PMC:7321036 / 108039-108370 JSONTXT

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T33","span":{"begin":65,"end":76},"obj":"Body_part"}],"attributes":[{"id":"A33","pred":"fma_id","subj":"T33","obj":"http://purl.org/sig/ont/fma/fma82739"}],"text":"Phosphorylation sites with one-to-one mapping to human S, T or Y amino acids and showing significant change in phosphorylation (abs(log2FC) \u003e 1 and adjusted p value \u003c 0.05) in one or more conditions were selected and clustered using hierarchical clustering (complete-linkage) with pearson correlation (1-r) as the distance measure."}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T56","span":{"begin":49,"end":54},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9606"},{"id":"T57","span":{"begin":55,"end":59},"obj":"http://purl.obolibrary.org/obo/CLO_0009141"},{"id":"T58","span":{"begin":55,"end":59},"obj":"http://purl.obolibrary.org/obo/CLO_0050980"}],"text":"Phosphorylation sites with one-to-one mapping to human S, T or Y amino acids and showing significant change in phosphorylation (abs(log2FC) \u003e 1 and adjusted p value \u003c 0.05) in one or more conditions were selected and clustered using hierarchical clustering (complete-linkage) with pearson correlation (1-r) as the distance measure."}

{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T57668","span":{"begin":65,"end":76},"obj":"Chemical"},{"id":"T58962","span":{"begin":65,"end":70},"obj":"Chemical"},{"id":"T27942","span":{"begin":71,"end":76},"obj":"Chemical"}],"attributes":[{"id":"A54036","pred":"chebi_id","subj":"T57668","obj":"http://purl.obolibrary.org/obo/CHEBI_33709"},{"id":"A59701","pred":"chebi_id","subj":"T58962","obj":"http://purl.obolibrary.org/obo/CHEBI_46882"},{"id":"A27189","pred":"chebi_id","subj":"T27942","obj":"http://purl.obolibrary.org/obo/CHEBI_37527"}],"text":"Phosphorylation sites with one-to-one mapping to human S, T or Y amino acids and showing significant change in phosphorylation (abs(log2FC) \u003e 1 and adjusted p value \u003c 0.05) in one or more conditions were selected and clustered using hierarchical clustering (complete-linkage) with pearson correlation (1-r) as the distance measure."}

{"project":"LitCovid-PD-GO-BP","denotations":[{"id":"T16","span":{"begin":0,"end":15},"obj":"http://purl.obolibrary.org/obo/GO_0016310"},{"id":"T17","span":{"begin":111,"end":126},"obj":"http://purl.obolibrary.org/obo/GO_0016310"}],"text":"Phosphorylation sites with one-to-one mapping to human S, T or Y amino acids and showing significant change in phosphorylation (abs(log2FC) \u003e 1 and adjusted p value \u003c 0.05) in one or more conditions were selected and clustered using hierarchical clustering (complete-linkage) with pearson correlation (1-r) as the distance measure."}

{"project":"LitCovid-PubTator","denotations":[{"id":"2341","span":{"begin":49,"end":54},"obj":"Species"}],"attributes":[{"id":"A2341","pred":"tao:has_database_id","subj":"2341","obj":"Tax:9606"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"Phosphorylation sites with one-to-one mapping to human S, T or Y amino acids and showing significant change in phosphorylation (abs(log2FC) \u003e 1 and adjusted p value \u003c 0.05) in one or more conditions were selected and clustered using hierarchical clustering (complete-linkage) with pearson correlation (1-r) as the distance measure."}

{"project":"LitCovid-sentences","denotations":[{"id":"T927","span":{"begin":0,"end":331},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Phosphorylation sites with one-to-one mapping to human S, T or Y amino acids and showing significant change in phosphorylation (abs(log2FC) \u003e 1 and adjusted p value \u003c 0.05) in one or more conditions were selected and clustered using hierarchical clustering (complete-linkage) with pearson correlation (1-r) as the distance measure."}