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LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T542 16-27 NCBITaxon:11118 denotes Coronavirus
T543 155-159 UBERON:0002048 denotes lung
T544 237-244 UBERON:0000479 denotes tissues
T545 259-263 SP_10 denotes SARS
T546 268-272 SP_9 denotes MERS
T547 299-304 UBERON:0000170 denotes lungs
T548 334-354 UBERON:0002031 denotes bronchial epithelial
T549 375-380 GO:0005929 denotes cilia
T550 403-413 CL:0000322 denotes pneumocyte
T551 431-440 UBERON:0002031 denotes bronchial
T552 441-457 UBERON:0011148 denotes submucosal gland
T553 515-523 UBERON:0003215 denotes alveolar
T554 624-629 UBERON:0000170 denotes lungs
T555 643-649 UBERON:0000479 denotes tissue
T556 829-837 SP_10 denotes SARS-CoV
T557 844-852 SP_9 denotes MERS-CoV
T558 853-862 GO:0006260 denotes replicate
T559 1077-1086 UBERON:0002048 denotes pulmonary
T560 1087-1098 GO:0006260 denotes replication
T561 1102-1110 SP_10 denotes SARS-CoV
T562 1197-1209 UBERON:0005169 denotes interstitial
T563 1231-1239 UBERON:0003215 denotes alveolar
T564 1304-1312 GO:0051716 denotes cellular
T565 1313-1319 UBERON:0002405;GO:0006955 denotes immune
T566 1320-1328 GO:0006955 denotes response
T567 1349-1354 PR:000000134 denotes TNF-α
T568 1359-1363 PR:000001393 denotes IL-6
T569 1381-1397 PR:000000017 denotes interferon gamma
T570 1423-1431 CL:0000576 denotes monocyte
T571 1457-1460 PR:000001401 denotes MCP
T572 1465-1475 CL:0000235 denotes macrophage
T573 1498-1501 PR:000010911 denotes MIP
T574 1507-1513 PR:000002094 denotes RANTES
T575 1555-1561 UBERON:0001005;CL:0002368 denotes airway
T576 1562-1572 CL:0002368;UBERON:0000483 denotes epithelial
T577 1573-1578 CL:0002368 denotes cells
T578 1580-1588 UBERON:0003215;CL:0000583 denotes alveolar
T579 1589-1600 CL:0000583 denotes macrophages
T580 1616-1637 CL:0000860 denotes inflammatory monocyte
T581 1638-1649 CL:0000235 denotes macrophages
T582 1654-1665 CL:0000775 denotes neutrophils
T583 1709-1717 UBERON:0003215;CL:0000583 denotes alveolar
T584 1718-1729 CL:0000583 denotes macrophages
T585 1741-1749 SP_10 denotes SARS-CoV
T586 1756-1764 SP_9 denotes MERS-CoV
T587 1882-1888 GO:0045087 denotes innate
T588 1889-1895 GO:0045087;UBERON:0002405 denotes immune
T589 1896-1904 GO:0045087 denotes response
T590 1931-1943 CL:0002629 denotes inflammatory
T591 1944-1952 CL:0000860 denotes monocyte
T592 1953-1963 CL:0000235 denotes macrophage
T593 1983-1991 SP_7 denotes COVID-19
T594 2033-2037 UBERON:0002048 denotes lung
T595 2054-2065 CL:0000235 denotes macrophages
T596 2101-2123 UBERON:0002031;BV_4 denotes bronchoalveolar lavage
T597 2124-2129 BV_4;UBERON:0006314 denotes fluid
T598 2182-2190 UBERON:0003215;CL:0000583 denotes alveolar
T599 2191-2202 CL:0000583 denotes macrophages
T600 2204-2214 CHEBI:35366;CHEBI:35366;PR:000025846 denotes Fatty Acid
T601 2215-2230 PR:000025846 denotes Binding Protein
T602 2329-2333 PR:000007437 denotes FCN1
T603 2337-2345 CL:0000576 denotes monocyte
T604 2354-2365 CL:0000235 denotes macrophages
T605 2380-2388 SP_10 denotes SARS-CoV
T606 2520-2531 CL:0000235 denotes macrophages
T607 2533-2536 PR:000001004 denotes CD4
T608 2538-2545 CL:0000084 denotes T cells
T609 2567-2572 UBERON:0000170 denotes lungs
T610 2591-2613 CHEBI:67079;CHEBI:67079 denotes inflammatory mediators
T611 2668-2673 PR:000000134 denotes TNF-α
T612 2675-2679 PR:000001393 denotes IL-6
T613 2681-2686 PR:000000017 denotes IFN-γ
T614 2690-2692 PR:000001379 denotes -2
T615 2694-2698 PR:000001392 denotes IL-5
T616 2715-2720 PR:000002122 denotes MCP-1
T617 2722-2728 PR:000002123 denotes MIP-1a
T618 2809-2813 UBERON:0002048 denotes lung
T619 2830-2837 CL:0000084 denotes T cells
T620 2842-2853 CL:0000775 denotes neutrophils
T621 2998-3003 UBERON:0000178 denotes blood
T622 3008-3013 UBERON:0000170 denotes lungs
T623 3017-3021 SP_10 denotes SARS
T624 3067-3071 SP_10 denotes SARS
T625 3076-3080 SP_9 denotes MERS
T626 3090-3095 UBERON:0000170 denotes lungs
T627 3222-3233 GO:0006953 denotes acute phase
T628 3237-3241 SP_10 denotes SARS
T629 3304-3309 PR:000000017 denotes IFN-γ
T630 3350-3354 UBERON:0001977 denotes sera
T631 3413-3429 CHEBI:50846;CHEBI:50846 denotes immunomodulators
T632 3474-3479 PR:000000017 denotes IFN-γ
T633 3481-3486 PR:000001376 denotes IL-18
T634 3488-3493 PR:000006064 denotes IP-10
T635 3495-3500 PR:000002122 denotes MCP-1
T636 3511-3515 PR:000001395 denotes IL-8
T637 3570-3574 UBERON:0001977 denotes sera
T638 3576-3581 PR:000006064 denotes IP-10
T639 3588-3593 PR:000002122 denotes MCP-1
T640 3599-3604 PR:000001376 denotes IL-18
T641 3648-3653 GO:0016265 denotes death
T642 3733-3738 PR:000000017 denotes IFN-γ
T643 3750-3760 CL:0000542 denotes lymphocyte
T644 3811-3816 PR:000000017 denotes IFN-γ
T645 3825-3835 CL:0000542 denotes lymphocyte
T646 3836-3845 GO:0006915 denotes apoptosis
T647 3849-3862 GO:0051235 denotes sequestration
T648 3886-3897 CL:0000542 denotes lymphocytes
T649 3905-3910 UBERON:0000170 denotes lungs
T650 3983-3987 SP_10 denotes SARS
T651 4090-4095 PR:000001136 denotes IL-1b
T652 4097-4103 PR:000001137 denotes IL-1Ra
T653 4105-4109 PR:000001393 denotes IL-6
T654 4111-4115 PR:000001395 denotes IL-8
T655 4117-4122 PR:000001376 denotes IL-18
T656 4128-4133 PR:000000134 denotes TNF-α
T657 4171-4179 SP_7 denotes COVID-19
T658 4397-4405 SP_7 denotes COVID-19
T659 4438-4443 NCBITaxon:10239 denotes viral
T660 4476-4482 UBERON:0002405;GO:0006955 denotes immune
T661 4483-4491 GO:0006955 denotes response
T662 4633-4654 CL:0000860 denotes inflammatory monocyte
T663 4655-4666 CL:0000235 denotes macrophages
T664 4671-4682 CL:0000775 denotes neutrophils
T665 4701-4706 UBERON:0000170 denotes lungs
T666 4775-4787 GO:0001764 denotes migration of
T667 4788-4799 GO:0001764;CL:0000542 denotes lymphocytes
T668 4828-4833 UBERON:0000170 denotes lungs
T669 4884-4889 PR:000000017 denotes IFN-γ
T670 4922-4927 SP_6;NCBITaxon:9606 denotes human
T671 4928-4932 UBERON:0002048 denotes lung
T672 5009-5018 UBERON:0002048 denotes pulmonary
T673 5019-5026 UBERON:0000479 denotes tissues
T674 5085-5096 UBERON:0001004 denotes respiratory
T675 5336-5344 SP_7 denotes COVID-19
T676 5426-5433 CL:0000623 denotes NK cell
T677 5468-5473 PR:000000017 denotes IFN-γ
T678 5483-5493 CL:0000066;UBERON:0000483 denotes epithelial
T679 5498-5509 UBERON:0001986;CL:0000115 denotes endothelial
T680 5510-5514 CL:0000115;GO:0006915 denotes cell
T681 5515-5524 GO:0006915 denotes apoptosis
T682 5558-5564 CL:0000084;GO:0042110 denotes T cell
T683 5605-5626 CL:0000890 denotes activated macrophages
T684 5639-5645 UBERON:0000479 denotes tissue
T685 5646-5657 GO:0001894 denotes homeostasis
T686 5705-5713 SP_7 denotes COVID-19
T687 5974-5978 UBERON:0002048 denotes lung
T688 6050-6061 NCBITaxon:11118 denotes coronavirus
T689 6088-6102 CL:0000623 denotes Natural Killer
T690 6126-6137 NCBITaxon:1 denotes individuals
T691 6148-6158 SP_7 denotes SARS-CoV-2
T692 6193-6198 NCBITaxon:10239 denotes viral
T693 6215-6225 GO:0009986 denotes surface of
T694 6383-6392 GO:0006915 denotes apoptosis
T695 6401-6406 GO:0016265 denotes death
T696 6426-6434 GO:0042571 denotes antibody
T697 6496-6516 GO:0051904 denotes release of cytotoxic
T698 6517-6525 GO:0051904;GO:0009542 denotes granules
T699 6563-6570 NCBITaxon:10239 denotes virally
T700 6590-6603 GO:0030510 denotes modulation of
T701 6608-6614 UBERON:0002405 denotes immune
T702 6665-6671 GO:0045087 denotes innate
T703 6672-6678 GO:0045087;UBERON:0002405 denotes immune
T704 6679-6687 GO:0045087 denotes response
T705 6709-6719 SP_7 denotes SARS-CoV-2
T706 6754-6759 UBERON:0000170 denotes lungs
T707 6785-6796 NCBITaxon:1 denotes individuals
T708 6868-6878 SP_7 denotes SARS-CoV-2
T709 6896-6902 UBERON:0002405 denotes immune
T710 6938-6943 NCBITaxon:10239 denotes virus
T711 6997-7007 UBERON:0000483;CL:0000066 denotes epithelial
T712 7008-7013 CL:0000066 denotes cells
T713 7025-7031 UBERON:0002405;CL:0000738 denotes immune
T714 7032-7037 CL:0000738 denotes cells
T715 7039-7047 CL:0000576 denotes monocyte
T716 7048-7059 CL:0000235 denotes macrophages
T717 7064-7075 CL:0000775 denotes neutrophils
T718 7133-7139 UBERON:0002405 denotes immune
T719 7174-7179 UBERON:0000170 denotes lungs
T720 7242-7247 PR:000000017 denotes IFN-γ
T721 7328-7332 UBERON:0002048 denotes lung
T722 7356-7367 UBERON:0001004 denotes respiratory
T723 7467-7475 SP_7 denotes COVID-19
T724 7477-7487 SP_7 denotes SARS-CoV-2
T725 7584-7589 NCBITaxon:10239 denotes viral
T726 7623-7627 UBERON:0002048 denotes lung
T727 7775-7777 GO:0006741 denotes NK
T728 7778-7794 GO:0007219 denotes cell stimulation
T729 7799-7804 PR:000000017;GO:1990774 denotes IFN-γ
T730 7805-7815 GO:1990774 denotes production
T731 7876-7890 GO:0001775 denotes stimulation of
T732 8546-8551 NCBITaxon:10239 denotes viral
T733 8626-8633 CL:0000623 denotes NK cell
T734 8634-8642 CHEBI:35224;CHEBI:35224 denotes effector
T735 8724-8728 UBERON:0002048 denotes lung
T736 8766-8772 NCBITaxon:9606 denotes humans
T737 8933-8939 UBERON:0002405;GO:0006955 denotes immune
T738 8940-8948 GO:0006955 denotes response
T739 8952-8965 NCBITaxon:11118 denotes coronaviruses
T740 9063-9071 SP_7 denotes COVID-19
T48278 16-27 NCBITaxon:11118 denotes Coronavirus
T60333 155-159 UBERON:0002048 denotes lung
T53803 237-244 UBERON:0000479 denotes tissues
T23951 259-263 SP_10 denotes SARS
T6509 268-272 SP_9 denotes MERS
T9283 299-304 UBERON:0000170 denotes lungs
T66762 334-354 UBERON:0002031 denotes bronchial epithelial
T3719 375-380 GO:0005929 denotes cilia
T91050 403-413 CL:0000322 denotes pneumocyte
