PMC:7321036 / 123584-124192 JSONTXT

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T57","span":{"begin":193,"end":200},"obj":"Body_part"}],"attributes":[{"id":"A57","pred":"fma_id","subj":"T57","obj":"http://purl.org/sig/ont/fma/fma67257"}],"text":"Table S4 Predicted Kinase Activities, Related to Figure 4\nFull results of predicted kinase activities for each time point post infection with SARS-CoV-2 (Kinase Act. Viral Infection tab) and N protein overexpression (Kinase Act. N Overexpression tab). Kinase activities are inferred as a -log10(p value) of Z-test from the comparison of fold changes in phosphosite measurements of the known substrates against the overall distribution of fold changes across the sample. Kinase activities possessing any absolute value change greater than 1.5 are indicated. Column descriptions are indicated in the final tab."}

{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T401","span":{"begin":127,"end":136},"obj":"Disease"},{"id":"T402","span":{"begin":142,"end":150},"obj":"Disease"},{"id":"T403","span":{"begin":166,"end":181},"obj":"Disease"},{"id":"T404","span":{"begin":172,"end":181},"obj":"Disease"}],"attributes":[{"id":"A401","pred":"mondo_id","subj":"T401","obj":"http://purl.obolibrary.org/obo/MONDO_0005550"},{"id":"A402","pred":"mondo_id","subj":"T402","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A403","pred":"mondo_id","subj":"T403","obj":"http://purl.obolibrary.org/obo/MONDO_0005108"},{"id":"A404","pred":"mondo_id","subj":"T404","obj":"http://purl.obolibrary.org/obo/MONDO_0005550"}],"text":"Table S4 Predicted Kinase Activities, Related to Figure 4\nFull results of predicted kinase activities for each time point post infection with SARS-CoV-2 (Kinase Act. Viral Infection tab) and N protein overexpression (Kinase Act. N Overexpression tab). Kinase activities are inferred as a -log10(p value) of Z-test from the comparison of fold changes in phosphosite measurements of the known substrates against the overall distribution of fold changes across the sample. Kinase activities possessing any absolute value change greater than 1.5 are indicated. Column descriptions are indicated in the final tab."}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T168","span":{"begin":26,"end":36},"obj":"http://purl.obolibrary.org/obo/CLO_0001658"},{"id":"T169","span":{"begin":91,"end":101},"obj":"http://purl.obolibrary.org/obo/CLO_0001658"},{"id":"T170","span":{"begin":259,"end":269},"obj":"http://purl.obolibrary.org/obo/CLO_0001658"},{"id":"T171","span":{"begin":286,"end":287},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T172","span":{"begin":309,"end":313},"obj":"http://purl.obolibrary.org/obo/UBERON_0000473"},{"id":"T173","span":{"begin":477,"end":487},"obj":"http://purl.obolibrary.org/obo/CLO_0001658"}],"text":"Table S4 Predicted Kinase Activities, Related to Figure 4\nFull results of predicted kinase activities for each time point post infection with SARS-CoV-2 (Kinase Act. Viral Infection tab) and N protein overexpression (Kinase Act. N Overexpression tab). Kinase activities are inferred as a -log10(p value) of Z-test from the comparison of fold changes in phosphosite measurements of the known substrates against the overall distribution of fold changes across the sample. Kinase activities possessing any absolute value change greater than 1.5 are indicated. Column descriptions are indicated in the final tab."}

{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T65490","span":{"begin":6,"end":8},"obj":"Chemical"},{"id":"T61100","span":{"begin":193,"end":200},"obj":"Chemical"}],"attributes":[{"id":"A46418","pred":"chebi_id","subj":"T65490","obj":"http://purl.obolibrary.org/obo/CHEBI_29401"},{"id":"A58721","pred":"chebi_id","subj":"T61100","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"}],"text":"Table S4 Predicted Kinase Activities, Related to Figure 4\nFull results of predicted kinase activities for each time point post infection with SARS-CoV-2 (Kinase Act. Viral Infection tab) and N protein overexpression (Kinase Act. N Overexpression tab). Kinase activities are inferred as a -log10(p value) of Z-test from the comparison of fold changes in phosphosite measurements of the known substrates against the overall distribution of fold changes across the sample. Kinase activities possessing any absolute value change greater than 1.5 are indicated. Column descriptions are indicated in the final tab."}

{"project":"LitCovid-PD-GO-BP","denotations":[{"id":"T48","span":{"begin":84,"end":101},"obj":"http://purl.obolibrary.org/obo/GO_0016301"},{"id":"T49","span":{"begin":166,"end":181},"obj":"http://purl.obolibrary.org/obo/GO_0016032"},{"id":"T50","span":{"begin":252,"end":269},"obj":"http://purl.obolibrary.org/obo/GO_0016301"},{"id":"T51","span":{"begin":470,"end":487},"obj":"http://purl.obolibrary.org/obo/GO_0016301"}],"text":"Table S4 Predicted Kinase Activities, Related to Figure 4\nFull results of predicted kinase activities for each time point post infection with SARS-CoV-2 (Kinase Act. Viral Infection tab) and N protein overexpression (Kinase Act. N Overexpression tab). Kinase activities are inferred as a -log10(p value) of Z-test from the comparison of fold changes in phosphosite measurements of the known substrates against the overall distribution of fold changes across the sample. Kinase activities possessing any absolute value change greater than 1.5 are indicated. Column descriptions are indicated in the final tab."}

{"project":"LitCovid-sentences","denotations":[{"id":"T982","span":{"begin":0,"end":57},"obj":"Sentence"},{"id":"T983","span":{"begin":58,"end":165},"obj":"Sentence"},{"id":"T984","span":{"begin":166,"end":228},"obj":"Sentence"},{"id":"T985","span":{"begin":229,"end":251},"obj":"Sentence"},{"id":"T986","span":{"begin":252,"end":469},"obj":"Sentence"},{"id":"T987","span":{"begin":470,"end":556},"obj":"Sentence"},{"id":"T988","span":{"begin":557,"end":608},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Table S4 Predicted Kinase Activities, Related to Figure 4\nFull results of predicted kinase activities for each time point post infection with SARS-CoV-2 (Kinase Act. Viral Infection tab) and N protein overexpression (Kinase Act. N Overexpression tab). Kinase activities are inferred as a -log10(p value) of Z-test from the comparison of fold changes in phosphosite measurements of the known substrates against the overall distribution of fold changes across the sample. Kinase activities possessing any absolute value change greater than 1.5 are indicated. Column descriptions are indicated in the final tab."}