PMC:7314075 / 6900-9314
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T18 | 199-203 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T19 | 1289-1293 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T58 | 24-30 | Disease | denotes | cancer | http://purl.obolibrary.org/obo/MONDO_0004992 |
| T59 | 190-213 | Disease | denotes | squamous cell carcinoma | http://purl.obolibrary.org/obo/MONDO_0005096 |
| T60 | 204-213 | Disease | denotes | carcinoma | http://purl.obolibrary.org/obo/MONDO_0004993 |
| T61 | 246-252 | Disease | denotes | cancer | http://purl.obolibrary.org/obo/MONDO_0004992 |
| T62 | 442-448 | Disease | denotes | cancer | http://purl.obolibrary.org/obo/MONDO_0004992 |
| T63 | 658-664 | Disease | denotes | cancer | http://purl.obolibrary.org/obo/MONDO_0004992 |
| T64 | 956-962 | Disease | denotes | cancer | http://purl.obolibrary.org/obo/MONDO_0004992 |
| T65 | 1064-1073 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T66 | 1085-1093 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T67 | 1280-1303 | Disease | denotes | squamous cell carcinoma | http://purl.obolibrary.org/obo/MONDO_0005096 |
| T68 | 1294-1303 | Disease | denotes | carcinoma | http://purl.obolibrary.org/obo/MONDO_0004993 |
| T69 | 1631-1639 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T55 | 199-203 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T56 | 746-747 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T57 | 964-966 | http://purl.obolibrary.org/obo/CLO_0050507 | denotes | 22 |
| T58 | 1289-1293 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T59 | 1586-1587 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T60 | 1989-1990 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T61 | 2354-2355 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T5 | 872-880 | Chemical | denotes | adjuvant | http://purl.obolibrary.org/obo/CHEBI_60809 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 154 | 399-407 | Species | denotes | patients | Tax:9606 |
| 155 | 1018-1026 | Species | denotes | patients | Tax:9606 |
| 156 | 1044-1052 | Species | denotes | patients | Tax:9606 |
| 157 | 24-30 | Disease | denotes | cancer | MESH:D009369 |
| 158 | 190-213 | Disease | denotes | squamous cell carcinoma | MESH:D002294 |
| 159 | 246-252 | Disease | denotes | cancer | MESH:D009369 |
| 160 | 276-283 | Disease | denotes | cancers | MESH:D009369 |
| 161 | 442-448 | Disease | denotes | cancer | MESH:D009369 |
| 162 | 646-664 | Disease | denotes | oesophageal cancer | MESH:D009369 |
| 163 | 956-962 | Disease | denotes | cancer | MESH:D009369 |
| 164 | 1064-1073 | Disease | denotes | infection | MESH:D007239 |
| 165 | 1085-1093 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 166 | 1268-1303 | Disease | denotes | oesophageal squamous cell carcinoma | MESH:D002294 |
| 167 | 1631-1639 | Disease | denotes | COVID-19 | MESH:C000657245 |
TEST0
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32496537-220-226-6072 | 554-556 | ["26254683"] | denotes | 20 |
| 32496537-224-230-6073 | 558-560 | ["30089078"] | denotes | 21 |
| 32496537-224-230-6074 | 1529-1531 | ["17401004"] | denotes | 23 |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T23 | 24-30 | Phenotype | denotes | cancer | http://purl.obolibrary.org/obo/HP_0002664 |
| T24 | 190-213 | Phenotype | denotes | squamous cell carcinoma | http://purl.obolibrary.org/obo/HP_0002860 |
| T25 | 246-252 | Phenotype | denotes | cancer | http://purl.obolibrary.org/obo/HP_0002664 |
| T26 | 442-448 | Phenotype | denotes | cancer | http://purl.obolibrary.org/obo/HP_0002664 |
| T27 | 658-664 | Phenotype | denotes | cancer | http://purl.obolibrary.org/obo/HP_0002664 |
| T28 | 956-962 | Phenotype | denotes | cancer | http://purl.obolibrary.org/obo/HP_0002664 |
