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PMC:7321036 / 0-577 JSONTXT

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LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T1 40-50 SP_7 denotes SARS-CoV-2
T2 98-109 NCBITaxon:11118 denotes coronavirus
T3 124-132 SP_7 denotes COVID-19
T4 144-156 SP_7 denotes severe acute
T5 157-168 SP_7;UBERON:0001004 denotes respiratory
T6 169-191 SP_7 denotes syndrome coronavirus 2
T7 193-203 SP_7 denotes SARS-CoV-2
T8 264-270 NCBITaxon:9606 denotes people
T9 425-435 SP_7 denotes SARS-CoV-2
T10 449-453 CL_6 denotes Vero
T11 523-528 NCBITaxon:10239 denotes viral
T12 539-549 SP_7 denotes SARS-CoV-2
T19109 40-50 SP_7 denotes SARS-CoV-2
T50663 98-109 NCBITaxon:11118 denotes coronavirus
T75055 124-132 SP_7 denotes COVID-19
T31809 144-156 SP_7 denotes severe acute
T78021 157-168 SP_7;UBERON:0001004 denotes respiratory
T59836 169-191 SP_7 denotes syndrome coronavirus 2
T17117 193-203 SP_7 denotes SARS-CoV-2
T85062 264-270 NCBITaxon:9606 denotes people
T78173 425-435 SP_7 denotes SARS-CoV-2
T61255 449-453 CL_6 denotes Vero
T10677 523-528 NCBITaxon:10239 denotes viral
T47649 539-549 SP_7 denotes SARS-CoV-2

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T68056 457-462 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T14003 529-537 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T1 40-48 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T2 51-60 Disease denotes Infection http://purl.obolibrary.org/obo/MONDO_0005550
T3 98-122 Disease denotes coronavirus disease 2019 http://purl.obolibrary.org/obo/MONDO_0100096
T4 124-132 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T5 144-191 Disease denotes severe acute respiratory syndrome coronavirus 2 http://purl.obolibrary.org/obo/MONDO_0100096
T6 144-177 Disease denotes severe acute respiratory syndrome http://purl.obolibrary.org/obo/MONDO_0005091
T7 193-201 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T8 425-433 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T9 436-445 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T10 539-547 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T11 550-559 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T31254 206-209 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T63961 358-359 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T6044 449-462 http://purl.obolibrary.org/obo/CLO_0051719 denotes Vero E6 cells

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T1 321-330 Chemical denotes antiviral http://purl.obolibrary.org/obo/CHEBI_22587
T2 529-537 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T30953 11-26 http://purl.obolibrary.org/obo/GO_0016310 denotes Phosphorylation
T3721 495-510 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
1 40-60 Disease denotes SARS-CoV-2 Infection MESH:C000657245
20 144-191 Species denotes severe acute respiratory syndrome coronavirus 2 Tax:2697049
21 193-203 Species denotes SARS-CoV-2 Tax:2697049
22 264-270 Species denotes people Tax:9606
23 98-122 Disease denotes coronavirus disease 2019 MESH:C000657245
24 124-132 Disease denotes COVID-19 MESH:C000657245
25 210-218 Disease denotes infected MESH:D007239
26 425-445 Disease denotes SARS-CoV-2 infection MESH:C000657245
27 539-559 Disease denotes SARS-CoV-2 infection MESH:C000657245
31 454-456 CellLine denotes E6 CVCL:4582

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T1 0-60 Sentence denotes The Global Phosphorylation Landscape of SARS-CoV-2 Infection
T2 62-70 Sentence denotes Abstract
T3 71-341 Sentence denotes The causative agent of the coronavirus disease 2019 (COVID-19) pandemic, severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), has infected millions and killed hundreds of thousands of people worldwide, highlighting an urgent need to develop antiviral therapies.
T4 342-538 Sentence denotes Here we present a quantitative mass spectrometry-based phosphoproteomics survey of SARS-CoV-2 infection in Vero E6 cells, revealing dramatic rewiring of phosphorylation on host and viral proteins.