PMC:7321036 / 53076-53652
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T421 | 289-292 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
| T422 | 355-360 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T423 | 475-486 | Body_part | denotes | nucleotides | http://purl.org/sig/ont/fma/fma82740 |
| T424 | 512-515 | Body_part | denotes | DNA | http://purl.org/sig/ont/fma/fma74412 |
| T425 | 535-543 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T268 | 106-114 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T269 | 117-126 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T270 | 178-188 | Disease | denotes | infectious | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T271 | 189-199 | Disease | denotes | bronchitis | http://purl.obolibrary.org/obo/MONDO_0003781 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T710 | 20-28 | http://purl.obolibrary.org/obo/CLO_0001658 | denotes | activity |
| T711 | 66-76 | http://purl.obolibrary.org/obo/CLO_0001658 | denotes | activities |
| T712 | 139-140 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T713 | 143-145 | http://purl.obolibrary.org/obo/CLO_0003414 | denotes | G2 |
| T714 | 200-205 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T715 | 213-214 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T716 | 260-262 | http://purl.obolibrary.org/obo/CLO_0001022 | denotes | Li |
| T717 | 260-262 | http://purl.obolibrary.org/obo/CLO_0007314 | denotes | Li |
| T718 | 293-300 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | viruses |
| T719 | 355-360 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T720 | 366-368 | http://purl.obolibrary.org/obo/CLO_0003414 | denotes | G2 |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T43187 | 260-262 | Chemical | denotes | Li | http://purl.obolibrary.org/obo/CHEBI_30145 |
| T41902 | 475-486 | Chemical | denotes | nucleotides | http://purl.obolibrary.org/obo/CHEBI_36976 |
| T9805 | 512-515 | Chemical | denotes | DNA | http://purl.obolibrary.org/obo/CHEBI_16991 |
| T72475 | 535-543 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T382 | 13-28 | http://purl.obolibrary.org/obo/GO_0016301 | denotes | kinase activity |
| T383 | 143-151 | http://purl.obolibrary.org/obo/GO_0051319 | denotes | G2 phase |
| T384 | 366-374 | http://purl.obolibrary.org/obo/GO_0051319 | denotes | G2 phase |
| T385 | 400-417 | http://purl.obolibrary.org/obo/GO_0019079 | denotes | viral replication |
| T386 | 400-417 | http://purl.obolibrary.org/obo/GO_0019058 | denotes | viral replication |
| T387 | 512-522 | http://purl.obolibrary.org/obo/GO_0006281 | denotes | DNA repair |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T10 | 189-199 | Phenotype | denotes | bronchitis | http://purl.obolibrary.org/obo/HP_0012387 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 1169 | 59-65 | Gene | denotes | CDK1/2 | Gene:51755 |
| 1170 | 141-142 | Gene | denotes | S | Gene:43740568 |
| 1171 | 178-205 | Species | denotes | infectious bronchitis virus | Tax:11120 |
| 1172 | 228-239 | Species | denotes | coronavirus | Tax:11118 |
| 1173 | 207-210 | Species | denotes | IBV | Tax:11120 |
| 1174 | 106-126 | Disease | denotes | SARS-CoV-2 infection | MESH:C000657245 |
| 1175 | 152-158 | Disease | denotes | arrest | MESH:D006323 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T349 | 0-344 | Sentence | denotes | In addition, kinase activity profiling analysis shows that CDK1/2 activities are significantly reduced by SARS-CoV-2 infection, leading to a S/G2 phase arrest that is similar to infectious bronchitis virus (IBV), a prototypical coronavirus (Dove et al., 2006; Li et al., 2007a), and other RNA viruses (Lilley et al., 2007; Ariumi et al., 2008). |
| T350 | 345-576 | Sentence | denotes | Arresting cells in S/G2 phase may provide benefits for viral replication and progeny production by ensuring an abundant supply of nucleotides and other essential host DNA repair/replication proteins (Chaurushiya and Weitzman 2009). |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32645325-16571830-20773084 | 254-258 | 16571830 | denotes | 2006 |
| 32645325-17275307-20773086 | 317-321 | 17275307 | denotes | 2007 |
| 32645325-18667510-20773087 | 338-342 | 18667510 | denotes | 2008 |
| 32645325-19473887-20773088 | 570-574 | 19473887 | denotes | 2009 |