| T29 | 1280-1303 | Phenotype | denotes | squamous cell carcinoma | http://purl.obolibrary.org/obo/HP_0002860 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T46 | 0-179 | Sentence | denotes | Conversely, oesophageal cancer is an important disease in the clinical practice of thoracic surgery, and oesophagectomy is the earliest and most important treatment method so far. |
| T47 | 180-333 | Sentence | denotes | In China, squamous cell carcinoma accounts for 90% of oesophageal cancer [19], and 90% of these cancers show locally advanced disease at the first visit. |
| T48 | 334-562 | Sentence | denotes | There is strong clinical evidence that the long-term survival of patients with locally advanced oesophageal cancer is significantly better with induction chemoradiation followed by surgery compared with upfront surgery [20, 21]. |
| T49 | 563-851 | Sentence | denotes | However, in clinical practice in China, preoperative treatment of locally advanced oesophageal cancer is not universal because of different understanding of multimodality treatments, a lack of multi-disciplinary cooperation and unbalanced deployment of radiation technology and equipment. |
| T50 | 852-1103 | Sentence | denotes | Thus, postoperative adjuvant treatment accounts for ˃50% of the comprehensive treatment for oesophageal cancer [22], which not only affects the long-term survival of patients, but also places patients at risk of infection during the COVID-19 pandemic. |
| T51 | 1104-1304 | Sentence | denotes | Preoperative induction chemoradiotherapy improves the curative effect of surgery, and some scholars even question the role of surgery in comprehensive treatment of oesophageal squamous cell carcinoma. |
| T52 | 1305-1533 | Sentence | denotes | These specialists concluded that overall survival after concurrent chemoradiation was not statistically different from survival after trimodality therapy, therefore, concurrent chemoradiation could replace surgery entirely [23]. |
| T53 | 1534-1721 | Sentence | denotes | Although this viewpoint is controversial because of a lack of strong evidence, under the current COVID-19 pandemic situation, we should more strictly consider the indications for surgery. |
| T54 | 1722-1922 | Sentence | denotes | We should choose more conservative treatments for seniors, those with severe comorbidities, and those with advanced disease, to decrease the risks associated with surgery under this special situation. |
| T55 | 1923-2042 | Sentence | denotes | Conversely, we have noticed that preoperative radiation dosage is a controversial issue in preoperative chemoradiation. |
| T56 | 2043-2184 | Sentence | denotes | In fact, the ‘curative’ radiation dosage in Asian countries is similar to the ‘preoperative induction’ radiation dosage in western countries. |
| T57 | 2185-2414 | Sentence | denotes | In this special period, we might as well give ‘curative’ concurrent chemoradiotherapy (radiation dose similar to the Western preoperative dose), and consider surgery in a ‘salvage’ situation after close observation and follow-up. |
MyTest
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32496537-26254683-28904385 | 554-556 | 26254683 | denotes | 20 |
| 32496537-30089078-28904386 | 558-560 | 30089078 | denotes | 21 |
| 32496537-17401004-28904387 | 1529-1531 | 17401004 | denotes | 23 |
0_colil
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32496537-26254683-6072 | 554-556 | 26254683 | denotes | 20 |
| 32496537-30089078-6073 | 558-560 | 30089078 | denotes | 21 |
| 32496537-17401004-6074 | 1529-1531 | 17401004 | denotes | 23 |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32496537-26254683-28904385 | 554-556 | 26254683 | denotes | 20 |
| 32496537-30089078-28904386 | 558-560 | 30089078 | denotes | 21 |
| 32496537-17401004-28904387 | 1529-1531 | 17401004 | denotes | 23 |
testtesttest
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T20 | 199-203 | Body_part | denotes | cell | http://purl.obolibrary.org/obo/CL_0000000 |
| T21 | 1289-1293 | Body_part | denotes | cell | http://purl.obolibrary.org/obo/CL_0000000 |