T64333 431-440 UBERON:0002031 denotes bronchial
T52673 441-457 UBERON:0011148 denotes submucosal gland
T57902 515-523 UBERON:0003215 denotes alveolar
T41661 624-629 UBERON:0000170 denotes lungs
T59152 643-649 UBERON:0000479 denotes tissue
T4501 829-837 SP_10 denotes SARS-CoV
T87796 844-852 SP_9 denotes MERS-CoV
T58320 853-862 GO:0006260 denotes replicate
T66223 1077-1086 UBERON:0002048 denotes pulmonary
T29179 1087-1098 GO:0006260 denotes replication
T22056 1102-1110 SP_10 denotes SARS-CoV
T42716 1197-1209 UBERON:0005169 denotes interstitial
T55066 1231-1239 UBERON:0003215 denotes alveolar
T32520 1304-1312 GO:0051716 denotes cellular
T11426 1313-1319 UBERON:0002405;GO:0006955 denotes immune
T34604 1320-1328 GO:0006955 denotes response
T51740 1349-1354 PR:000000134 denotes TNF-α
T41712 1359-1363 PR:000001393 denotes IL-6
T62062 1381-1397 PR:000000017 denotes interferon gamma
T60798 1423-1431 CL:0000576 denotes monocyte
T94024 1457-1460 PR:000001401 denotes MCP
T41267 1465-1475 CL:0000235 denotes macrophage
T51290 1498-1501 PR:000010911 denotes MIP
T50668 1507-1513 PR:000002094 denotes RANTES
T95249 1555-1561 UBERON:0001005;CL:0002368 denotes airway
T83477 1562-1572 CL:0002368;UBERON:0000483 denotes epithelial
T91732 1573-1578 CL:0002368 denotes cells
T44504 1580-1588 UBERON:0003215;CL:0000583 denotes alveolar
T37605 1589-1600 CL:0000583 denotes macrophages
T79350 1616-1637 CL:0000860 denotes inflammatory monocyte
T83306 1638-1649 CL:0000235 denotes macrophages
T54103 1654-1665 CL:0000775 denotes neutrophils
T64290 1709-1717 UBERON:0003215;CL:0000583 denotes alveolar
T37346 1718-1729 CL:0000583 denotes macrophages
T74570 1741-1749 SP_10 denotes SARS-CoV
T49916 1756-1764 SP_9 denotes MERS-CoV
T39759 1882-1888 GO:0045087 denotes innate
T87515 1889-1895 GO:0045087;UBERON:0002405 denotes immune
T36530 1896-1904 GO:0045087 denotes response
T62177 1931-1943 CL:0002629 denotes inflammatory
T49183 1944-1952 CL:0000860 denotes monocyte
T21024 1953-1963 CL:0000235 denotes macrophage
T17611 1983-1991 SP_7 denotes COVID-19
T98100 2033-2037 UBERON:0002048 denotes lung
T60120 2054-2065 CL:0000235 denotes macrophages
T91382 2101-2123 UBERON:0002031;BV_4 denotes bronchoalveolar lavage
T64394 2124-2129 BV_4;UBERON:0006314 denotes fluid
T98705 2182-2190 UBERON:0003215;CL:0000583 denotes alveolar
T58851 2191-2202 CL:0000583 denotes macrophages
T91532 2204-2214 CHEBI:35366;CHEBI:35366;PR:000025846 denotes Fatty Acid
T51519 2215-2230 PR:000025846 denotes Binding Protein
T2059 2329-2333 PR:000007437 denotes FCN1
T33374 2337-2345 CL:0000576 denotes monocyte
T5993 2354-2365 CL:0000235 denotes macrophages
T47465 2380-2388 SP_10 denotes SARS-CoV
T30862 2520-2531 CL:0000235 denotes macrophages
T54699 2533-2536 PR:000001004 denotes CD4
T95449 2538-2545 CL:0000084 denotes T cells
T5501 2567-2572 UBERON:0000170 denotes lungs
T47301 2591-2613 CHEBI:67079;CHEBI:67079 denotes inflammatory mediators
T40619 2668-2673 PR:000000134 denotes TNF-α
T28152 2675-2679 PR:000001393 denotes IL-6
T72013 2681-2686 PR:000000017 denotes IFN-γ
T59156 2690-2692 PR:000001379 denotes -2
T78820 2694-2698 PR:000001392 denotes IL-5
T22959 2715-2720 PR:000002122 denotes MCP-1
T47903 2722-2728 PR:000002123 denotes MIP-1a
T67485 2809-2813 UBERON:0002048 denotes lung
T90979 2830-2837 CL:0000084 denotes T cells
T62246 2842-2853 CL:0000775 denotes neutrophils
T4870 2998-3003 UBERON:0000178 denotes blood
T37944 3008-3013 UBERON:0000170 denotes lungs
T27812 3017-3021 SP_10 denotes SARS
T76995 3067-3071 SP_10 denotes SARS
T45425 3076-3080 SP_9 denotes MERS
T97958 3090-3095 UBERON:0000170 denotes lungs
T79883 3222-3233 GO:0006953 denotes acute phase
T20220 3237-3241 SP_10 denotes SARS
T46038 3304-3309 PR:000000017 denotes IFN-γ
T56632 3350-3354 UBERON:0001977 denotes sera
T61409 3413-3429 CHEBI:50846;CHEBI:50846 denotes immunomodulators
T37778 3474-3479 PR:000000017 denotes IFN-γ
T20268 3481-3486 PR:000001376 denotes IL-18
T68694 3488-3493 PR:000006064 denotes IP-10
T63881 3495-3500 PR:000002122 denotes MCP-1
T3390 3511-3515 PR:000001395 denotes IL-8
T93910 3570-3574 UBERON:0001977 denotes sera
T1869 3576-3581 PR:000006064 denotes IP-10
T3480 3588-3593 PR:000002122 denotes MCP-1
T11556 3599-3604 PR:000001376 denotes IL-18
T85647 3648-3653 GO:0016265 denotes death
T37595 3733-3738 PR:000000017 denotes IFN-γ
T10229 3750-3760 CL:0000542 denotes lymphocyte
T7152 3811-3816 PR:000000017 denotes IFN-γ
T23594 3825-3835 CL:0000542 denotes lymphocyte
T33557 3836-3845 GO:0006915 denotes apoptosis
T56210 3849-3862 GO:0051235 denotes sequestration
T83064 3886-3897 CL:0000542 denotes lymphocytes
T73313 3905-3910 UBERON:0000170 denotes lungs
T66242 3983-3987 SP_10 denotes SARS
T66966 4090-4095 PR:000001136 denotes IL-1b
T63555 4097-4103 PR:000001137 denotes IL-1Ra
T81870 4105-4109 PR:000001393 denotes IL-6
T98664 4111-4115 PR:000001395 denotes IL-8
T42858 4117-4122 PR:000001376 denotes IL-18
T3126 4128-4133 PR:000000134 denotes TNF-α
T45626 4171-4179 SP_7 denotes COVID-19
T97801 4397-4405 SP_7 denotes COVID-19
T94338 4438-4443 NCBITaxon:10239 denotes viral
T84800 4476-4482 UBERON:0002405;GO:0006955 denotes immune
T10829 4483-4491 GO:0006955 denotes response
T8854 4633-4654 CL:0000860 denotes inflammatory monocyte
T85592 4655-4666 CL:0000235 denotes macrophages
T48602 4671-4682 CL:0000775 denotes neutrophils
T6108 4701-4706 UBERON:0000170 denotes lungs
T52676 4775-4787 GO:0001764 denotes migration of
T66009 4788-4799 GO:0001764;CL:0000542 denotes lymphocytes
T79571 4828-4833 UBERON:0000170 denotes lungs
T37894 4884-4889 PR:000000017 denotes IFN-γ
T39792 4922-4927 SP_6;NCBITaxon:9606 denotes human
T43562 4928-4932 UBERON:0002048 denotes lung
T77004 5009-5018 UBERON:0002048 denotes pulmonary
T89061 5019-5026 UBERON:0000479 denotes tissues
T9797 5085-5096 UBERON:0001004 denotes respiratory
T5750 5336-5344 SP_7 denotes COVID-19
T6647 5426-5433 CL:0000623 denotes NK cell
T43350 5468-5473 PR:000000017 denotes IFN-γ
T94178 5483-5493 CL:0000066;UBERON:0000483 denotes epithelial
T42421 5498-5509 UBERON:0001986;CL:0000115 denotes endothelial
T76513 5510-5514 CL:0000115;GO:0006915 denotes cell
T15168 5515-5524 GO:0006915 denotes apoptosis
T95563 5558-5564 CL:0000084;GO:0042110 denotes T cell
T73456 5605-5626 CL:0000890 denotes activated macrophages
T46045 5639-5645 UBERON:0000479 denotes tissue
T99147 5646-5657 GO:0001894 denotes homeostasis
T27315 5705-5713 SP_7 denotes COVID-19
T78962 5974-5978 UBERON:0002048 denotes lung
T33103 6050-6061 NCBITaxon:11118 denotes coronavirus
T53807 6088-6102 CL:0000623 denotes Natural Killer
T46360 6126-6137 NCBITaxon:1 denotes individuals
T12656 6148-6158 SP_7 denotes SARS-CoV-2
T43041 6193-6198 NCBITaxon:10239 denotes viral
T47723 6215-6225 GO:0009986 denotes surface of
T14747 6383-6392 GO:0006915 denotes apoptosis
T62188 6401-6406 GO:0016265 denotes death
T91621 6426-6434 GO:0042571 denotes antibody
T82485 6496-6516 GO:0051904 denotes release of cytotoxic
T19320 6517-6525 GO:0051904;GO:0009542 denotes granules
T5239 6563-6570 NCBITaxon:10239 denotes virally
T91348 6590-6603 GO:0030510 denotes modulation of
T33786 6608-6614 UBERON:0002405 denotes immune
T93186 6665-6671 GO:0045087 denotes innate
T91482 6672-6678 GO:0045087;UBERON:0002405 denotes immune
T93822 6679-6687 GO:0045087 denotes response
T57266 6709-6719 SP_7 denotes SARS-CoV-2
T13608 6754-6759 UBERON:0000170 denotes lungs
T15680 6785-6796 NCBITaxon:1 denotes individuals
T90335 6868-6878 SP_7 denotes SARS-CoV-2
T39310 6896-6902 UBERON:0002405 denotes immune
T3589 6938-6943 NCBITaxon:10239 denotes virus
T14594 6997-7007 UBERON:0000483;CL:0000066 denotes epithelial
T69489 7008-7013 CL:0000066 denotes cells
T72524 7025-7031 UBERON:0002405;CL:0000738 denotes immune
T48246 7032-7037 CL:0000738 denotes cells
T63161 7039-7047 CL:0000576 denotes monocyte
T81499 7048-7059 CL:0000235 denotes macrophages
T94629 7064-7075 CL:0000775 denotes neutrophils
T38783 7133-7139 UBERON:0002405 denotes immune
T43649 7174-7179 UBERON:0000170 denotes lungs
T83079 7242-7247 PR:000000017 denotes IFN-γ
T10457 7328-7332 UBERON:0002048 denotes lung
T25194 7356-7367 UBERON:0001004 denotes respiratory
T34166 7467-7475 SP_7 denotes COVID-19
T89117 7477-7487 SP_7 denotes SARS-CoV-2
T49115 7584-7589 NCBITaxon:10239 denotes viral
T20698 7623-7627 UBERON:0002048 denotes lung
T86084 7775-7777 GO:0006741 denotes NK
T64016 7778-7794 GO:0007219 denotes cell stimulation
T65428 7799-7804 PR:000000017;GO:1990774 denotes IFN-γ
T33972 7805-7815 GO:1990774 denotes production
T10413 7876-7890 GO:0001775 denotes stimulation of
T36047 8546-8551 NCBITaxon:10239 denotes viral
T65748 8626-8633 CL:0000623 denotes NK cell
T97006 8634-8642 CHEBI:35224;CHEBI:35224 denotes effector
T81749 8724-8728 UBERON:0002048 denotes lung
T37837 8766-8772 NCBITaxon:9606 denotes humans
T92302 8933-8939 UBERON:0002405;GO:0006955 denotes immune
T7992 8940-8948 GO:0006955 denotes response
T96233 8952-8965 NCBITaxon:11118 denotes coronaviruses
T86253 9063-9071 SP_7 denotes COVID-19

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T329 0-7 Body_part denotes NK Cell http://purl.org/sig/ont/fma/fma63147
T330 3-7 Body_part denotes Cell http://purl.org/sig/ont/fma/fma68646
T331 155-159 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T332 237-244 Body_part denotes tissues http://purl.org/sig/ont/fma/fma9637
T333 299-304 Body_part denotes lungs http://purl.org/sig/ont/fma/fma68877
T334 403-413 Body_part denotes pneumocyte http://purl.org/sig/ont/fma/fma62499
