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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T1 3621-3626 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T2 3815-3819 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T3 3989-3993 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T4 4090-4094 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T5 4200-4204 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T6 4287-4291 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T7 4330-4334 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T8 4461-4465 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T9 4849-4853 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T10 5046-5050 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T11 5209-5213 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T12 5344-5348 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T13 5445-5449 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T14 5642-5646 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T15 5687-5692 Body_part denotes lipid http://purl.org/sig/ont/fma/fma67264
T16 6050-6054 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T17 6055-6059 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T18 7099-7103 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T19 8189-8193 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T20 10741-10764 Body_part denotes lower respiratory tract http://purl.org/sig/ont/fma/fma45662
T21 11207-11224 Body_part denotes respiratory tract http://purl.org/sig/ont/fma/fma265130
T22 11256-11273 Body_part denotes respiratory tract http://purl.org/sig/ont/fma/fma265130
T23 11338-11344 Body_part denotes sputum http://purl.org/sig/ont/fma/fma312401
T24 11980-11985 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T25 12025-12030 Body_part denotes blood http://purl.org/sig/ont/fma/fma9670
T26 12049-12056 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T27 12473-12490 Body_part denotes respiratory tract http://purl.org/sig/ont/fma/fma265130
T28 12527-12532 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 3621-3626 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T2 3815-3819 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T3 3989-3993 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T4 4090-4094 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T5 4200-4204 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T6 4287-4291 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T7 4330-4334 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T8 4461-4465 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T9 4849-4853 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T10 5046-5050 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T11 5209-5213 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T12 5344-5348 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T13 5445-5449 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T14 5642-5646 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T15 6055-6059 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T16 10741-10764 Body_part denotes lower respiratory tract http://purl.obolibrary.org/obo/UBERON_0001558
T17 10747-10764 Body_part denotes respiratory tract http://purl.obolibrary.org/obo/UBERON_0000065
T18 11207-11224 Body_part denotes respiratory tract http://purl.obolibrary.org/obo/UBERON_0000065
T19 11256-11273 Body_part denotes respiratory tract http://purl.obolibrary.org/obo/UBERON_0000065
T20 11338-11344 Body_part denotes sputum http://purl.obolibrary.org/obo/UBERON_0007311
T21 11980-11985 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T22 12025-12030 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178
T23 12473-12490 Body_part denotes respiratory tract http://purl.obolibrary.org/obo/UBERON_0000065
T24 12527-12532 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T1 76-100 Disease denotes Coronavirus Disease 2019 http://purl.obolibrary.org/obo/MONDO_0100096
T2 123-147 Disease denotes coronavirus disease 2019 http://purl.obolibrary.org/obo/MONDO_0100096
T3 149-157 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T4 305-321 Disease denotes thoracic disease http://purl.obolibrary.org/obo/MONDO_0000651
T5 423-431 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T6 432-457 Disease denotes infection in the hospital http://purl.obolibrary.org/obo/MONDO_0043544
T7 432-441 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T8 565-573 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T9 732-740 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T10 1020-1028 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T11 1115-1123 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T12 1238-1246 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T13 1319-1327 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T14 1570-1578 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T15 1887-1895 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T16 2446-2454 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T17 2979-2989 Disease denotes infectious http://purl.obolibrary.org/obo/MONDO_0005550
