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PMC:7324763 / 13884-15993 JSONTXT

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LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T300 80-88 SP_7 denotes COVID-19
T301 147-152 NCBITaxon:10239 denotes viral
T302 171-176 NCBITaxon:10088 denotes Mouse
T303 259-266 NCBITaxon:33208 denotes animals
T304 311-316 NCBITaxon:10239 denotes viral
T305 346-352 NCBITaxon:9606 denotes humans
T306 375-377 CL:0000540 denotes NK
T307 418-423 GO:0007568 denotes aging
T308 425-427 CL:0000540 denotes NK
T309 514-521 CL:0000623 denotes NK cell
T310 925-933 SP_7 denotes COVID-19
T311 1004-1012 SP_7 denotes COVID-19
T312 1024-1030 NCBITaxon:9606 denotes people
T313 1056-1067 NCBITaxon:1 denotes individuals
T314 1133-1138 NCBITaxon:10239 denotes viral
T315 1242-1250 SP_7 denotes COVID-19
T316 1260-1271 NCBITaxon:1 denotes individuals
T317 1276-1287 NCBITaxon:1 denotes individuals
T318 1476-1484 SP_7 denotes COVID-19
T319 1576-1584 SP_7 denotes COVID-19
T320 1618-1624 UBERON:0002405;GO:0006955 denotes immune
T321 1625-1635 GO:0042110 denotes activation
T322 1692-1703 NCBITaxon:1 denotes individuals
T323 1739-1745 UBERON:0002405;GO:0006955 denotes immune
T324 1746-1754 GO:0006955 denotes response
T325 1758-1766 SP_7 denotes COVID-19
T43138 80-88 SP_7 denotes COVID-19
T57178 147-152 NCBITaxon:10239 denotes viral
T48626 171-176 NCBITaxon:10088 denotes Mouse
T15313 259-266 NCBITaxon:33208 denotes animals
T32630 311-316 NCBITaxon:10239 denotes viral
T22448 346-352 NCBITaxon:9606 denotes humans
T35331 375-377 CL:0000540 denotes NK
T30258 418-423 GO:0007568 denotes aging
T93463 425-427 CL:0000540 denotes NK
T62007 514-521 CL:0000623 denotes NK cell
T28081 925-933 SP_7 denotes COVID-19
T2558 1004-1012 SP_7 denotes COVID-19
T5341 1024-1030 NCBITaxon:9606 denotes people
T36303 1056-1067 NCBITaxon:1 denotes individuals
T57796 1133-1138 NCBITaxon:10239 denotes viral
T45355 1242-1250 SP_7 denotes COVID-19
T18748 1260-1271 NCBITaxon:1 denotes individuals
T33518 1276-1287 NCBITaxon:1 denotes individuals
T36250 1476-1484 SP_7 denotes COVID-19
T58758 1576-1584 SP_7 denotes COVID-19
T10676 1618-1624 UBERON:0002405;GO:0006955 denotes immune
T56639 1625-1635 GO:0042110 denotes activation
T55366 1692-1703 NCBITaxon:1 denotes individuals
T59783 1739-1745 UBERON:0002405;GO:0006955 denotes immune
T97290 1746-1754 GO:0006955 denotes response
T76450 1758-1766 SP_7 denotes COVID-19

