Phenotype denotes hypoinsulinemia http://purl.obolibrary.org/obo/HP_0040216
T65 8492-8511 Phenotype denotes glucose intolerance http://purl.obolibrary.org/obo/HP_0001952
T66 8513-8522 Phenotype denotes steatosis http://purl.obolibrary.org/obo/HP_0001397

MyTest

Id Subject Object Predicate Lexical cue
32640331-29426925-30720786 106-110 29426925 denotes 2018
32640331-24398402-30720787 151-155 24398402 denotes 2014
32640331-29426925-30720788 168-172 29426925 denotes 2018
32640331-21454445-30720789 211-215 21454445 denotes 2011
32640331-21454445-30720790 250-254 21454445 denotes 2011
32640331-24398402-30720791 300-304 24398402 denotes 2014
32640331-29426925-30720792 317-321 29426925 denotes 2018
32640331-27903745-30720793 451-455 27903745 denotes 2017
32640331-25686106-30720794 605-609 25686106 denotes 2015
32640331-27903745-30720795 749-753 27903745 denotes 2017
32640331-29894768-30720796 766-770 29894768 denotes 2018
32640331-29894768-30720797 861-865 29894768 denotes 2018
32640331-29097438-30720798 1427-1431 29097438 denotes 2019
32640331-23303873-30720799 1711-1715 23303873 denotes 2013
32640331-23462537-30720800 2009-2013 23462537 denotes 2013
32640331-23389112-30720801 2427-2431 23389112 denotes 2014
32640331-30010698-30720802 2651-2655 30010698 denotes 2018
32640331-23398528-30720803 2960-2964 23398528 denotes 2013
32640331-25406260-30720804 3337-3341 25406260 denotes 2015
32640331-21870174-30720805 3795-3799 21870174 denotes 2011
32640331-30971437-30720806 4110-4114 30971437 denotes 2019
32640331-29098425-30720807 4366-4370 29098425 denotes 2018
32640331-22713506-30720808 4625-4629 22713506 denotes 2012
32640331-30468238-30720809 4810-4814 30468238 denotes 2018
32640331-27028002-30720810 5031-5035 27028002 denotes 2015
32640331-30382270-30720811 5272-5276 30382270 denotes 2018
32640331-25425219-30720812 5460-5464 25425219 denotes 2015
32640331-25618418-30720813 5699-5703 25618418 denotes 2016
32640331-24283276-30720814 5922-5926 24283276 denotes 2013
32640331-29098425-30720815 6386-6390 29098425 denotes 2018
32640331-24478050-30720818 7038-7042 24478050 denotes 2014
32640331-31952014-30720819 7445-7449 31952014 denotes 2019
32640331-27891164-30720820 7727-7731 27891164 denotes 2016
32640331-29894768-30720821 7929-7933 29894768 denotes 2018
32640331-24398402-30720822 8145-8149 24398402 denotes 2014
32640331-21454445-30720823 8672-8676 21454445 denotes 2011
32640331-27903745-30720824 8901-8905 27903745 denotes 2017
32640331-25686106-30720825 9227-9231 25686106 denotes 2015
32640331-29426925-30720826 9581-9585 29426925 denotes 2018

2_test

Id Subject Object Predicate Lexical cue
32640331-29426925-30720786 106-110 29426925 denotes 2018
32640331-24398402-30720787 151-155 24398402 denotes 2014
32640331-29426925-30720788 168-172 29426925 denotes 2018
32640331-21454445-30720789 211-215 21454445 denotes 2011
32640331-21454445-30720790 250-254 21454445 denotes 2011
32640331-24398402-30720791 300-304 24398402 denotes 2014
32640331-29426925-30720792 317-321 29426925 denotes 2018
32640331-27903745-30720793 451-455 27903745 denotes 2017
32640331-25686106-30720794 605-609 25686106 denotes 2015
32640331-27903745-30720795 749-753 27903745 denotes 2017
32640331-29894768-30720796 766-770 29894768 denotes 2018
32640331-29894768-30720797 861-865 29894768 denotes 2018
32640331-29097438-30720798 1427-1431 29097438 denotes 2019
32640331-23303873-30720799 1711-1715 23303873 denotes 2013
32640331-23462537-30720800 2009-2013 23462537 denotes 2013
32640331-23389112-30720801 2427-2431 23389112 denotes 2014
32640331-30010698-30720802 2651-2655 30010698 denotes 2018
32640331-23398528-30720803 2960-2964 23398528 denotes 2013
32640331-25406260-30720804 3337-3341 25406260 denotes 2015
32640331-21870174-30720805 3795-3799 21870174 denotes 2011
32640331-30971437-30720806 4110-4114 30971437 denotes 2019
32640331-29098425-30720807 4366-4370 29098425 denotes 2018
32640331-22713506-30720808 4625-4629 22713506 denotes 2012
32640331-30468238-30720809 4810-4814 30468238 denotes 2018
32640331-27028002-30720810 5031-5035 27028002 denotes 2015
32640331-30382270-30720811 5272-5276 30382270 denotes 2018
32640331-25425219-30720812 5460-5464 25425219 denotes 2015
32640331-25618418-30720813 5699-5703 25618418 denotes 2016
32640331-24283276-30720814 5922-5926 24283276 denotes 2013
32640331-29098425-30720815 6386-6390 29098425 denotes 2018
32640331-24478050-30720818 7038-7042 24478050 denotes 2014
32640331-31952014-30720819 7445-7449 31952014 denotes 2019
32640331-27891164-30720820 7727-7731 27891164 denotes 2016
32640331-29894768-30720821 7929-7933 29894768 denotes 2018
32640331-24398402-30720822 8145-8149 24398402 denotes 2014
32640331-21454445-30720823 8672-8676 21454445 denotes 2011
32640331-27903745-30720824 8901-8905 27903745 denotes 2017
32640331-25686106-30720825 9227-9231 25686106 denotes 2015
32640331-29426925-30720826 9581-9585 29426925 denotes 2018