T18 3128-3137 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T19 3377-3385 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T20 3815-3834 Disease denotes lung adenocarcinoma http://purl.obolibrary.org/obo/MONDO_0005061
T21 3820-3834 Disease denotes adenocarcinoma http://purl.obolibrary.org/obo/MONDO_0004970
T22 3989-4008 Disease denotes lung adenocarcinoma http://purl.obolibrary.org/obo/MONDO_0005061
T23 3994-4008 Disease denotes adenocarcinoma http://purl.obolibrary.org/obo/MONDO_0004970
T24 4090-4109 Disease denotes lung adenocarcinoma http://purl.obolibrary.org/obo/MONDO_0005061
T25 4095-4109 Disease denotes adenocarcinoma http://purl.obolibrary.org/obo/MONDO_0004970
T26 4200-4211 Disease denotes lung cancer http://purl.obolibrary.org/obo/MONDO_0008903
T27 4205-4211 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T28 4287-4307 Disease denotes lung adenocarcinomas http://purl.obolibrary.org/obo/MONDO_0005061
T29 4292-4307 Disease denotes adenocarcinomas http://purl.obolibrary.org/obo/MONDO_0004970
T30 4330-4349 Disease denotes lung adenocarcinoma http://purl.obolibrary.org/obo/MONDO_0005061
T31 4335-4349 Disease denotes adenocarcinoma http://purl.obolibrary.org/obo/MONDO_0004970
T32 4461-4480 Disease denotes lung adenocarcinoma http://purl.obolibrary.org/obo/MONDO_0005061
T33 4466-4480 Disease denotes adenocarcinoma http://purl.obolibrary.org/obo/MONDO_0004970
T34 4578-4583 Disease denotes tumor http://purl.obolibrary.org/obo/MONDO_0005070
T35 4849-4868 Disease denotes lung adenocarcinoma http://purl.obolibrary.org/obo/MONDO_0005061
T36 4854-4868 Disease denotes adenocarcinoma http://purl.obolibrary.org/obo/MONDO_0004970
T37 4928-4936 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T38 5046-5065 Disease denotes lung adenocarcinoma http://purl.obolibrary.org/obo/MONDO_0005061
T39 5051-5065 Disease denotes adenocarcinoma http://purl.obolibrary.org/obo/MONDO_0004970
T40 5209-5228 Disease denotes lung adenocarcinoma http://purl.obolibrary.org/obo/MONDO_0005061
T41 5214-5228 Disease denotes adenocarcinoma http://purl.obolibrary.org/obo/MONDO_0004970
T42 5260-5268 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T43 5344-5363 Disease denotes lung adenocarcinoma http://purl.obolibrary.org/obo/MONDO_0005061
T44 5349-5363 Disease denotes adenocarcinoma http://purl.obolibrary.org/obo/MONDO_0004970
T45 5401-5409 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T46 5445-5464 Disease denotes lung adenocarcinoma http://purl.obolibrary.org/obo/MONDO_0005061
T47 5450-5464 Disease denotes adenocarcinoma http://purl.obolibrary.org/obo/MONDO_0004970
T48 5544-5553 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T49 5666-5675 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T50 5687-5702 Disease denotes lipid pneumonia http://purl.obolibrary.org/obo/MONDO_0005826
T51 5693-5702 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T52 5729-5740 Disease denotes pneumonitis http://purl.obolibrary.org/obo/MONDO_0043905
T53 6040-6066 Disease denotes non-small-cell lung cancer http://purl.obolibrary.org/obo/MONDO_0005233
T54 6055-6066 Disease denotes lung cancer http://purl.obolibrary.org/obo/MONDO_0008903
T55 6060-6066 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T56 6701-6709 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T57 6867-6876 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T58 6924-6930 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T59 7090-7113 Disease denotes squamous cell carcinoma http://purl.obolibrary.org/obo/MONDO_0005096
T60 7104-7113 Disease denotes carcinoma http://purl.obolibrary.org/obo/MONDO_0004993
T61 7146-7152 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T62 7342-7348 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T63 7558-7564 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T64 7856-7862 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T65 7964-7973 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T66 7985-7993 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T67 8180-8203 Disease denotes squamous cell carcinoma http://purl.obolibrary.org/obo/MONDO_0005096
T68 8194-8203 Disease denotes carcinoma http://purl.obolibrary.org/obo/MONDO_0004993
