> top > docs > PMC:7318948 > annotations

PMC:7318948 JSONTXT

Annnotations TAB JSON ListView MergeView

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T1 13-24 DG_35 denotes tocilizumab
T2 28-39 UBERON:0001004 denotes respiratory
T3 70-79 SP_7 denotes COVID -19
T4 115-120 UBERON:0000062 denotes organ
T5 255-266 NCBITaxon:11118 denotes Coronavirus
T6 276-284 SP_7 denotes COVID-19
T7 313-319 GO:0016265 denotes deaths
T8 341-346 UBERON:0000062 denotes organ
T9 388-406 CHEBI:35705;CHEBI:35705 denotes immunosuppressants
T10 443-451 SP_7 denotes COVID-19
T11 523-531 SP_7 denotes COVID-19
T12 576-584 SP_7 denotes COVID-19
T13 605-610 UBERON:0000062 denotes organ
T14 628-639 DG_35 denotes tocilizumab
T15 644-657 PR:000001393 denotes interleukin-6
T16 659-663 PR:000001393 denotes IL-6
T17 665-674 CHEBI:35222;CHEBI:35222 denotes inhibitor
T18 696-704 SP_7 denotes COVID-19
T19 725-731 UBERON:0002113 denotes kidney
T20 736-741 UBERON:0002107 denotes liver
T21 782-793 DG_35 denotes tocilizumab
T22 953-961 SP_7 denotes COVID-19
T23 1164-1172 SP_7 denotes COVID-19
T24 1195-1201 GO:0016265 denotes deaths
T25 1250-1261 NCBITaxon:11118 denotes Coronavirus
T26 1368-1376 SP_7 denotes COVID-19
T27 1385-1391 GO:0016265 denotes deaths
T28 1441-1449 SP_7 denotes COVID-19
T29 1506-1518 UBERON:0001852 denotes endotracheal
T30 1677-1685 SP_7 denotes COVID-19
T31 1720-1725 UBERON:0000062 denotes organ
T32 1819-1827 SP_7 denotes COVID-19
T33 1877-1895 CHEBI:35705;CHEBI:35705 denotes immunosuppressants
T34 1995-2000 NCBITaxon:10239 denotes viral
T35 2101-2114 PR:000001393 denotes interleukin-6
T36 2116-2120 PR:000001393 denotes IL-6
T37 2149-2153 UBERON:0002048;GO:0030324 denotes lung
T38 2154-2160 GO:0006281 denotes repair
T39 2171-2176 NCBITaxon:10239 denotes viral
T40 2211-2215 PR:000001393 denotes IL-6
T41 2216-2225 CHEBI:35222;CHEBI:35222 denotes inhibitor
T42 2226-2231 CHEBI:23888;CHEBI:23888 denotes drugs
T43 2279-2287 SP_7 denotes COVID-19
T44 2306-2312 UBERON:0002113 denotes kidney
T45 2317-2322 UBERON:0002107 denotes liver
T46 2357-2361 PR:000001393 denotes IL-6
T47 2362-2371 CHEBI:35222;CHEBI:35222 denotes inhibitor
T48 2464-2470 UBERON:0002113 denotes kidney
T49 2475-2480 UBERON:0002107 denotes liver
T50 2603-2609 UBERON:0002048 denotes breath
T51 2766-2771 UBERON:0001443 denotes chest
T52 2865-2873 SP_7 denotes COVID-19
T53 2986-2991 CL:0000738 denotes white
T54 2992-2997 CL:0000738;UBERON:0000178 denotes blood
T55 2998-3002 CL:0000738 denotes cell
T56 3048-3058 CL:0000542 denotes lymphocyte
T57 3085-3090 UBERON:0002107 denotes liver
T58 3107-3122 NCBITaxon:10358 denotes Cytomegalovirus
T59 3127-3137 NCBITaxon:517 denotes Bordetella
T60 3180-3197 CHEBI:35705;CHEBI:35705 denotes immunosuppressant
T61 3219-3236 CHEBI:168396;CHEBI:168396 denotes mycophenolic acid
T62 3259-3269 CHEBI:8382;CHEBI:8382 denotes prednisone
T63 3384-3388 UBERON:0000165 denotes oral
T64 3389-3399 CHEBI:8382;CHEBI:8382 denotes prednisone
T65 3403-3421 CHEBI:12071;CHEBI:12071;DG_36 denotes methylprednisolone
T66 3504-3512 CHEBI:478164;CHEBI:478164 denotes cefepime
T67 3564-3582 CHEBI:5801;DG_20;CHEBI:5801 denotes hydroxychloroquine
T68 3796-3801 UBERON:0001443 denotes chest
T69 3827-3831 UBERON:0002171 denotes lobe
T70 3851-3857 UBERON:0000915 denotes Thorax
T71 3913-3917 UBERON:3010752 denotes lobe
T72 3977-3982 NCBITaxon:10239 denotes viral
T73 4158-4166 SP_7 denotes COVID-19
T74 4167-4172 UBERON:0001977 denotes serum
T75 4173-4183 GO:0042571 denotes antibodies
T76 4224-4232 SP_7 denotes COVID-19
T77 4233-4247 GO:0071743 denotes IgG antibodies
T78 4283-4294 DG_35 denotes tocilizumab
T79 4369-4375 UBERON:0002048 denotes breath
T80 4445-4450 UBERON:0000004 denotes nasal
T81 4551-4556 UBERON:0001443 denotes chest
T82 4666-4683 CHEBI:168396;CHEBI:168396 denotes Mycophenolic acid
T83 4688-4698 CHEBI:15891;CHEBI:15891 denotes tacrolimus
T88 6194-6205 DG_35 denotes tocilizumab
T89 6348-6353 UBERON:0001443 denotes chest
T90 6364-6369 UBERON:0002107 denotes liver
T91 6386-6391 UBERON:0000178 denotes blood
T92 6392-6396 CHEBI:16199;CHEBI:16199 denotes urea
T93 6417-6427 CHEBI:16737;CHEBI:16737 denotes creatinine
T94 6554-6563 NCBITaxon:2 denotes bacterial
T95 6635-6641 UBERON:0001969 denotes plasma
T96 6860-6870 SP_7 denotes SARS-CoV-2
T97 6902-6913 NCBITaxon:11118 denotes coronavirus
T98 7052-7060 SP_7 denotes COVID-19
T99 7083-7089 GO:0016265 denotes deaths
T100 7138-7149 NCBITaxon:11118 denotes Coronavirus
T101 7351-7356 UBERON:0000062 denotes organ
T102 7462-7479 CHEBI:35705;CHEBI:35705 denotes immunosuppressant
T103 7636-7644 SP_7 denotes Covid-19
T104 7927-7932 UBERON:0002048 denotes cough
T105 7955-7961 UBERON:0007311 denotes sputum
T106 8038-8047 UBERON:0000916 denotes abdominal
T107 8103-8111 SP_7 denotes COVID-19
T108 8189-8194 UBERON:0000062 denotes organ
T156 8261-8269 SP_7 denotes COVID 19
T157 8300-8313 CHEBI:16625;CHEBI:16625 denotes Mycophenolate
T158 8329-8334 CL:0000738 denotes White
T159 8335-8340 CL:0000738;UBERON:0000178 denotes blood
T160 8341-8345 CL:0000738 denotes cell
T161 8359-8377 PR:000005897 denotes C-reactive protein
T162 8385-8392 CHEBI:24996;CHEBI:24996 denotes lactate
T163 11725-11733 SP_7 denotes COVID-19
T164 11782-11790 SP_7 denotes COVID-19
T165 11805-11816 UBERON:0001004 denotes respiratory
T166 11897-11904 GO:0006952 denotes defense
T167 11916-11921 NCBITaxon:10239 denotes virus
T168 12017-12024 GO:0006952 denotes defense
T169 12109-12115 UBERON:0000479 denotes tissue
T170 12176-12187 CL:0000232 denotes erythrocyte
T171 12214-12232 PR:000005897 denotes C-reactive protein
T172 12234-12237 PR:000005897 denotes CRP
T173 12240-12245 UBERON:0001977 denotes serum
T174 12342-12350 SP_7 denotes COVID-19
T175 12365-12378 PR:000001393 denotes Interleukin-6
T176 12380-12384 PR:000001393 denotes IL-6
T177 12493-12497 PR:000001393 denotes IL-6
T178 12680-12684 PR:000001393 denotes IL-6
T179 12700-12705 PR:000001394 denotes IL-6R
T180 12720-12727 GO:0032991 denotes complex
T181 12737-12741 PR:000001394 denotes IL6R
T182 12742-12749 GO:0032991 denotes complex
T183 12764-12772 GO:0016020 denotes membrane
T184 12806-12819 GO:0005622;GO:0035556 denotes intracellular
T185 12820-12832 GO:0009293 denotes transduction
T186 12889-12893 PR:000001393 denotes IL-6
T187 12905-12911 PR:000001798 denotes sIL-6R
T188 12926-12933 GO:0032991 denotes complex
T189 12943-12948 PR:000001798 denotes sIL6R
T190 12949-12956 GO:0032991 denotes complex
T191 12971-12979 GO:0016020 denotes membrane
T192 13008-13021 GO:0005622;GO:0035556 denotes intracellular
T193 13022-13041 GO:0035556 denotes signal transduction
T194 13104-13111 GO:0032991 denotes complex
T195 13117-13123 PR:000001798 denotes sIL-6R
T196 13135-13141 PR:000001798 denotes sIL-6R
T197 13158-13166 GO:0016020 denotes membrane
T198 13208-13211 PR:000002110 denotes ATK
T199 13321-13325 PR:000001393 denotes IL-6
T200 13460-13464 PR:000001393 denotes IL-6
T201 13475-13483 SP_7 denotes COVID-19
T202 13565-13569 PR:000001393 denotes IL-6
T203 13693-13697 PR:000001393 denotes IL-6
T204 13708-13716 SP_7 denotes COVID-19
T205 13737-13742 UBERON:0000062 denotes organ
T206 13854-13865 DG_35 denotes tocilizumab
T207 13880-13888 GO:0042571 denotes antibody
T208 13907-13911 PR:000001393 denotes IL-6
T209 13974-13979 PR:000001394 denotes IL-6R
T210 13981-13992 DG_35 denotes tocilizumab
T211 14226-14234 SP_7 denotes COVID-19
T212 14521-14532 DG_35 denotes tocilizumab
T213 14623-14631 SP_7 denotes Covid-19
T214 14656-14665 DG_23 denotes lopinavir
T215 14667-14685 DG_36;CHEBI:30860;CHEBI:30860 denotes methylprednisolone
T216 14953-14957 PR:000001393 denotes IL-6
T217 14968-14981 CHEBI:6909;CHEBI:6909 denotes metronidazole
T218 15033-15046 CHEBI:6909;CHEBI:6909 denotes metronidazole
T219 15057-15062 UBERON:0001977 denotes serum
T220 15063-15067 PR:000001393 denotes IL-6
T221 15101-15118 CHEBI:35705;CHEBI:35705 denotes immunosuppressive
T222 15159-15167 SP_7 denotes COVID-19
T223 15222-15228 UBERON:0002405;GO:0006955 denotes immune
T224 15229-15237 GO:0006955 denotes response
T225 15250-15255 NCBITaxon:10239 denotes viral
T226 15343-15360 CHEBI:35705;CHEBI:35705 denotes immunosuppressive
T227 15466-15471 NCBITaxon:10239 denotes viral
T228 15636-15640 SP_10 denotes SARS
T229 15670-15675 NCBITaxon:10239 denotes viral
T230 15875-15880 UBERON:0002107 denotes liver
T231 15927-15935 SP_7 denotes COVID-19
T232 16033-16043 CL:0000542 denotes lymphocyte
T233 16081-16085 PR:000001393 denotes IL-6
T234 16155-16163 SP_7 denotes COVID-19
T235 16220-16224 PR:000001393 denotes IL-6
T236 16254-16262 SP_7 denotes COVID-19
T237 16356-16360 PR:000001393 denotes IL-6
T238 16408-16413 NCBITaxon:10239 denotes viral
T239 16509-16514 NCBITaxon:10239 denotes viral
T240 16600-16604 PR:000001393 denotes IL-6
T241 16638-16648 CHEBI:15891;CHEBI:15891 denotes tacrolimus
T242 16680-16697 CHEBI:35705;CHEBI:35705 denotes immunosuppressive
T243 16773-16790 CHEBI:35705;CHEBI:35705 denotes immunosuppressive
T244 16876-16884 SP_7 denotes COVID-19
T245 16918-16923 NCBITaxon:10239 denotes virus
T246 16924-16928 GO:0018995 denotes host
T247 16992-17000 SP_7 denotes COVID-19
T248 17185-17196 UBERON:0001004 denotes respiratory
T249 17240-17244 PR:000001393 denotes IL-6
T250 17491-17502 DG_35 denotes tocilizumab
T251 17690-17698 SP_7 denotes COVID-19
T252 17736-17741 UBERON:0000062 denotes organ
T253 17766-17770 PR:000001393 denotes IL-6
T254 17771-17780 CHEBI:35222;CHEBI:35222 denotes inhibitor
T255 17880-17891 DG_35 denotes tocilizumab
T256 17968-17979 UBERON:0001004 denotes respiratory
T257 18145-18156 UBERON:0001004 denotes respiratory
T258 18182-18196 GO:0007596 denotes Thromboembolic
T259 18237-18248 UBERON:0001004 denotes respiratory
T260 18353-18361 SP_7 denotes COVID-19
T261 18382-18387 UBERON:0000062 denotes organ
T262 18471-18479 SP_7 denotes COVID-19
T35205 13-24 DG_35 denotes tocilizumab
T78286 28-39 UBERON:0001004 denotes respiratory
T12802 70-79 SP_7 denotes COVID -19
T46866 115-120 UBERON:0000062 denotes organ
T36578 255-266 NCBITaxon:11118 denotes Coronavirus
T5455 276-284 SP_7 denotes COVID-19
T54194 313-319 GO:0016265 denotes deaths
T90485 341-346 UBERON:0000062 denotes organ
T79164 388-406 CHEBI:35705;CHEBI:35705 denotes immunosuppressants
T39889 443-451 SP_7 denotes COVID-19
T93635 523-531 SP_7 denotes COVID-19
T83742 576-584 SP_7 denotes COVID-19
T91437 605-610 UBERON:0000062 denotes organ
T91213 628-639 DG_35 denotes tocilizumab
T94437 644-657 PR:000001393 denotes interleukin-6
T55565 659-663 PR:000001393 denotes IL-6
T92863 665-674 CHEBI:35222;CHEBI:35222 denotes inhibitor
T64846 696-704 SP_7 denotes COVID-19
T10292 725-731 UBERON:0002113 denotes kidney
T23415 736-741 UBERON:0002107 denotes liver
T55060 782-793 DG_35 denotes tocilizumab
T13776 953-961 SP_7 denotes COVID-19
T26793 1164-1172 SP_7 denotes COVID-19
T17320 1195-1201 GO:0016265 denotes deaths
T29874 1250-1261 NCBITaxon:11118 denotes Coronavirus
T65188 1368-1376 SP_7 denotes COVID-19
T18243 1385-1391 GO:0016265 denotes deaths
T75932 1441-1449 SP_7 denotes COVID-19
T83510 1506-1518 UBERON:0001852 denotes endotracheal
T83503 1677-1685 SP_7 denotes COVID-19
T80946 1720-1725 UBERON:0000062 denotes organ
T2797 1819-1827 SP_7 denotes COVID-19
T18817 1877-1895 CHEBI:35705;CHEBI:35705 denotes immunosuppressants
T49695 1995-2000 NCBITaxon:10239 denotes viral
T30614 2101-2114 PR:000001393 denotes interleukin-6
T71673 2116-2120 PR:000001393 denotes IL-6
T97545 2149-2153 UBERON:0002048;GO:0030324 denotes lung
T69652 2154-2160 GO:0006281 denotes repair
T14865 2171-2176 NCBITaxon:10239 denotes viral
T99385 2211-2215 PR:000001393 denotes IL-6
T38399 2216-2225 CHEBI:35222;CHEBI:35222 denotes inhibitor
T45524 2226-2231 CHEBI:23888;CHEBI:23888 denotes drugs
T52740 2279-2287 SP_7 denotes COVID-19
T66483 2306-2312 UBERON:0002113 denotes kidney
T65017 2317-2322 UBERON:0002107 denotes liver
T45829 2357-2361 PR:000001393 denotes IL-6
T679 2362-2371 CHEBI:35222;CHEBI:35222 denotes inhibitor
T32180 2464-2470 UBERON:0002113 denotes kidney
T73190 2475-2480 UBERON:0002107 denotes liver
T53403 2603-2609 UBERON:0002048 denotes breath
T23752 2766-2771 UBERON:0001443 denotes chest
T80248 2865-2873 SP_7 denotes COVID-19
T51573 2986-2991 CL:0000738 denotes white
T84453 2992-2997 CL:0000738;UBERON:0000178 denotes blood
T13289 2998-3002 CL:0000738 denotes cell
T23080 3048-3058 CL:0000542 denotes lymphocyte
T19421 3085-3090 UBERON:0002107 denotes liver
T296 3107-3122 NCBITaxon:10358 denotes Cytomegalovirus
T32770 3127-3137 NCBITaxon:517 denotes Bordetella
T82516 3180-3197 CHEBI:35705;CHEBI:35705 denotes immunosuppressant
T81314 3219-3236 CHEBI:168396;CHEBI:168396 denotes mycophenolic acid
T93225 3259-3269 CHEBI:8382;CHEBI:8382 denotes prednisone
T44728 3384-3388 UBERON:0000165 denotes oral
T75404 3389-3399 CHEBI:8382;CHEBI:8382 denotes prednisone
T13426 3403-3421 CHEBI:12071;CHEBI:12071;DG_36 denotes methylprednisolone
T22170 3504-3512 CHEBI:478164;CHEBI:478164 denotes cefepime
T46657 3564-3582 CHEBI:5801;DG_20;CHEBI:5801 denotes hydroxychloroquine
T72158 3796-3801 UBERON:0001443 denotes chest
T49026 3827-3831 UBERON:0002171 denotes lobe
T449 3851-3857 UBERON:0000915 denotes Thorax
T62838 3913-3917 UBERON:3010752 denotes lobe
T39963 3977-3982 NCBITaxon:10239 denotes viral
T8877 4158-4166 SP_7 denotes COVID-19
T70913 4167-4172 UBERON:0001977 denotes serum
T31701 4173-4183 GO:0042571 denotes antibodies
T42057 4224-4232 SP_7 denotes COVID-19
T96333 4233-4247 GO:0071743 denotes IgG antibodies
T15351 4283-4294 DG_35 denotes tocilizumab
T75046 4369-4375 UBERON:0002048 denotes breath
T55692 4445-4450 UBERON:0000004 denotes nasal
T63107 4551-4556 UBERON:0001443 denotes chest
T83619 4666-4683 CHEBI:168396;CHEBI:168396 denotes Mycophenolic acid
T25649 4688-4698 CHEBI:15891;CHEBI:15891 denotes tacrolimus
T84 5352-5362 CHEBI:16737;CHEBI:16737 denotes Creatinine
