PMC:7318948 / 5088-5910 JSONTXT

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    LitCovid-PMC-OGER-BB

    {"project":"LitCovid-PMC-OGER-BB","denotations":[{"id":"T84","span":{"begin":264,"end":274},"obj":"CHEBI:16737;CHEBI:16737"}],"text":"Table 1 Patient labs from Day 1–10.\nLabratory Test Results 4/11/20Day 1 4/13/20day 3 4/14/20day 4 4/15/20day 5 4/16/20day 6 4/17/20day 7 4/18/20day 8 4/20/20day 10\nWBC(4.5–11 × 109/L) 6.94 6.73 12.13 8.27 8.03 8.89\nLymphocytes(30–45 %) 2.90 % 3.70 % 3.30 % 6.50 %\nCreatinine(Male: 0.70−1.30 mg/dL) 1.20 1.30 1.50 1.10 1.00 0.90 0.90\nAST(10−40 units/L) 21 25 29 34 37 25 22\nALT(10−40 units/L) 29 26 28 45 64 53 51\nAlkaline phosphatase(30−120 units/L) 81 75 72 68 63 63 72\nLDH(80–225 units/L) 226.00 344.00\nC-reactive protein (\u003c0.8 mg/dL) 3.70 1.20 0.60\nIL-6(5−15 pg/mL) 18.2 670.8 392.8 280.7\nPrograf/ Tacrolimus levels(5.0−15.0 ng/mL) 17.30 14.80 7.90\nFerritin(male: 54–755 pmol/L) 336.50 225.90\nVBG pH 7.47pO2 81pCO2 32HCO3 23.20\nABG pH 7.42pO2 72pCO2 33HCO3 21.4\nSerology\nInfluenza Negative\nCoronavirus Negative Positive"}

    LitCovid-PD-FMA-UBERON

    {"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T34","span":{"begin":215,"end":226},"obj":"Body_part"},{"id":"T35","span":{"begin":516,"end":523},"obj":"Body_part"}],"attributes":[{"id":"A34","pred":"fma_id","subj":"T34","obj":"http://purl.org/sig/ont/fma/fma62863"},{"id":"A35","pred":"fma_id","subj":"T35","obj":"http://purl.org/sig/ont/fma/fma67257"}],"text":"Table 1 Patient labs from Day 1–10.\nLabratory Test Results 4/11/20Day 1 4/13/20day 3 4/14/20day 4 4/15/20day 5 4/16/20day 6 4/17/20day 7 4/18/20day 8 4/20/20day 10\nWBC(4.5–11 × 109/L) 6.94 6.73 12.13 8.27 8.03 8.89\nLymphocytes(30–45 %) 2.90 % 3.70 % 3.30 % 6.50 %\nCreatinine(Male: 0.70−1.30 mg/dL) 1.20 1.30 1.50 1.10 1.00 0.90 0.90\nAST(10−40 units/L) 21 25 29 34 37 25 22\nALT(10−40 units/L) 29 26 28 45 64 53 51\nAlkaline phosphatase(30−120 units/L) 81 75 72 68 63 63 72\nLDH(80–225 units/L) 226.00 344.00\nC-reactive protein (\u003c0.8 mg/dL) 3.70 1.20 0.60\nIL-6(5−15 pg/mL) 18.2 670.8 392.8 280.7\nPrograf/ Tacrolimus levels(5.0−15.0 ng/mL) 17.30 14.80 7.90\nFerritin(male: 54–755 pmol/L) 336.50 225.90\nVBG pH 7.47pO2 81pCO2 32HCO3 23.20\nABG pH 7.42pO2 72pCO2 33HCO3 21.4\nSerology\nInfluenza Negative\nCoronavirus Negative Positive"}