T69 8531-8539 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T70 9406-9414 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T71 9590-9598 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T72 9599-9608 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T73 9720-9728 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T74 9729-9738 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T75 10286-10295 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T76 11735-11744 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T77 11993-12001 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T78 12073-12082 Disease denotes influenza http://purl.obolibrary.org/obo/MONDO_0005812
T79 12121-12130 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T80 12190-12198 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T81 12446-12465 Disease denotes bacterial pneumonia http://purl.obolibrary.org/obo/MONDO_0004652
T82 12456-12465 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T83 12502-12511 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T84 12591-12610 Disease denotes bacterial pneumonia http://purl.obolibrary.org/obo/MONDO_0004652
T85 12601-12610 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T86 12628-12663 Disease denotes acute respiratory distress syndrome http://purl.obolibrary.org/obo/MONDO_0006502
T87 12634-12663 Disease denotes respiratory distress syndrome http://purl.obolibrary.org/obo/MONDO_0009971
T88 12685-12703 Disease denotes pulmonary embolism http://purl.obolibrary.org/obo/MONDO_0005279
T89 12715-12723 Disease denotes volvulus http://purl.obolibrary.org/obo/MONDO_0004570
T90 12738-12747 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T91 12903-12911 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T92 12912-12921 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T93 12970-12978 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T94 13010-13018 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T95 13290-13298 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T96 13299-13320 Disease denotes infection in hospital http://purl.obolibrary.org/obo/MONDO_0043544
T97 13299-13308 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T1 213-223 http://purl.obolibrary.org/obo/UBERON_0001456 denotes are facing
T2 687-692 http://purl.obolibrary.org/obo/UBERON_0001456 denotes Faced
T3 828-829 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T4 852-858 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T5 1056-1057 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T6 1131-1134 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T7 1293-1295 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T8 1354-1355 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T9 1517-1519 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T10 1645-1650 http://purl.obolibrary.org/obo/UBERON_0000473 denotes tests
T11 2420-2432 http://purl.obolibrary.org/obo/OBI_0000245 denotes Organization
T12 2433-2436 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T13 2455-2456 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T14 2640-2641 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T15 3150-3151 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T16 3621-3626 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T17 3658-3661 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T18 3815-3819 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T19 3815-3819 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T20 3989-3993 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T21 3989-3993 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T22 4090-4094 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T23 4090-4094 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T24 4144-4151 http://purl.obolibrary.org/obo/UBERON_0003100 denotes females
T25 4200-4204 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T26 4200-4204 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T27 4228-4233 http://purl.obolibrary.org/obo/UBERON_0003101 denotes males
T28 4228-4233 http://www.ebi.ac.uk/efo/EFO_0000970 denotes males
T29 4287-4291 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T30 4287-4291 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T31 4330-4334 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T32 4330-4334 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T33 4461-4465 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T34 4461-4465 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T35 4742-4744 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T36 4814-4815 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T37 4849-4853 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T38 4849-4853 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T39 5046-5050 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T40 5046-5050 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T41 5209-5213 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T42 