T335 515-523 Body_part denotes alveolar http://purl.org/sig/ont/fma/fma264783
T336 624-629 Body_part denotes lungs http://purl.org/sig/ont/fma/fma68877
T337 643-649 Body_part denotes tissue http://purl.org/sig/ont/fma/fma9637
T338 991-1000 Body_part denotes cytokines http://purl.org/sig/ont/fma/fma84050
T339 1001-1011 Body_part denotes chemokines http://purl.org/sig/ont/fma/fma241981
T340 1024-1029 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T341 1182-1195 Body_part denotes bronchiolitis http://purl.org/sig/ont/fma/fma76497
T342 1231-1239 Body_part denotes alveolar http://purl.org/sig/ont/fma/fma264783
T343 1338-1347 Body_part denotes cytokines http://purl.org/sig/ont/fma/fma84050
T344 1359-1361 Body_part denotes IL http://purl.org/sig/ont/fma/fma86578
T345 1369-1379 Body_part denotes chemokines http://purl.org/sig/ont/fma/fma241981
T346 1406-1413 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T347 1423-1431 Body_part denotes monocyte http://purl.org/sig/ont/fma/fma62864
T348 1448-1455 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T349 1465-1475 Body_part denotes macrophage http://purl.org/sig/ont/fma/fma63261
T350 1489-1496 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T351 1562-1578 Body_part denotes epithelial cells http://purl.org/sig/ont/fma/fma66768
T352 1573-1578 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T353 1580-1600 Body_part denotes alveolar macrophages http://purl.org/sig/ont/fma/fma83023
T354 1629-1637 Body_part denotes monocyte http://purl.org/sig/ont/fma/fma62864
T355 1638-1649 Body_part denotes macrophages http://purl.org/sig/ont/fma/fma63261
T356 1654-1665 Body_part denotes neutrophils http://purl.org/sig/ont/fma/fma62860
T357 1709-1729 Body_part denotes alveolar macrophages http://purl.org/sig/ont/fma/fma83023
T358 1802-1810 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T359 1944-1952 Body_part denotes monocyte http://purl.org/sig/ont/fma/fma62864
T360 1953-1963 Body_part denotes macrophage http://purl.org/sig/ont/fma/fma63261
T361 2033-2037 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T362 2054-2065 Body_part denotes macrophages http://purl.org/sig/ont/fma/fma63261
T363 2081-2084 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T364 2182-2202 Body_part denotes alveolar macrophages http://purl.org/sig/ont/fma/fma83023
T365 2204-2214 Body_part denotes Fatty Acid http://purl.org/sig/ont/fma/fma82738
T366 2223-2230 Body_part denotes Protein http://purl.org/sig/ont/fma/fma67257
T367 2337-2345 Body_part denotes monocyte http://purl.org/sig/ont/fma/fma62864
T368 2354-2365 Body_part denotes macrophages http://purl.org/sig/ont/fma/fma63261
T369 2426-2435 Body_part denotes cytokines http://purl.org/sig/ont/fma/fma84050
T370 2440-2450 Body_part denotes chemokines http://purl.org/sig/ont/fma/fma241981
T371 2478-2486 Body_part denotes NK cells http://purl.org/sig/ont/fma/fma63147
T372 2481-2486 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T373 2520-2531 Body_part denotes macrophages http://purl.org/sig/ont/fma/fma63261
T374 2540-2545 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T375 2554-2559 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T376 2567-2572 Body_part denotes lungs http://purl.org/sig/ont/fma/fma68877
T377 2658-2667 Body_part denotes cytokines http://purl.org/sig/ont/fma/fma84050
T378 2675-2677 Body_part denotes IL http://purl.org/sig/ont/fma/fma86578
T379 2688-2692 Body_part denotes IL-2 http://purl.org/sig/ont/fma/fma84051
T380 2688-2690 Body_part denotes IL http://purl.org/sig/ont/fma/fma86578
T381 2694-2696 Body_part denotes IL http://purl.org/sig/ont/fma/fma86578
T382 2704-2714 Body_part denotes chemokines http://purl.org/sig/ont/fma/fma241981
T383 2809-2813 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T384 2832-2837 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T385 2842-2853 Body_part denotes neutrophils http://purl.org/sig/ont/fma/fma62860
T386 2966-2975 Body_part denotes cytokines http://purl.org/sig/ont/fma/fma84050
T387 2980-2990 Body_part denotes chemokines http://purl.org/sig/ont/fma/fma241981
T388 2998-3003 Body_part denotes blood http://purl.org/sig/ont/fma/fma9670
T389 3008-3013 Body_part denotes lungs http://purl.org/sig/ont/fma/fma68877
T390 3090-3095 Body_part denotes lungs http://purl.org/sig/ont/fma/fma68877
T391 3117-3121 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T392 3188-3196 Body_part denotes cytokine http://purl.org/sig/ont/fma/fma84050
T393 3197-3206 Body_part denotes chemokine http://purl.org/sig/ont/fma/fma241981
T394 3314-3322 Body_part denotes cytokine http://purl.org/sig/ont/fma/fma84050
T395 3481-3483 Body_part denotes IL http://purl.org/sig/ont/fma/fma86578
T396 3511-3513 Body_part denotes IL http://purl.org/sig/ont/fma/fma86578
T397 3599-3601 Body_part denotes IL http://purl.org/sig/ont/fma/fma86578
T398 3750-3760 Body_part denotes lymphocyte http://purl.org/sig/ont/fma/fma62863
T399 3825-3835 Body_part denotes lymphocyte http://purl.org/sig/ont/fma/fma62863
T400 3866-3875 Body_part denotes chemokine http://purl.org/sig/ont/fma/fma241981
T401 3886-3897 Body_part denotes lymphocytes http://purl.org/sig/ont/fma/fma62863
T402 3905-3910 Body_part denotes lungs http://purl.org/sig/ont/fma/fma68877
T403 4079-4088 Body_part denotes cytokines http://purl.org/sig/ont/fma/fma84050
T404 4090-4092 Body_part denotes IL http://purl.org/sig/ont/fma/fma86578
T405 4097-4099 Body_part denotes IL http://purl.org/sig/ont/fma/fma86578
T406 4105-4107 Body_part denotes IL http://purl.org/sig/ont/fma/fma86578
T407 4111-4113 Body_part denotes IL http://purl.org/sig/ont/fma/fma86578
T408 4117-4119 Body_part denotes IL http://purl.org/sig/ont/fma/fma86578
T409 4153-4161 Body_part denotes cytokine http://purl.org/sig/ont/fma/fma84050
T410 4233-4241 Body_part denotes cytokine http://purl.org/sig/ont/fma/fma84050
T411 4362-4371 Body_part denotes cytokines http://purl.org/sig/ont/fma/fma84050
T412 4646-4654 Body_part denotes monocyte http://purl.org/sig/ont/fma/fma62864
T413 4655-4666 Body_part denotes macrophages http://purl.org/sig/ont/fma/fma63261
T414 4671-4682 Body_part denotes neutrophils http://purl.org/sig/ont/fma/fma62860
T415 4701-4706 Body_part denotes lungs http://purl.org/sig/ont/fma/fma68877
T416 4719-4728 Body_part denotes cytokines http://purl.org/sig/ont/fma/fma84050
T417 4733-4743 Body_part denotes chemokines http://purl.org/sig/ont/fma/fma241981
T418 4788-4799 Body_part denotes lymphocytes http://purl.org/sig/ont/fma/fma62863
T419 4811-4819 Body_part denotes NK cells http://purl.org/sig/ont/fma/fma63147
T420 4814-4819 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T421 4828-4833 Body_part denotes lungs http://purl.org/sig/ont/fma/fma68877
T422 4928-4932 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T423 4933-4941 Body_part denotes NK cells http://purl.org/sig/ont/fma/fma63147
T424 4936-4941 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T425 5019-5026 Body_part denotes tissues http://purl.org/sig/ont/fma/fma9637
T426 5151-5159 Body_part denotes NK cells http://purl.org/sig/ont/fma/fma63147
T427 5154-5159 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T428 5265-5269 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T429 5270-5273 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T430 5426-5433 Body_part denotes NK cell http://purl.org/sig/ont/fma/fma63147
T431 5429-5433 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T432 5434-5445 Body_part denotes compartment http://purl.org/sig/ont/fma/fma76577
T433 5498-5514 Body_part denotes endothelial cell http://purl.org/sig/ont/fma/fma66772
T434 5510-5514 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T435 5560-5564 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T436 5615-5626 Body_part denotes macrophages http://purl.org/sig/ont/fma/fma63261
T437 5639-5645 Body_part denotes tissue http://purl.org/sig/ont/fma/fma9637
T438 5796-5804 Body_part denotes NK cells http://purl.org/sig/ont/fma/fma63147
T439 5799-5804 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T440 5825-5833 Body_part denotes cytokine http://purl.org/sig/ont/fma/fma84050
T441 5974-5978 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T442 6034-6042 Body_part denotes NK cells http://purl.org/sig/ont/fma/fma63147
T443 6037-6042 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T444 6108-6113 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T445 6168-6173 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T446 6199-6207 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T447 6235-6240 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T448 6264-6273 Body_part denotes cytokines http://purl.org/sig/ont/fma/fma84050
T449 6278-6288 Body_part denotes chemokines http://purl.org/sig/ont/fma/fma241981
T450 6330-6335 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T451 6426-6434 Body_part denotes antibody http://purl.org/sig/ont/fma/fma62871
T452 6445-6449 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T453 6580-6585 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T454 6632-6640 Body_part denotes cytokine http://purl.org/sig/ont/fma/fma84050
T455 6754-6759 Body_part denotes lungs http://purl.org/sig/ont/fma/fma68877
T456 6820-6828 Body_part denotes NK cells http://purl.org/sig/ont/fma/fma63147
T457 6823-6828 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T458 6997-7013 Body_part denotes epithelial cells http://purl.org/sig/ont/fma/fma66768