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T448 21-33 CHEBI:16646;CHEBI:16646 denotes carbohydrate
T449 123-130 CHEBI:17234;CHEBI:17234;GO:0006006 denotes glucose
T450 178-183 CHEBI:18059;CHEBI:18059;GO:0006629 denotes lipid
T451 184-194 GO:0006629 denotes metabolism
T452 228-233 UBERON:0002107 denotes liver
T453 260-270 UBERON:0001264 denotes pancreatic
T454 331-337 GO:0007631 denotes intake
T455 386-399 CHEBI:35472;CHEBI:35472 denotes -inflammatory
T456 400-409 CHEBI:36357;CHEBI:36357 denotes molecules
T457 419-424 PR:000001136 denotes IL-1β
T458 501-507 CHEBI:17087;CHEBI:17087 denotes ketone
T459 508-516 CHEBI:51307;CHEBI:51307 denotes diesters
T460 554-559 PR:000011271 denotes NLRP3
T461 617-628 UBERON:0002240 denotes spinal cord
T462 639-648 CHEBI:25754;CHEBI:25754;GO:0031424 denotes ketogenic
T463 662-671 MOP:0000568 denotes oxidative
T464 720-722 GO:0005883 denotes NF
T465 790-794 PR:000011170 denotes Nrf2
T466 818-823 PR:000000134 denotes TNF-α
T467 825-830 PR:000001136 denotes IL-1β
T468 832-837 PR:000000017 denotes IFN-γ
T469 838-848 GO:0010467 denotes expression
T607 996-1002 GO:0007631 denotes intake
T797 1067-1068 UBERON:0001913 denotes i
T807 1103-1104 GO:0008152 denotes O
T810 1114-1115 CHEBI:36357;CHEBI:36357 denotes e
T816 1137-1139 CHEBI:67079;CHEBI:67079 denotes -o
T818 1146-1147 GO:0007259 denotes a
T837 1149-1151 PR:Q43731 denotes 50
T840 1153-1154 PR:000002089 denotes a
T859 1161-1162 GO:0008152 denotes b
T874 1164-1165 PR:000013428 denotes c
T876 1165-1166 PR:000000134 denotes t
T889 1178-1181 UBERON:0004535 denotes ris
T890 1186-1187 UBERON:0001977 denotes m
T895 1201-1202 GO:0010467 denotes o
T902 1216-1218 GO:0010467 denotes pe
T907 1219-1220 PR:000001776 denotes i
T908 1225-1227 CHEBI:26607;CHEBI:26607 denotes f
T909 1229-1230 CHEBI:16646;CHEBI:16646 denotes o
T910 1231-1232 GO:0010467 denotes e
T911 1233-1234 SO:0000704 denotes g
T918 1247-1248 PR:000001136 denotes 1
T994 1278-1279 CHEBI:50488;CHEBI:50488 denotes m
T996 1279-1280 CHEBI:28661;CHEBI:28661 denotes a
T1199 1291-1293 PR:000001417 denotes 10
T1202 1294-1295 CL:0000235 denotes g
T1234 1301-1302 GO:0005883;GO:0051092 denotes f
T1235 1302-1303 GO:0051092 denotes
T1247 1328-1329 UBERON:0000010 denotes a
T1257 1332-1333 CHEBI:28757;CHEBI:28757 denotes s
T1264 1340-1341 UBERON:0002107 denotes r
T1267 1345-1346 GO:0065007 denotes o
T1342 1355-1356 GO:0010467 denotes s
T1348 1361-1362 NCBITaxon:10088 denotes o
T1355 1366-1367 NCBITaxon:10088 denotes e
T1356 1367-1368 PR:000001092 denotes i
T1372 1369-1370 SP_6;NCBITaxon:9606 denotes h
T1382 1374-1376 GO:0010467 denotes er
T1396 1393-1394 CHEBI:16856;CHEBI:16856 denotes a
T1405 1398-1399 GO:0005777 denotes s
T1461 1414-1415 CHEBI:30751;CHEBI:30751 denotes a
T2012 1687-1690 GO:0007631 denotes in,
T2013 1695-1705 CHEBI:5086;CHEBI:5086 denotes Vulevic et
T2014 1706-1709 CHEBI:35218;CHEBI:35218 denotes al.
T2015 1721-1726 CHEBI:24043;CHEBI:24043 denotes omize