5209-5213 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T43 5344-5348 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T44 5344-5348 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T45 5369-5370 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T46 5445-5449 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T47 5445-5449 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T48 5642-5646 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T49 5642-5646 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T50 6050-6054 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T51 6055-6059 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T52 6055-6059 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T53 6746-6747 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T54 6808-6810 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T55 7099-7103 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T56 7646-7647 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T57 7864-7866 http://purl.obolibrary.org/obo/CLO_0050507 denotes 22
T58 8189-8193 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T59 8486-8487 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T60 8889-8890 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T61 9254-9255 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T62 10502-10506 http://purl.obolibrary.org/obo/UBERON_0000473 denotes test
T63 10592-10593 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T64 10685-10686 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T65 10741-10764 http://purl.obolibrary.org/obo/UBERON_0001558 denotes lower respiratory tract
T66 10786-10792 http://purl.obolibrary.org/obo/UBERON_0000473 denotes tested
T67 11128-11129 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T68 11381-11382 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T69 11444-11451 http://purl.obolibrary.org/obo/OBI_0000968 denotes devices
T70 11519-11526 http://purl.obolibrary.org/obo/OBI_0000968 denotes devices
T71 11712-11713 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T72 11723-11727 http://purl.obolibrary.org/obo/UBERON_0000473 denotes test
T73 11898-11899 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T74 11978-11979 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T75 11980-11985 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T76 12025-12030 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood
T77 12025-12030 http://www.ebi.ac.uk/efo/EFO_0000296 denotes blood
T78 12083-12084 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T79 12089-12090 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T80 12145-12146 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T81 12181-12185 http://purl.obolibrary.org/obo/UBERON_0000473 denotes test
T82 12257-12258 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T83 12264-12268 http://purl.obolibrary.org/obo/UBERON_0000473 denotes test
T84 12527-12532 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T85 12841-12842 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T1 5687-5692 Chemical denotes lipid http://purl.obolibrary.org/obo/CHEBI_18059
T2 6020-6022 Chemical denotes N2 http://purl.obolibrary.org/obo/CHEBI_17997
T3 6133-6135 Chemical denotes N2 http://purl.obolibrary.org/obo/CHEBI_17997
T4 6766-6774 Chemical denotes positron http://purl.obolibrary.org/obo/CHEBI_30225
T5 7772-7780 Chemical denotes adjuvant http://purl.obolibrary.org/obo/CHEBI_60809
T6 12049-12056 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
1 76-100 Disease denotes Coronavirus Disease 2019 MESH:C000657245
15 291-299 Species denotes patients Tax:9606
16 532-540 Species denotes patients Tax:9606
17 677-685 Species denotes patients Tax:9606
18 852-858 Species denotes humans Tax:9606
19 123-147 Disease denotes coronavirus disease 2019 MESH:C000657245
20 149-157 Disease denotes COVID-19 MESH:C000657245
21 305-321 Disease denotes thoracic disease MESH:D013896
22 423-431 Disease denotes COVID-19 MESH:C000657245
23 432-441 Disease denotes infection MESH:D007239
24 565-573 Disease denotes COVID-19 MESH:C000657245
25 654-662 Disease denotes infected MESH:D007239
26 732-740 Disease denotes COVID-19 MESH:C000657245
27 1020-1028 Disease denotes COVID-19 MESH:C000657245
44 1296-1304 Species denotes patients Tax:9606
45 1420-1428 Species denotes patients Tax:9606
46 1520-1528 Species denotes patients Tax:9606
47 1707-1715 Species denotes patients Tax:9606
48 1743-1751 Species denotes patients Tax:9606
49 1115-1123 Disease denotes COVID-19 MESH:C000657245
50 1238-1246 Disease denotes COVID-19 MESH:C000657245
51 1305-1313 Disease denotes infected MESH:D007239
52 1319-1327 Disease denotes COVID-19 MESH:C000657245
53 1556-1564 Disease denotes infected MESH:D007239
54 1570-1578 Disease denotes COVID-19 MESH:C000657245
