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PMC:7317273 / 1142-2221 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T5 606-611 Body_part denotes blood http://purl.org/sig/ont/fma/fma9670

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 606-611 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T6 28-52 Disease denotes coronavirus disease 2019 http://purl.obolibrary.org/obo/MONDO_0100096
T7 54-61 Disease denotes COVID19 http://purl.obolibrary.org/obo/MONDO_0100096
T8 139-146 Disease denotes COVID19 http://purl.obolibrary.org/obo/MONDO_0100096
T9 147-156 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T10 459-466 Disease denotes COVID19 http://purl.obolibrary.org/obo/MONDO_0100096
T11 467-476 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T12 564-586 Disease denotes cardiovascular disease http://purl.obolibrary.org/obo/MONDO_0004995
T13 588-596 Disease denotes diabetes http://purl.obolibrary.org/obo/MONDO_0005015
T14 601-620 Disease denotes high blood pressure http://purl.obolibrary.org/obo/MONDO_0005044
T15 764-771 Disease denotes COVID19 http://purl.obolibrary.org/obo/MONDO_0100096
T16 998-1007 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T10 72-75 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T11 236-241 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T12 242-245 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T13 606-611 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood
T14 606-611 http://www.ebi.ac.uk/efo/EFO_0000296 denotes blood
T15 937-944 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
30 407-418 Species denotes coronavirus Tax:11118
31 422-428 Species denotes People Tax:9606
32 906-927 Species denotes coronavirus/2019-ncov Tax:2697049
33 28-52 Disease denotes coronavirus disease 2019 MESH:C000657245
34 54-61 Disease denotes COVID19 MESH:C000657245
35 139-156 Disease denotes COVID19 infection MESH:C000657245
36 350-356 Disease denotes deaths MESH:D003643
37 459-476 Disease denotes COVID19 infection MESH:C000657245
38 564-586 Disease denotes cardiovascular disease MESH:D002318
39 588-596 Disease denotes diabetes MESH:D003920
40 764-771 Disease denotes COVID19 MESH:C000657245
41 780-785 Disease denotes fever MESH:D005334
42 787-792 Disease denotes cough MESH:D003371
43 798-817 Disease denotes shortness of breath MESH:D004417
44 819-826 Disease denotes fatigue MESH:D005221
45 831-842 Disease denotes sudden loss MESH:D001766
46 998-1007 Disease denotes pneumonia MESH:D011014
47 1047-1052 Disease denotes death MESH:D003643

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T1 846-860 http://purl.obolibrary.org/obo/GO_0007608 denotes sense of smell
T2 865-870 http://purl.obolibrary.org/obo/GO_0050909 denotes taste

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T11 0-120 Sentence denotes Over the past 5 months, the coronavirus disease 2019 (COVID19) pandemic has relentlessly impacted the global population.
T12 121-219 Sentence denotes The first case of COVID19 infection was identified in the Wuhan City of China on December 1, 2019.
T13 220-421 Sentence denotes Since then, the virus has spread to 213 countries and territories, resulting in over 5.3 million confirmed cases and over 340,000 deaths as on May 23, 2020 (https://www.worldometers.info/coronavirus/).
T14 422-686 Sentence denotes People of all ages are vulnerable to COVID19 infection; however, those over 60 years of age and with pre-existing medical conditions, such as cardiovascular disease, diabetes, or high blood pressure, are more prone to fall seriously ill and succumb to the disease.
T15 687-1079 Sentence denotes According to the Centers for Disease Control and Prevention, the symptoms of COVID19 include fever, cough, and shortness of breath, fatigue and sudden loss of sense of smell and taste in some cases (https://www.cdc.gov/coronavirus/2019-ncov/symptoms-testing/symptoms.html), though its typical characteristic is pneumonia that requires hospitalization and even death, if not intervened timely.

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T1 564-586 Phenotype denotes cardiovascular disease http://purl.obolibrary.org/obo/HP_0001626
T2 601-620 Phenotype denotes high blood pressure http://purl.obolibrary.org/obo/HP_0000822
T3 780-785 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T4 787-792 Phenotype denotes cough http://purl.obolibrary.org/obo/HP_0012735
T5 798-817 Phenotype denotes shortness of breath http://purl.obolibrary.org/obo/HP_0002098
T6 819-826 Phenotype denotes fatigue http://purl.obolibrary.org/obo/HP_0012378
T7 998-1007 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T15 28-39 NCBITaxon:11118 denotes coronavirus
T16 54-61 SP_7 denotes COVID19
T17 139-146 SP_7 denotes COVID19
T18 236-241 NCBITaxon:10239 denotes virus
T19 350-356 GO:0016265 denotes deaths
T20 407-418 NCBITaxon:11118 denotes coronavirus
T21 422-428 NCBITaxon:1 denotes People
T22 459-466 SP_7 denotes COVID19
T23 564-578 UBERON:0004535 denotes cardiovascular
T24 606-611 UBERON:0000178 denotes blood
T25 764-771 SP_7 denotes COVID19
T26 855-860 GO:0007608 denotes smell
T27 865-870 GO:0050909 denotes taste
T28 906-917 NCBITaxon:11118 denotes coronavirus
T29 918-927 SP_7 denotes 2019-ncov
T30 1047-1052 GO:0016265 denotes death
T37898 28-39 NCBITaxon:11118 denotes coronavirus
T5984 54-61 SP_7 denotes COVID19
T88632 139-146 SP_7 denotes COVID19
T17715 236-241 NCBITaxon:10239 denotes virus
T28290 350-356 GO:0016265 denotes deaths
T56471 407-418 NCBITaxon:11118 denotes coronavirus
T55752 422-428 NCBITaxon:1 denotes People
T58742 459-466 SP_7 denotes COVID19
T69863 564-578 UBERON:0004535 denotes cardiovascular
T9157 606-611 UBERON:0000178 denotes blood
T4371 764-771 SP_7 denotes COVID19
T68033 855-860 GO:0007608 denotes smell
T5921 865-870 GO:0050909 denotes taste
T2147 906-917 NCBITaxon:11118 denotes coronavirus
T87455 918-927 SP_7 denotes 2019-ncov
T76836 1047-1052 GO:0016265 denotes death