T61793 6194-6205 DG_35 denotes tocilizumab
T10250 6348-6353 UBERON:0001443 denotes chest
T18769 6364-6369 UBERON:0002107 denotes liver
T14105 6386-6391 UBERON:0000178 denotes blood
T47981 6392-6396 CHEBI:16199;CHEBI:16199 denotes urea
T4500 6417-6427 CHEBI:16737;CHEBI:16737 denotes creatinine
T9642 6554-6563 NCBITaxon:2 denotes bacterial
T21028 6635-6641 UBERON:0001969 denotes plasma
T87433 6860-6870 SP_7 denotes SARS-CoV-2
T40787 6902-6913 NCBITaxon:11118 denotes coronavirus
T17140 7052-7060 SP_7 denotes COVID-19
T58361 7083-7089 GO:0016265 denotes deaths
T98629 7138-7149 NCBITaxon:11118 denotes Coronavirus
T11144 7351-7356 UBERON:0000062 denotes organ
T47847 7462-7479 CHEBI:35705;CHEBI:35705 denotes immunosuppressant
T2205 7636-7644 SP_7 denotes Covid-19
T91774 7927-7932 UBERON:0002048 denotes cough
T94519 7955-7961 UBERON:0007311 denotes sputum
T86620 8038-8047 UBERON:0000916 denotes abdominal
T59678 8103-8111 SP_7 denotes COVID-19
T92391 8189-8194 UBERON:0000062 denotes organ
T109 8261-8269 SP_7 denotes COVID 19
T110 8300-8313 CHEBI:16625;CHEBI:16625 denotes Mycophenolate
T111 8329-8334 CL:0000738 denotes White
T112 8335-8340 CL:0000738;UBERON:0000178 denotes blood
T113 8341-8345 CL:0000738 denotes cell
T114 8359-8377 PR:000005897 denotes C-reactive protein
T115 8385-8392 CHEBI:24996;CHEBI:24996 denotes lactate
T116 8423-8428 UBERON:0000062 denotes Organ
T117 8561-8572 CL:0000542 denotes Lymphocytes
T118 8726-8747 CHEBI:27641;CHEBI:27641 denotes cefoperazonesulbactam
T119 8894-8904 CHEBI:15891;CHEBI:15891 denotes tacrolimus
T120 8994-9006 CHEBI:63611;CHEBI:63611 denotes moxifloxacin
T121 9020-9025 SP_6;NCBITaxon:9606 denotes human
T122 9026-9042 PR:000024938 denotes interferon alpha
T123 9044-9062 DG_36 denotes methylprednisolone
T124 9064-9069 SP_6;NCBITaxon:9606 denotes human
T125 9263-9270 DG_49 denotes arbidol
T126 9271-9286 CHEBI:24261;CHEBI:24261 denotes Glucocorticoids
T127 9432-9439 DG_49 denotes arbidol
T128 9440-9448 CHEBI:478164;CHEBI:478164 denotes cefepime
T129 9458-9473 CHEBI:24261;CHEBI:24261 denotes Glucocorticoids
T130 9634-9641 CHEBI:57472;CHEBI:57472;DG_49 denotes arbidol
T131 9642-9654 CHEBI:27641;CHEBI:27641 denotes cefepimeIVIG
T132 9870-9877 CHEBI:57472;CHEBI:57472;DG_49 denotes arbidol
T133 10074-10081 CHEBI:57472;CHEBI:57472;DG_49 denotes arbidol
T134 10082-10097 CHEBI:24261;CHEBI:24261 denotes Glucocorticoids
T135 10212-10222 DG_49 denotes Umifenovir
T136 10224-10233 DG_23 denotes Lopinavir
T137 10234-10243 DG_30 denotes ritonavir
T138 10244-10248 CHEBI:42098;CHEBI:42098 denotes IVIG
T139 10249-10261 CHEBI:27641;CHEBI:27641 denotes Cefoperazone
T140 10449-10458 DG_30 denotes ritonavir
T141 10460-10469 DG_29 denotes ribavirin
T142 10471-10487 PR:000008915 denotes interferon alpha
T143 10492-10510 DG_36 denotes methylprednisolone
T144 10675-10689 CHEBI:29007;CHEBI:29007 denotes ceftriaxone 26
T145 10983-10991 CHEBI:23243;CHEBI:23243 denotes opinavir
T146 10992-11001 DG_30 denotes ritonavir
T147 11003-11014 CHEBI:29007;CHEBI:29007 denotes ceftriaxone
T148 11016-11026 CHEBI:15891;CHEBI:15891 denotes tacrolimus
T149 11086-11090 PR:000001395 denotes IL-8
T150 11097-11121 CL:0000775 denotes neutrophil normal 67 Not
T151 11324-11329 GO:0016265 denotes death
T152 11343-11348 UBERON:0000062 denotes organ
T153 11428-11440 CHEBI:25435;CHEBI:25435 denotes Moxifloxacin
T154 11441-11459 DG_36 denotes Methylprednisolone
T155 11491-11515 CHEBI:35705;CHEBI:35705 denotes immunosuppressive agents
T74105 11725-11733 SP_7 denotes COVID-19
T48382 11782-11790 SP_7 denotes COVID-19
T53841 11805-11816 UBERON:0001004 denotes respiratory
T69954 11897-11904 GO:0006952 denotes defense
T35920 11916-11921 NCBITaxon:10239 denotes virus
T99777 12017-12024 GO:0006952 denotes defense
T93200 12109-12115 UBERON:0000479 denotes tissue
T89188 12176-12187 CL:0000232 denotes erythrocyte
T89814 12214-12232 PR:000005897 denotes C-reactive protein
T54489 12234-12237 PR:000005897 denotes CRP
T55308 12240-12245 UBERON:0001977 denotes serum
T91455 12342-12350 SP_7 denotes COVID-19
T47700 12365-12378 PR:000001393 denotes Interleukin-6
T50297 12380-12384 PR:000001393 denotes IL-6
T79041 12493-12497 PR:000001393 denotes IL-6
T64701 12680-12684 PR:000001393 denotes IL-6
T65264 12700-12705 PR:000001394 denotes IL-6R
T24982 12720-12727 GO:0032991 denotes complex
T68031 12737-12741 PR:000001394 denotes IL6R
T46746 12742-12749 GO:0032991 denotes complex
T40582 12764-12772 GO:0016020 denotes membrane
T59216 12806-12819 GO:0005622;GO:0035556 denotes intracellular
T30937 12820-12832 GO:0009293 denotes transduction
T71806 12889-12893 PR:000001393 denotes IL-6
T48498 12905-12911 PR:000001798 denotes sIL-6R
T61458 12926-12933 GO:0032991 denotes complex
T21126 12943-12948 PR:000001798 denotes sIL6R
T30624 12949-12956 GO:0032991 denotes complex
T32439 12971-12979 GO:0016020 denotes membrane
T86675 13008-13021 GO:0005622;GO:0035556 denotes intracellular
T15304 13022-13041 GO:0035556 denotes signal transduction
T43481 13104-13111 GO:0032991 denotes complex
T75201 13117-13123 PR:000001798 denotes sIL-6R
T18390 13135-13141 PR:000001798 denotes sIL-6R
T30397 13158-13166 GO:0016020 denotes membrane
T25251 13208-13211 PR:000002110 denotes ATK
T74114 13321-13325 PR:000001393 denotes IL-6
T60722 13460-13464 PR:000001393 denotes IL-6
T56397 13475-13483 SP_7 denotes COVID-19
T49424 13565-13569 PR:000001393 denotes IL-6
T23213 13693-13697 PR:000001393 denotes IL-6
T7988 13708-13716 SP_7 denotes COVID-19
T61629 13737-13742 UBERON:0000062 denotes organ
T16211 13854-13865 DG_35 denotes tocilizumab
T77835 13880-13888 GO:0042571 denotes antibody
T47264 13907-13911 PR:000001393 denotes IL-6
T81296 13974-13979 PR:000001394 denotes IL-6R
T19612 13981-13992 DG_35 denotes tocilizumab
T40951 14226-14234 SP_7 denotes COVID-19
T81802 14521-14532 DG_35 denotes tocilizumab
T59755 14623-14631 SP_7 denotes Covid-19
T94468 14656-14665 DG_23 denotes lopinavir
T18366 14667-14685 DG_36;CHEBI:30860;CHEBI:30860 denotes methylprednisolone
T58059 14953-14957 PR:000001393 denotes IL-6
T58922 14968-14981 CHEBI:6909;CHEBI:6909 denotes metronidazole
T27613 15033-15046 CHEBI:6909;CHEBI:6909 denotes metronidazole
T61924 15057-15062 UBERON:0001977 denotes serum
T20855 15063-15067 PR:000001393 denotes IL-6
T4621 15101-15118 CHEBI:35705;CHEBI:35705 denotes immunosuppressive
T9248 15159-15167 SP_7 denotes COVID-19
T85163 15222-15228 UBERON:0002405;GO:0006955 denotes immune
T41905 15229-15237 GO:0006955 denotes response
T33200 15250-15255 NCBITaxon:10239 denotes viral
T45112 15343-15360 CHEBI:35705;CHEBI:35705 denotes immunosuppressive
T53815 15466-15471 NCBITaxon:10239 denotes viral
T54517 15636-15640 SP_10 denotes SARS
T90338 15670-15675 NCBITaxon:10239 denotes viral
T14177 15875-15880 UBERON:0002107 denotes liver
T32097 15927-15935 SP_7 denotes COVID-19
T53579 16033-16043 CL:0000542 denotes lymphocyte
T54424 16081-16085 PR:000001393 denotes IL-6
T55605 16155-16163 SP_7 denotes COVID-19
T82799 16220-16224 PR:000001393 denotes IL-6
T96738 16254-16262 SP_7 denotes COVID-19
T48035 16356-16360 PR:000001393 denotes IL-6
T78381 16408-16413 NCBITaxon:10239 denotes viral
T73784 16509-16514 NCBITaxon:10239 denotes viral
T46486 16600-16604 PR:000001393 denotes IL-6
T69420 16638-16648 CHEBI:15891;CHEBI:15891 denotes tacrolimus
T27409 16680-16697 CHEBI:35705;CHEBI:35705 denotes immunosuppressive
T63247 16773-16790 CHEBI:35705;CHEBI:35705 denotes immunosuppressive
T56582 16876-16884 SP_7 denotes COVID-19
T43770 16918-16923 NCBITaxon:10239 denotes virus
T95404 16924-16928 GO:0018995 denotes host
T75590 16992-17000 SP_7 denotes COVID-19
T92228 17185-17196 UBERON:0001004 denotes respiratory
T33751 17240-17244 PR:000001393 denotes IL-6
T63305 17491-17502 DG_35 denotes tocilizumab
T53081 17690-17698 SP_7 denotes COVID-19
T40237 17736-17741 UBERON:0000062 denotes organ
T50732 17766-17770 PR:000001393 denotes IL-6
T20616 17771-17780 CHEBI:35222;CHEBI:35222 denotes inhibitor
T9065 17880-17891 DG_35 denotes tocilizumab
T92411 17968-17979 UBERON:0001004 denotes respiratory
T9846 18145-18156 UBERON:0001004 denotes respiratory
T4781 18182-18196 GO:0007596 denotes Thromboembolic
T63580 18237-18248 UBERON:0001004 denotes respiratory
T70599 18353-18361 SP_7 denotes COVID-19
T64011 18382-18387 UBERON:0000062 denotes organ
T48557 18471-18479 SP_7 denotes COVID-19

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T1 109-120 Body_part denotes solid organ http://purl.org/sig/ont/fma/fma55670
T2 335-346 Body_part denotes Solid organ http://purl.org/sig/ont/fma/fma55670
T3 599-610 Body_part denotes solid organ http://purl.org/sig/ont/fma/fma55670
T4 644-657 Body_part denotes interleukin-6 http://purl.org/sig/ont/fma/fma264829
T5 725-731 Body_part denotes kidney http://purl.org/sig/ont/fma/fma7203
T6 736-741 Body_part denotes liver http://purl.org/sig/ont/fma/fma7197
T7 809-817 Body_part denotes cytokine http://purl.org/sig/ont/fma/fma84050
T8 1659-1667 Body_part denotes cytokine http://purl.org/sig/ont/fma/fma84050
T9 1714-1725 Body_part denotes solid organ http://purl.org/sig/ont/fma/fma55670
T10 1795-1799 Body_part denotes face http://purl.org/sig/ont/fma/fma24728
T11 1953-1957 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T12 2101-2114 Body_part denotes interleukin-6 http://purl.org/sig/ont/fma/fma264829
T13 2149-2153 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T14 2306-2312 Body_part denotes kidney http://purl.org/sig/ont/fma/fma7203
T15 2317-2322 Body_part denotes liver http://purl.org/sig/ont/fma/fma7197
T16 2385-2393 Body_part denotes cytokine http://purl.org/sig/ont/fma/fma84050
T17 2464-2470 Body_part denotes kidney http://purl.org/sig/ont/fma/fma7203
T18 2475-2480 Body_part denotes liver http://purl.org/sig/ont/fma/fma7197
T19 2766-2771 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T20 2986-3002 Body_part denotes white blood cell http://purl.org/sig/ont/fma/fma62852
T21 2998-3002 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T22 3048-3058 Body_part denotes lymphocyte http://purl.org/sig/ont/fma/fma62863
T23 3085-3090 Body_part denotes liver http://purl.org/sig/ont/fma/fma7197
T24 3796-3801 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T25 3815-3831 Body_part denotes right lower lobe http://purl.org/sig/ont/fma/fma7337
T26 3851-3857 Body_part denotes Thorax http://purl.org/sig/ont/fma/fma9576
T27 4167-4172 Body_part denotes serum http://purl.org/sig/ont/fma/fma63083
T28 4233-4236 Body_part denotes IgG http://purl.org/sig/ont/fma/fma62872
T29 4551-4556 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T30 4834-4840 Body_part denotes Thorax http://purl.org/sig/ont/fma/fma9576
T31 4903-4909 Body_part denotes Thorax http://purl.org/sig/ont/fma/fma9576
T32 4972-4978 Body_part denotes Thorax http://purl.org/sig/ont/fma/fma9576
T33 5038-5043 Body_part denotes Chest http://purl.org/sig/ont/fma/fma9576
T34 5303-5314 Body_part denotes Lymphocytes http://purl.org/sig/ont/fma/fma62863
T35 5604-5611 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T36 6348-6353 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T37 6364-6369 Body_part denotes liver http://purl.org/sig/ont/fma/fma7197
T38 6386-6391 Body_part denotes blood http://purl.org/sig/ont/fma/fma9670
T39 6635-6641 Body_part denotes plasma http://purl.org/sig/ont/fma/fma62970
T40 7345-7356 Body_part denotes solid organ http://purl.org/sig/ont/fma/fma55670
T41 7955-7961 Body_part denotes sputum http://purl.org/sig/ont/fma/fma312401
T42 8183-8194 Body_part denotes solid organ http://purl.org/sig/ont/fma/fma55670
T43 8329-8345 Body_part denotes White blood cell http://purl.org/sig/ont/fma/fma62852
T44 8341-8345 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T45 8370-8377 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T46 8417-8428 Body_part denotes Solid Organ http://purl.org/sig/ont/fma/fma55670
T47 8423-8428 Body_part denotes Organ http://purl.org/sig/ont/fma/fma67498
T48 8561-8572 Body_part denotes Lymphocytes http://purl.org/sig/ont/fma/fma62863
T49 8676-8681 Body_part denotes Liver http://purl.org/sig/ont/fma/fma7197
T50 8716-8724 Body_part denotes capsules http://purl.org/sig/ont/fma/fma85272
T51 8946-8952 Body_part denotes Kidney http://purl.org/sig/ont/fma/fma7203
T52 9143-9154 Body_part denotes Bone marrow http://purl.org/sig/ont/fma/fma9608
T53 9207-9213 Body_part denotes Kidney http://purl.org/sig/ont/fma/fma7203
T54 9375-9381 Body_part denotes Kidney http://purl.org/sig/ont/fma/fma7203
T55 9576-9582 Body_part denotes Kidney http://purl.org/sig/ont/fma/fma7203
T56 9812-9818 Body_part denotes Kidney http://purl.org/sig/ont/fma/fma7203
T57 10016-10022 Body_part denotes Kidney http://purl.org/sig/ont/fma/fma7203
T58 10175-10180 Body_part denotes Liver http://purl.org/sig/ont/fma/fma7197
T59 10403-10409 Body_part denotes Kidney http://purl.org/sig/ont/fma/fma7203
T60 10625-10631 Body_part denotes Kidney http://purl.org/sig/ont/fma/fma7203
T61 10758-10764 Body_part denotes Kidney http://purl.org/sig/ont/fma/fma7203
T62 10922-10928 Body_part denotes Kidney http://purl.org/sig/ont/fma/fma7203
T63 11097-11107 Body_part denotes neutrophil http://purl.org/sig/ont/fma/fma62860
T64 11161-11167 Body_part denotes Kidney http://purl.org/sig/ont/fma/fma7203
T65 11343-11348 Body_part denotes organ http://purl.org/sig/ont/fma/fma67498
T66 11385-11391 Body_part denotes Kidney http://purl.org/sig/ont/fma/fma7203
T67 11993-11997 Body_part denotes body http://purl.org/sig/ont/fma/fma256135
T68 12083-12091 Body_part denotes cytokine http://purl.org/sig/ont/fma/fma84050
T69 12109-12115 Body_part denotes tissue http://purl.org/sig/ont/fma/fma9637
T70 12176-12187 Body_part denotes erythrocyte http://purl.org/sig/ont/fma/fma62845
T71 12225-12232 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T72 12240-12245 Body_part denotes serum http://purl.org/sig/ont/fma/fma63083