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T167 242-250 Body_part denotes NK cells http://purl.org/sig/ont/fma/fma63147
T168 245-250 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T169 375-382 Body_part denotes NK cell http://purl.org/sig/ont/fma/fma63147
T170 378-382 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T171 425-432 Body_part denotes NK cell http://purl.org/sig/ont/fma/fma63147
T172 428-432 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T173 514-521 Body_part denotes NK cell http://purl.org/sig/ont/fma/fma63147
T174 517-521 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T175 698-705 Body_part denotes NK cell http://purl.org/sig/ont/fma/fma63147
T176 701-705 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T177 859-866 Body_part denotes NK cell http://purl.org/sig/ont/fma/fma63147
T178 862-866 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T179 1081-1088 Body_part denotes NK cell http://purl.org/sig/ont/fma/fma63147
T180 1084-1088 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T181 1966-1973 Body_part denotes NK cell http://purl.org/sig/ont/fma/fma63147
T182 1969-1973 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T183 2071-2078 Body_part denotes NK cell http://purl.org/sig/ont/fma/fma63147
T184 2074-2078 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T104 16-22 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T105 80-88 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T106 147-163 Disease denotes viral infections http://purl.obolibrary.org/obo/MONDO_0005108
T107 311-327 Disease denotes viral infections http://purl.obolibrary.org/obo/MONDO_0005108
T108 555-564 Disease denotes influenza http://purl.obolibrary.org/obo/MONDO_0005812
T109 811-818 Disease denotes obesity http://purl.obolibrary.org/obo/MONDO_0011122
T110 925-933 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T111 1004-1012 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T112 1133-1149 Disease denotes viral infections http://purl.obolibrary.org/obo/MONDO_0005108
T113 1216-1225 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T114 1242-1250 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T115 1315-1322 Disease denotes obesity http://purl.obolibrary.org/obo/MONDO_0011122
T116 1327-1333 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T117 1427-1445 Disease denotes immunodeficiencies http://purl.obolibrary.org/obo/MONDO_0021094
T118 1476-1484 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T119 1576-1584 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T120 1758-1766 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T206 39-40 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T207 171-176 http://purl.obolibrary.org/obo/CLO_0007836 denotes Mouse
T208 201-202 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T209 242-250 http://purl.obolibrary.org/obo/CL_0000623 denotes NK cells
T210 259-266 http://purl.obolibrary.org/obo/NCBITaxon_33208 denotes animals
T211 346-352 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T212 375-382 http://purl.obolibrary.org/obo/CL_0000623 denotes NK cell
T213 425-432 http://purl.obolibrary.org/obo/CL_0000623 denotes NK cell
T214 433-441 http://purl.obolibrary.org/obo/CLO_0001658 denotes activity
T215 514-521 http://purl.obolibrary.org/obo/CL_0000623 denotes NK cell
T216 698-705 http://purl.obolibrary.org/obo/CL_0000623 denotes NK cell
T217 826-829 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T218 859-866 http://purl.obolibrary.org/obo/CL_0000623 denotes NK cell
T219 891-894 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T220 1081-1088 http://purl.obolibrary.org/obo/CL_0000623 denotes NK cell
T221 1171-1174 http://purl.obolibrary.org/obo/CL_0000990 denotes CDC
T222 1175-1178 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T223 1199-1200 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T224 1335-1338 http://purl.obolibrary.org/obo/CLO_0053001 denotes 114
T225 1387-1388 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T226 1560-1561 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T227 1625-1635 http://purl.obolibrary.org/obo/CLO_0001658 denotes activation
T228 1789-1798 http://www.ebi.ac.uk/efo/EFO_0000876 denotes extremely
T229 1966-1973 http://purl.obolibrary.org/obo/CL_0000623 denotes NK cell
T230 1974-1982 http://purl.obolibrary.org/obo/CLO_0001658 denotes activity
T231 2071-2078 http://purl.obolibrary.org/obo/CL_0000623 denotes NK cell

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
424 23-31 Species denotes patients Tax:9606
425 109-117 Species denotes patients Tax:9606
426 171-176 Species denotes Mouse Tax:10090
427 346-352 Species denotes humans Tax:9606
428 1024-1030 Species denotes people Tax:9606
429 1767-1775 Species denotes patients Tax:9606
430 555-564 Species denotes influenza Tax:11320
431 16-22 Disease denotes cancer MESH:D009369
432 80-88 Disease denotes COVID-19 MESH:C000657245
433 147-163 Disease denotes viral infections MESH:D001102
434 317-327 Disease denotes infections MESH:D007239
435 477-493 Disease denotes Przemska-Kosicka
436 811-818 Disease denotes obesity MESH:D009765
437 859-878 Disease denotes NK cell dysfunction MESH:D054066
438 925-933 Disease denotes COVID-19 MESH:C000657245
439 1004-1012 Disease denotes COVID-19 MESH:C000657245
440 1048-1051 Disease denotes NKD
441 1133-1149 Disease denotes viral infections MESH:D001102
442 1216-1225 Disease denotes infection MESH:D007239
443 1242-1250 Disease denotes COVID-19 MESH:C000657245
444 1315-1322 Disease denotes obesity MESH:D009765
445 1327-1333 Disease denotes cancer MESH:D009369
446 1419-1445 Disease denotes primary immunodeficiencies MESH:D000081207
447 1476-1484 Disease denotes COVID-19 MESH:C000657245
448 1576-1584 Disease denotes COVID-19 MESH:C000657245
449 1758-1766 Disease denotes COVID-19 MESH:C000657245

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T23 16-22 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664
T24 811-818 Phenotype denotes obesity http://purl.obolibrary.org/obo/HP_0001513
T25 1073-1096 Phenotype denotes reduced NK cell numbers http://purl.obolibrary.org/obo/HP_0040218
T26 1315-1322 Phenotype denotes obesity http://purl.obolibrary.org/obo/HP_0001513
T27 1327-1333 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664
T28 1427-1445 Phenotype denotes immunodeficiencies http://purl.obolibrary.org/obo/HP_0002721