    LitCovid-PD-MONDO

    {"project":"LitCovid-PD-MONDO","denotations":[{"id":"T34","span":{"begin":774,"end":783},"obj":"Disease"}],"attributes":[{"id":"A34","pred":"mondo_id","subj":"T34","obj":"http://purl.obolibrary.org/obo/MONDO_0005812"}],"text":"Table 1 Patient labs from Day 1–10.\nLabratory Test Results 4/11/20Day 1 4/13/20day 3 4/14/20day 4 4/15/20day 5 4/16/20day 6 4/17/20day 7 4/18/20day 8 4/20/20day 10\nWBC(4.5–11 × 109/L) 6.94 6.73 12.13 8.27 8.03 8.89\nLymphocytes(30–45 %) 2.90 % 3.70 % 3.30 % 6.50 %\nCreatinine(Male: 0.70−1.30 mg/dL) 1.20 1.30 1.50 1.10 1.00 0.90 0.90\nAST(10−40 units/L) 21 25 29 34 37 25 22\nALT(10−40 units/L) 29 26 28 45 64 53 51\nAlkaline phosphatase(30−120 units/L) 81 75 72 68 63 63 72\nLDH(80–225 units/L) 226.00 344.00\nC-reactive protein (\u003c0.8 mg/dL) 3.70 1.20 0.60\nIL-6(5−15 pg/mL) 18.2 670.8 392.8 280.7\nPrograf/ Tacrolimus levels(5.0−15.0 ng/mL) 17.30 14.80 7.90\nFerritin(male: 54–755 pmol/L) 336.50 225.90\nVBG pH 7.47pO2 81pCO2 32HCO3 23.20\nABG pH 7.42pO2 72pCO2 33HCO3 21.4\nSerology\nInfluenza Negative\nCoronavirus Negative Positive"}

    LitCovid-PD-CLO

    {"project":"LitCovid-PD-CLO","denotations":[{"id":"T65","span":{"begin":46,"end":50},"obj":"http://purl.obolibrary.org/obo/UBERON_0000473"},{"id":"T66","span":{"begin":61,"end":63},"obj":"http://purl.obolibrary.org/obo/CLO_0053733"},{"id":"T67","span":{"begin":83,"end":86},"obj":"http://purl.obolibrary.org/obo/CLO_0001302"},{"id":"T68","span":{"begin":139,"end":141},"obj":"http://purl.obolibrary.org/obo/CLO_0050510"},{"id":"T69","span":{"begin":172,"end":174},"obj":"http://purl.obolibrary.org/obo/CLO_0053733"},{"id":"T70","span":{"begin":230,"end":232},"obj":"http://purl.obolibrary.org/obo/CLO_0053799"},{"id":"T71","span":{"begin":275,"end":279},"obj":"http://purl.obolibrary.org/obo/UBERON_0003101"},{"id":"T72","span":{"begin":275,"end":279},"obj":"http://www.ebi.ac.uk/efo/EFO_0000970"},{"id":"T73","span":{"begin":361,"end":363},"obj":"http://purl.obolibrary.org/obo/CLO_0001302"},{"id":"T74","span":{"begin":370,"end":372},"obj":"http://purl.obolibrary.org/obo/CLO_0050507"},{"id":"T75","span":{"begin":401,"end":403},"obj":"http://purl.obolibrary.org/obo/CLO_0053799"},{"id":"T76","span":{"begin":413,"end":433},"obj":"http://purl.obolibrary.org/obo/PR_000023540"},{"id":"T77","span":{"begin":478,"end":481},"obj":"http://purl.obolibrary.org/obo/CLO_0001196"},{"id":"T78","span":{"begin":562,"end":564},"obj":"http://purl.obolibrary.org/obo/CLO_0008426"},{"id":"T79","span":{"begin":661,"end":665},"obj":"http://purl.obolibrary.org/obo/UBERON_0003101"},{"id":"T80","span":{"begin":661,"end":665},"obj":"http://www.ebi.ac.uk/efo/EFO_0000970"}],"text":"Table 1 Patient labs from Day 1–10.\nLabratory Test Results 4/11/20Day 1 4/13/20day 3 4/14/20day 4 4/15/20day 5 4/16/20day 6 4/17/20day 7 4/18/20day 8 4/20/20day 10\nWBC(4.5–11 × 109/L) 6.94 6.73 12.13 8.27 8.03 8.89\nLymphocytes(30–45 %) 2.90 % 3.70 % 3.30 % 6.50 %\nCreatinine(Male: 0.70−1.30 mg/dL) 1.20 1.30 1.50 1.10 1.00 0.90 0.90\nAST(10−40 units/L) 21 25 29 34 37 25 22\nALT(10−40 units/L) 29 26 28 45 64 53 51\nAlkaline phosphatase(30−120 units/L) 81 75 72 68 63 63 72\nLDH(80–225 units/L) 226.00 344.00\nC-reactive protein (\u003c0.8 mg/dL) 3.70 1.20 0.60\nIL-6(5−15 pg/mL) 18.2 670.8 392.8 280.7\nPrograf/ Tacrolimus levels(5.0−15.0 ng/mL) 17.30 14.80 7.90\nFerritin(male: 54–755 pmol/L) 336.50 225.90\nVBG pH 7.47pO2 81pCO2 32HCO3 23.20\nABG pH 7.42pO2 72pCO2 33HCO3 21.4\nSerology\nInfluenza Negative\nCoronavirus Negative Positive"}

