PMC:7321036 / 122397-123031 JSONTXT

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T50","span":{"begin":100,"end":105},"obj":"Body_part"},{"id":"T51","span":{"begin":260,"end":267},"obj":"Body_part"},{"id":"T52","span":{"begin":509,"end":516},"obj":"Body_part"},{"id":"T53","span":{"begin":543,"end":548},"obj":"Body_part"}],"attributes":[{"id":"A50","pred":"fma_id","subj":"T50","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A51","pred":"fma_id","subj":"T51","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A52","pred":"fma_id","subj":"T52","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A53","pred":"fma_id","subj":"T53","obj":"http://purl.org/sig/ont/fma/fma68646"}],"text":"Table S1 Phosphorylation and Abundance Data, Related to Figure 1\nContains proteomic data of Vero E6 cells upon SARS-CoV-2 infection. Find the full list of unfiltered phosphorylation sites occurring upon SARS-CoV-2 infection (PhosphoDataFull tab), full list of protein abundance measurements (AbundanceDataFull tab), and filtered list of all detected phosphorylation sites collapsed into single-site measurements (PhosphoDataFiltered tab). Lastly, find the full list of unfiltered phosphorylation sites upon N protein overexpression in Vero E6 cells (PhosphoNOverexpressionFull tab). Column descriptions are indicated in the final tab."}

{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T395","span":{"begin":111,"end":119},"obj":"Disease"},{"id":"T396","span":{"begin":122,"end":131},"obj":"Disease"},{"id":"T397","span":{"begin":203,"end":211},"obj":"Disease"},{"id":"T398","span":{"begin":214,"end":223},"obj":"Disease"}],"attributes":[{"id":"A395","pred":"mondo_id","subj":"T395","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A396","pred":"mondo_id","subj":"T396","obj":"http://purl.obolibrary.org/obo/MONDO_0005550"},{"id":"A397","pred":"mondo_id","subj":"T397","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A398","pred":"mondo_id","subj":"T398","obj":"http://purl.obolibrary.org/obo/MONDO_0005550"}],"text":"Table S1 Phosphorylation and Abundance Data, Related to Figure 1\nContains proteomic data of Vero E6 cells upon SARS-CoV-2 infection. Find the full list of unfiltered phosphorylation sites occurring upon SARS-CoV-2 infection (PhosphoDataFull tab), full list of protein abundance measurements (AbundanceDataFull tab), and filtered list of all detected phosphorylation sites collapsed into single-site measurements (PhosphoDataFiltered tab). Lastly, find the full list of unfiltered phosphorylation sites upon N protein overexpression in Vero E6 cells (PhosphoNOverexpressionFull tab). Column descriptions are indicated in the final tab."}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T161","span":{"begin":6,"end":8},"obj":"http://purl.obolibrary.org/obo/CLO_0050050"},{"id":"T162","span":{"begin":92,"end":105},"obj":"http://purl.obolibrary.org/obo/CLO_0051719"},{"id":"T163","span":{"begin":535,"end":548},"obj":"http://purl.obolibrary.org/obo/CLO_0051719"}],"text":"Table S1 Phosphorylation and Abundance Data, Related to Figure 1\nContains proteomic data of Vero E6 cells upon SARS-CoV-2 infection. Find the full list of unfiltered phosphorylation sites occurring upon SARS-CoV-2 infection (PhosphoDataFull tab), full list of protein abundance measurements (AbundanceDataFull tab), and filtered list of all detected phosphorylation sites collapsed into single-site measurements (PhosphoDataFiltered tab). Lastly, find the full list of unfiltered phosphorylation sites upon N protein overexpression in Vero E6 cells (PhosphoNOverexpressionFull tab). Column descriptions are indicated in the final tab."}

{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T78468","span":{"begin":260,"end":267},"obj":"Chemical"},{"id":"T91318","span":{"begin":509,"end":516},"obj":"Chemical"}],"attributes":[{"id":"A77573","pred":"chebi_id","subj":"T78468","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A68877","pred":"chebi_id","subj":"T91318","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"}],"text":"Table S1 Phosphorylation and Abundance Data, Related to Figure 1\nContains proteomic data of Vero E6 cells upon SARS-CoV-2 infection. Find the full list of unfiltered phosphorylation sites occurring upon SARS-CoV-2 infection (PhosphoDataFull tab), full list of protein abundance measurements (AbundanceDataFull tab), and filtered list of all detected phosphorylation sites collapsed into single-site measurements (PhosphoDataFiltered tab). Lastly, find the full list of unfiltered phosphorylation sites upon N protein overexpression in Vero E6 cells (PhosphoNOverexpressionFull tab). Column descriptions are indicated in the final tab."}

{"project":"LitCovid-PD-GO-BP","denotations":[{"id":"T41","span":{"begin":9,"end":24},"obj":"http://purl.obolibrary.org/obo/GO_0016310"},{"id":"T42","span":{"begin":166,"end":181},"obj":"http://purl.obolibrary.org/obo/GO_0016310"},{"id":"T43","span":{"begin":350,"end":365},"obj":"http://purl.obolibrary.org/obo/GO_0016310"},{"id":"T44","span":{"begin":480,"end":495},"obj":"http://purl.obolibrary.org/obo/GO_0016310"}],"text":"Table S1 Phosphorylation and Abundance Data, Related to Figure 1\nContains proteomic data of Vero E6 cells upon SARS-CoV-2 infection. Find the full list of unfiltered phosphorylation sites occurring upon SARS-CoV-2 infection (PhosphoDataFull tab), full list of protein abundance measurements (AbundanceDataFull tab), and filtered list of all detected phosphorylation sites collapsed into single-site measurements (PhosphoDataFiltered tab). Lastly, find the full list of unfiltered phosphorylation sites upon N protein overexpression in Vero E6 cells (PhosphoNOverexpressionFull tab). Column descriptions are indicated in the final tab."}

{"project":"LitCovid-sentences","denotations":[{"id":"T972","span":{"begin":0,"end":64},"obj":"Sentence"},{"id":"T973","span":{"begin":65,"end":132},"obj":"Sentence"},{"id":"T974","span":{"begin":133,"end":438},"obj":"Sentence"},{"id":"T975","span":{"begin":439,"end":582},"obj":"Sentence"},{"id":"T976","span":{"begin":583,"end":634},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Table S1 Phosphorylation and Abundance Data, Related to Figure 1\nContains proteomic data of Vero E6 cells upon SARS-CoV-2 infection. Find the full list of unfiltered phosphorylation sites occurring upon SARS-CoV-2 infection (PhosphoDataFull tab), full list of protein abundance measurements (AbundanceDataFull tab), and filtered list of all detected phosphorylation sites collapsed into single-site measurements (PhosphoDataFiltered tab). Lastly, find the full list of unfiltered phosphorylation sites upon N protein overexpression in Vero E6 cells (PhosphoNOverexpressionFull tab). Column descriptions are indicated in the final tab."}