PMC:7321036 / 77799-78600
Annnotations
LitCovid_Glycan-Motif-Structure
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T2 | 406-413 | https://glytoucan.org/Structures/Glycans/G15021LG | denotes | glucose |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T594 | 71-76 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T595 | 356-361 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T596 | 406-413 | Body_part | denotes | glucose | http://purl.org/sig/ont/fma/fma82743 |
| T597 | 422-431 | Body_part | denotes | glutamine | http://purl.org/sig/ont/fma/fma82752 |
| T598 | 453-464 | Body_part | denotes | Amino Acids | http://purl.org/sig/ont/fma/fma82739 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T331 | 36-45 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T332 | 78-86 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T333 | 319-327 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T334 | 579-587 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1089 | 0-7 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | Viruses |
| T1090 | 66-70 | http://purl.obolibrary.org/obo/CLO_0001601 | denotes | A549 |
| T1091 | 66-70 | http://purl.obolibrary.org/obo/CLO_0050025 | denotes | A549 |
| T1092 | 66-70 | http://purl.obolibrary.org/obo/CLO_0054264 | denotes | A549 |
| T1093 | 66-70 | http://purl.obolibrary.org/obo/CLO_0054265 | denotes | A549 |
| T1094 | 66-70 | http://purl.obolibrary.org/obo/CLO_0054266 | denotes | A549 |
| T1095 | 66-70 | http://purl.obolibrary.org/obo/CLO_0054267 | denotes | A549 |
| T1096 | 66-70 | http://purl.obolibrary.org/obo/CLO_0054268 | denotes | A549 |
| T1097 | 66-70 | http://purl.obolibrary.org/obo/CLO_0054269 | denotes | A549 |
| T1098 | 71-76 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T1099 | 348-361 | http://purl.obolibrary.org/obo/CLO_0051719 | denotes | Vero E6 cells |
| T1100 | 611-614 | http://purl.obolibrary.org/obo/CL_0000990 | denotes | CDC |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T56206 | 112-114 | Chemical | denotes | NR | http://purl.obolibrary.org/obo/CHEBI_145751 |
| T90504 | 404-413 | Chemical | denotes | D-glucose | http://purl.obolibrary.org/obo/CHEBI_17634|http://purl.obolibrary.org/obo/CHEBI_4167|http://purl.obolibrary.org/obo/CHEBI_42758 |
| T18276 | 406-413 | Chemical | denotes | glucose | http://purl.obolibrary.org/obo/CHEBI_17234 |
| T24858 | 420-431 | Chemical | denotes | L-glutamine | http://purl.obolibrary.org/obo/CHEBI_18050|http://purl.obolibrary.org/obo/CHEBI_30011|http://purl.obolibrary.org/obo/CHEBI_58359 |
| T63958 | 422-431 | Chemical | denotes | glutamine | http://purl.obolibrary.org/obo/CHEBI_28300 |
| T28837 | 497-502 | Chemical | denotes | HEPES | http://purl.obolibrary.org/obo/CHEBI_46756 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 1737 | 61-65 | Gene | denotes | ACE2 | Gene:59272 |
| 1738 | 78-88 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 1739 | 171-178 | Species | denotes | BetaCoV | Tax:694002 |
| 1740 | 319-329 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 1741 | 579-589 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 1742 | 365-369 | Chemical | denotes | DMEM | |
| 1743 | 406-413 | Chemical | denotes | glucose | MESH:D005947 |
| 1744 | 420-431 | Chemical | denotes | L-glutamine | MESH:D005973 |
| 1745 | 471-486 | Chemical | denotes | Sodium Pyruvate | |
| 1746 | 497-502 | Chemical | denotes | HEPES | MESH:D006531 |
| 1747 | 36-45 | Disease | denotes | infection | MESH:D007239 |
| 1748 | 66-70 | CellLine | denotes | A549 | CVCL:0023 |
| 1749 | 353-355 | CellLine | denotes | E6 | CVCL:4582 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T711 | 0-31 | Sentence | denotes | Viruses (Mount Sinai, New York) |
| T712 | 32-318 | Sentence | denotes | For infection experiments in ACE2-A549 cells, SARS-CoV-2, isolate USA-WA1/2020 (NR-52281), which shares 99.983% sequence identity with the BetaCoV/France/IDF0372/2020 isolate, was deposited by the Center for Disease Control and Prevention and obtained through BEI Resources, NIAID, NIH. |
| T713 | 319-554 | Sentence | denotes | SARS-CoV-2 was propagated in Vero E6 cells in DMEM supplemented with 2% FBS, 4.5 g/L D-glucose, 4 mM L-glutamine, 10 mM Non-Essential Amino Acids, 1 mM Sodium Pyruvate and 10 mM HEPES as described previously (Blanco-Melo et al., 2020). |
| T714 | 555-801 | Sentence | denotes | All work involving live SARS-CoV-2 was performed in the CDC/USDA-approved BSL-3 facility of the Global Health and Emerging Pathogens Institute at the Icahn School of Medicine at Mount Sinai in accordance with institutional biosafety requirements. |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32645325-32416070-20773109 | 548-552 | 32416070 | denotes | 2020 |