T459 7008-7013 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T460 7032-7037 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T461 7039-7047 Body_part denotes monocyte http://purl.org/sig/ont/fma/fma62864
T462 7048-7059 Body_part denotes macrophages http://purl.org/sig/ont/fma/fma63261
T463 7064-7075 Body_part denotes neutrophils http://purl.org/sig/ont/fma/fma62860
T464 7085-7094 Body_part denotes cytokines http://purl.org/sig/ont/fma/fma84050
T465 7100-7110 Body_part denotes chemokines http://purl.org/sig/ont/fma/fma241981
T466 7140-7145 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T467 7157-7165 Body_part denotes NK cells http://purl.org/sig/ont/fma/fma63147
T468 7160-7165 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T469 7174-7179 Body_part denotes lungs http://purl.org/sig/ont/fma/fma68877
T470 7219-7227 Body_part denotes cytokine http://purl.org/sig/ont/fma/fma84050
T471 7328-7332 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T472 7525-7532 Body_part denotes NK cell http://purl.org/sig/ont/fma/fma63147
T473 7528-7532 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T474 7623-7627 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T475 7667-7674 Body_part denotes NK cell http://purl.org/sig/ont/fma/fma63147
T476 7670-7674 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T477 7775-7782 Body_part denotes NK cell http://purl.org/sig/ont/fma/fma63147
T478 7778-7782 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T479 7891-7899 Body_part denotes NK cells http://purl.org/sig/ont/fma/fma63147
T480 7894-7899 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T481 7917-7924 Body_part denotes NK cell http://purl.org/sig/ont/fma/fma63147
T482 7920-7924 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T483 8152-8160 Body_part denotes NK cells http://purl.org/sig/ont/fma/fma63147
T484 8155-8160 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T485 8256-8263 Body_part denotes NK cell http://purl.org/sig/ont/fma/fma63147
T486 8259-8263 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T487 8519-8526 Body_part denotes NK cell http://purl.org/sig/ont/fma/fma63147
T488 8522-8526 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T489 8626-8633 Body_part denotes NK cell http://purl.org/sig/ont/fma/fma63147
T490 8629-8633 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T491 8724-8728 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T29 155-159 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T30 441-457 Body_part denotes submucosal gland http://purl.obolibrary.org/obo/UBERON_0011148
T31 452-457 Body_part denotes gland http://purl.obolibrary.org/obo/UBERON_0002530
T32 643-649 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T33 2033-2037 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T34 2809-2813 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T35 2998-3003 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178
T36 4928-4932 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T37 5639-5645 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T38 5974-5978 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T39 7328-7332 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T40 7623-7627 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T41 8724-8728 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T214 149-166 Disease denotes acute lung injury http://purl.obolibrary.org/obo/MONDO_0006502|http://purl.obolibrary.org/obo/MONDO_0015796
T216 160-166 Disease denotes injury http://purl.obolibrary.org/obo/MONDO_0021178
T217 168-171 Disease denotes ALI http://purl.obolibrary.org/obo/MONDO_0006502
T218 196-200 Disease denotes ARDS http://purl.obolibrary.org/obo/MONDO_0006502
T219 259-263 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T220 414-425 Disease denotes hyperplasia http://purl.obolibrary.org/obo/MONDO_0005043
T221 555-575 Disease denotes organizing pneumonia http://purl.obolibrary.org/obo/MONDO_0015265|http://purl.obolibrary.org/obo/MONDO_0056821
T223 566-575 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T224 709-712 Disease denotes ALI http://purl.obolibrary.org/obo/MONDO_0006502
T225 804-816 Disease denotes inflammation http://purl.obolibrary.org/obo/MONDO_0021166
T226 829-837 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T227 829-833 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T228 887-896 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T229 1055-1064 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T230 1102-1110 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T231 1102-1106 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T232 1182-1195 Disease denotes bronchiolitis http://purl.obolibrary.org/obo/MONDO_0002465
T233 1210-1221 Disease denotes pneumonitis http://purl.obolibrary.org/obo/MONDO_0043905
T234 1261-1269 Disease denotes scarring http://purl.obolibrary.org/obo/MONDO_0005594
T235 1741-1749 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T236 1741-1745 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T237 1983-1991 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T238 2268-2272 Disease denotes ARDS http://purl.obolibrary.org/obo/MONDO_0006502
T239 2380-2388 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T240 2380-2384 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T241 2391-2400 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T242 2647-2656 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T243 3017-3021 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T244 3067-3071 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T245 3237-3241 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T246 3242-3251 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T247 3983-3987 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T248 4171-4179 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T249 4397-4405 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T250 4622-4631 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T251 5074-5084 Disease denotes infectious http://purl.obolibrary.org/obo/MONDO_0005550
T252 5085-5105 Disease denotes respiratory diseases http://purl.obolibrary.org/obo/MONDO_0005087
T253 5336-5344 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T254 5663-5667 Disease denotes ARDS http://purl.obolibrary.org/obo/MONDO_0006502
T255 5705-5713 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T256 5860-5869 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T257 5952-5964 Disease denotes inflammation http://purl.obolibrary.org/obo/MONDO_0021166
T258 6148-6156 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T259 6148-6152 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T260 6313-6322 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T261 6473-6477 Disease denotes ADCC http://purl.obolibrary.org/obo/MONDO_0008734
T262 6709-6717 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T263 6709-6713 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T264 6720-6729 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T265 6868-6876 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T266 6868-6872 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T267 6879-6888 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T268 7322-7339 Disease denotes acute lung injury http://purl.obolibrary.org/obo/MONDO_0006502|http://purl.obolibrary.org/obo/MONDO_0015796
T270 7333-7339 Disease denotes injury http://purl.obolibrary.org/obo/MONDO_0021178
T271 7341-7344 Disease denotes ALI http://purl.obolibrary.org/obo/MONDO_0006502
T272 7350-7385 Disease denotes acute respiratory distress syndrome http://purl.obolibrary.org/obo/MONDO_0006502
T273 7356-7385 Disease denotes respiratory distress syndrome http://purl.obolibrary.org/obo/MONDO_0009971
T274 7387-7391 Disease denotes ARDS http://purl.obolibrary.org/obo/MONDO_0006502
T275 7467-7475 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T276 7477-7485 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T277 7477-7481 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T278 7488-7497 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T279 7840-7850 Disease denotes infections http://purl.obolibrary.org/obo/MONDO_0005550
T280 8003-8015 Disease denotes inflammation http://purl.obolibrary.org/obo/MONDO_0021166
T281 8597-8606 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T282 8667-8677 Disease denotes infections http://purl.obolibrary.org/obo/MONDO_0005550
T283 8777-8785 Disease denotes zoonoses http://purl.obolibrary.org/obo/MONDO_0025481
T284 9063-9071 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T383 0-7 http://purl.obolibrary.org/obo/CL_0000623 denotes NK Cell
T384 155-159 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T385 155-159 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T386 299-304 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lungs
T387 344-354 http://purl.obolibrary.org/obo/CL_0000066 denotes epithelial
T388 452-457 http://purl.obolibrary.org/obo/UBERON_0002530 denotes gland
T389 452-457 http://www.ebi.ac.uk/efo/EFO_0000797 denotes gland
T390 555-565 http://purl.obolibrary.org/obo/OBI_0000245 denotes organizing
T391 582-583 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T392 624-629 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lungs
T393 657-660 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T394 1024-1029 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T395 1053-1054 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T396 1182-1195 http://purl.obolibrary.org/obo/UBERON_0002186 denotes bronchiolitis