T2016 1728-1732 GO:0007631 denotes cont
T2017 1773-1779 PR:000009054 denotes ic syn
T2018 1794-1804 CHEBI:35218;CHEBI:35218 denotes of rye and
T2019 1805-1810 GO:0007631 denotes whole
T2021 1882-1884 GO:0007631 denotes ne
T2023 2057-2066 GO:0008152 denotes metabolic
T2024 2180-2192 PR:000001393 denotes calprotectin
T2025 2262-2284 CHEBI:26195;CHEBI:26195 denotes hypercholesterolemic s
T2026 2450-2454 UBERON:0000178 denotes lled
T2027 2533-2545 PR:000009054 denotes (RS2) versus
T2028 2549-2559 PR:000009054 denotes isocaloric
T2029 2622-2623 UBERON:0001969 denotes s
T2031 3071-3073 CHEBI:36357;CHEBI:36357 denotes or
T2032 3100-3111 UBERON:0004535 denotes to American
T2033 3289-3291 UBERON:0007023 denotes at
T2034 3429-3434 CHEBI:16113;CHEBI:16113 denotes white
T2035 3435-3439 CHEBI:17855;CHEBI:17855 denotes rice
T2036 3443-3453 CHEBI:12071;CHEBI:12071 denotes = 14) diet
T2037 3624-3633 CHEBI:21241;CHEBI:21241 denotes Diet (n =
T2038 3641-3652 CHEBI:26195;CHEBI:26195 denotes whole-grain
T2039 3659-3661 CHEBI:33290;CHEBI:33290 denotes ed
T2040 3694-3716 GO:0008152 denotes 45) diet, Healthy Diet
T2041 3749-3764 CHEBI:39015;CHEBI:39015 denotes and whole grain
T2043 3779-3780 PR:000001415 denotes e
T2044 3845-3860 CHEBI:26195;CHEBI:26195 denotes double-blind, s
T2045 3944-3952 GO:0008152 denotes mentable
T2046 4286-4299 MOP:0000568 denotes d fatty acids
T2047 4339-4343 PR:000001393 denotes IL-6
T2048 4684-4689 PR:000004155 denotes patie
T2049 4711-4726 CHEBI:16243;CHEBI:16243 denotes either resistan
T2050 4809-4817 CHEBI:16243;CHEBI:16243 denotes (2018) R
T2051 4917-4918 UBERON:0000178 denotes o
T2052 5370-5376 UBERON:0000178 denotes bre or
T2053 5591-5598 CHEBI:16412;CHEBI:16412 denotes periods
T2054 5665-5667 PR:000001395 denotes IL
T2055 5667-5670 PR:000001395;GO:1990774 denotes -10
T2058 5952-5992 PR:000009054 denotes inical trial 60 females with T2DM Patien
T2059 6083-6136 GO:0008152 denotes on IL-6 or CRP Gargari et al. (2015) Crossover clinic
T2060 6378-6427 SO:0000704 denotes et al. (2018) Observational study 49 T2DM females
T2061 6462-6468 PR:000009054 denotes inulin
T2062 6716-6741 CHEBI:47916;CHEBI:47916 denotes for 8 weeks oligofructose
T2063 7133-7146 CHEBI:47916;CHEBI:47916 denotes flammation. D
T2064 7154-7165 GO:0007631 denotes ies Treatme
T2065 7422-7476 CHEBI:33290;CHEBI:33290 denotes fatty acids He et al. (2019) Scandinavian low-carbohyd
T2066 7642-7666 PR:000009054 denotes in glycemia, TG, insulin
T2067 7998-8084 CHEBI:35218;CHEBI:35218 denotes Control: standard chow ➢ Ketogenic diet group KD: ↑ triglycerides, cholesterol, leptin
T2068 8114-8135 CHEBI:24043;CHEBI:24043 denotes β-cell mass Ellenbroe
T2069 8137-8153 GO:0007631 denotes et al. (2014) Ke
T2070 8500-8535 PR:000009054 denotes intolerance, steatosis, cellular in
T2071 9047-9091 GO:0007631 denotes Control: normal chow with 4.5% fat ➢ Study g
T2072 9138-9152 CHEBI:35218;CHEBI:35218 denotes anediol ketone
T2074 9462-9468 CHEBI:16412;CHEBI:16412 denotes expres