PMC:7323532 / 5152-5555 JSONTXT

{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T64","span":{"begin":23,"end":31},"obj":"Disease"},{"id":"T65","span":{"begin":34,"end":43},"obj":"Disease"},{"id":"T66","span":{"begin":164,"end":177},"obj":"Disease"},{"id":"T67","span":{"begin":343,"end":365},"obj":"Disease"},{"id":"T68","span":{"begin":352,"end":365},"obj":"Disease"},{"id":"T69","span":{"begin":394,"end":402},"obj":"Disease"}],"attributes":[{"id":"A64","pred":"mondo_id","subj":"T64","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A65","pred":"mondo_id","subj":"T65","obj":"http://purl.obolibrary.org/obo/MONDO_0005550"},{"id":"A66","pred":"mondo_id","subj":"T66","obj":"http://purl.obolibrary.org/obo/MONDO_0005657"},{"id":"A67","pred":"mondo_id","subj":"T67","obj":"http://purl.obolibrary.org/obo/MONDO_0000240"},{"id":"A68","pred":"mondo_id","subj":"T68","obj":"http://purl.obolibrary.org/obo/MONDO_0005657"},{"id":"A69","pred":"mondo_id","subj":"T69","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"}],"text":"A patient with a fatal SARS-CoV-2 infection recently was reported to have A. flavus on tracheal aspirates culture, but other evidence was missing, and diagnosis of aspergillosis was not substantiated (10). Additional assessments are urgently needed to thoroughly investigate cases and promptly establish and define the cumulative incidence of invasive aspergillosis in ICU patients with severe COVID-19."}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T35","span":{"begin":0,"end":1},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T36","span":{"begin":15,"end":16},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T37","span":{"begin":74,"end":75},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"}],"text":"A patient with a fatal SARS-CoV-2 infection recently was reported to have A. flavus on tracheal aspirates culture, but other evidence was missing, and diagnosis of aspergillosis was not substantiated (10). Additional assessments are urgently needed to thoroughly investigate cases and promptly establish and define the cumulative incidence of invasive aspergillosis in ICU patients with severe COVID-19."}

{"project":"LitCovid-PubTator","denotations":[{"id":"191","span":{"begin":2,"end":9},"obj":"Species"},{"id":"192","span":{"begin":74,"end":83},"obj":"Species"},{"id":"193","span":{"begin":373,"end":381},"obj":"Species"},{"id":"194","span":{"begin":23,"end":43},"obj":"Disease"},{"id":"195","span":{"begin":164,"end":177},"obj":"Disease"},{"id":"196","span":{"begin":343,"end":365},"obj":"Disease"},{"id":"197","span":{"begin":394,"end":402},"obj":"Disease"}],"attributes":[{"id":"A191","pred":"tao:has_database_id","subj":"191","obj":"Tax:9606"},{"id":"A192","pred":"tao:has_database_id","subj":"192","obj":"Tax:5059"},{"id":"A193","pred":"tao:has_database_id","subj":"193","obj":"Tax:9606"},{"id":"A194","pred":"tao:has_database_id","subj":"194","obj":"MESH:C000657245"},{"id":"A195","pred":"tao:has_database_id","subj":"195","obj":"MESH:D001228"},{"id":"A196","pred":"tao:has_database_id","subj":"196","obj":"MESH:D055744"},{"id":"A197","pred":"tao:has_database_id","subj":"197","obj":"MESH:C000657245"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"A patient with a fatal SARS-CoV-2 infection recently was reported to have A. flavus on tracheal aspirates culture, but other evidence was missing, and diagnosis of aspergillosis was not substantiated (10). Additional assessments are urgently needed to thoroughly investigate cases and promptly establish and define the cumulative incidence of invasive aspergillosis in ICU patients with severe COVID-19."}

{"project":"LitCovid-sentences","denotations":[{"id":"T39","span":{"begin":0,"end":205},"obj":"Sentence"},{"id":"T40","span":{"begin":206,"end":403},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"A patient with a fatal SARS-CoV-2 infection recently was reported to have A. flavus on tracheal aspirates culture, but other evidence was missing, and diagnosis of aspergillosis was not substantiated (10). Additional assessments are urgently needed to thoroughly investigate cases and promptly establish and define the cumulative incidence of invasive aspergillosis in ICU patients with severe COVID-19."}