T397 1293-1294 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T398 1381-1397 http://purl.obolibrary.org/obo/PR_000000017 denotes interferon gamma
T399 1423-1431 http://purl.obolibrary.org/obo/CL_0000576 denotes monocyte
T400 1555-1561 http://purl.obolibrary.org/obo/UBERON_0001005 denotes airway
T401 1562-1572 http://purl.obolibrary.org/obo/CL_0000066 denotes epithelial
T402 1573-1578 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T403 1629-1637 http://purl.obolibrary.org/obo/CL_0000576 denotes monocyte
T404 1944-1952 http://purl.obolibrary.org/obo/CL_0000576 denotes monocyte
T405 2033-2037 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T406 2033-2037 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T407 2337-2345 http://purl.obolibrary.org/obo/CL_0000576 denotes monocyte
T408 2478-2486 http://purl.obolibrary.org/obo/CL_0000623 denotes NK cells
T409 2515-2518 http://purl.obolibrary.org/obo/CL_0000451 denotes DCs
T410 2533-2536 http://purl.obolibrary.org/obo/PR_000001004 denotes CD4
T411 2538-2545 http://purl.obolibrary.org/obo/CL_0000084 denotes T cells
T412 2554-2559 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T413 2567-2572 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lungs
T414 2574-2575 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T415 2688-2692 http://purl.obolibrary.org/obo/PR_000001379 denotes IL-2
T416 2809-2813 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T417 2809-2813 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T418 2830-2837 http://purl.obolibrary.org/obo/CL_0000084 denotes T cells
T419 2940-2950 http://purl.obolibrary.org/obo/CLO_0001658 denotes activating
T420 2998-3003 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood
T421 2998-3003 http://www.ebi.ac.uk/efo/EFO_0000296 denotes blood
T422 3008-3013 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lungs
T423 3090-3095 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lungs
T424 3117-3121 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T425 3255-3256 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T426 3484-3486 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T427 3511-3515 http://purl.obolibrary.org/obo/CLO_0053704 denotes IL-8
T428 3602-3604 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T429 3905-3910 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lungs
T430 3949-3952 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T431 4022-4023 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T432 4090-4095 http://purl.obolibrary.org/obo/PR_000001136 denotes IL-1b
T433 4111-4115 http://purl.obolibrary.org/obo/CLO_0053704 denotes IL-8
T434 4120-4122 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T435 4646-4654 http://purl.obolibrary.org/obo/CL_0000576 denotes monocyte
T436 4701-4706 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lungs
T437 4760-4770 http://purl.obolibrary.org/obo/CLO_0001658 denotes activation
T438 4811-4819 http://purl.obolibrary.org/obo/CL_0000623 denotes NK cells
T439 4828-4833 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lungs
T440 4891-4894 http://purl.obolibrary.org/obo/CLO_0001079 denotes 148
T441 4922-4927 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T442 4928-4932 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T443 4928-4932 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T444 4933-4941 http://purl.obolibrary.org/obo/CL_0000623 denotes NK cells
T445 5151-5159 http://purl.obolibrary.org/obo/CL_0000623 denotes NK cells
T446 5265-5269 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T447 5355-5356 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T448 5426-5433 http://purl.obolibrary.org/obo/CL_0000623 denotes NK cell
T449 5483-5493 http://purl.obolibrary.org/obo/CL_0000066 denotes epithelial
T450 5498-5514 http://purl.obolibrary.org/obo/CL_0000115 denotes endothelial cell
T451 5558-5564 http://purl.obolibrary.org/obo/CL_0000084 denotes T cell
T452 5605-5614 http://purl.obolibrary.org/obo/CLO_0001658 denotes activated
T453 5796-5804 http://purl.obolibrary.org/obo/CL_0000623 denotes NK cells
T454 5974-5978 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T455 5974-5978 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T456 6034-6042 http://purl.obolibrary.org/obo/CL_0000623 denotes NK cells
T457 6077-6078 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T458 6103-6113 http://purl.obolibrary.org/obo/CL_0000623 denotes (NK) cells
T459 6168-6173 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T460 6235-6240 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T461 6330-6335 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T462 6445-6449 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T463 6580-6585 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T464 6754-6759 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lungs
T465 6772-6773 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T466 6820-6828 http://purl.obolibrary.org/obo/CL_0000623 denotes NK cells
T467 6938-6943 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T468 6997-7007 http://purl.obolibrary.org/obo/CL_0000066 denotes epithelial
T469 7008-7013 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T470 7032-7037 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T471 7039-7047 http://purl.obolibrary.org/obo/CL_0000576 denotes monocyte
T472 7140-7145 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T473 7157-7165 http://purl.obolibrary.org/obo/CL_0000623 denotes NK cells
T474 7174-7179 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lungs
T475 7217-7218 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T476 7328-7332 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T477 7328-7332 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T478 7525-7532 http://purl.obolibrary.org/obo/CL_0000623 denotes NK cell
T479 7623-7627 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T480 7623-7627 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T481 7667-7674 http://purl.obolibrary.org/obo/CL_0000623 denotes NK cell
T482 7775-7782 http://purl.obolibrary.org/obo/CL_0000623 denotes NK cell
T483 7891-7899 http://purl.obolibrary.org/obo/CL_0000623 denotes NK cells
T484 7917-7924 http://purl.obolibrary.org/obo/CL_0000623 denotes NK cell
T485 8152-8160 http://purl.obolibrary.org/obo/CL_0000623 denotes NK cells
T486 8256-8263 http://purl.obolibrary.org/obo/CL_0000623 denotes NK cell
T487 8293-8294 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T488 8519-8526 http://purl.obolibrary.org/obo/CL_0000623 denotes NK cell
T489 8527-8535 http://purl.obolibrary.org/obo/CLO_0001658 denotes activity
T490 8626-8633 http://purl.obolibrary.org/obo/CL_0000623 denotes NK cell
T491 8724-8728 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T492 8724-8728 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T493 8766-8772 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T494 8850-8851 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T495 8902-8903 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T52 1359-1361 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T54 1381-1391 Chemical denotes interferon http://purl.obolibrary.org/obo/CHEBI_52999
T55 1392-1397 Chemical denotes gamma http://purl.obolibrary.org/obo/CHEBI_30212
T56 1406-1413 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T57 1415-1417 Chemical denotes IP http://purl.obolibrary.org/obo/CHEBI_74076
T58 1448-1455 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T59 1457-1460 Chemical denotes MCP http://purl.obolibrary.org/obo/CHEBI_132592|http://purl.obolibrary.org/obo/CHEBI_50099
T61 1489-1496 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T62 1802-1810 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T63 1831-1841 Chemical denotes interferon http://purl.obolibrary.org/obo/CHEBI_52999
T64 2210-2214 Chemical denotes Acid http://purl.obolibrary.org/obo/CHEBI_37527
T65 2223-2230 Chemical denotes Protein http://purl.obolibrary.org/obo/CHEBI_16541
T66 2675-2677 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T68 2688-2690 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T70 2694-2696 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T72 2715-2718 Chemical denotes MCP http://purl.obolibrary.org/obo/CHEBI_132592|http://purl.obolibrary.org/obo/CHEBI_50099
T74 2758-2763 Chemical denotes gamma http://purl.obolibrary.org/obo/CHEBI_30212
T75 2764-2774 Chemical denotes interferon http://purl.obolibrary.org/obo/CHEBI_52999
T76 2782-2787 Chemical denotes IP-10 http://purl.obolibrary.org/obo/CHEBI_138157
T77 2782-2784 Chemical denotes IP http://purl.obolibrary.org/obo/CHEBI_74076
T78 3413-3429 Chemical denotes immunomodulators http://purl.obolibrary.org/obo/CHEBI_50846
T79 3481-3483 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T81 3488-3493 Chemical denotes IP-10 http://purl.obolibrary.org/obo/CHEBI_138157
T82 3488-3490 Chemical denotes IP http://purl.obolibrary.org/obo/CHEBI_74076
T83 3495-3498 Chemical denotes MCP http://purl.obolibrary.org/obo/CHEBI_132592|http://purl.obolibrary.org/obo/CHEBI_50099
T85 3511-3513 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T87 3576-3581 Chemical denotes IP-10 http://purl.obolibrary.org/obo/CHEBI_138157
T88 3576-3578 Chemical denotes IP http://purl.obolibrary.org/obo/CHEBI_74076
T89 3588-3591 Chemical denotes MCP http://purl.obolibrary.org/obo/CHEBI_132592|http://purl.obolibrary.org/obo/CHEBI_50099