T73 12256-12270 Body_part denotes interleukins 6 http://purl.org/sig/ont/fma/fma264829
T74 12256-12268 Body_part denotes interleukins http://purl.org/sig/ont/fma/fma86578
T75 12302-12313 Body_part denotes interleukin http://purl.org/sig/ont/fma/fma86578
T76 12365-12378 Body_part denotes Interleukin-6 http://purl.org/sig/ont/fma/fma264829
T77 12365-12376 Body_part denotes Interleukin http://purl.org/sig/ont/fma/fma86578
T78 12472-12480 Body_part denotes cytokine http://purl.org/sig/ont/fma/fma84050
T79 13589-13597 Body_part denotes cytokine http://purl.org/sig/ont/fma/fma84050
T80 13731-13742 Body_part denotes solid organ http://purl.org/sig/ont/fma/fma55670
T81 13880-13888 Body_part denotes antibody http://purl.org/sig/ont/fma/fma62871
T82 14121-14129 Body_part denotes cytokine http://purl.org/sig/ont/fma/fma84050
T83 15057-15062 Body_part denotes serum http://purl.org/sig/ont/fma/fma63083
T84 15410-15418 Body_part denotes cytokine http://purl.org/sig/ont/fma/fma84050
T85 15472-15475 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T86 15833-15841 Body_part denotes cytokine http://purl.org/sig/ont/fma/fma84050
T87 15875-15880 Body_part denotes liver http://purl.org/sig/ont/fma/fma7197
T88 16033-16043 Body_part denotes lymphocyte http://purl.org/sig/ont/fma/fma62863
T89 16114-16122 Body_part denotes cytokine http://purl.org/sig/ont/fma/fma84050
T90 16724-16732 Body_part denotes cytokine http://purl.org/sig/ont/fma/fma84050
T91 17031-17039 Body_part denotes cytokine http://purl.org/sig/ont/fma/fma84050
T92 17056-17064 Body_part denotes cytokine http://purl.org/sig/ont/fma/fma84050
T93 17315-17323 Body_part denotes cytokine http://purl.org/sig/ont/fma/fma84050
T94 17730-17741 Body_part denotes solid organ http://purl.org/sig/ont/fma/fma55670
T95 17993-18001 Body_part denotes cytokine http://purl.org/sig/ont/fma/fma84050
T96 18376-18387 Body_part denotes solid organ http://purl.org/sig/ont/fma/fma55670

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 115-120 Body_part denotes organ http://purl.obolibrary.org/obo/UBERON_0000062
T2 341-346 Body_part denotes organ http://purl.obolibrary.org/obo/UBERON_0000062
T3 605-610 Body_part denotes organ http://purl.obolibrary.org/obo/UBERON_0000062
T4 725-731 Body_part denotes kidney http://purl.obolibrary.org/obo/UBERON_0002113
T5 736-741 Body_part denotes liver http://purl.obolibrary.org/obo/UBERON_0002107
T6 1720-1725 Body_part denotes organ http://purl.obolibrary.org/obo/UBERON_0000062
T7 1795-1799 Body_part denotes face http://purl.obolibrary.org/obo/UBERON_0001456
T8 2149-2153 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T9 2306-2312 Body_part denotes kidney http://purl.obolibrary.org/obo/UBERON_0002113
T10 2317-2322 Body_part denotes liver http://purl.obolibrary.org/obo/UBERON_0002107
T11 2464-2470 Body_part denotes kidney http://purl.obolibrary.org/obo/UBERON_0002113
T12 2475-2480 Body_part denotes liver http://purl.obolibrary.org/obo/UBERON_0002107
T13 2766-2771 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T14 2992-2997 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178
T15 3085-3090 Body_part denotes liver http://purl.obolibrary.org/obo/UBERON_0002107
T16 3796-3801 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T17 3827-3831 Body_part denotes lobe http://purl.obolibrary.org/obo/UBERON_3010752
T18 3913-3917 Body_part denotes lobe http://purl.obolibrary.org/obo/UBERON_3010752
T19 4167-4172 Body_part denotes serum http://purl.obolibrary.org/obo/UBERON_0001977
T20 4551-4556 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T21 5038-5043 Body_part denotes Chest http://purl.obolibrary.org/obo/UBERON_0001443
T22 6348-6353 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T23 6354-6358 Body_part denotes tube http://purl.obolibrary.org/obo/UBERON_0000025
T24 6364-6369 Body_part denotes liver http://purl.obolibrary.org/obo/UBERON_0002107
T25 6386-6391 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178
T26 7351-7356 Body_part denotes organ http://purl.obolibrary.org/obo/UBERON_0000062
T27 7955-7961 Body_part denotes sputum http://purl.obolibrary.org/obo/UBERON_0007311
T28 8189-8194 Body_part denotes organ http://purl.obolibrary.org/obo/UBERON_0000062
T29 8335-8340 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178
T30 8423-8428 Body_part denotes Organ http://purl.obolibrary.org/obo/UBERON_0000062
T31 8676-8681 Body_part denotes Liver http://purl.obolibrary.org/obo/UBERON_0002107
T32 8946-8952 Body_part denotes Kidney http://purl.obolibrary.org/obo/UBERON_0002113
T33 9143-9154 Body_part denotes Bone marrow http://purl.obolibrary.org/obo/UBERON_0002371
T34 9207-9213 Body_part denotes Kidney http://purl.obolibrary.org/obo/UBERON_0002113
T35 9375-9381 Body_part denotes Kidney http://purl.obolibrary.org/obo/UBERON_0002113
T36 9576-9582 Body_part denotes Kidney http://purl.obolibrary.org/obo/UBERON_0002113
T37 9812-9818 Body_part denotes Kidney http://purl.obolibrary.org/obo/UBERON_0002113
T38 10016-10022 Body_part denotes Kidney http://purl.obolibrary.org/obo/UBERON_0002113
T39 10175-10180 Body_part denotes Liver http://purl.obolibrary.org/obo/UBERON_0002107
T40 10403-10409 Body_part denotes Kidney http://purl.obolibrary.org/obo/UBERON_0002113
T41 10625-10631 Body_part denotes Kidney http://purl.obolibrary.org/obo/UBERON_0002113
T42 10758-10764 Body_part denotes Kidney http://purl.obolibrary.org/obo/UBERON_0002113
T43 10922-10928 Body_part denotes Kidney http://purl.obolibrary.org/obo/UBERON_0002113
T44 11161-11167 Body_part denotes Kidney http://purl.obolibrary.org/obo/UBERON_0002113
T45 11343-11348 Body_part denotes organ http://purl.obolibrary.org/obo/UBERON_0000062
T46 11385-11391 Body_part denotes Kidney http://purl.obolibrary.org/obo/UBERON_0002113
T47 12109-12115 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T48 12240-12245 Body_part denotes serum http://purl.obolibrary.org/obo/UBERON_0001977
T49 13737-13742 Body_part denotes organ http://purl.obolibrary.org/obo/UBERON_0000062
T50 15057-15062 Body_part denotes serum http://purl.obolibrary.org/obo/UBERON_0001977
T51 15875-15880 Body_part denotes liver http://purl.obolibrary.org/obo/UBERON_0002107
T52 17736-17741 Body_part denotes organ http://purl.obolibrary.org/obo/UBERON_0000062
T53 18382-18387 Body_part denotes organ http://purl.obolibrary.org/obo/UBERON_0000062

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T1 28-47 Disease denotes respiratory failure http://purl.obolibrary.org/obo/MONDO_0021113
T2 70-79 Disease denotes COVID -19 http://purl.obolibrary.org/obo/MONDO_0100096
T3 80-89 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T4 276-284 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T5 443-451 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T6 523-531 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T7 576-584 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T8 696-704 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T9 879-914 Disease denotes Acute Respiratory Distress Syndrome http://purl.obolibrary.org/obo/MONDO_0006502
T10 885-914 Disease denotes Respiratory Distress Syndrome http://purl.obolibrary.org/obo/MONDO_0009971
T11 916-920 Disease denotes ARDS http://purl.obolibrary.org/obo/MONDO_0006502
T12 953-961 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T13 1164-1172 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T14 1368-1376 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T15 1441-1449 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T16 1453-1488 Disease denotes Acute Respiratory Distress Syndrome http://purl.obolibrary.org/obo/MONDO_0006502
T17 1459-1488 Disease denotes Respiratory Distress Syndrome http://purl.obolibrary.org/obo/MONDO_0009971
T18 1490-1494 Disease denotes ARDS http://purl.obolibrary.org/obo/MONDO_0006502
T19 1588-1592 Disease denotes ARDS http://purl.obolibrary.org/obo/MONDO_0006502
T20 1632-1644 Disease denotes inflammation http://purl.obolibrary.org/obo/MONDO_0021166
T21 1677-1685 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T22 1819-1827 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T23 2279-2287 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T24 2851-2860 Disease denotes influenza http://purl.obolibrary.org/obo/MONDO_0005812
T25 2865-2873 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T26 2970-2972 Disease denotes he http://purl.obolibrary.org/obo/MONDO_0017319
T27 3492-3494 Disease denotes he http://purl.obolibrary.org/obo/MONDO_0017319
T28 3691-3693 Disease denotes he http://purl.obolibrary.org/obo/MONDO_0017319
T29 3983-3994 Disease denotes pneumonitis http://purl.obolibrary.org/obo/MONDO_0043905
T30 4158-4166 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T31 4224-4232 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T32 4259-4261 Disease denotes he http://purl.obolibrary.org/obo/MONDO_0017319
T33 4618-4620 Disease denotes he http://purl.obolibrary.org/obo/MONDO_0017319
T34 5862-5871 Disease denotes Influenza http://purl.obolibrary.org/obo/MONDO_0005812
T35 5930-5932 Disease denotes he http://purl.obolibrary.org/obo/MONDO_0017319
T36 6165-6167 Disease denotes he http://purl.obolibrary.org/obo/MONDO_0017319
T37 6293-6295 Disease denotes he http://purl.obolibrary.org/obo/MONDO_0017319
T38 6320-6332 Disease denotes pneumothorax http://purl.obolibrary.org/obo/MONDO_0002076
T39 6466-6468 Disease denotes he http://purl.obolibrary.org/obo/MONDO_0017319
T40 6554-6573 Disease denotes bacterial infection http://purl.obolibrary.org/obo/MONDO_0005113
T41 6564-6573 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T42 6749-6761 Disease denotes pneumothorax http://purl.obolibrary.org/obo/MONDO_0002076
T43 6775-6777 Disease denotes he http://purl.obolibrary.org/obo/MONDO_0017319
T44 6837-6856 Disease denotes Respiratory Disease http://purl.obolibrary.org/obo/MONDO_0005087
T45 6860-6868 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T46 6884-6894 Disease denotes infectious http://purl.obolibrary.org/obo/MONDO_0005550
T47 7052-7060 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T48 8103-8111 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T49 8261-8269 Disease denotes COVID 19 http://purl.obolibrary.org/obo/MONDO_0100096
T50 8294-8297 Disease denotes MMF http://purl.obolibrary.org/obo/MONDO_0018942
T51 8970-8973 Disease denotes MMF http://purl.obolibrary.org/obo/MONDO_0018942
T52 9235-9238 Disease denotes MMF http://purl.obolibrary.org/obo/MONDO_0018942
T53 9403-9406 Disease denotes MMF http://purl.obolibrary.org/obo/MONDO_0018942
T54 9604-9607 Disease denotes MMF http://purl.obolibrary.org/obo/MONDO_0018942
T55 9840-9843 Disease denotes MMF http://purl.obolibrary.org/obo/MONDO_0018942
T56 10044-10047 Disease denotes MMF http://purl.obolibrary.org/obo/MONDO_0018942
T57 10098-10101 Disease denotes MMF http://purl.obolibrary.org/obo/MONDO_0018942
T58 10322-10333 Disease denotes lymphopenia http://purl.obolibrary.org/obo/MONDO_0003783
T59 10423-10426 Disease denotes MMF http://purl.obolibrary.org/obo/MONDO_0018942
T60 10512-10515 Disease denotes MMF http://purl.obolibrary.org/obo/MONDO_0018942
T61 10644-10647 Disease denotes MMF http://purl.obolibrary.org/obo/MONDO_0018942
T62 10659-10662 Disease denotes MMF http://purl.obolibrary.org/obo/MONDO_0018942
T63 10782-10785 Disease denotes MMF http://purl.obolibrary.org/obo/MONDO_0018942
T64 11168-11171 Disease denotes MMF http://purl.obolibrary.org/obo/MONDO_0018942
T65 11337-11356 Disease denotes multi-organ failure http://purl.obolibrary.org/obo/MONDO_0043726
T66 11403-11406 Disease denotes MMF http://purl.obolibrary.org/obo/MONDO_0018942
T67 11725-11733 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T68 11782-11790 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T69 11799-11834 Disease denotes acute respiratory distress syndrome http://purl.obolibrary.org/obo/MONDO_0006502
T70 11805-11834 Disease denotes respiratory distress syndrome http://purl.obolibrary.org/obo/MONDO_0009971
T71 11836-11840 Disease denotes ARDS http://purl.obolibrary.org/obo/MONDO_0006502
T72 11958-11969 Disease denotes lymphopenia http://purl.obolibrary.org/obo/MONDO_0003783
T73 12342-12350 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T74 13434-13445 Disease denotes lymphopenia http://purl.obolibrary.org/obo/MONDO_0003783
T75 13475-13483 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T76 13708-13716 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T77 14226-14234 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T78 15159-15167 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T79 15621-15625 Disease denotes ARDS http://purl.obolibrary.org/obo/MONDO_0006502
T80 15636-15640 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T81 15811-15815 Disease denotes ARDS http://purl.obolibrary.org/obo/MONDO_0006502
T82 15927-15935 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T83 16155-16163 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T84 16254-16262 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T85 16876-16884 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T86 16992-17000 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T87 17127-17129 Disease denotes he http://purl.obolibrary.org/obo/MONDO_0017319
T88 17690-17698 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T89 17968-17987 Disease denotes respiratory failure http://purl.obolibrary.org/obo/MONDO_0021113
T90 18237-18256 Disease denotes respiratory failure http://purl.obolibrary.org/obo/MONDO_0021113
T91 18353-18361 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T92 18471-18479 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T1 115-120 http://purl.obolibrary.org/obo/UBERON_0003103 denotes organ
T2 184-196 http://purl.obolibrary.org/obo/OBI_0000245 denotes Organization