    LitCovid-PD-CHEBI

    {"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T35","span":{"begin":264,"end":274},"obj":"Chemical"},{"id":"T36","span":{"begin":333,"end":336},"obj":"Chemical"},{"id":"T37","span":{"begin":516,"end":523},"obj":"Chemical"},{"id":"T38","span":{"begin":552,"end":554},"obj":"Chemical"},{"id":"T40","span":{"begin":592,"end":599},"obj":"Chemical"},{"id":"T42","span":{"begin":601,"end":611},"obj":"Chemical"},{"id":"T43","span":{"begin":652,"end":660},"obj":"Chemical"},{"id":"T44","span":{"begin":661,"end":665},"obj":"Chemical"}],"attributes":[{"id":"A35","pred":"chebi_id","subj":"T35","obj":"http://purl.obolibrary.org/obo/CHEBI_16737"},{"id":"A36","pred":"chebi_id","subj":"T36","obj":"http://purl.obolibrary.org/obo/CHEBI_76649"},{"id":"A37","pred":"chebi_id","subj":"T37","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A38","pred":"chebi_id","subj":"T38","obj":"http://purl.obolibrary.org/obo/CHEBI_63895"},{"id":"A39","pred":"chebi_id","subj":"T38","obj":"http://purl.obolibrary.org/obo/CHEBI_74072"},{"id":"A40","pred":"chebi_id","subj":"T40","obj":"http://purl.obolibrary.org/obo/CHEBI_61049"},{"id":"A41","pred":"chebi_id","subj":"T40","obj":"http://purl.obolibrary.org/obo/CHEBI_61057"},{"id":"A42","pred":"chebi_id","subj":"T42","obj":"http://purl.obolibrary.org/obo/CHEBI_61049"},{"id":"A43","pred":"chebi_id","subj":"T43","obj":"http://purl.obolibrary.org/obo/CHEBI_82594"},{"id":"A44","pred":"chebi_id","subj":"T44","obj":"http://purl.obolibrary.org/obo/CHEBI_30780"}],"text":"Table 1 Patient labs from Day 1–10.\nLabratory Test Results 4/11/20Day 1 4/13/20day 3 4/14/20day 4 4/15/20day 5 4/16/20day 6 4/17/20day 7 4/18/20day 8 4/20/20day 10\nWBC(4.5–11 × 109/L) 6.94 6.73 12.13 8.27 8.03 8.89\nLymphocytes(30–45 %) 2.90 % 3.70 % 3.30 % 6.50 %\nCreatinine(Male: 0.70−1.30 mg/dL) 1.20 1.30 1.50 1.10 1.00 0.90 0.90\nAST(10−40 units/L) 21 25 29 34 37 25 22\nALT(10−40 units/L) 29 26 28 45 64 53 51\nAlkaline phosphatase(30−120 units/L) 81 75 72 68 63 63 72\nLDH(80–225 units/L) 226.00 344.00\nC-reactive protein (\u003c0.8 mg/dL) 3.70 1.20 0.60\nIL-6(5−15 pg/mL) 18.2 670.8 392.8 280.7\nPrograf/ Tacrolimus levels(5.0−15.0 ng/mL) 17.30 14.80 7.90\nFerritin(male: 54–755 pmol/L) 336.50 225.90\nVBG pH 7.47pO2 81pCO2 32HCO3 23.20\nABG pH 7.42pO2 72pCO2 33HCO3 21.4\nSerology\nInfluenza Negative\nCoronavirus Negative Positive"}