T91 3599-3601 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T93 4090-4092 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T95 4097-4099 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T97 4105-4107 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T99 4111-4113 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T101 4117-4119 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T103 6199-6207 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T104 7290-7298 Chemical denotes catalyst http://purl.obolibrary.org/obo/CHEBI_35223
T105 8634-8642 Chemical denotes effector http://purl.obolibrary.org/obo/CHEBI_35224

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
807 16-27 Species denotes Coronavirus Tax:11118
820 62-66 Species denotes CoVs Tax:11118
821 273-281 Species denotes patients Tax:9606
822 98-107 Disease denotes mortality MESH:D003643
823 149-166 Disease denotes acute lung injury MESH:D055371
824 196-200 Disease denotes ARDS MESH:D012128
825 289-304 Disease denotes edematous lungs MESH:D008171
826 367-380 Disease denotes loss of cilia MESH:C536287
827 382-401 Disease denotes squamous metaplasia MESH:D008679
828 403-425 Disease denotes pneumocyte hyperplasia MESH:D006965
829 458-466 Disease denotes necrosis MESH:D009336
830 515-530 Disease denotes alveolar damage MESH:D055370
831 566-575 Disease denotes pneumonia MESH:D011014
858 1349-1354 Gene denotes TNF-α Gene:7124
859 1359-1363 Gene denotes IL-6 Gene:3569
860 1423-1463 Gene denotes monocyte chemoattractant protein (MCP)-1 Gene:6347
861 1465-1505 Gene denotes macrophage inflammatory protein (MIP)-1a Gene:6348
862 1507-1513 Gene denotes RANTES Gene:6352
863 2204-2230 Gene denotes Fatty Acid Binding Protein Gene:2806
864 2232-2238 Gene denotes FABP)4 Gene:2167
865 2329-2333 Gene denotes FCN1 Gene:2219
866 829-837 Species denotes SARS-CoV Tax:694009
867 844-852 Species denotes MERS-CoV Tax:1335626
868 1102-1110 Species denotes SARS-CoV Tax:694009
869 1741-1749 Species denotes SARS-CoV Tax:694009
870 1756-1764 Species denotes MERS-CoV Tax:1335626
871 1992-2000 Species denotes patients Tax:9606
872 2131-2139 Species denotes Patients Tax:9606
873 2247-2255 Species denotes patients Tax:9606
874 804-816 Disease denotes inflammation MESH:D007249
875 887-896 Disease denotes infection MESH:D007239
876 1015-1023 Disease denotes infected MESH:D007239
877 1055-1064 Disease denotes pneumonia MESH:D011014
878 1182-1195 Disease denotes bronchiolitis MESH:D001988
879 1210-1221 Disease denotes pneumonitis MESH:D011014
880 1231-1246 Disease denotes alveolar damage MESH:D055370
881 1546-1554 Disease denotes infected MESH:D007239
882 1983-1991 Disease denotes COVID-19 MESH:C000657245
883 2268-2272 Disease denotes ARDS MESH:D012128
926 2533-2536 Gene denotes CD4 Gene:920
927 2668-2673 Gene denotes TNF-α Gene:7124
928 2675-2679 Gene denotes IL-6 Gene:3569
929 2681-2686 Gene denotes IFN-γ Gene:3458
930 2688-2692 Gene denotes IL-2 Gene:3558
931 2694-2698 Gene denotes IL-5 Gene:3567
932 2722-2728 Gene denotes MIP-1a Gene:6348
933 2730-2736 Gene denotes RANTES Gene:6352
934 2738-2774 Gene denotes monokine induced by gamma interferon Gene:4283
935 2776-2779 Gene denotes MIG Gene:4283
936 2782-2787 Gene denotes IP-10 Gene:3627
937 3304-3309 Gene denotes IFN-γ Gene:3458
938 3474-3479 Gene denotes IFN-γ Gene:3458
939 3481-3486 Gene denotes IL-18 Gene:3606
940 3488-3493 Gene denotes IP-10 Gene:3627
941 3502-3505 Gene denotes MIG Gene:4283
942 3511-3515 Gene denotes IL-8 Gene:3576
943 3576-3581 Gene denotes IP-10 Gene:3627
944 3583-3586 Gene denotes MIG Gene:4283
945 3599-3604 Gene denotes IL-18 Gene:3606
946 3733-3738 Gene denotes IFN-γ Gene:3458
947 3811-3816 Gene denotes IFN-γ Gene:3458
948 4090-4095 Gene denotes IL-1b Gene:3553
949 4097-4103 Gene denotes IL-1Ra Gene:3554
950 4105-4109 Gene denotes IL-6 Gene:3569
951 4111-4115 Gene denotes IL-8 Gene:3576
952 4117-4122 Gene denotes IL-18 Gene:3606
953 4128-4133 Gene denotes TNF-α Gene:7124
954 3022-3030 Species denotes patients Tax:9606
955 3277-3285 Species denotes patients Tax:9606
956 3373-3381 Species denotes patients Tax:9606
957 3997-4005 Species denotes patients Tax:9606
958 4180-4188 Species denotes patients Tax:9606
959 2380-2400 Disease denotes SARS-CoV-1 pneumonia MESH:C000657245
960 2647-2656 Disease denotes infection MESH:D007239
961 3076-3089 Disease denotes MERS-infected MESH:D018352
962 3242-3251 Disease denotes infection MESH:D007239
963 3648-3653 Disease denotes death MESH:D003643
964 3931-3948 Disease denotes hyper-cytokinemia MESH:D053306
965 3983-3996 Disease denotes SARS-infected MESH:D045169
966 4171-4179 Disease denotes COVID-19 MESH:C000657245
967 4397-4405 Disease denotes COVID-19 MESH:C000657245
981 4884-4889 Gene denotes IFN-γ Gene:3458
982 5468-5473 Gene denotes IFN-γ Gene:3458
983 4922-4927 Species denotes human Tax:9606
984 5315-5323 Species denotes patients Tax:9606
985 4618-4631 Disease denotes CoV infection MESH:D018352
986 4956-4970 Disease denotes hyporesponsive MESH:C566417
987 5085-5105 Disease denotes respiratory diseases MESH:D012140
988 5336-5344 Disease denotes COVID-19 MESH:C000657245
989 5663-5667 Disease denotes ARDS MESH:D012128
990 5705-5713 Disease denotes COVID-19 MESH:C000657245
991 5856-5869 Disease denotes CoV infection MESH:D018352
992 5884-5901 Disease denotes hyper-cytokinemia MESH:D053306
993 5952-5985 Disease denotes inflammation-mediated lung damage MESH:D011014
1014 7242-7247 Gene denotes IFN-γ Gene:3458
1015 6050-6061 Species denotes coronavirus Tax:11118
1016 6744-6751 Species denotes patient Tax:9606
1017 6148-6167 Disease denotes SARS-CoV-2 infected MESH:C000657245
1018 6226-6234 Disease denotes infected MESH:D007239
1019 6313-6322 Disease denotes infection MESH:D007239
1020 6401-6406 Disease denotes death MESH:D003643
1021 6459-6471 Disease denotes cytotoxicity MESH:D064420
1022 6571-6579 Disease denotes infected MESH:D007239
1023 6709-6729 Disease denotes SARS-CoV-2 infection MESH:C000657245
1024 6806-6819 Disease denotes dysfunctional MESH:D009461
1025 6868-6888 Disease denotes SARS-CoV-2 infection MESH:C000657245
1026 6988-6996 Disease denotes infected MESH:D007239
1027 7322-7339 Disease denotes acute lung injury MESH:D055371
1028 7350-7385 Disease denotes acute respiratory distress syndrome MESH:D012128
1029 7387-7391 Disease denotes ARDS MESH:D012128
1030 7441-7450 Disease denotes mortality MESH:D003643
1031 7467-7475 Disease denotes COVID-19 MESH:C000657245
1032 7477-7497 Disease denotes SARS-CoV-2 infection MESH:C000657245
1033 7623-7634 Disease denotes lung damage MESH:D008171
1042 7799-7804 Gene denotes IFN-γ Gene:3458
1043 7720-7728 Species denotes patients Tax:9606
1044 7705-7719 Disease denotes critically ill MESH:D016638
1045 7734-7740 Disease denotes sepsis MESH:D018805
1046 7840-7850 Disease denotes infections MESH:D007239
1047 8003-8015 Disease denotes inflammation MESH:D007249
1048 8066-8072 Disease denotes sepsis MESH:D018805
1049 8087-8096 Disease denotes mortality MESH:D003643
1063 8196-8199 Species denotes CoV Tax:11118
1064 8326-8329 Species denotes CoV Tax:11118
1065 8409-8416 Species denotes patient Tax:9606
1066 8749-8753 Species denotes CoVs Tax:11118
1067 8766-8772 Species denotes humans Tax:9606
1068 8825-8829 Species denotes CoVs Tax:11118
1069 8952-8965 Species denotes coronaviruses Tax:11118
1070 8597-8606 Disease denotes infection MESH:D007239
1071 8667-8677 Disease denotes infections MESH:D007239
1072 8689-8706 Disease denotes hyper-cytokinemia MESH:D053306
1073 8724-8735 Disease denotes lung damage MESH:D008171
1074 8777-8785 Disease denotes zoonoses MESH:D015047
1075 9063-9071 Disease denotes COVID-19 MESH:C000657245

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T39 149-166 Phenotype denotes acute lung injury http://www.orpha.net/ORDO/Orphanet_178320
T40 168-171 Phenotype denotes ALI http://www.orpha.net/ORDO/Orphanet_178320
T41 507-530 Phenotype denotes diffuse alveolar damage http://purl.obolibrary.org/obo/HP_0033006
T42 566-575 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T43 709-712 Phenotype denotes ALI http://www.orpha.net/ORDO/Orphanet_178320
T44 1055-1064 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T45 1182-1195 Phenotype denotes bronchiolitis http://purl.obolibrary.org/obo/HP_0011950
T46 1197-1221 Phenotype denotes interstitial pneumonitis http://purl.obolibrary.org/obo/HP_0006515
T47 1223-1246 Phenotype denotes diffuse alveolar damage http://purl.obolibrary.org/obo/HP_0033006
T48 1261-1269 Phenotype denotes scarring http://purl.obolibrary.org/obo/HP_0100699
T49 2033-2050 Phenotype denotes lung infiltration http://purl.obolibrary.org/obo/HP_0002113
T50 2391-2400 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T51 2809-2826 Phenotype denotes lung infiltration http://purl.obolibrary.org/obo/HP_0002113
T52 3314-3328 Phenotype denotes cytokine storm http://purl.obolibrary.org/obo/HP_0033041
T53 3931-3948 Phenotype denotes hyper-cytokinemia http://purl.obolibrary.org/obo/HP_0033041
T54 4153-4167 Phenotype denotes cytokine storm http://purl.obolibrary.org/obo/HP_0033041
T55 4233-4248 Phenotype denotes cytokine storms http://purl.obolibrary.org/obo/HP_0033041
T56 5825-5839 Phenotype denotes cytokine storm http://purl.obolibrary.org/obo/HP_0033041
T57 5884-5901 Phenotype denotes hyper-cytokinemia http://purl.obolibrary.org/obo/HP_0033041
T58 7219-7233 Phenotype denotes cytokine storm http://purl.obolibrary.org/obo/HP_0033041