T3 197-200 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T4 341-346 http://purl.obolibrary.org/obo/UBERON_0003103 denotes organ
T5 419-420 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T6 605-610 http://purl.obolibrary.org/obo/UBERON_0003103 denotes organ
T7 644-657 http://purl.obolibrary.org/obo/PR_000001393 denotes interleukin-6
T8 686-687 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T9 708-709 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T10 723-724 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T11 725-731 http://purl.obolibrary.org/obo/UBERON_0002113 denotes kidney
T12 725-731 http://www.ebi.ac.uk/efo/EFO_0000927 denotes kidney
T13 725-731 http://www.ebi.ac.uk/efo/EFO_0000929 denotes kidney
T14 736-741 http://purl.obolibrary.org/obo/UBERON_0002107 denotes liver
T15 736-741 http://www.ebi.ac.uk/efo/EFO_0000887 denotes liver
T16 1119-1131 http://purl.obolibrary.org/obo/OBI_0000245 denotes Organization
T17 1132-1135 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T18 1321-1324 http://purl.obolibrary.org/obo/CL_0000990 denotes CDC
T19 1393-1398 http://purl.obolibrary.org/obo/CLO_0001236 denotes 2]. A
T20 1615-1616 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T21 1657-1658 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T22 1720-1725 http://purl.obolibrary.org/obo/UBERON_0003103 denotes organ
T23 1754-1755 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T24 1795-1799 http://purl.obolibrary.org/obo/UBERON_0001456 denotes face
T25 1953-1957 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T26 2101-2114 http://purl.obolibrary.org/obo/PR_000001393 denotes interleukin-6
T27 2149-2153 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T28 2149-2153 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T29 2269-2270 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T30 2291-2292 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T31 2306-2312 http://purl.obolibrary.org/obo/UBERON_0002113 denotes kidney
T32 2306-2312 http://www.ebi.ac.uk/efo/EFO_0000927 denotes kidney
T33 2306-2312 http://www.ebi.ac.uk/efo/EFO_0000929 denotes kidney
T34 2317-2322 http://purl.obolibrary.org/obo/UBERON_0002107 denotes liver
T35 2317-2322 http://www.ebi.ac.uk/efo/EFO_0000887 denotes liver
T36 2383-2384 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T37 2445-2446 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T38 2459-2463 http://purl.obolibrary.org/obo/UBERON_0003101 denotes male
T39 2459-2463 http://www.ebi.ac.uk/efo/EFO_0000970 denotes male
T40 2464-2470 http://purl.obolibrary.org/obo/UBERON_0002113 denotes kidney
T41 2464-2470 http://www.ebi.ac.uk/efo/EFO_0000927 denotes kidney
T42 2464-2470 http://www.ebi.ac.uk/efo/EFO_0000929 denotes kidney
T43 2475-2480 http://purl.obolibrary.org/obo/UBERON_0002107 denotes liver
T44 2475-2480 http://www.ebi.ac.uk/efo/EFO_0000887 denotes liver
T45 2717-2718 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T46 2766-2771 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T47 2831-2837 http://purl.obolibrary.org/obo/UBERON_0000473 denotes tested
T48 2977-2978 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T49 2992-2997 http://www.ebi.ac.uk/efo/EFO_0000296 denotes blood
T50 2998-3002 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T51 3085-3090 http://purl.obolibrary.org/obo/UBERON_0002107 denotes liver
T52 3085-3090 http://www.ebi.ac.uk/efo/EFO_0000887 denotes liver
T53 3100-3105 http://purl.obolibrary.org/obo/UBERON_0000473 denotes tests
T54 3320-3321 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T55 3796-3801 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T56 3851-3857 http://www.ebi.ac.uk/efo/EFO_0000965 denotes Thorax
T57 3975-3976 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T58 4149-4153 http://purl.obolibrary.org/obo/UBERON_0000473 denotes Test
T59 4518-4520 http://purl.obolibrary.org/obo/CLO_0001527 denotes 94
T60 4551-4556 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T61 4834-4840 http://www.ebi.ac.uk/efo/EFO_0000965 denotes Thorax
T62 4903-4909 http://www.ebi.ac.uk/efo/EFO_0000965 denotes Thorax
T63 4972-4978 http://www.ebi.ac.uk/efo/EFO_0000965 denotes Thorax
T64 5038-5043 http://www.ebi.ac.uk/efo/EFO_0000965 denotes Chest
T65 5134-5138 http://purl.obolibrary.org/obo/UBERON_0000473 denotes Test
T66 5149-5151 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T67 5171-5174 http://purl.obolibrary.org/obo/CLO_0001302 denotes 3 4
T68 5227-5229 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T69 5260-5262 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T70 5318-5320 http://purl.obolibrary.org/obo/CLO_0053799 denotes 45
T71 5363-5367 http://purl.obolibrary.org/obo/UBERON_0003101 denotes Male
T72 5363-5367 http://www.ebi.ac.uk/efo/EFO_0000970 denotes Male
T73 5449-5451 http://purl.obolibrary.org/obo/CLO_0001302 denotes 34
T74 5458-5460 http://purl.obolibrary.org/obo/CLO_0050507 denotes 22
T75 5489-5491 http://purl.obolibrary.org/obo/CLO_0053799 denotes 45
T76 5501-5521 http://purl.obolibrary.org/obo/PR_000023540 denotes Alkaline phosphatase
T77 5566-5569 http://purl.obolibrary.org/obo/CLO_0001196 denotes 225
T78 5650-5652 http://purl.obolibrary.org/obo/CLO_0008426 denotes pg
T79 5749-5753 http://purl.obolibrary.org/obo/UBERON_0003101 denotes male
T80 5749-5753 http://www.ebi.ac.uk/efo/EFO_0000970 denotes male
T81 6038-6039 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T82 6177-6178 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T83 6306-6307 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T84 6346-6347 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T85 6348-6353 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T86 6354-6358 http://purl.obolibrary.org/obo/UBERON_0000025 denotes tube
T87 6364-6369 http://purl.obolibrary.org/obo/UBERON_0002107 denotes liver
T88 6364-6369 http://www.ebi.ac.uk/efo/EFO_0000887 denotes liver
T89 6379-6384 http://purl.obolibrary.org/obo/UBERON_0000473 denotes tests
T90 6386-6391 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood
T91 6386-6391 http://www.ebi.ac.uk/efo/EFO_0000296 denotes blood
T92 6635-6641 http://purl.obolibrary.org/obo/UBERON_0001969 denotes plasma
T93 6875-6876 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T94 7007-7019 http://purl.obolibrary.org/obo/OBI_0000245 denotes Organization
T95 7020-7023 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T96 7181-7184 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T97 7351-7356 http://purl.obolibrary.org/obo/UBERON_0003103 denotes organ
T98 8189-8194 http://purl.obolibrary.org/obo/UBERON_0003103 denotes organ
T99 8335-8340 http://www.ebi.ac.uk/efo/EFO_0000296 denotes blood
T100 8341-8345 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T101 8423-8428 http://purl.obolibrary.org/obo/UBERON_0003103 denotes Organ
T102 8549-8551 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T103 8577-8579 http://purl.obolibrary.org/obo/CLO_0053799 denotes 45
T104 8620-8623 http://purl.obolibrary.org/obo/CLO_0001196 denotes 225
T105 8676-8681 http://purl.obolibrary.org/obo/UBERON_0002107 denotes Liver
T106 8676-8681 http://www.ebi.ac.uk/efo/EFO_0000887 denotes Liver
T107 8816-8818 http://purl.obolibrary.org/obo/CLO_0001382 denotes 48
T108 8946-8952 http://purl.obolibrary.org/obo/UBERON_0002113 denotes Kidney
T109 8946-8952 http://www.ebi.ac.uk/efo/EFO_0000927 denotes Kidney
T110 8946-8952 http://www.ebi.ac.uk/efo/EFO_0000929 denotes Kidney
T111 9020-9025 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T112 9064-9069 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T113 9143-9147 http://purl.obolibrary.org/obo/UBERON_0002481 denotes Bone
T114 9207-9213 http://purl.obolibrary.org/obo/UBERON_0002113 denotes Kidney
T115 9207-9213 http://www.ebi.ac.uk/efo/EFO_0000927 denotes Kidney
T116 9207-9213 http://www.ebi.ac.uk/efo/EFO_0000929 denotes Kidney
T117 9375-9381 http://purl.obolibrary.org/obo/UBERON_0002113 denotes Kidney
T118 9375-9381 http://www.ebi.ac.uk/efo/EFO_0000927 denotes Kidney
T119 9375-9381 http://www.ebi.ac.uk/efo/EFO_0000929 denotes Kidney
T120 9576-9582 http://purl.obolibrary.org/obo/UBERON_0002113 denotes Kidney
T121 9576-9582 http://www.ebi.ac.uk/efo/EFO_0000927 denotes Kidney
T122 9576-9582 http://www.ebi.ac.uk/efo/EFO_0000929 denotes Kidney
T123 9796-9798 http://purl.obolibrary.org/obo/CLO_0050507 denotes 22
T124 9812-9818 http://purl.obolibrary.org/obo/UBERON_0002113 denotes Kidney
T125 9812-9818 http://www.ebi.ac.uk/efo/EFO_0000927 denotes Kidney
T126 9812-9818 http://www.ebi.ac.uk/efo/EFO_0000929 denotes Kidney
T127 10016-10022 http://purl.obolibrary.org/obo/UBERON_0002113 denotes Kidney
T128 10016-10022 http://www.ebi.ac.uk/efo/EFO_0000927 denotes Kidney
T129 10016-10022 http://www.ebi.ac.uk/efo/EFO_0000929 denotes Kidney
T130 10175-10180 http://purl.obolibrary.org/obo/UBERON_0002107 denotes Liver
T131 10175-10180 http://www.ebi.ac.uk/efo/EFO_0000887 denotes Liver
T132 10403-10409 http://purl.obolibrary.org/obo/UBERON_0002113 denotes Kidney
T133 10403-10409 http://www.ebi.ac.uk/efo/EFO_0000927 denotes Kidney
T134 10403-10409 http://www.ebi.ac.uk/efo/EFO_0000929 denotes Kidney
T135 10625-10631 http://purl.obolibrary.org/obo/UBERON_0002113 denotes Kidney
T136 10625-10631 http://www.ebi.ac.uk/efo/EFO_0000927 denotes Kidney
T137 10625-10631 http://www.ebi.ac.uk/efo/EFO_0000929 denotes Kidney
T138 10758-10764 http://purl.obolibrary.org/obo/UBERON_0002113 denotes Kidney
T139 10758-10764 http://www.ebi.ac.uk/efo/EFO_0000927 denotes Kidney
T140 10758-10764 http://www.ebi.ac.uk/efo/EFO_0000929 denotes Kidney
T141 10905-10907 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T142 10922-10928 http://purl.obolibrary.org/obo/UBERON_0002113 denotes Kidney
T143 10922-10928 http://www.ebi.ac.uk/efo/EFO_0000927 denotes Kidney
T144 10922-10928 http://www.ebi.ac.uk/efo/EFO_0000929 denotes Kidney
T145 11086-11090 http://purl.obolibrary.org/obo/CLO_0053704 denotes IL-8
T146 11161-11167 http://purl.obolibrary.org/obo/UBERON_0002113 denotes Kidney
T147 11161-11167 http://www.ebi.ac.uk/efo/EFO_0000927 denotes Kidney
T148 11161-11167 http://www.ebi.ac.uk/efo/EFO_0000929 denotes Kidney
T149 11343-11348 http://purl.obolibrary.org/obo/UBERON_0003103 denotes organ
T150 11376-11378 http://purl.obolibrary.org/obo/CLO_0050507 denotes 22
T151 11380-11382 http://purl.obolibrary.org/obo/CLO_0001407 denotes 52
T152 11385-11391 http://purl.obolibrary.org/obo/UBERON_0002113 denotes Kidney
T153 11385-11391 http://www.ebi.ac.uk/efo/EFO_0000927 denotes Kidney
T154 11385-11391 http://www.ebi.ac.uk/efo/EFO_0000929 denotes Kidney
T155 11576-11578 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T156 11603-11605 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T157 11627-11629 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T158 11662-11664 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T159 11742-11743 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T160 11916-11921 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T161 11998-12007 http://purl.obolibrary.org/obo/CLO_0001658 denotes activates
T162 12008-12009 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T163 12081-12082 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T164 12176-12187 http://purl.obolibrary.org/obo/CL_0000232 denotes erythrocyte
T165 12256-12270 http://purl.obolibrary.org/obo/PR_000001393 denotes interleukins 6
T166 12365-12378 http://purl.obolibrary.org/obo/PR_000001393 denotes Interleukin-6
T167 12389-12390 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T168 12498-12504 http://purl.obolibrary.org/obo/SO_0000418 denotes signal
T169 12560-12566 http://purl.obolibrary.org/obo/SO_0000418 denotes signal
T170 12587-12593 http://purl.obolibrary.org/obo/SO_0000418 denotes signal
T171 12632-12634 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T172 12651-12657 http://purl.obolibrary.org/obo/SO_0000418 denotes signal
T173 12718-12719 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T174 12764-12772 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membrane
T175 12834-12836 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T176 12849-12855 http://purl.obolibrary.org/obo/SO_0000418 denotes signal
T177 12924-12925 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T178 12971-12979 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membrane
T179 13022-13028 http://purl.obolibrary.org/obo/SO_0000418 denotes signal
T180 13043-13045 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T181 13071-13077 http://purl.obolibrary.org/obo/SO_0000418 denotes signal
T182 13102-13103 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T183 13158-13166 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membrane
T184 13235-13244 http://purl.obolibrary.org/obo/CLO_0001658 denotes activated
T185 13246-13248 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T186 13272-13273 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T187 13284-13286 http://purl.obolibrary.org/obo/CLO_0001382 denotes 48
T188 13400-13401 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T189 13607-13608 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T190 13737-13742 http://purl.obolibrary.org/obo/UBERON_0003103 denotes organ
T191 13770-13771 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T192 13867-13868 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T193 13922-13925 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T194 13951-13953 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T195 14034-14043 http://purl.obolibrary.org/obo/SO_0000418 denotes signaling
T196 14064-14065 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T197 14137-14139 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T198 14252-14253 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T199 14268-14271 http://purl.obolibrary.org/obo/CLO_0001382 denotes 4−8