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T40 147-163 http://purl.obolibrary.org/obo/GO_0016032 denotes viral infections
T41 311-327 http://purl.obolibrary.org/obo/GO_0016032 denotes viral infections
T42 418-423 http://purl.obolibrary.org/obo/GO_0007568 denotes aging
T43 1133-1149 http://purl.obolibrary.org/obo/GO_0016032 denotes viral infections
T44 1739-1754 http://purl.obolibrary.org/obo/GO_0006955 denotes immune response

MyTest

Id Subject Object Predicate Lexical cue
32655581-32224151-34771658 90-93 32224151 denotes 105
32655581-32066541-34771659 95-98 32066541 denotes 106
32655581-20849976-34771660 165-168 20849976 denotes 107
32655581-20876312-34771661 329-332 20876312 denotes 108
32655581-11343377-34771662 466-469 11343377 denotes 109
32655581-20233447-34771663 471-474 20233447 denotes 110
32655581-29662493-34771664 791-794 29662493 denotes 111
32655581-31018563-34771665 880-883 31018563 denotes 112
32655581-32380044-34771666 885-888 32380044 denotes 113
32655581-32380044-34771667 1032-1035 32380044 denotes 113
32655581-32335173-34771668 1495-1498 32335173 denotes 115

TEST0

Id Subject Object Predicate Lexical cue
32655581-90-97-3171231 90-93 ["32224151"] denotes 105
32655581-95-102-3171232 95-98 ["32066541"] denotes 106
32655581-64-71-3171233 165-168 ["20849976"] denotes 107
32655581-158-165-3171234 329-332 ["20876312"] denotes 108
32655581-131-138-3171235 466-469 ["11343377"] denotes 109
32655581-136-143-3171236 471-474 ["20233447"] denotes 110
32655581-236-243-3171237 791-794 ["29662493"] denotes 111
32655581-83-90-3171238 880-883 ["31018563"] denotes 112
32655581-88-95-3171239 885-888 ["32380044"] denotes 113
32655581-235-242-3171240 1032-1035 ["32380044"] denotes 113
32655581-154-161-3171241 1495-1498 ["32335173"] denotes 115

2_test

Id Subject Object Predicate Lexical cue
32655581-32224151-34771658 90-93 32224151 denotes 105
32655581-32066541-34771659 95-98 32066541 denotes 106
32655581-20849976-34771660 165-168 20849976 denotes 107
32655581-20876312-34771661 329-332 20876312 denotes 108
32655581-11343377-34771662 466-469 11343377 denotes 109
32655581-20233447-34771663 471-474 20233447 denotes 110
32655581-29662493-34771664 791-794 29662493 denotes 111
32655581-31018563-34771665 880-883 31018563 denotes 112
32655581-32380044-34771666 885-888 32380044 denotes 113
32655581-32380044-34771667 1032-1035 32380044 denotes 113
32655581-32335173-34771668 1495-1498 32335173 denotes 115

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T86 0-100 Sentence denotes Unsurprisingly, cancer patients are at a significantly increased risk of severe COVID-19 (105, 106).
T87 101-170 Sentence denotes Elderly patients are also more susceptible to viral infections (107).
T88 171-334 Sentence denotes Mouse studies highlighted how a decreased number of circulating mature NK cells in aged animals paralleled with increased susceptibility to viral infections (108).
T89 335-476 Sentence denotes Studies in humans suggest that although NK cell numbers can actually increase with aging, NK cell activity declines significantly (109, 110).
T90 477-796 Sentence denotes Przemska-Kosicka et al. investigated NK cell function in response to seasonal influenza vaccination in young and old populations and observed quantitative and qualitative changes associated with impaired responses in the NK cell population and this was associated with poor seroconversion in the older population (111).
T91 797-1037 Sentence denotes Additionally, obesity, which has been shown to cause systemic NK cell dysfunction (112, 113), has also been linked to increased COVID-19 severity and could be the reason behind the high prevalence of severe COVID-19 in younger people (113).
T92 1038-1150 Sentence denotes In short, NKD and individuals with reduced NK cell numbers or function are more susceptible to viral infections.
T93 1151-1340 Sentence denotes Unsurprisingly, the CDC has already highlighted a higher risk of infection and severity of COVID-19 in older individuals and individuals with comorbidities such as obesity and cancer (114).
T94 1341-1704 Sentence denotes However, this point is still controversial as a systematic review showed that primary immunodeficiencies are not linked with increased COVID-19 severity (115), but these data have to be interpreted keeping in mind that a large part of COVID-19 pathology is caused by excessive immune activation, which is arguably harder to reach in immunocompromised individuals.
T95 1705-1915 Sentence denotes Given the paradoxical role of the immune response in COVID-19 patients, it would be extremely useful to be able to rely on immunological functional biomarkers that could predict the outcome of disease severity.
T96 1916-2109 Sentence denotes Such assays are readily available for determining NK cell activity, e.g., NKVue™, and there is therefore an opportunity to conduct studies that would link NK cell functions to disease severity.