T59 7322-7339 Phenotype denotes acute lung injury http://www.orpha.net/ORDO/Orphanet_178320
T60 7341-7344 Phenotype denotes ALI http://www.orpha.net/ORDO/Orphanet_178320
T61 7356-7376 Phenotype denotes respiratory distress http://purl.obolibrary.org/obo/HP_0002098
T62 7734-7740 Phenotype denotes sepsis http://purl.obolibrary.org/obo/HP_0100806
T63 7909-7932 Phenotype denotes reduced NK cell numbers http://purl.obolibrary.org/obo/HP_0040218
T64 8066-8072 Phenotype denotes sepsis http://purl.obolibrary.org/obo/HP_0100806
T65 8689-8706 Phenotype denotes hyper-cytokinemia http://purl.obolibrary.org/obo/HP_0033041

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T83 391-401 http://purl.obolibrary.org/obo/GO_0036074 denotes metaplasia
T84 458-466 http://purl.obolibrary.org/obo/GO_0070265 denotes necrosis
T85 458-466 http://purl.obolibrary.org/obo/GO_0019835 denotes necrosis
T86 458-466 http://purl.obolibrary.org/obo/GO_0008219 denotes necrosis
T87 458-466 http://purl.obolibrary.org/obo/GO_0001906 denotes necrosis
T88 595-616 http://purl.obolibrary.org/obo/GO_0006954 denotes inflammatory response
T89 804-816 http://purl.obolibrary.org/obo/GO_0006954 denotes inflammation
T90 1304-1328 http://purl.obolibrary.org/obo/GO_0002456 denotes cellular immune response
T91 1304-1328 http://purl.obolibrary.org/obo/GO_0002449 denotes cellular immune response
T92 1304-1328 http://purl.obolibrary.org/obo/GO_0002443 denotes cellular immune response
T93 1313-1328 http://purl.obolibrary.org/obo/GO_0006955 denotes immune response
T94 1882-1904 http://purl.obolibrary.org/obo/GO_0045087 denotes innate immune response
T95 1889-1904 http://purl.obolibrary.org/obo/GO_0006955 denotes immune response
T96 3825-3845 http://purl.obolibrary.org/obo/GO_0070227 denotes lymphocyte apoptosis
T97 3836-3845 http://purl.obolibrary.org/obo/GO_0097194 denotes apoptosis
T98 3836-3845 http://purl.obolibrary.org/obo/GO_0006915 denotes apoptosis
T99 4097-4103 http://purl.obolibrary.org/obo/GO_0005152 denotes IL-1Ra
T100 4476-4491 http://purl.obolibrary.org/obo/GO_0006955 denotes immune response
T101 5498-5524 http://purl.obolibrary.org/obo/GO_0072577 denotes endothelial cell apoptosis
T102 5515-5524 http://purl.obolibrary.org/obo/GO_0097194 denotes apoptosis
T103 5515-5524 http://purl.obolibrary.org/obo/GO_0006915 denotes apoptosis
T104 5639-5657 http://purl.obolibrary.org/obo/GO_0001894 denotes tissue homeostasis
T105 5646-5657 http://purl.obolibrary.org/obo/GO_0042592 denotes homeostasis
T106 5952-5964 http://purl.obolibrary.org/obo/GO_0006954 denotes inflammation
T107 6062-6074 http://purl.obolibrary.org/obo/GO_0009405 denotes pathogenesis
T108 6383-6392 http://purl.obolibrary.org/obo/GO_0097194 denotes apoptosis
T109 6383-6392 http://purl.obolibrary.org/obo/GO_0006915 denotes apoptosis
T110 6473-6477 http://purl.obolibrary.org/obo/GO_0001788 denotes ADCC
T111 6608-6623 http://purl.obolibrary.org/obo/GO_0006955 denotes immune response
T112 6632-6650 http://purl.obolibrary.org/obo/GO_0001816 denotes cytokine secretion
T113 6641-6650 http://purl.obolibrary.org/obo/GO_0046903 denotes secretion
T114 6665-6687 http://purl.obolibrary.org/obo/GO_0045087 denotes innate immune response
T115 6672-6687 http://purl.obolibrary.org/obo/GO_0006955 denotes immune response
T116 6896-6910 http://purl.obolibrary.org/obo/GO_0042783 denotes immune evasion
T117 7018-7031 http://purl.obolibrary.org/obo/GO_0045087 denotes innate immune
T118 8003-8015 http://purl.obolibrary.org/obo/GO_0006954 denotes inflammation
T119 8028-8049 http://purl.obolibrary.org/obo/GO_0006954 denotes inflammatory response
T120 8933-8948 http://purl.obolibrary.org/obo/GO_0006955 denotes immune response

MyTest

Id Subject Object Predicate Lexical cue
32655581-28466096-34771706 202-204 28466096 denotes 19
32655581-16043521-34771707 206-209 16043521 denotes 141
32655581-28466096-34771708 468-470 28466096 denotes 19
32655581-32056249-34771709 472-474 32056249 denotes 29
32655581-32056249-34771710 577-579 32056249 denotes 29
32655581-15602737-34771711 818-821 15602737 denotes 138
32655581-19906920-34771712 1271-1274 19906920 denotes 120
32655581-28466096-34771713 1731-1733 28466096 denotes 19
32655581-32479746-34771714 1735-1738 32479746 denotes 142
32655581-28466096-34771715 1975-1977 28466096 denotes 19
32655581-32398875-34771716 2367-2370 32398875 denotes 128
32655581-19906920-34771717 2855-2858 19906920 denotes 120
32655581-28466096-34771718 3135-3137 28466096 denotes 19
32655581-32056249-34771719 3139-3141 32056249 denotes 29
32655581-15860669-34771720 3143-3146 15860669 denotes 143
32655581-16501078-34771720 3143-3146 16501078 denotes 143
32655581-19906920-34771720 3143-3146 19906920 denotes 143
32655581-15602737-34771721 3330-3333 15602737 denotes 138
32655581-15602737-34771722 3517-3520 15602737 denotes 138
32655581-15602737-34771723 3912-3915 15602737 denotes 138
32655581-19635508-34771724 4007-4010 19635508 denotes 146
32655581-32405233-34771725 4891-4894 32405233 denotes 148
32655581-27670241-34771726 5028-5030 27670241 denotes 83
32655581-31156653-34771727 5204-5205 31156653 denotes 8
32655581-32479746-34771728 5447-5450 32479746 denotes 142
32655581-28466096-34771729 5669-5671 28466096 denotes 19
32655581-21629707-34771730 8098-8101 21629707 denotes 149
32655581-23236375-34771730 8098-8101 23236375 denotes 149
32655581-23072664-34771730 8098-8101 23072664 denotes 149
32655581-29064085-34771730 8098-8101 29064085 denotes 149
32655581-27012512-34771731 8881-8883 27012512 denotes 14
32655581-27743750-34771732 8885-8888 27743750 denotes 153

TEST0

Id Subject Object Predicate Lexical cue
32655581-158-164-3171279 202-204 ["28466096"] denotes 19
32655581-162-169-3171280 206-209 ["16043521"] denotes 141
32655581-234-240-3171281 468-470 ["28466096"] denotes 19
32655581-235-241-3171282 472-474 ["32056249"] denotes 29
32655581-100-106-3171283 577-579 ["32056249"] denotes 29
32655581-104-111-3171284 818-821 ["15602737"] denotes 138
32655581-235-242-3171285 1271-1274 ["19906920"] denotes 120
32655581-234-240-3171286 1731-1733 ["28466096"] denotes 19
32655581-228-235-3171287 1735-1738 ["32479746"] denotes 142
32655581-234-240-3171288 1975-1977 ["28466096"] denotes 19
32655581-236-243-3171289 2367-2370 ["32398875"] denotes 128
32655581-228-235-3171290 2855-2858 ["19906920"] denotes 120
32655581-231-237-3171291 3135-3137 ["28466096"] denotes 19
32655581-235-241-3171292 3139-3141 ["32056249"] denotes 29
32655581-234-241-3171293 3143-3146 ["15860669", "16501078", "19906920"] denotes 143
32655581-177-184-3171294 3330-3333 ["15602737"] denotes 138
32655581-181-188-3171295 3517-3520 ["15602737"] denotes 138
32655581-222-229-3171296 3912-3915 ["15602737"] denotes 138
32655581-89-96-3171297 4007-4010 ["19635508"] denotes 146
32655581-224-231-3171298 4891-4894 ["32405233"] denotes 148
32655581-131-137-3171299 5028-5030 ["27670241"] denotes 83
32655581-171-176-3171300 5204-5205 ["31156653"] denotes 8
32655581-236-243-3171301 5447-5450 ["32479746"] denotes 142
32655581-216-222-3171302 5669-5671 ["28466096"] denotes 19
32655581-236-243-3171303 8098-8101 ["21629707", "23236375", "23072664", "29064085"] denotes 149
32655581-144-150-3171304 8881-8883 ["27012512"] denotes 14
32655581-148-155-3171305 8885-8888 ["27743750"] denotes 153

2_test

Id Subject Object Predicate Lexical cue
32655581-28466096-34771706 202-204 28466096 denotes 19
32655581-16043521-34771707 206-209 16043521 denotes 141
32655581-28466096-34771708 468-470 28466096 denotes 19
32655581-32056249-34771709 472-474 32056249 denotes 29
32655581-32056249-34771710 577-579 32056249 denotes 29
32655581-15602737-34771711 818-821 15602737 denotes 138
32655581-19906920-34771712 1271-1274 19906920 denotes 120
32655581-28466096-34771713 1731-1733 28466096 denotes 19
32655581-32479746-34771714 1735-1738 32479746 denotes 142
32655581-28466096-34771715 1975-1977 28466096 denotes 19
32655581-32398875-34771716 2367-2370 32398875 denotes 128
32655581-19906920-34771717 2855-2858 19906920 denotes 120
32655581-28466096-34771718 3135-3137 28466096 denotes 19
32655581-32056249-34771719 3139-3141 32056249 denotes 29
32655581-15860669-34771720 3143-3146 15860669 denotes 143
32655581-16501078-34771720 3143-3146 16501078 denotes 143
32655581-19906920-34771720 3143-3146 19906920 denotes 143
32655581-15602737-34771721 3330-3333 15602737 denotes 138
32655581-15602737-34771722 3517-3520 15602737 denotes 138
32655581-15602737-34771723 3912-3915 15602737 denotes 138
32655581-19635508-34771724 4007-4010 19635508 denotes 146
32655581-32405233-34771725 4891-4894 32405233 denotes 148
32655581-27670241-34771726 5028-5030 27670241 denotes 83
32655581-31156653-34771727 5204-5205 31156653 denotes 8
32655581-32479746-34771728 5447-5450 32479746 denotes 142
32655581-28466096-34771729 5669-5671 28466096 denotes 19
32655581-21629707-34771730 8098-8101 21629707 denotes 149
32655581-23236375-34771730 8098-8101 23236375 denotes 149
32655581-23072664-34771730 8098-8101 23072664 denotes 149
32655581-29064085-34771730 8098-8101 29064085 denotes 149
32655581-27012512-34771731 8881-8883 27012512 denotes 14
32655581-27743750-34771732 8885-8888 27743750 denotes 153

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T160 0-43 Sentence denotes NK Cell Role in Coronavirus Immunopathology
T161 44-211 Sentence denotes In the context of CoVs, the significant morbidity and mortality associated with severe disease is due to acute lung injury (ALI) and the development of ARDS (19, 141).
