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PMC:7314083 / 175-1118 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T2 275-284 Body_part denotes left lung http://purl.org/sig/ont/fma/fma7310
T3 654-666 Body_part denotes aortic valve http://purl.org/sig/ont/fma/fma7236
T4 726-738 Body_part denotes aortic valve http://purl.org/sig/ont/fma/fma7236

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T5 275-284 Body_part denotes left lung http://purl.obolibrary.org/obo/UBERON_0002168
T6 280-284 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T7 654-666 Body_part denotes aortic valve http://purl.obolibrary.org/obo/UBERON_0002137
T8 661-666 Body_part denotes valve http://purl.obolibrary.org/obo/UBERON_0003978
T9 726-738 Body_part denotes aortic valve http://purl.obolibrary.org/obo/UBERON_0002137
T10 733-738 Body_part denotes valve http://purl.obolibrary.org/obo/UBERON_0003978

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T4 138-158 Disease denotes aortic insufficiency http://purl.obolibrary.org/obo/MONDO_0005648
T5 310-318 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T6 319-328 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T7 462-471 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T8 22-23 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T9 32-33 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T10 46-50 http://purl.obolibrary.org/obo/UBERON_0003101 denotes male
T11 46-50 http://www.ebi.ac.uk/efo/EFO_0000970 denotes male
T12 138-144 http://www.ebi.ac.uk/efo/EFO_0000265 denotes aortic
T13 196-197 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T14 275-284 http://purl.obolibrary.org/obo/UBERON_0002168 denotes left lung
T15 308-309 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T16 417-424 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing
T17 446-447 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T18 492-496 http://purl.obolibrary.org/obo/UBERON_0000473 denotes test
T19 553-560 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing
T20 654-660 http://www.ebi.ac.uk/efo/EFO_0000265 denotes aortic
T21 661-666 http://www.ebi.ac.uk/efo/EFO_0000825 denotes valve
T22 726-732 http://www.ebi.ac.uk/efo/EFO_0000265 denotes aortic
T23 733-738 http://www.ebi.ac.uk/efo/EFO_0000825 denotes valve
T24 901-902 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T1 46-50 Chemical denotes male http://purl.obolibrary.org/obo/CHEBI_30780

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
16 51-58 Species denotes patient Tax:9606
17 178-185 Species denotes patient Tax:9606
18 575-582 Species denotes patient Tax:9606
19 138-158 Disease denotes aortic insufficiency MESH:D001022
20 310-318 Disease denotes COVID-19 MESH:C000657245
21 319-328 Disease denotes infection MESH:D007239
22 462-471 Disease denotes infection MESH:D007239
23 919-942 Disease denotes pulmonary complications MESH:D008171

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T1 360-381 http://purl.obolibrary.org/obo/GO_0001171 denotes reverse transcription
T2 368-381 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T3 0-8 Sentence denotes Abstract
T4 9-159 Sentence denotes We report on a case of a 57-year-old male patient, who underwent full root replacement in 2005 and now presented with high grade aortic insufficiency.
T5 160-425 Sentence denotes On admission, the patient underwent a computed tomography scan which demonstrated interstitial infiltration in the left lung, highly suspicious for a COVID-19 infection that could not be confirmed by reverse transcription polymerase chain reaction (RT-PCR) testing.
T6 426-561 Sentence denotes As there usually is a delay between infection and positive RT-PCR test results, the initial decision was to perform additional testing.
T7 562-689 Sentence denotes However, the patient deteriorated quickly in spite of optimal medical therapy making urgent aortic valve replacement necessary.
T8 690-943 Sentence denotes We decided to perform transcatheter aortic valve replacement to avoid cardiopulmonary bypass with shorter operative times, presumably shorter ventilation times and duration of intensive care unit stay, and thus a lesser risk for pulmonary complications.

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T1 138-158 Phenotype denotes aortic insufficiency http://purl.obolibrary.org/obo/HP_0001659