    LitCovid-PubTator

    {"project":"LitCovid-PubTator","denotations":[{"id":"116","span":{"begin":505,"end":523},"obj":"Gene"},{"id":"117","span":{"begin":552,"end":556},"obj":"Gene"},{"id":"118","span":{"begin":793,"end":804},"obj":"Species"},{"id":"119","span":{"begin":264,"end":274},"obj":"Chemical"},{"id":"121","span":{"begin":8,"end":15},"obj":"Species"}],"attributes":[{"id":"A116","pred":"tao:has_database_id","subj":"116","obj":"Gene:1401"},{"id":"A117","pred":"tao:has_database_id","subj":"117","obj":"Gene:3569"},{"id":"A118","pred":"tao:has_database_id","subj":"118","obj":"Tax:11118"},{"id":"A119","pred":"tao:has_database_id","subj":"119","obj":"MESH:D003404"},{"id":"A121","pred":"tao:has_database_id","subj":"121","obj":"Tax:9606"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"Table 1 Patient labs from Day 1–10.\nLabratory Test Results 4/11/20Day 1 4/13/20day 3 4/14/20day 4 4/15/20day 5 4/16/20day 6 4/17/20day 7 4/18/20day 8 4/20/20day 10\nWBC(4.5–11 × 109/L) 6.94 6.73 12.13 8.27 8.03 8.89\nLymphocytes(30–45 %) 2.90 % 3.70 % 3.30 % 6.50 %\nCreatinine(Male: 0.70−1.30 mg/dL) 1.20 1.30 1.50 1.10 1.00 0.90 0.90\nAST(10−40 units/L) 21 25 29 34 37 25 22\nALT(10−40 units/L) 29 26 28 45 64 53 51\nAlkaline phosphatase(30−120 units/L) 81 75 72 68 63 63 72\nLDH(80–225 units/L) 226.00 344.00\nC-reactive protein (\u003c0.8 mg/dL) 3.70 1.20 0.60\nIL-6(5−15 pg/mL) 18.2 670.8 392.8 280.7\nPrograf/ Tacrolimus levels(5.0−15.0 ng/mL) 17.30 14.80 7.90\nFerritin(male: 54–755 pmol/L) 336.50 225.90\nVBG pH 7.47pO2 81pCO2 32HCO3 23.20\nABG pH 7.42pO2 72pCO2 33HCO3 21.4\nSerology\nInfluenza Negative\nCoronavirus Negative Positive"}

    LitCovid-PD-GO-BP

    {"project":"LitCovid-PD-GO-BP","denotations":[{"id":"T5","span":{"begin":422,"end":433},"obj":"http://purl.obolibrary.org/obo/GO_0016791"}],"text":"Table 1 Patient labs from Day 1–10.\nLabratory Test Results 4/11/20Day 1 4/13/20day 3 4/14/20day 4 4/15/20day 5 4/16/20day 6 4/17/20day 7 4/18/20day 8 4/20/20day 10\nWBC(4.5–11 × 109/L) 6.94 6.73 12.13 8.27 8.03 8.89\nLymphocytes(30–45 %) 2.90 % 3.70 % 3.30 % 6.50 %\nCreatinine(Male: 0.70−1.30 mg/dL) 1.20 1.30 1.50 1.10 1.00 0.90 0.90\nAST(10−40 units/L) 21 25 29 34 37 25 22\nALT(10−40 units/L) 29 26 28 45 64 53 51\nAlkaline phosphatase(30−120 units/L) 81 75 72 68 63 63 72\nLDH(80–225 units/L) 226.00 344.00\nC-reactive protein (\u003c0.8 mg/dL) 3.70 1.20 0.60\nIL-6(5−15 pg/mL) 18.2 670.8 392.8 280.7\nPrograf/ Tacrolimus levels(5.0−15.0 ng/mL) 17.30 14.80 7.90\nFerritin(male: 54–755 pmol/L) 336.50 225.90\nVBG pH 7.47pO2 81pCO2 32HCO3 23.20\nABG pH 7.42pO2 72pCO2 33HCO3 21.4\nSerology\nInfluenza Negative\nCoronavirus Negative Positive"}