55 1721-1730 Disease denotes mortality MESH:D003643
56 1734-1742 Disease denotes infected MESH:D007239
57 1830-1839 Disease denotes mortality MESH:D003643
58 1874-1883 Disease denotes mortality MESH:D003643
59 1887-1904 Disease denotes COVID-19-infected MESH:C000657245
71 2746-2754 Species denotes patients Tax:9606
72 2966-2974 Species denotes patients Tax:9606
73 3049-3057 Species denotes patients Tax:9606
74 3309-3317 Species denotes patients Tax:9606
75 3409-3416 Species denotes patient Tax:9606
76 2446-2454 Disease denotes COVID-19 MESH:C000657245
77 3105-3137 Disease denotes sudden acceleration of infection MESH:D003645
78 3173-3178 Disease denotes fever MESH:D005334
79 3180-3185 Disease denotes cough MESH:D003371
80 3190-3209 Disease denotes shortness of breath MESH:D004417
81 3377-3385 Disease denotes COVID-19 MESH:C000657245
106 3562-3570 Species denotes patients Tax:9606
107 5687-5692 Chemical denotes lipid MESH:D008055
108 3815-3834 Disease denotes lung adenocarcinoma MESH:D000077192
109 3947-3953 Disease denotes tumour MESH:D009369
110 3989-4008 Disease denotes lung adenocarcinoma MESH:D000077192
111 4090-4109 Disease denotes lung adenocarcinoma MESH:D000077192
112 4200-4211 Disease denotes lung cancer MESH:D008175
113 4287-4307 Disease denotes lung adenocarcinomas MESH:D000077192
114 4330-4349 Disease denotes lung adenocarcinoma MESH:D000077192
115 4461-4480 Disease denotes lung adenocarcinoma MESH:D000077192
116 4578-4583 Disease denotes tumor MESH:D009369
117 4734-4740 Disease denotes tumour MESH:D009369
118 4849-4868 Disease denotes lung adenocarcinoma MESH:D000077192
119 4928-4936 Disease denotes COVID-19 MESH:C000657245
120 5046-5065 Disease denotes lung adenocarcinoma MESH:D000077192
121 5209-5228 Disease denotes lung adenocarcinoma MESH:D000077192
122 5260-5268 Disease denotes COVID-19 MESH:C000657245
123 5344-5363 Disease denotes lung adenocarcinoma MESH:D000077192
124 5401-5409 Disease denotes COVID-19 MESH:C000657245
125 5445-5464 Disease denotes lung adenocarcinoma MESH:D000077192
126 5544-5553 Disease denotes infection MESH:D007239
127 5666-5675 Disease denotes pneumonia MESH:D011014
128 5693-5702 Disease denotes pneumonia MESH:D011014
129 5729-5740 Disease denotes pneumonitis MESH:D011014
135 6082-6090 Species denotes patients Tax:9606
136 6270-6278 Species denotes Patients Tax:9606
137 6055-6066 Disease denotes lung cancer MESH:D008175
138 6701-6709 Disease denotes COVID-19 MESH:C000657245
139 6867-6876 Disease denotes infection MESH:D007239
154 7299-7307 Species denotes patients Tax:9606
155 7918-7926 Species denotes patients Tax:9606
156 7944-7952 Species denotes patients Tax:9606
157 6924-6930 Disease denotes cancer MESH:D009369
158 7090-7113 Disease denotes squamous cell carcinoma MESH:D002294
159 7146-7152 Disease denotes cancer MESH:D009369
160 7176-7183 Disease denotes cancers MESH:D009369
161 7342-7348 Disease denotes cancer MESH:D009369
162 7546-7564 Disease denotes oesophageal cancer MESH:D009369
163 7856-7862 Disease denotes cancer MESH:D009369
164 7964-7973 Disease denotes infection MESH:D007239
165 7985-7993 Disease denotes COVID-19 MESH:C000657245
166 8168-8203 Disease denotes oesophageal squamous cell carcinoma MESH:D002294
167 8531-8539 Disease denotes COVID-19 MESH:C000657245
170 9369-9377 Species denotes PATIENTS Tax:9606
171 9406-9414 Disease denotes COVID-19 MESH:C000657245
183 9683-9691 Species denotes patients Tax:9606
184 9921-9929 Species denotes patients Tax:9606
185 9992-10000 Species denotes Patients Tax:9606
186 10246-10254 Species denotes patients Tax:9606
187 10550-10558 Species denotes patients Tax:9606
188 10671-10679 Species denotes patients Tax:9606
189 9590-9598 Disease denotes COVID-19 MESH:C000657245
190 9599-9608 Disease denotes infection MESH:D007239
191 9720-9728 Disease denotes COVID-19 MESH:C000657245
192 9729-9738 Disease denotes infection MESH:D007239
193 10286-10295 Disease denotes infection MESH:D007239
196 10897-10909 Species denotes participants Tax:9606
197 11735-11744 Disease denotes infection MESH:D007239
205 12038-12056 Gene denotes C-reactive protein Gene:1401
206 11773-11781 Species denotes patients Tax:9606
207 11957-11965 Species denotes patients Tax:9606
208 12233-12241 Species denotes patients Tax:9606
209 11993-12001 Disease denotes COVID-19 MESH:C000657245
210 12121-12130 Disease denotes infection MESH:D007239
211 12190-12198 Disease denotes COVID-19 MESH:C000657245
230 12384-12392 Species denotes patients Tax:9606
231 12285-12304 Disease denotes Postoperative fever MESH:D005334
232 12306-12325 Disease denotes shortness of breath MESH:D004417
233 12330-12335 Disease denotes cough MESH:D003371
234 12394-12399 Disease denotes Fever MESH:D005334
235 12456-12465 Disease denotes pneumonia MESH:D011014