T200 14352-14353 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T201 14478-14479 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T202 14834-14835 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T203 15191-15192 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T204 15503-15504 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T205 15658-15659 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T206 15682-15684 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T207 15849-15851 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T208 15873-15874 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T209 15875-15880 http://purl.obolibrary.org/obo/UBERON_0002107 denotes liver
T210 15875-15880 http://www.ebi.ac.uk/efo/EFO_0000887 denotes liver
T211 15907-15913 http://purl.obolibrary.org/obo/UBERON_0000473 denotes tested
T212 16361-16367 http://purl.obolibrary.org/obo/SO_0000418 denotes signal
T213 16393-16394 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T214 16495-16496 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T215 16918-16923 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T216 17022-17023 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T217 17047-17048 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T218 17169-17170 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T219 17417-17418 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T220 17736-17741 http://purl.obolibrary.org/obo/UBERON_0003103 denotes organ
T221 17899-17900 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T222 18024-18025 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T223 18107-18108 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T224 18227-18228 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T225 18258-18259 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T226 18382-18387 http://purl.obolibrary.org/obo/UBERON_0003103 denotes organ

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T1 13-24 Chemical denotes tocilizumab http://purl.obolibrary.org/obo/CHEBI_64360
T2 628-639 Chemical denotes tocilizumab http://purl.obolibrary.org/obo/CHEBI_64360
T3 659-661 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T5 665-674 Chemical denotes inhibitor http://purl.obolibrary.org/obo/CHEBI_35222
T6 782-793 Chemical denotes tocilizumab http://purl.obolibrary.org/obo/CHEBI_64360
T7 2116-2118 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T9 2211-2213 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T11 2216-2225 Chemical denotes inhibitor http://purl.obolibrary.org/obo/CHEBI_35222
T12 2226-2231 Chemical denotes drugs http://purl.obolibrary.org/obo/CHEBI_23888
T13 2357-2359 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T15 2362-2371 Chemical denotes inhibitor http://purl.obolibrary.org/obo/CHEBI_35222
T16 2459-2463 Chemical denotes male http://purl.obolibrary.org/obo/CHEBI_30780
T17 2545-2547 Chemical denotes ED http://purl.obolibrary.org/obo/CHEBI_73503
T18 2745-2752 Chemical denotes Celsius http://purl.obolibrary.org/obo/CHEBI_145500
T19 3180-3197 Chemical denotes immunosuppressant http://purl.obolibrary.org/obo/CHEBI_35705
T20 3219-3236 Chemical denotes mycophenolic acid http://purl.obolibrary.org/obo/CHEBI_168396
T21 3232-3236 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T22 3259-3269 Chemical denotes prednisone http://purl.obolibrary.org/obo/CHEBI_8382
T23 3290-3300 Chemical denotes tacrolimus http://purl.obolibrary.org/obo/CHEBI_61049|http://purl.obolibrary.org/obo/CHEBI_61057
T25 3389-3399 Chemical denotes prednisone http://purl.obolibrary.org/obo/CHEBI_8382
T26 3403-3421 Chemical denotes methylprednisolone http://purl.obolibrary.org/obo/CHEBI_6888
T27 3504-3512 Chemical denotes cefepime http://purl.obolibrary.org/obo/CHEBI_478164
T28 3564-3582 Chemical denotes hydroxychloroquine http://purl.obolibrary.org/obo/CHEBI_5801
T29 4283-4294 Chemical denotes tocilizumab http://purl.obolibrary.org/obo/CHEBI_64360
T30 4400-4406 Chemical denotes oxygen http://purl.obolibrary.org/obo/CHEBI_25805
T31 4494-4500 Chemical denotes oxygen http://purl.obolibrary.org/obo/CHEBI_25805
T32 4679-4683 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T33 4688-4698 Chemical denotes tacrolimus http://purl.obolibrary.org/obo/CHEBI_61049|http://purl.obolibrary.org/obo/CHEBI_61057
T35 5352-5362 Chemical denotes Creatinine http://purl.obolibrary.org/obo/CHEBI_16737
T36 5421-5424 Chemical denotes AST http://purl.obolibrary.org/obo/CHEBI_76649
T37 5604-5611 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T38 5640-5642 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T40 5680-5687 Chemical denotes Prograf http://purl.obolibrary.org/obo/CHEBI_61049|http://purl.obolibrary.org/obo/CHEBI_61057
T42 5689-5699 Chemical denotes Tacrolimus http://purl.obolibrary.org/obo/CHEBI_61049
T43 5740-5748 Chemical denotes Ferritin http://purl.obolibrary.org/obo/CHEBI_82594
T44 5749-5753 Chemical denotes male http://purl.obolibrary.org/obo/CHEBI_30780
T45 6067-6073 Chemical denotes oxygen http://purl.obolibrary.org/obo/CHEBI_25805
T46 6136-6142 Chemical denotes oxygen http://purl.obolibrary.org/obo/CHEBI_25805
T47 6194-6205 Chemical denotes tocilizumab http://purl.obolibrary.org/obo/CHEBI_64360
T48 6392-6396 Chemical denotes urea http://purl.obolibrary.org/obo/CHEBI_16199
T49 6397-6405 Chemical denotes nitrogen http://purl.obolibrary.org/obo/CHEBI_25555
T50 6417-6427 Chemical denotes creatinine http://purl.obolibrary.org/obo/CHEBI_16737
T51 7462-7479 Chemical denotes immunosuppressant http://purl.obolibrary.org/obo/CHEBI_35705
T52 8294-8297 Chemical denotes MMF http://purl.obolibrary.org/obo/CHEBI_8764
T53 8300-8313 Chemical denotes Mycophenolate http://purl.obolibrary.org/obo/CHEBI_168396
T54 8370-8377 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T55 8385-8392 Chemical denotes lactate http://purl.obolibrary.org/obo/CHEBI_24996
T56 8529-8531 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T58 8682-8692 Chemical denotes Tacrolimus http://purl.obolibrary.org/obo/CHEBI_61049
T59 8693-8715 Chemical denotes Oseltamivir, phosphate http://purl.obolibrary.org/obo/CHEBI_7799
T60 8693-8704 Chemical denotes Oseltamivir http://purl.obolibrary.org/obo/CHEBI_7798
T61 8706-8715 Chemical denotes phosphate http://purl.obolibrary.org/obo/CHEBI_18367|http://purl.obolibrary.org/obo/CHEBI_26020|http://purl.obolibrary.org/obo/CHEBI_35780|http://purl.obolibrary.org/obo/CHEBI_43474
T65 8748-8754 Chemical denotes sodium http://purl.obolibrary.org/obo/CHEBI_26708
T66 8894-8904 Chemical denotes tacrolimus http://purl.obolibrary.org/obo/CHEBI_61049|http://purl.obolibrary.org/obo/CHEBI_61057
T68 8959-8969 Chemical denotes Tacrolimus http://purl.obolibrary.org/obo/CHEBI_61049
T69 8970-8973 Chemical denotes MMF http://purl.obolibrary.org/obo/CHEBI_8764
T70 8974-8985 Chemical denotes Oseltamivir http://purl.obolibrary.org/obo/CHEBI_7798
T71 8994-9006 Chemical denotes moxifloxacin http://purl.obolibrary.org/obo/CHEBI_63611
T72 9026-9036 Chemical denotes interferon http://purl.obolibrary.org/obo/CHEBI_52999
T73 9037-9042 Chemical denotes alpha http://purl.obolibrary.org/obo/CHEBI_30216
T74 9044-9062 Chemical denotes methylprednisolone http://purl.obolibrary.org/obo/CHEBI_6888
T75 9235-9238 Chemical denotes MMF http://purl.obolibrary.org/obo/CHEBI_8764
T76 9239-9249 Chemical denotes Tacrolimus http://purl.obolibrary.org/obo/CHEBI_61049
T77 9250-9261 Chemical denotes Oseltamivir http://purl.obolibrary.org/obo/CHEBI_7798
T78 9263-9270 Chemical denotes arbidol http://purl.obolibrary.org/obo/CHEBI_134730
T79 9403-9406 Chemical denotes MMF http://purl.obolibrary.org/obo/CHEBI_8764
T80 9407-9416 Chemical denotes rapamycin http://purl.obolibrary.org/obo/CHEBI_9168
T81 9417-9428 Chemical denotes Oseltamivir http://purl.obolibrary.org/obo/CHEBI_7798
T82 9432-9439 Chemical denotes arbidol http://purl.obolibrary.org/obo/CHEBI_134730
T83 9440-9448 Chemical denotes cefepime http://purl.obolibrary.org/obo/CHEBI_478164
T84 9604-9607 Chemical denotes MMF http://purl.obolibrary.org/obo/CHEBI_8764
T85 9608-9618 Chemical denotes Tacrolimus http://purl.obolibrary.org/obo/CHEBI_61049
T86 9619-9630 Chemical denotes Oseltamivir http://purl.obolibrary.org/obo/CHEBI_7798
T87 9634-9641 Chemical denotes arbidol http://purl.obolibrary.org/obo/CHEBI_134730
T88 9840-9843 Chemical denotes MMF http://purl.obolibrary.org/obo/CHEBI_8764
T89 9844-9854 Chemical denotes Tacrolimus http://purl.obolibrary.org/obo/CHEBI_61049
T90 9855-9866 Chemical denotes Oseltamivir http://purl.obolibrary.org/obo/CHEBI_7798
T91 9870-9877 Chemical denotes arbidol http://purl.obolibrary.org/obo/CHEBI_134730
T92 10044-10047 Chemical denotes MMF http://purl.obolibrary.org/obo/CHEBI_8764
T93 10048-10058 Chemical denotes Tacrolimus http://purl.obolibrary.org/obo/CHEBI_61049
T94 10059-10070 Chemical denotes Oseltamivir http://purl.obolibrary.org/obo/CHEBI_7798
T95 10074-10081 Chemical denotes arbidol http://purl.obolibrary.org/obo/CHEBI_134730
T96 10098-10101 Chemical denotes MMF http://purl.obolibrary.org/obo/CHEBI_8764
T97 10102-10112 Chemical denotes Tacrolimus http://purl.obolibrary.org/obo/CHEBI_61049
T98 10181-10191 Chemical denotes Tacrolimus http://purl.obolibrary.org/obo/CHEBI_61049
T99 10224-10233 Chemical denotes Lopinavir http://purl.obolibrary.org/obo/CHEBI_31781
T100 10234-10243 Chemical denotes ritonavir http://purl.obolibrary.org/obo/CHEBI_45409
T101 10249-10261 Chemical denotes Cefoperazone http://purl.obolibrary.org/obo/CHEBI_3493
T102 10263-10268 Chemical denotes alpha http://purl.obolibrary.org/obo/CHEBI_30216
T103 10410-10422 Chemical denotes Cyclosporine http://purl.obolibrary.org/obo/CHEBI_4031
T104 10423-10426 Chemical denotes MMF http://purl.obolibrary.org/obo/CHEBI_8764
T105 10438-10447 Chemical denotes Lopinavir http://purl.obolibrary.org/obo/CHEBI_31781
T106 10449-10458 Chemical denotes ritonavir http://purl.obolibrary.org/obo/CHEBI_45409
T107 10460-10469 Chemical denotes ribavirin http://purl.obolibrary.org/obo/CHEBI_63580
T108 10471-10481 Chemical denotes interferon http://purl.obolibrary.org/obo/CHEBI_52999
T109 10482-10487 Chemical denotes alpha http://purl.obolibrary.org/obo/CHEBI_30216
T110 10492-10510 Chemical denotes methylprednisolone http://purl.obolibrary.org/obo/CHEBI_6888
T111 10512-10515 Chemical denotes MMF http://purl.obolibrary.org/obo/CHEBI_8764
T112 10644-10647 Chemical denotes MMF http://purl.obolibrary.org/obo/CHEBI_8764
T113 10648-10658 Chemical denotes Tacrolimus http://purl.obolibrary.org/obo/CHEBI_61049
T114 10659-10662 Chemical denotes MMF http://purl.obolibrary.org/obo/CHEBI_8764
T115 10664-10674 Chemical denotes Tacrolimus http://purl.obolibrary.org/obo/CHEBI_61049
T116 10675-10686 Chemical denotes ceftriaxone http://purl.obolibrary.org/obo/CHEBI_29007
T117 10782-10785 Chemical denotes MMF http://purl.obolibrary.org/obo/CHEBI_8764
T118 10941-10951 Chemical denotes Tacrolimus http://purl.obolibrary.org/obo/CHEBI_61049
T119 10992-11001 Chemical denotes ritonavir http://purl.obolibrary.org/obo/CHEBI_45409
T120 11003-11014 Chemical denotes ceftriaxone http://purl.obolibrary.org/obo/CHEBI_29007
T121 11016-11026 Chemical denotes tacrolimus http://purl.obolibrary.org/obo/CHEBI_61049|http://purl.obolibrary.org/obo/CHEBI_61057
T123 11086-11088 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T125 11168-11171 Chemical denotes MMF http://purl.obolibrary.org/obo/CHEBI_8764
T126 11392-11402 Chemical denotes Tacrolimus http://purl.obolibrary.org/obo/CHEBI_61049
T127 11403-11406 Chemical denotes MMF http://purl.obolibrary.org/obo/CHEBI_8764
T128 11428-11440 Chemical denotes Moxifloxacin http://purl.obolibrary.org/obo/CHEBI_63611
T129 11461-11469 Chemical denotes Biapenem http://purl.obolibrary.org/obo/CHEBI_3089
T130 11471-11481 Chemical denotes interferon http://purl.obolibrary.org/obo/CHEBI_52999
T131 11491-11515 Chemical denotes immunosuppressive agents http://purl.obolibrary.org/obo/CHEBI_35705
T132 11887-11896 Chemical denotes antiviral http://purl.obolibrary.org/obo/CHEBI_22587
T133 11930-11940 Chemical denotes interferon http://purl.obolibrary.org/obo/CHEBI_52999
T134 12225-12232 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T135 12256-12268 Chemical denotes interleukins http://purl.obolibrary.org/obo/CHEBI_52998
T136 12380-12382 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T138 12493-12495 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T140 12680-12682 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T142 12700-12702 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T144 12889-12891 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T146 13195-13198 Chemical denotes RAS http://purl.obolibrary.org/obo/CHEBI_63620
T147 13321-13323 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T149 13460-13462 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T151 13565-13567 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T153 13693-13695 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T155 13854-13865 Chemical denotes tocilizumab http://purl.obolibrary.org/obo/CHEBI_64360
T156 13907-13909 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T158 13974-13976 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T160 13981-13992 Chemical denotes tocilizumab http://purl.obolibrary.org/obo/CHEBI_64360
T161 14521-14532 Chemical denotes tocilizumab http://purl.obolibrary.org/obo/CHEBI_64360
T162 14656-14665 Chemical denotes lopinavir http://purl.obolibrary.org/obo/CHEBI_31781
T163 14667-14685 Chemical denotes methylprednisolone http://purl.obolibrary.org/obo/CHEBI_6888
T164 14716-14722 Chemical denotes oxygen http://purl.obolibrary.org/obo/CHEBI_25805
T165 14953-14955 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T167 14968-14981 Chemical denotes metronidazole http://purl.obolibrary.org/obo/CHEBI_6909
