PMC:7321036 / 24671-25076 JSONTXT

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T199","span":{"begin":292,"end":300},"obj":"Body_part"}],"attributes":[{"id":"A199","pred":"fma_id","subj":"T199","obj":"http://purl.org/sig/ont/fma/fma67257"}],"text":"(A) Clusters of significantly changing PHs (abs(log2FC) \u003e 1 and adjusted p \u003c 0.05) across the time course of infection with non-redundant enriched Reactome pathway terms (adjusted p value [q] \u003c 0.01) for each cluster. Horizontal red lines below each pathway term correspond to phosphorylated proteins belonging to the pathway, and a black-bordered rectangle is indicative of a significantly enriched term."}

{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T127","span":{"begin":109,"end":118},"obj":"Disease"}],"attributes":[{"id":"A127","pred":"mondo_id","subj":"T127","obj":"http://purl.obolibrary.org/obo/MONDO_0005550"}],"text":"(A) Clusters of significantly changing PHs (abs(log2FC) \u003e 1 and adjusted p \u003c 0.05) across the time course of infection with non-redundant enriched Reactome pathway terms (adjusted p value [q] \u003c 0.01) for each cluster. Horizontal red lines below each pathway term correspond to phosphorylated proteins belonging to the pathway, and a black-bordered rectangle is indicative of a significantly enriched term."}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T68282","span":{"begin":1,"end":2},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T19087","span":{"begin":331,"end":332},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T58928","span":{"begin":375,"end":376},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"}],"text":"(A) Clusters of significantly changing PHs (abs(log2FC) \u003e 1 and adjusted p \u003c 0.05) across the time course of infection with non-redundant enriched Reactome pathway terms (adjusted p value [q] \u003c 0.01) for each cluster. Horizontal red lines below each pathway term correspond to phosphorylated proteins belonging to the pathway, and a black-bordered rectangle is indicative of a significantly enriched term."}

{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T159","span":{"begin":292,"end":300},"obj":"Chemical"}],"attributes":[{"id":"A159","pred":"chebi_id","subj":"T159","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"}],"text":"(A) Clusters of significantly changing PHs (abs(log2FC) \u003e 1 and adjusted p \u003c 0.05) across the time course of infection with non-redundant enriched Reactome pathway terms (adjusted p value [q] \u003c 0.01) for each cluster. Horizontal red lines below each pathway term correspond to phosphorylated proteins belonging to the pathway, and a black-bordered rectangle is indicative of a significantly enriched term."}

{"project":"LitCovid-PubTator","denotations":[{"id":"401","span":{"begin":109,"end":118},"obj":"Disease"}],"attributes":[{"id":"A401","pred":"tao:has_database_id","subj":"401","obj":"MESH:D007239"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"(A) Clusters of significantly changing PHs (abs(log2FC) \u003e 1 and adjusted p \u003c 0.05) across the time course of infection with non-redundant enriched Reactome pathway terms (adjusted p value [q] \u003c 0.01) for each cluster. Horizontal red lines below each pathway term correspond to phosphorylated proteins belonging to the pathway, and a black-bordered rectangle is indicative of a significantly enriched term."}

{"project":"LitCovid-sentences","denotations":[{"id":"T164","span":{"begin":0,"end":217},"obj":"Sentence"},{"id":"T165","span":{"begin":218,"end":405},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"(A) Clusters of significantly changing PHs (abs(log2FC) \u003e 1 and adjusted p \u003c 0.05) across the time course of infection with non-redundant enriched Reactome pathway terms (adjusted p value [q] \u003c 0.01) for each cluster. Horizontal red lines below each pathway term correspond to phosphorylated proteins belonging to the pathway, and a black-bordered rectangle is indicative of a significantly enriched term."}