    LitCovid-sentences

    {"project":"LitCovid-sentences","denotations":[{"id":"T44","span":{"begin":0,"end":35},"obj":"Sentence"},{"id":"T45","span":{"begin":36,"end":163},"obj":"Sentence"},{"id":"T46","span":{"begin":164,"end":214},"obj":"Sentence"},{"id":"T47","span":{"begin":215,"end":263},"obj":"Sentence"},{"id":"T48","span":{"begin":264,"end":280},"obj":"Sentence"},{"id":"T49","span":{"begin":281,"end":332},"obj":"Sentence"},{"id":"T50","span":{"begin":333,"end":372},"obj":"Sentence"},{"id":"T51","span":{"begin":373,"end":412},"obj":"Sentence"},{"id":"T52","span":{"begin":413,"end":470},"obj":"Sentence"},{"id":"T53","span":{"begin":471,"end":504},"obj":"Sentence"},{"id":"T54","span":{"begin":505,"end":551},"obj":"Sentence"},{"id":"T55","span":{"begin":552,"end":591},"obj":"Sentence"},{"id":"T56","span":{"begin":592,"end":651},"obj":"Sentence"},{"id":"T57","span":{"begin":652,"end":666},"obj":"Sentence"},{"id":"T58","span":{"begin":667,"end":695},"obj":"Sentence"},{"id":"T59","span":{"begin":696,"end":730},"obj":"Sentence"},{"id":"T60","span":{"begin":731,"end":764},"obj":"Sentence"},{"id":"T61","span":{"begin":765,"end":773},"obj":"Sentence"},{"id":"T62","span":{"begin":774,"end":792},"obj":"Sentence"},{"id":"T63","span":{"begin":793,"end":822},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Table 1 Patient labs from Day 1–10.\nLabratory Test Results 4/11/20Day 1 4/13/20day 3 4/14/20day 4 4/15/20day 5 4/16/20day 6 4/17/20day 7 4/18/20day 8 4/20/20day 10\nWBC(4.5–11 × 109/L) 6.94 6.73 12.13 8.27 8.03 8.89\nLymphocytes(30–45 %) 2.90 % 3.70 % 3.30 % 6.50 %\nCreatinine(Male: 0.70−1.30 mg/dL) 1.20 1.30 1.50 1.10 1.00 0.90 0.90\nAST(10−40 units/L) 21 25 29 34 37 25 22\nALT(10−40 units/L) 29 26 28 45 64 53 51\nAlkaline phosphatase(30−120 units/L) 81 75 72 68 63 63 72\nLDH(80–225 units/L) 226.00 344.00\nC-reactive protein (\u003c0.8 mg/dL) 3.70 1.20 0.60\nIL-6(5−15 pg/mL) 18.2 670.8 392.8 280.7\nPrograf/ Tacrolimus levels(5.0−15.0 ng/mL) 17.30 14.80 7.90\nFerritin(male: 54–755 pmol/L) 336.50 225.90\nVBG pH 7.47pO2 81pCO2 32HCO3 23.20\nABG pH 7.42pO2 72pCO2 33HCO3 21.4\nSerology\nInfluenza Negative\nCoronavirus Negative Positive"}