T168 15033-15046 Chemical denotes metronidazole http://purl.obolibrary.org/obo/CHEBI_6909
T169 15063-15065 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T171 15726-15735 Chemical denotes antiviral http://purl.obolibrary.org/obo/CHEBI_22587
T172 16081-16083 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T174 16220-16222 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T176 16356-16358 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T178 16600-16602 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T180 16638-16648 Chemical denotes tacrolimus http://purl.obolibrary.org/obo/CHEBI_61049|http://purl.obolibrary.org/obo/CHEBI_61057
T182 17240-17242 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T184 17491-17502 Chemical denotes tocilizumab http://purl.obolibrary.org/obo/CHEBI_64360
T185 17766-17768 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T187 17771-17780 Chemical denotes inhibitor http://purl.obolibrary.org/obo/CHEBI_35222
T188 17880-17891 Chemical denotes tocilizumab http://purl.obolibrary.org/obo/CHEBI_64360

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
3 13-24 Chemical denotes tocilizumab MESH:C502936
4 28-47 Disease denotes respiratory failure MESH:D012131
5 70-89 Disease denotes COVID -19 pneumonia MESH:C000657245
23 644-657 Gene denotes interleukin-6 Gene:3569
24 659-663 Gene denotes IL-6 Gene:3569
25 452-460 Species denotes patients Tax:9606
26 585-593 Species denotes patients Tax:9606
27 710-717 Species denotes patient Tax:9606
28 628-639 Chemical denotes tocilizumab MESH:C502936
29 782-793 Chemical denotes tocilizumab MESH:C502936
30 249-274 Disease denotes novel Coronavirus Disease MESH:C000657245
31 276-284 Disease denotes COVID-19 MESH:C000657245
32 313-319 Disease denotes deaths MESH:D003643
33 443-451 Disease denotes COVID-19 MESH:C000657245
34 523-531 Disease denotes COVID-19 MESH:C000657245
35 576-584 Disease denotes COVID-19 MESH:C000657245
36 696-704 Disease denotes COVID-19 MESH:C000657245
37 879-914 Disease denotes Acute Respiratory Distress Syndrome MESH:D012128
38 916-920 Disease denotes ARDS MESH:D012128
39 953-961 Disease denotes COVID-19 MESH:C000657245
61 2101-2114 Gene denotes interleukin-6 Gene:3569
62 2116-2120 Gene denotes IL-6 Gene:3569
63 2211-2215 Gene denotes IL-6 Gene:3569
64 2357-2361 Gene denotes IL-6 Gene:3569
65 1244-1261 Species denotes novel Coronavirus Tax:2697049
66 1686-1694 Species denotes patients Tax:9606
67 1778-1786 Species denotes patients Tax:9606
68 2293-2300 Species denotes patient Tax:9606
69 1164-1172 Disease denotes COVID-19 MESH:C000657245
70 1195-1201 Disease denotes deaths MESH:D003643
71 1368-1376 Disease denotes COVID-19 MESH:C000657245
72 1385-1391 Disease denotes deaths MESH:D003643
73 1441-1449 Disease denotes COVID-19 MESH:C000657245
74 1459-1488 Disease denotes Respiratory Distress Syndrome MESH:D012128
75 1490-1494 Disease denotes ARDS MESH:D012128
76 1588-1592 Disease denotes ARDS MESH:D012128
77 1626-1644 Disease denotes hyper-inflammation MESH:D007249
78 1677-1685 Disease denotes COVID-19 MESH:C000657245
79 1819-1827 Disease denotes COVID-19 MESH:C000657245
80 2035-2040 Disease denotes COVID MESH:C000657245
81 2279-2287 Disease denotes COVID-19 MESH:C000657245
92 2434-2441 Species denotes patient Tax:9606
93 3219-3236 Chemical denotes mycophenolic acid MESH:D009173
94 3259-3269 Chemical denotes prednisone MESH:D011241
95 3290-3300 Chemical denotes tacrolimus MESH:D016559
96 2459-2470 Disease denotes male kidney MESH:D018567
97 2583-2588 Disease denotes fever MESH:D005334
98 2590-2609 Disease denotes shortness of breath MESH:D004417
99 2615-2620 Disease denotes cough MESH:D003371
100 2745-2752 Disease denotes Celsius
101 2865-2873 Disease denotes COVID-19 MESH:C000657245
107 3358-3365 Species denotes patient Tax:9606
108 3389-3399 Chemical denotes prednisone MESH:D011241
109 3403-3421 Chemical denotes methylprednisolone MESH:D008775
110 3504-3512 Chemical denotes cefepime MESH:D000077723
111 3564-3582 Chemical denotes hydroxychloroquine MESH:D006886
116 5593-5611 Gene denotes C-reactive protein Gene:1401
117 5640-5644 Gene denotes IL-6 Gene:3569
118 5881-5892 Species denotes Coronavirus Tax:11118
119 5352-5362 Chemical denotes Creatinine MESH:D003404
121 5096-5103 Species denotes Patient Tax:9606
134 4765-4772 Species denotes patient Tax:9606
135 4283-4294 Chemical denotes tocilizumab MESH:C502936
136 4400-4406 Chemical denotes oxygen MESH:D010100
137 4494-4500 Chemical denotes oxygen MESH:D010100
138 4666-4683 Chemical denotes Mycophenolic acid MESH:D009173
139 4688-4698 Chemical denotes tacrolimus MESH:D016559
140 3625-3630 Disease denotes fever MESH:D005334
141 3715-3734 Disease denotes shortness of breath MESH:D004417
142 3977-3994 Disease denotes viral pneumonitis
143 4158-4166 Disease denotes COVID-19 MESH:C000657245
144 4224-4232 Disease denotes COVID-19 MESH:C000657245
145 4356-4375 Disease denotes shortness of breath MESH:D004417
149 6067-6073 Chemical denotes oxygen MESH:D010100
150 6136-6142 Chemical denotes oxygen MESH:D010100
151 6194-6205 Chemical denotes tocilizumab MESH:C502936
159 6211-6218 Species denotes patient Tax:9606
160 6392-6396 Chemical denotes urea MESH:D014508
161 6397-6405 Chemical denotes nitrogen MESH:D009584
162 6417-6427 Chemical denotes creatinine MESH:D003404
163 6228-6242 Disease denotes critically ill MESH:D016638
164 6320-6332 Disease denotes pneumothorax MESH:D011030
165 6554-6573 Disease denotes bacterial infection MESH:D001424
167 6749-6761 Disease denotes pneumothorax MESH:D011030
196 8529-8533 Gene denotes IL-6 Gene:3569
197 8583-8586 Gene denotes CRP Gene:1401
198 10471-10490 Gene denotes interferon alpha-2b Gene:3440
199 11086-11090 Gene denotes IL-8 Gene:3576
200 9020-9025 Species denotes human Tax:9606
201 9064-9069 Species denotes human Tax:9606
202 10224-10243 Chemical denotes Lopinavir/ritonavir MESH:C558899
203 10438-10447 Chemical denotes Lopinavir MESH:D061466
204 10786-10796 Chemical denotes Prednisone MESH:D011241
205 10797-10832 Chemical denotes BelataceptCyclosporinePrednisoneMMF
206 10941-10951 Chemical denotes Tacrolimus MESH:D016559
207 10952-10981 Chemical denotes Prednisone Hydroxychloroquine
208 10983-11001 Chemical denotes opinavir/ritonavir
209 11003-11014 Chemical denotes ceftriaxone MESH:D002443
210 11016-11026 Chemical denotes tacrolimus MESH:D016559
211 11028-11046 Chemical denotes methlyprednisolone
212 11172-11204 Chemical denotes Prednisone MethylprednisoloneMMF
213 11392-11402 Chemical denotes Tacrolimus MESH:D016559
214 11407-11417 Chemical denotes Prednisone MESH:D011241
215 11418-11426 Chemical denotes Imifovir
216 11428-11440 Chemical denotes Moxifloxacin MESH:D000077266
217 11441-11459 Chemical denotes Methylprednisolone MESH:D008775
218 11461-11469 Chemical denotes Biapenem MESH:C065257
219 8655-8662 Disease denotes Illness MESH:D002908
220 10322-10333 Disease denotes lymphopenia MESH:D008231
221 11161-11171 Disease denotes Kidney MMF MESH:D007674
222 11324-11329 Disease denotes death MESH:D003643
223 11337-11356 Disease denotes multi-organ failure MESH:D009102
229 8353-8356 Gene denotes CRP Gene:1401
230 8359-8377 Gene denotes C-reactive protein Gene:1401
231 8284-8292 Species denotes patients Tax:9606
232 8300-8321 Chemical denotes Mycophenolate Mofetil MESH:D009173
233 8261-8269 Disease denotes COVID 19 MESH:C000657245
255 6860-6870 Species denotes SARS-CoV-2 Tax:2697049
256 6896-6913 Species denotes novel coronavirus Tax:2697049
257 7132-7149 Species denotes novel Coronavirus Tax:2697049
258 7212-7220 Species denotes patients Tax:9606
259 7374-7382 Species denotes patients Tax:9606
260 7518-7526 Species denotes patients Tax:9606
261 7670-7678 Species denotes patients Tax:9606
262 7859-7867 Species denotes patients Tax:9606
263 8013-8021 Species denotes patients Tax:9606
264 8162-8170 Species denotes patients Tax:9606
265 6824-6856 Disease denotes Severe Acute Respiratory Disease MESH:D045169
266 7052-7060 Disease denotes COVID-19 MESH:C000657245
267 7083-7089 Disease denotes deaths MESH:D003643
268 7255-7264 Disease denotes mortality MESH:D003643
269 7636-7644 Disease denotes Covid-19 MESH:C000657245
270 7734-7739 Disease denotes fever MESH:D005334
271 7920-7925 Disease denotes fever MESH:D005334
272 7927-7932 Disease denotes cough MESH:D003371
273 7934-7941 Disease denotes myalgia MESH:D063806
274 7942-7949 Disease denotes fatigue MESH:D005221
275 8103-8111 Disease denotes COVID-19 MESH:C000657245
288 12214-12232 Gene denotes C-reactive protein Gene:1401
289 12234-12237 Gene denotes CRP Gene:1401
290 12365-12378 Gene denotes Interleukin-6 Gene:3569
291 12380-12384 Gene denotes IL-6 Gene:3569
292 12351-12359 Species denotes patients Tax:9606
293 11725-11733 Disease denotes COVID-19 MESH:C000657245
294 11782-11790 Disease denotes COVID-19 MESH:C000657245
295 11799-11834 Disease denotes acute respiratory distress syndrome MESH:D012128
296 11836-11840 Disease denotes ARDS MESH:D012128
297 11852-11860 Disease denotes infected MESH:D007239
298 11958-11969 Disease denotes lymphopenia MESH:D008231
299 12342-12350 Disease denotes COVID-19 MESH:C000657245
311 12493-12497 Gene denotes IL-6 Gene:3569
312 12680-12684 Gene denotes IL-6 Gene:3569
313 12700-12705 Gene denotes IL-6R Gene:3570
314 12733-12736 Gene denotes IL6 Gene:3569
315 12737-12741 Gene denotes IL6R Gene:3570
316 12773-12778 Gene denotes gp130 Gene:3572
317 12889-12893 Gene denotes IL-6 Gene:3569
318 12939-12942 Gene denotes IL6 Gene:3569
319 12980-12985 Gene denotes gp130 Gene:3572
320 13135-13138 Gene denotes sIL Gene:6491
321 13173-13178 Gene denotes gp130 Gene:3572
331 13321-13325 Gene denotes IL-6 Gene:3569
332 13460-13464 Gene denotes IL-6 Gene:3569
333 13565-13569 Gene denotes IL-6 Gene:3569
334 13693-13697 Gene denotes IL-6 Gene:3569
335 13287-13295 Species denotes patients Tax:9606
336 13717-13725 Species denotes patients Tax:9606
337 13434-13445 Disease denotes lymphopenia MESH:D008231
338 13475-13483 Disease denotes COVID-19 MESH:C000657245
339 13708-13716 Disease denotes COVID-19 MESH:C000657245
343 13974-13979 Gene denotes IL-6R Gene:3570
344 13854-13865 Chemical denotes tocilizumab MESH:C502936
345 13981-13992 Chemical denotes tocilizumab MESH:C502936
357 14953-14957 Gene denotes IL-6 Gene:3569
358 15063-15067 Gene denotes IL-6 Gene:3569
359 14498-14506 Species denotes patients Tax:9606
360 14521-14532 Chemical denotes tocilizumab MESH:C502936
361 14656-14665 Chemical denotes lopinavir MESH:D061466
362 14667-14685 Chemical denotes methylprednisolone MESH:D008775
363 14716-14722 Chemical denotes oxygen MESH:D010100
364 14968-14981 Chemical denotes metronidazole MESH:D008795
365 15033-15046 Chemical denotes metronidazole MESH:D008795
366 14226-14234 Disease denotes COVID-19 MESH:C000657245
367 14623-14631 Disease denotes Covid-19 MESH:C000657245
378 16081-16085 Gene denotes IL-6 Gene:3569
379 15543-15551 Species denotes patients Tax:9606
380 15641-15649 Species denotes patients Tax:9606
381 15145-15153 Disease denotes infected MESH:D007239
382 15159-15167 Disease denotes COVID-19 MESH:C000657245
383 15621-15625 Disease denotes ARDS MESH:D012128
384 15636-15640 Disease denotes SARS MESH:D045169
385 15811-15815 Disease denotes ARDS MESH:D012128
386 15927-15935 Disease denotes COVID-19 MESH:C000657245
387 16155-16163 Disease denotes COVID-19 MESH:C000657245
396 16220-16224 Gene denotes IL-6 Gene:3569
397 16356-16360 Gene denotes IL-6 Gene:3569
398 16600-16604 Gene denotes IL-6 Gene:3569
399 16432-16440 Species denotes patients Tax:9606
400 16553-16561 Species denotes patients Tax:9606
401 16638-16648 Chemical denotes tacrolimus MESH:D016559
402 16254-16262 Disease denotes COVID-19 MESH:C000657245
403 16876-16884 Disease denotes COVID-19 MESH:C000657245
412 17240-17244 Gene denotes IL-6 Gene:3569
413 16978-16986 Species denotes patients Tax:9606
414 17096-17103 Species denotes patient Tax:9606
415 17378-17386 Species denotes patients Tax:9606
416 17491-17502 Chemical denotes tocilizumab MESH:C502936
417 16992-17000 Disease denotes COVID-19 MESH:C000657245
418 17185-17205 Disease denotes respiratory distress MESH:D012128
419 17403-17410 Disease denotes hypoxic MESH:D000860
434 17766-17770 Gene denotes IL-6 Gene:3569
435 17699-17707 Species denotes patients Tax:9606
436 17788-17795 Species denotes patient Tax:9606
437 17932-17939 Species denotes patient Tax:9606
438 18046-18054 Species denotes patients Tax:9606
439 18362-18370 Species denotes patients Tax:9606
440 17880-17891 Chemical denotes tocilizumab MESH:C502936
441 17690-17698 Disease denotes COVID-19 MESH:C000657245
442 17968-17987 Disease denotes respiratory failure MESH:D012131
443 18145-18165 Disease denotes respiratory distress MESH:D012128
444 18182-18206 Disease denotes Thromboembolic phenomena MESH:D013923
445 18237-18256 Disease denotes respiratory failure MESH:D012131
446 18353-18361 Disease denotes COVID-19 MESH:C000657245
447 18471-18479 Disease denotes COVID-19 MESH:C000657245

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T1 28-47 Phenotype denotes respiratory failure http://purl.obolibrary.org/obo/HP_0002878
T2 80-89 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T3 809-823 Phenotype denotes cytokine storm http://purl.obolibrary.org/obo/HP_0033041
T4 885-905 Phenotype denotes Respiratory Distress http://purl.obolibrary.org/obo/HP_0002098
T5 1459-1479 Phenotype denotes Respiratory Distress http://purl.obolibrary.org/obo/HP_0002098
T6 1659-1673 Phenotype denotes cytokine storm http://purl.obolibrary.org/obo/HP_0033041
T7 2385-2399 Phenotype denotes cytokine storm http://purl.obolibrary.org/obo/HP_0033041
T8 2578-2588 Phenotype denotes mild fever http://purl.obolibrary.org/obo/HP_0011134
T9 2590-2609 Phenotype denotes shortness of breath http://purl.obolibrary.org/obo/HP_0002098
T10 2615-2620 Phenotype denotes cough http://purl.obolibrary.org/obo/HP_0012735