T162 212-476 Sentence denotes Pathological analysis of tissues obtained from SARS and MERS patients showed edematous lungs with areas of consolidation, bronchial epithelial denudation, loss of cilia, squamous metaplasia, pneumocyte hyperplasia, and bronchial submucosal gland necrosis (19, 29).
T163 477-581 Sentence denotes Histological features include diffuse alveolar damage and acute fibrinous and organizing pneumonia (29).
T164 582-713 Sentence denotes A heightened inflammatory response in the lungs resulting in tissue damage has been hypothesized to explain the development of ALI.
T165 714-823 Sentence denotes There are several key factors that may be responsible for the induction of this dangerous inflammation (138).
T166 824-1030 Sentence denotes Both SARS-CoV-1 and MERS-CoV replicate to high titers early in infection, which could lead to enhanced cytopathic effects and increased production of pro-inflammatory cytokines/chemokines by infected cells.
T167 1031-1276 Sentence denotes Chen et al. developed a pneumonia model where pulmonary replication of SARS-CoV-1 was associated with histopathological evidence of disease, including bronchiolitis, interstitial pneumonitis, diffuse alveolar damage, and fibrotic scarring (120).
T168 1277-1740 Sentence denotes They identified a biphasic cellular immune response in which cytokines (TNF-α and IL-6) and chemokines [interferon gamma-induced protein (IP)-10, monocyte chemoattractant protein (MCP)-1, macrophage inflammatory protein (MIP)-1a, RANTES] were produced early, likely by infected airway epithelial cells, alveolar macrophages, and recruited inflammatory monocyte-macrophages and neutrophils, which have been shown to replace resident alveolar macrophages (19, 142).
T169 1741-1979 Sentence denotes SARS-CoV-1 and MERS-CoV encode structural and non-structural proteins that antagonize the interferon response, which may initially delay the innate immune response but eventually potentiate inflammatory monocyte-macrophage responses (19).
T170 1980-2130 Sentence denotes In COVID-19 patients, Liao et al. reported increased lung infiltration by macrophages identified via RNA-seq analysis of bronchoalveolar lavage fluid.
T171 2131-2372 Sentence denotes Patients with mild cases exhibited infiltration by alveolar macrophages [Fatty Acid Binding Protein (FABP)4+] while patients with severe ARDS exhibited infiltration by highly inflammatory [Ficolin (FCN1)+] monocyte-derived macrophages (128).
T172 2373-2573 Sentence denotes In the SARS-CoV-1 pneumonia model, the first wave of cytokines and chemokines induced an accumulation of NK cells, as well as plasmacytoid (p)DCs, macrophages, CD4+ T cells and NKT cells in the lungs.
T173 2574-2860 Sentence denotes A second wave of inflammatory mediators was detected later on day 7 post-infection [cytokines TNF-α, IL-6, IFN-γ, IL-2, IL-5, and chemokines MCP-1, MIP-1a, RANTES, monokine induced by gamma interferon (MIG), IP-10] and correlated with lung infiltration of T cells and neutrophils (120).
T174 2861-3152 Sentence denotes These findings are consistent with studies that have shown increased levels of activating and inhibitory cytokines and chemokines in the blood and lungs of SARS patients, as well as histological studies of SARS and MERS-infected lungs which show extensive cell infiltrates (19, 29, 143–145).
T175 3153-3335 Sentence denotes When Huang et al. investigated the cytokine/chemokine profile in the acute phase of SARS infection in a cohort of Taiwanese patients, they observed an IFN-γ-led cytokine storm (138).
T176 3336-3575 Sentence denotes They assessed sera from hospitalized patients prior to the administration of immunomodulators and found significantly increased levels of IFN-γ, IL-18, IP-10, MCP-1, MIG, and IL-8 (138), which returned to basal levels in convalescent sera.
T177 3576-3674 Sentence denotes IP-10, MIG, MCP-1, and IL-18 levels were all significantly increased in death vs. survival groups.
T178 3675-3917 Sentence denotes Interestingly, they found an inverse relationship between IFN-γ levels and lymphocyte numbers and suggested this could either be due to IFN-γ-induced lymphocyte apoptosis or sequestration of chemokine-recruited lymphocytes in the lungs (138).
T179 3918-4012 Sentence denotes Indeed, this hyper-cytokinemia has been consistently observed in SARS-infected patients (146).
T180 4013-4276 Sentence denotes However, a recent study found that levels of six pro-inflammatory cytokines (IL-1b, IL-1Ra, IL-6, IL-8, IL-18, and TNF-α) implicated in the cytokine storm in COVID-19 patients did not differ significantly from levels in cytokine storms caused by other conditions.
T181 4277-4569 Sentence denotes They suggest that it is therefore possible that increased levels of pro-inflammatory cytokines in the context of severe COVID-19 may simply reflect an increased viral burden rather than an exuberant immune response and suggest that immunotherapies should therefore be used with caution (147).
T182 4570-4896 Sentence denotes Altogether these studies show that during acute CoV infection, inflammatory monocyte-macrophages and neutrophils accumulate in the lungs and produce cytokines and chemokines that induce the activation and migration of lymphocytes, including NK cells, to the lungs, where they could be one of the main producers of IFN-γ (148).
T183 4897-5032 Sentence denotes Under normal conditions, human lung NK cells are typically hyporesponsive but dynamically migrate in and out of pulmonary tissues (83).
T184 5033-5207 Sentence denotes This supports the hypothesis that during infectious respiratory diseases, an increased recruitment of hyperresponsive NK cells would worsen the festering immunopathology (8).
T185 5208-5452 Sentence denotes In fact, through Viral-Track scanning of unmapped single-cell RNA-sequencing data, Bost et al. showed that patients with severe COVID-19 exhibited a hyperinflammatory response with an enriched and highly proliferative NK cell compartment (142).
T186 5453-5731 Sentence denotes High levels of IFN-γ leads to epithelial and endothelial cell apoptosis and vascular leakage, suboptimal T cell response, accumulation of alternatively activated macrophages and altered tissue homeostasis, and ARDS (19), all of which may contribute to COVID-19 disease severity.
T187 5732-5997 Sentence denotes In summary, the evidence is consistent with the hypothesis that NK cells are involved in the cytokine storm associated with CoV infection and that this hyper-cytokinemia contributes significantly to disease severity via inflammation-mediated lung damage (Figure 1).
T188 5998-6323 Sentence denotes Figure 1 Hypothesized dual role of NK cells during coronavirus pathogenesis. (A) Healthy Natural Killer (NK) cells in low-risk individuals recognize SARS-CoV-2 infected cells via recognition of viral proteins on the surface of infected cells and through sensing of cytokines and chemokines produced in response to infection.
T189 6324-6651 Sentence denotes These cells are hypothesized to be able to directly induce apoptosis through death receptor ligation, antibody-dependent cell-mediated cytotoxicity (ADCC), and through the release of cytotoxic granules, in addition to indirectly targeting virally infected cells via modulation of the immune response through cytokine secretion.
T190 6652-6944 Sentence denotes An effective innate immune response may be able to clear SARS-CoV-2 infection and leave the patient's lungs undamaged. (B) High risk individuals may have dysfunctional NK cells which may not recognize and respond to SARS-CoV-2 infection due to immune evasion strategies employed by the virus.
T191 6945-7180 Sentence denotes It is hypothesized that an accumulation of infected epithelial cells and innate immune cells, monocyte-macrophages and neutrophils, release cytokines, and chemokines which further recruit immune cells, including NK cells, to the lungs.
T192 7181-7248 Sentence denotes This may result in the induction of a cytokine storm, led by IFN-γ.
T193 7249-7476 Sentence denotes This inflammatory state could act as the catalyst for the development of acute lung injury (ALI) and acute respiratory distress syndrome (ARDS), contributing to the significant morbidity, and mortality associated with COVID-19.
T194 7477-7635 Sentence denotes SARS-CoV-2 infection is associated with reduced NK cell levels and an exhausted phenotype which may impede viral clearance, in addition to severe lung damage.
T195 7636-7741 Sentence denotes Interestingly, this duality of NK cell roles mirrors what is seen in critically ill patients with sepsis.
T196 7742-8107 Sentence denotes Studies suggest that while early NK cell stimulation and IFN-γ production is beneficial to combat infections, excessive and prolonged stimulation of NK cells leads to reduced NK cell numbers and an exhausted phenotype and was associated with increased systemic inflammation in systemic inflammatory response syndrome (SIRS)/sepsis and increased mortality (149–152).
T197 8108-8230 Sentence denotes This review of the literature suggests that NK cells may play an important role in both CoV clearance and immunopathology.
T198 8231-8391 Sentence denotes The continued probing of NK cell involvement is essential for a more complete understanding of CoV pathophysiology and for the deployment of immunotherapeutics.
T199 8392-8736 Sentence denotes Depending on the patient, the stage of disease, and other still poorly understood factors, it may be necessary to either boost NK cell activity to ensure viral clearance, e.g., at exposure or during early infection, or to finely tune NK cell effector functions in late stage infections to prevent hyper-cytokinemia and inflammatory lung damage.
T200 8737-8890 Sentence denotes Indeed, all CoVs that infect humans are zoonoses and there is an extensive reservoir of CoVs that could serve as a source for future pandemics (14, 153).
T201 8891-9122 Sentence denotes Therefore, a broader understanding of the immune response to coronaviruses and insights into therapeutic implications will be of significant value not only for the current COVID-19 pandemic, but also for potential future pandemics.