T11 3625-3630 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T12 3715-3734 Phenotype denotes shortness of breath http://purl.obolibrary.org/obo/HP_0002098
T13 4356-4375 Phenotype denotes shortness of breath http://purl.obolibrary.org/obo/HP_0002098
T14 6320-6332 Phenotype denotes pneumothorax http://purl.obolibrary.org/obo/HP_0002107
T15 6749-6761 Phenotype denotes pneumothorax http://purl.obolibrary.org/obo/HP_0002107
T16 7734-7739 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T17 7920-7925 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T18 7927-7932 Phenotype denotes cough http://purl.obolibrary.org/obo/HP_0012735
T19 7934-7941 Phenotype denotes myalgia http://purl.obolibrary.org/obo/HP_0003326
T20 7942-7949 Phenotype denotes fatigue http://purl.obolibrary.org/obo/HP_0012378
T21 8038-8058 Phenotype denotes abdominal discomfort http://purl.obolibrary.org/obo/HP_0002027
T22 10322-10333 Phenotype denotes lymphopenia http://purl.obolibrary.org/obo/HP_0001888
T23 11805-11825 Phenotype denotes respiratory distress http://purl.obolibrary.org/obo/HP_0002098
T24 11958-11969 Phenotype denotes lymphopenia http://purl.obolibrary.org/obo/HP_0001888
T25 12083-12097 Phenotype denotes cytokine storm http://purl.obolibrary.org/obo/HP_0033041
T26 12472-12486 Phenotype denotes cytokine storm http://purl.obolibrary.org/obo/HP_0033041
T27 13434-13445 Phenotype denotes lymphopenia http://purl.obolibrary.org/obo/HP_0001888
T28 13589-13603 Phenotype denotes cytokine storm http://purl.obolibrary.org/obo/HP_0033041
T29 14121-14135 Phenotype denotes cytokine storm http://purl.obolibrary.org/obo/HP_0033041
T30 15410-15424 Phenotype denotes cytokine storm http://purl.obolibrary.org/obo/HP_0033041
T31 15833-15847 Phenotype denotes cytokine storm http://purl.obolibrary.org/obo/HP_0033041
T32 16114-16128 Phenotype denotes cytokine storm http://purl.obolibrary.org/obo/HP_0033041
T33 16724-16738 Phenotype denotes cytokine storm http://purl.obolibrary.org/obo/HP_0033041
T34 17031-17045 Phenotype denotes cytokine storm http://purl.obolibrary.org/obo/HP_0033041
T35 17056-17070 Phenotype denotes cytokine storm http://purl.obolibrary.org/obo/HP_0033041
T36 17185-17205 Phenotype denotes respiratory distress http://purl.obolibrary.org/obo/HP_0002098
T37 17968-17987 Phenotype denotes respiratory failure http://purl.obolibrary.org/obo/HP_0002878
T38 17993-18007 Phenotype denotes cytokine storm http://purl.obolibrary.org/obo/HP_0033041
T39 18145-18165 Phenotype denotes respiratory distress http://purl.obolibrary.org/obo/HP_0002098
T40 18182-18196 Phenotype denotes Thromboembolic http://purl.obolibrary.org/obo/HP_0001907
T41 18237-18256 Phenotype denotes respiratory failure http://purl.obolibrary.org/obo/HP_0002878

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T1 1632-1644 http://purl.obolibrary.org/obo/GO_0006954 denotes inflammation
T2 1953-1975 http://purl.obolibrary.org/obo/GO_0002456 denotes cell-mediated immunity
T3 1953-1975 http://purl.obolibrary.org/obo/GO_0002449 denotes cell-mediated immunity
T4 1995-2009 http://purl.obolibrary.org/obo/GO_0019076 denotes viral shedding
T5 5510-5521 http://purl.obolibrary.org/obo/GO_0016791 denotes phosphatase
T6 12498-12517 http://purl.obolibrary.org/obo/GO_0007165 denotes signal transduction
T7 12505-12517 http://purl.obolibrary.org/obo/GO_0009293 denotes transduction
T8 12560-12579 http://purl.obolibrary.org/obo/GO_0007165 denotes signal transduction
T9 12567-12579 http://purl.obolibrary.org/obo/GO_0009293 denotes transduction
T10 12587-12606 http://purl.obolibrary.org/obo/GO_0007165 denotes signal transduction
T11 12594-12606 http://purl.obolibrary.org/obo/GO_0009293 denotes transduction
T12 12651-12670 http://purl.obolibrary.org/obo/GO_0007165 denotes signal transduction
T13 12658-12670 http://purl.obolibrary.org/obo/GO_0009293 denotes transduction
T14 12700-12705 http://purl.obolibrary.org/obo/GO_0004915 denotes IL-6R
T15 12737-12741 http://purl.obolibrary.org/obo/GO_0004915 denotes IL6R
T16 12773-12778 http://purl.obolibrary.org/obo/GO_0004921 denotes gp130
T17 12773-12778 http://purl.obolibrary.org/obo/GO_0004915 denotes gp130
T18 12773-12778 http://purl.obolibrary.org/obo/GO_0004897 denotes gp130
T19 12820-12832 http://purl.obolibrary.org/obo/GO_0009293 denotes transduction
T20 12849-12868 http://purl.obolibrary.org/obo/GO_0007165 denotes signal transduction
T21 12856-12868 http://purl.obolibrary.org/obo/GO_0009293 denotes transduction
T22 12980-12985 http://purl.obolibrary.org/obo/GO_0004921 denotes gp130
T23 12980-12985 http://purl.obolibrary.org/obo/GO_0004915 denotes gp130
T24 12980-12985 http://purl.obolibrary.org/obo/GO_0004897 denotes gp130
T25 13008-13041 http://purl.obolibrary.org/obo/GO_0035556 denotes intracellular signal transduction
T26 13022-13041 http://purl.obolibrary.org/obo/GO_0007165 denotes signal transduction
T27 13029-13041 http://purl.obolibrary.org/obo/GO_0009293 denotes transduction
T28 13173-13178 http://purl.obolibrary.org/obo/GO_0004921 denotes gp130
T29 13173-13178 http://purl.obolibrary.org/obo/GO_0004915 denotes gp130
T30 13173-13178 http://purl.obolibrary.org/obo/GO_0004897 denotes gp130
T31 13212-13216 http://purl.obolibrary.org/obo/GO_0016303 denotes PI3K
T32 13974-13979 http://purl.obolibrary.org/obo/GO_0004915 denotes IL-6R
T33 14034-14052 http://purl.obolibrary.org/obo/GO_0007165 denotes signaling pathways
T34 14034-14043 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T35 15222-15237 http://purl.obolibrary.org/obo/GO_0006955 denotes immune response
T36 16361-16380 http://purl.obolibrary.org/obo/GO_0007165 denotes signal transduction
T37 16368-16380 http://purl.obolibrary.org/obo/GO_0009293 denotes transduction
T38 16918-16940 http://purl.obolibrary.org/obo/GO_0019048 denotes virus-host interaction

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T1 0-136 Sentence denotes Early use of tocilizumab in respiratory failure associated with acute COVID -19 pneumonia in recipients with solid organ transplantation
T2 138-146 Sentence denotes Abstract
T3 147-334 Sentence denotes As of May 14, 2020, the World Health Organization has reported approximately 4.3 million cases of the novel Coronavirus Disease (COVID-19) with approximately 294,046 deaths worldwide [1].
T4 335-532 Sentence denotes Solid organ transplant recipients who are on chronic immunosuppressants fall within a special population of COVID-19 patients since they are more susceptible to complications secondary to COVID-19.
T5 533-675 Sentence denotes Currently, we do not have data on treating COVID-19 patients with solid organ transplants with tocilizumab, an interleukin-6 (IL-6) inhibitor.
T6 676-922 Sentence denotes We report a case of COVID-19 in a patient with a kidney and liver transplant and discuss the early use of tocilizumab to prevent the cytokine storm and attempt to reduce the likelihood of progression to Acute Respiratory Distress Syndrome (ARDS).
T7 923-1067 Sentence denotes In addition, we present other COVID-19 related transplant cases reported in the literature outlining the presenting clinical signs and outcomes.
T8 1069-1081 Sentence denotes Introduction
T9 1082-1266 Sentence denotes As of May 14, 2020, the World Health Organization has reported 4,248,386 cases of COVID-19 with 294,046 reported deaths secondary to complications related to the novel Coronavirus [1].
T10 1267-1396 Sentence denotes In the United States, the Center for Disease Control (CDC) reported 1,364,061 total cases and 82,246 COVID-19 related deaths [2].
T11 1397-1556 Sentence denotes A common complication reported secondary to COVID-19 is Acute Respiratory Distress Syndrome (ARDS) requiring endotracheal intubation and ventilator management.
T12 1557-1699 Sentence denotes Experts currently believe that ARDS possibly results from a state of hyper-inflammation mediated by a cytokine storm in COVID-19 patients [3].
T13 1700-1896 Sentence denotes Recipients of solid organ transplants are included in a special population of patients who may face increased risks of COVID-19 related complications given their use of chronic immunosuppressants.
T14 1897-2067 Sentence denotes Immunosuppression in this population can further reduce cell-mediated immunity, which may prolong viral shedding and increase the risk of COVID related complications [3].
T15 2068-2258 Sentence denotes As reported by McGonagle et al., interleukin-6 (IL-6) plays an important role in lung repair following viral insults and the administration of IL-6 inhibitor drugs may be time-sensitive [3].
T16 2259-2416 Sentence denotes We report a case of COVID-19 in a patient with kidney and liver transplant and discuss the use of IL-6 inhibitor to prevent a cytokine storm in this setting.
T17 2418-2429 Sentence denotes Case report
T18 2430-2621 Sentence denotes The patient is a 63-year-old male kidney and liver transplant recipient who presented to the Emergency Department (ED) after developing symptoms of mild fever, shortness of breath, and cough.
T19 2622-2753 Sentence denotes His vitals and physical exam in the Emergency Department were within normal limits, except for a temperature of 38 degrees Celsius.
T20 2754-2827 Sentence denotes His initial chest x-ray on the day of admission (Day 1) was unremarkable.
T21 2828-2943 Sentence denotes He tested negative for influenza and COVID-19 via polymerase chain reaction (PCR) and was admitted to the hospital.
T22 2944-3106 Sentence denotes At the time of admission, he had a normal white blood cell count (6.94 × 109/liter), decreased absolute lymphocyte count (2.9 %), and normal liver function tests.
T23 3107-3170 Sentence denotes Cytomegalovirus and Bordetella PCR serology were also negative.
T24 3171-3326 Sentence denotes His home immunosuppressant regimen consisted of mycophenolic acid 500 milligrams daily, prednisone 5 milligrams daily, tacrolimus 2 milligrams twice a day.
T25 3327-3481 Sentence denotes On day 2 of the admission, the patient was switched from oral prednisone to methylprednisolone 40 milligrams administered every eight hours intravenously.
T26 3482-3532 Sentence denotes On day 3, he received cefepime 1 g over six hours.
T27 3533-3610 Sentence denotes He also received five doses of hydroxychloroquine 400 milligrams on days 3–7.
T28 3611-3681 Sentence denotes On day 4, the fever subsided and vitals remained within normal limits.
T29 3682-3788 Sentence denotes However, he developed increasing shortness of breath with new diffuse expiratory wheezes on physical exam.
T30 3789-3995 Sentence denotes Repeat chest x-ray showed right lower lobe infiltrates and CT Thorax without contrast showed right upper, middle, and lower lobe infiltrates with ground glass appearance consistent with a viral pneumonitis.
T31 3996-4148 Sentence denotes This later progressed to bilateral ground glass opacities as pictured in Fig. 1, Fig. 2, Fig. 3 and warranted transfer to the Intensive Care Unit (ICU).
T32 4149-4248 Sentence denotes Test for COVID-19 serum antibodies performed at this time was positive for COVID-19 IgG antibodies.
T33 4249-4309 Sentence denotes On Day 4, he received one dose of tocilizumab 4 mL/kilogram.
T34 4310-4395 Sentence denotes Within 24 h of receiving this medication, his shortness of breath started to improve.
T35 4396-4546 Sentence denotes His oxygen requirement dropped to 2–3 liters via nasal cannula with exercise while maintaining an oxygen saturation of 86–94 % over the next two days.
T36 4547-4608 Sentence denotes His chest x-ray also showed improvement, as shown in Fig. 4 .
T37 4609-4665 Sentence denotes Overall, he began to show clinical signs of improvement.
T38 4666-4726 Sentence denotes Mycophenolic acid and tacrolimus were discontinued on day 5.
T39 4727-4823 Sentence denotes Table 1 shows the lab results for the patient through the first seven days of his hospital stay.
T40 4824-4892 Sentence denotes Fig. 1 CT Thorax without contrast: bilateral ground glass opacities.
T41 4893-4961 Sentence denotes Fig. 2 CT Thorax without contrast: bilateral ground glass opacities.
T42 4962-5030 Sentence denotes Fig. 3 CT Thorax without contrast: bilateral ground glass opacities.
T43 5031-5087 Sentence denotes Fig. 4 Chest x-ray improved after six days of treatment.
T44 5088-5123 Sentence denotes Table 1 Patient labs from Day 1–10.
T45 5124-5251 Sentence denotes Labratory Test Results 4/11/20Day 1 4/13/20day 3 4/14/20day 4 4/15/20day 5 4/16/20day 6 4/17/20day 7 4/18/20day 8 4/20/20day 10
T46 5252-5302 Sentence denotes WBC(4.5–11 × 109/L) 6.94 6.73 12.13 8.27 8.03 8.89
T47 5303-5351 Sentence denotes Lymphocytes(30–45 %) 2.90 % 3.70 % 3.30 % 6.50 %
T48 5352-5368 Sentence denotes Creatinine(Male:
T49 5369-5420 Sentence denotes 0.70−1.30 mg/dL) 1.20 1.30 1.50 1.10 1.00 0.90 0.90
T50 5421-5460 Sentence denotes AST(10−40 units/L) 21 25 29 34 37 25 22
T51 5461-5500 Sentence denotes ALT(10−40 units/L) 29 26 28 45 64 53 51
T52 5501-5558 Sentence denotes Alkaline phosphatase(30−120 units/L) 81 75 72 68 63 63 72
T53 5559-5592 Sentence denotes LDH(80–225 units/L) 226.00 344.00
T54 5593-5639 Sentence denotes C-reactive protein (<0.8 mg/dL) 3.70 1.20 0.60
T55 5640-5679 Sentence denotes IL-6(5−15 pg/mL) 18.2 670.8 392.8 280.7
T56 5680-5739 Sentence denotes Prograf/ Tacrolimus levels(5.0−15.0 ng/mL) 17.30 14.80 7.90
T57 5740-5754 Sentence denotes Ferritin(male:
T58 5755-5783 Sentence denotes 54–755 pmol/L) 336.50 225.90
T59 5784-5818 Sentence denotes VBG pH 7.47pO2 81pCO2 32HCO3 23.20
T60 5819-5852 Sentence denotes ABG pH 7.42pO2 72pCO2 33HCO3 21.4
T61 5853-5861 Sentence denotes Serology
T62 5862-5880 Sentence denotes Influenza Negative
T63 5881-5910 Sentence denotes Coronavirus Negative Positive
T64 5911-5995 Sentence denotes However, on Day 7, he decompensated requiring intubation and mechanical ventilation.
T65 5996-6052 Sentence denotes The critical care team also placed him on a rotator bed.
T66 6053-6150 Sentence denotes On day 8, his oxygen requirements substantially increased requiring an increase of oxygen to 1 L.
T67 6151-6206 Sentence denotes At this time, he received a second dose of tocilizumab.
T68 6207-6264 Sentence denotes The patient remained critically ill following intubation.
T69 6265-6359 Sentence denotes Seven days after intubation he developed a right sided pneumothorax and required a chest tube.
T70 6360-6444 Sentence denotes The liver function tests, blood urea nitrogen (BUN), and creatinine remained stable.
T71 6445-6515 Sentence denotes During his ICU stay, he was fully therapeutically heparinized as well.
T72 6516-6574 Sentence denotes He developed no evidence of secondary bacterial infection.
T73 6575-6642 Sentence denotes We obtained consent and administered 200 mL of convalescent plasma.
T74 6643-6733 Sentence denotes He remained stable without significant change in his condition over the next several days.
T75 6734-6811 Sentence denotes On Day 14, the pneumothorax resolved and he began weaning off the ventilator.
T76 6813-6823 Sentence denotes Discussion
T77 6824-6969 Sentence denotes Severe Acute Respiratory Disease 2 (SARS-CoV-2) is a highly infectious, novel coronavirus that emerged in Wuhan, China in December of 2019 [4,5].
T78 6970-7154 Sentence denotes As of May 14, 2020, the World Health Organization has reported 4,248,386 cases of COVID-19 with 294,046 reported deaths secondary to complications related to the novel Coronavirus [1].
T79 7155-7296 Sentence denotes While this lethal disease has not spared immunocompetent patients, populations who have the highest mortality risk require special attention.
T80 7297-7387 Sentence denotes At this time, there are limited case reports on solid organ transplant (SOT) patients [6].
T81 7388-7511 Sentence denotes There is insufficient data on the clinical presentation and management of immunosuppressant regimens in SOT recipients [4].
T82 7512-7649 Sentence denotes These patients may differ from the immunocompetent population in regards to presentation, diagnosis, and clinical course of Covid-19 [4].
T83 7650-7740 Sentence denotes Notably, transplant patients may present with mild or atypical symptoms and without fever.
T84 7741-7834 Sentence denotes Thus, physicians must maintain broad differential diagnoses and high clinical suspicions [7].
T85 7835-7977 Sentence denotes One case series of five patients reported the most common symptoms on admission were fever, cough, myalgia/fatigue, and sputum production [5].
T86 7978-8063 Sentence denotes Other case reports have identified patients as having vague abdominal discomfort [4].
T87 8064-8130 Sentence denotes Table 2 outlines the reported cases on COVID-19 in SOT recipients.
T88 8131-8234 Sentence denotes We did not find any reports of patients with double solid organ transplants reported in the literature.
T89 8235-8293 Sentence denotes Table 2 Reported cases of COVID 19 in transplant patients.
T90 8294-8322 Sentence denotes MMF = Mycophenolate Mofetil.
T91 8323-8352 Sentence denotes WBC = White blood cell count.
T92 8353-8378 Sentence denotes CRP = C-reactive protein.
T93 8379-8407 Sentence denotes LDH = lactate dehydrogenase.
T94 8408-8671 Sentence denotes Age/ Sex Solid Organ Transplant ChronicImmunomodulator Medications given during admission while receivingCOVID treatment IL-6 levels WBC(4.5–11 × 109/L) Lymphocytes (30–45 %) CRP(<0.8 mg/dL; <76.2 nmol/L) LDH(80–225 units/L) Outcome Total Days of Illness Citation
T95 8672-8941 Sentence denotes 37M Liver Tacrolimus Oseltamivir, phosphate capsules, cefoperazonesulbactam sodium, methylprednisoloneTacrolimus discontinued Not Reported 2.46 48% Not reported Not Reported Acute transplant rejection, but recovered after tacrolimus was resumedFull recovery 15 days [4]
T96 8942-9202 Sentence denotes 48M Kidney, 2003 Tacrolimus MMF Oseltamivir, abidol moxifloxacin, recombinant human interferon alpha, methylprednisolone, human IVIG TacrolimusMMF discontinued Not Reported 2.49 64% 31.25 Not Reported Bone marrow suppression due to MMFFull recovery 42 days [4]
T97 9203-9370 Sentence denotes 38M Kidney, 2019 Glucocorticoid MMF Tacrolimus Oseltamivir, arbidol Glucocorticoids TacrolimusMMF discontinued Not Reported 4.73 63% 0.37 193 Full recovery 26 days [5]
T98 9371-9571 Sentence denotes 64M Kidney, 2016 Glucocorticoid MMF rapamycin Oseltamivir or arbidol cefepime and IVIG Glucocorticoids TacrolimusMMF discontinued Not Reported 17.67 55% 1.26 180 Remained hospitalized Not Reported [5]
T99 9572-9807 Sentence denotes 37F Kidney, 2019 Glucocorticoid MMF Tacrolimus Oseltamivir or arbidol cefepimeIVIG GlucocorticoidsMMF discontinuedTacrolimus discontinued, then restarted at half the dose Not Reported 5.67 31% 2.03 160 Remained hospitalized 22 days [5]
T100 9808-10011 Sentence denotes 47M Kidney, 2019 Glucocorticoid MMF Tacrolimus Oseltamivir or arbidol GlucocorticoidsMMF discontinuedTacrolimus stopped and restarted Not Reported 3.99 51% 0.45 235 Remained hospitalized Not Reported [5]
T101 10012-10169 Sentence denotes 38M Kidney, 2017 Glucocorticoid MMF Tacrolimus Oseltamivir or arbidol Glucocorticoids MMF Tacrolimus Not Reported 6.44 91% 0.39 248 Full recovery 23 days [5]
T102 10170-10211 Sentence denotes 50 M Liver Tacrolimus Methylprednisolone.
T103 10212-10398 Sentence denotes Umifenovir, Lopinavir/ritonavir,IVIG,Cefoperazone, alpha interferonTacrolimus discontinued for 4 weeks due to lymphopenia Not Reported 5.9 72% 32.1 Not Reported Full recovery 28 days [6]
T104 10399-10620 Sentence denotes 49M Kidney Cyclosporine MMF Prednisone Lopinavir, ritonavir, ribavirin, interferon alpha-2b, methylprednisolone, MMF, prednisoneCyclosporine discontinued Not Reported 7.18 59% 22.73 Not Reported Full recovery 14 days [19]
T105 10621-10753 Sentence denotes 50M Kidney, 1992, 2016 MMF Tacrolimus MMF, Tacrolimus,ceftriaxone 26.22 3.2 60% Not Reported Not Reported Full recovery 13 days [17]
T106 10754-10917 Sentence denotes 58M Kidney, 2017 Belatacept MMF Prednisone BelataceptCyclosporinePrednisoneMMF discontinued during treatment 29 5.04 16% 14 Not Reported Full recovery 18 days [20]
T107 10918-11156 Sentence denotes 36F Kidney, 1993, 1995 Tacrolimus Prednisone Hydroxychloroquine, opinavir/ritonavir, ceftriaxone, tacrolimus, methlyprednisolone Within normal limits(reported elevated IL-8) High neutrophil normal 67 Not Reported Full recovery 9 days [21]
T108 11157-11379 Sentence denotes 58M Kidney MMF Prednisone MethylprednisoloneMMF discontinued during treatment Not Reported Not Reported Not Reported Not Reported Not Reported Mechanical ventilation; death due to multi-organ failure on Day 40 40 days [22]
T109 11380-11552 Sentence denotes 52 M Kidney Tacrolimus MMF Prednisone Imifovir, Moxifloxacin Methylprednisolone, Biapenem, interferon alphaAll immunosuppressive agents discontinued during treatment Day 2:
T110 11553-11565 Sentence denotes 19.53 Day 2:
T111 11566-11591 Sentence denotes 5.54; Day 11 11.68 Day 2:
T112 11592-11606 Sentence denotes 17.9 % Day 11:
T113 11607-11618 Sentence denotes 12 % Day 2:
T114 11619-11630 Sentence denotes 54; Day 11:
T115 11631-11674 Sentence denotes 1.4 Not Reported Full recovery 18 days [23]
T116 11675-11846 Sentence denotes Recent proposals regarding the pathophysiology of COVID-19 suggest a hyper-inflammatory state resulting in COVID-19 related acute respiratory distress syndrome (ARDS) [3].
T117 11847-11974 Sentence denotes Once infected, there is loss of primary antiviral defense because of virus-induced interferon suppression with lymphopenia [8].
T118 11975-12127 Sentence denotes Subsequently, the body activates a second defense mechanism, known as the “second wave,” which results in a cytokine storm and severe tissue damage [3].
T119 12128-12364 Sentence denotes Increases in many inflammatory markers, such as erythrocyte sedimentation rate (ESR), C-reactive protein (CRP), serum ferritin, interleukins 6, 8, and 10, procalcitonin, and interleukin-receptor have been found in COVID-19 patients [9].
T120 12365-12492 Sentence denotes Interleukin-6 (IL-6) is a marker of recent interest because of its role in the “second wave” and resulting cytokine storm. [10]
T121 12493-12636 Sentence denotes IL-6 signal transduction occurs via three main pathways: classical signal transduction, trans signal transduction, and trans presentation [11].
T122 12637-12838 Sentence denotes The classical signal transduction involves IL-6 binding to the IL-6R and forming a complex; the IL6-IL6R complex then binds to membrane gp130 and subsequently initiates intracellular transduction [11].
T123 12839-13047 Sentence denotes The trans signal transduction pathway occurs with IL-6 binding to sIL-6R and forming a complex; the IL6-sIL6R complex then binds to membrane gp130, which then initiates intracellular signal transduction [11].
T124 13048-13250 Sentence denotes The trans presentation signal involves sgp130 forming a complex with sIL-6R to prevent sIL-6R from binding to membrane-bound gp130; the JAK-STATA, RAS-RAF, and ATK-PI3K pathways are then activated [11].
T125 13251-13376 Sentence denotes Chen et al. found in a sample of 48 patients that increased levels of IL-6 significantly correlated to disease severity [12].
T126 13377-13630 Sentence denotes Another study reported a significant association between lymphopenia and increased IL-6 levels in COVID-19 non-survivors compared with survivors. [12,13] These findings suggest monitoring IL-6 levels to evaluate cytokine storm as a prognostic tool [12].
T127 13631-13838 Sentence denotes However, it is likely that physicians do not routinely follow IL-6 levels in COVID-19 patients with solid organ transplants, as it was not a commonly reported lab value in the studies we evaluated (Table 2).
T128 13839-13955 Sentence denotes Treatment with tocilizumab, a monoclonal antibody that binds to the IL-6 Receptor, has been recently published [11].
T129 13956-14141 Sentence denotes By binding to the IL-6R, tocilizumab can inhibit both the classical and trans signaling pathways leading to a reduction in the “second wave” response and preventing cytokine storm [11].
T130 14142-14370 Sentence denotes The standard treatment dosing according to the Diagnosis and Treatment Protocol for COVID-19 (7th Edition) is a first dose of 4−8 mg/kg/day, with 400 mg diluted to 100 mL with 0.9 % normal saline, infused over a 1 h period [14].
T131 14371-14453 Sentence denotes The maximal dose is 800 mg, and the maximal number of administrations is two [14].
T132 14454-14736 Sentence denotes This dosing is based on a small trial of 21 patients that received tocilizumab, in addition to the standard care recommended by the Diagnosis and Treatment Protocol for Covid-19 (6th Edition) including lopinavir, methylprednisolone, other symptom relievers, and oxygen therapy [15].
T133 14737-14810 Sentence denotes Given the small sample size, we need more research on appropriate dosing.
T134 14811-14908 Sentence denotes At this time, there is a multicenter randomized controlled trial currently ongoing in China [16].
T135 14909-14987 Sentence denotes Another potential medication that decreases IL-6 levels is metronidazole [13].
T136 14988-15080 Sentence denotes In vitro and in vivo studies have shown that metronidazole decreases serum IL-6 levels [13].
T137 15081-15181 Sentence denotes Close monitoring of immunosuppressive therapy in SOT recipients infected with COVID-19 is necessary.
T138 15182-15297 Sentence denotes There is a balance of allowing adequate immune response to suppress viral load and preventing transplant rejection.
T139 15298-15430 Sentence denotes Previous case reports have hypothesized that immunosuppressive therapy protects SOT recipients by dampening the cytokine storm [17].
T140 15431-15556 Sentence denotes Other case reports have noted that viral RNA levels remain positive for a longer period than in immunocompetent patients [4].
T141 15557-15686 Sentence denotes This is notable because previous studies have demonstrated that ARDS occurs in SARS patients despite a decreased viral load [18].
T142 15687-15853 Sentence denotes This is important because it indicates antiviral therapy alone is inadequate treatment and supports the hypothesis that the ARDS results from the cytokine storm [18].
T143 15854-16053 Sentence denotes One case report of a liver transplant recipient that tested positive for COVID-19 suffered from acute transplant rejection despite maintaining adequate immunosuppression based on lymphocyte subtests.
T144 16054-16189 Sentence denotes 4 This suggests that early IL-6 intervention to prevent the cytokine storm could improve outcomes in COVID-19 positive, SOT recipients.
T145 16190-16326 Sentence denotes One of the main concerns with IL-6 blockade in the treatment of COVID-19, however, is the appropriate timing of when to start treatment.
T146 16327-16428 Sentence denotes It is possible that blocking IL-6 signal transduction can lead to a reduction in viral clearance [3].
T147 16429-16562 Sentence denotes In patients that are already immunosuppressed, this could lead to a much higher viral load as compared with immunocompetent patients.
T148 16563-16649 Sentence denotes Additionally, we do not know whether IL-6 alters the levels of circulating tacrolimus.
T149 16650-16751 Sentence denotes This may suggest cessation of immunosuppressive therapy until the initial cytokine storm as resolved.
T150 16752-16941 Sentence denotes Temporary removal of immunosuppressive regiment is likely beneficial for transplant recipients because clinical outcomes of COVID-19 seems to mostly dependent on the virus-host interaction.
T151 16942-17046 Sentence denotes Another interesting finding in many patients with COVID-19 is the potential for a second cytokine storm.
T152 17047-17235 Sentence denotes A second cytokine storm may have happened to the patient in this case report as he clinically improved and then developed a recurrence of respiratory distress that required the intubation.
T153 17236-17333 Sentence denotes The IL-6 levels were also markedly elevated at this time suggesting an ongoing cytokine response.
T154 17334-17445 Sentence denotes This may be the reason why several of these patients become severely hypoxic after a few days of stabilization.
T155 17446-17581 Sentence denotes This may also suggest that we administer the tocilizumab in an interval fashion, approximately 4–6 days after the first administration.
T156 17582-17754 Sentence denotes In conclusion, there is limited data on the clinical presentation, management, and appropriate treatment of COVID-19 patients who are recipients of solid organ transplants.
T157 17755-17988 Sentence denotes The use of IL-6 inhibitor in our patient resulted in clinical improvement initially, but it is difficult to determine if the tocilizumab played a role in the management of this patient, specifically in preventing respiratory failure.
T158 17989-18181 Sentence denotes The cytokine storm appears to play a major role in these patients, and it is possible that several of them experience a second storm that results in severe respiratory distress and intubation.
T159 18182-18257 Sentence denotes Thromboembolic phenomena also appear to play a role in respiratory failure.
T160 18258-18400 Sentence denotes A single case does not represent the complex strategy needed when considering the treatment of COVID-19 patients with solid organ transplants.
T161 18401-18503 Sentence denotes Further studies are necessary to investigate treatment modalities for COVID-19 in special populations.

2_test

Id Subject Object Predicate Lexical cue
32685369-32108352-46476501 14904-14906 32108352 denotes 16
T96720 14904-14906 32108352 denotes 16