236 12494-12511 Disease denotes pleural infection MESH:D010995
237 12513-12542 Disease denotes Postoperative chest tightness MESH:D002637
238 12547-12566 Disease denotes shortness of breath MESH:D004417
239 12591-12610 Disease denotes bacterial pneumonia MESH:D016920
240 12628-12663 Disease denotes acute respiratory distress syndrome MESH:D012128
241 12685-12703 Disease denotes pulmonary embolism MESH:D011655
242 12705-12723 Disease denotes pulmonary volvulus MESH:D045822
243 12738-12747 Disease denotes pneumonia MESH:D011014
244 12767-12774 Disease denotes fistula MESH:D005402
245 12903-12911 Disease denotes COVID-19 MESH:C000657245
246 12912-12921 Disease denotes infection MESH:D007239
247 12970-12978 Disease denotes COVID-19 MESH:C000657245
253 13010-13018 Disease denotes COVID-19 MESH:C000657245
254 13072-13086 Disease denotes benign tumours MESH:D009369
255 13097-13109 Disease denotes malignancies MESH:D009369
256 13290-13298 Disease denotes COVID-19 MESH:C000657245
257 13299-13308 Disease denotes infection MESH:D007239

TEST0

Id Subject Object Predicate Lexical cue
32496537-180-186-6064 4433-4435 ["28183483"] denotes 10
32496537-96-102-6065 4742-4744 ["27107787"] denotes 11
32496537-233-239-6066 5420-5422 ["29427615"] denotes 12
32496537-41-47-6067 5864-5866 ["26997100"] denotes 13
32496537-136-142-6068 5959-5961 ["29174310"] denotes 14
32496537-140-146-6069 6208-6210 ["22570291"] denotes 15
32496537-161-167-6070 6431-6433 ["28885881"] denotes 16
32496537-141-147-6071 6676-6678 ["19632716"] denotes 17
32496537-220-226-6072 7454-7456 ["26254683"] denotes 20
32496537-224-230-6073 7458-7460 ["30089078"] denotes 21
32496537-224-230-6074 8429-8431 ["17401004"] denotes 23

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T1 3173-3178 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T2 3180-3185 Phenotype denotes cough http://purl.obolibrary.org/obo/HP_0012735
T3 3190-3209 Phenotype denotes shortness of breath http://purl.obolibrary.org/obo/HP_0002098
T4 3815-3834 Phenotype denotes lung adenocarcinoma http://purl.obolibrary.org/obo/HP_0030078
T5 3947-3953 Phenotype denotes tumour http://purl.obolibrary.org/obo/HP_0002664
T6 3989-4008 Phenotype denotes lung adenocarcinoma http://purl.obolibrary.org/obo/HP_0030078
T7 4090-4109 Phenotype denotes lung adenocarcinoma http://purl.obolibrary.org/obo/HP_0030078
T8 4200-4211 Phenotype denotes lung cancer http://purl.obolibrary.org/obo/HP_0100526
T9 4287-4307 Phenotype denotes lung adenocarcinomas http://purl.obolibrary.org/obo/HP_0030078
T10 4330-4349 Phenotype denotes lung adenocarcinoma http://purl.obolibrary.org/obo/HP_0030078
T11 4461-4480 Phenotype denotes lung adenocarcinoma http://purl.obolibrary.org/obo/HP_0030078
T12 4578-4583 Phenotype denotes tumor http://purl.obolibrary.org/obo/HP_0002664
T13 4734-4740 Phenotype denotes tumour http://purl.obolibrary.org/obo/HP_0002664
T14 4849-4868 Phenotype denotes lung adenocarcinoma http://purl.obolibrary.org/obo/HP_0030078
T15 5046-5065 Phenotype denotes lung adenocarcinoma http://purl.obolibrary.org/obo/HP_0030078
T16 5209-5228 Phenotype denotes lung adenocarcinoma http://purl.obolibrary.org/obo/HP_0030078
T17 5344-5363 Phenotype denotes lung adenocarcinoma http://purl.obolibrary.org/obo/HP_0030078
T18 5445-5464 Phenotype denotes lung adenocarcinoma http://purl.obolibrary.org/obo/HP_0030078
T19 5623-5634 Phenotype denotes haemoptysis http://purl.obolibrary.org/obo/HP_0002105
T20 5666-5675 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T21 5693-5702 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T22 6040-6066 Phenotype denotes non-small-cell lung cancer http://purl.obolibrary.org/obo/HP_0030358
T23 6924-6930 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664
T24 7090-7113 Phenotype denotes squamous cell carcinoma http://purl.obolibrary.org/obo/HP_0002860
T25 7146-7152 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664
T26 7342-7348 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664
T27 7558-7564 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664
T28 7856-7862 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664
T29 8180-8203 Phenotype denotes squamous cell carcinoma http://purl.obolibrary.org/obo/HP_0002860
T30 12299-12304 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T31 12306-12325 Phenotype denotes shortness of breath http://purl.obolibrary.org/obo/HP_0002098
T32 12330-12335 Phenotype denotes cough http://purl.obolibrary.org/obo/HP_0012735
T33 12394-12399 Phenotype denotes Fever http://purl.obolibrary.org/obo/HP_0001945
T34 12456-12465 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T35 12527-12542 Phenotype denotes chest tightness http://purl.obolibrary.org/obo/HP_0031352
T36 12547-12566 Phenotype denotes shortness of breath http://purl.obolibrary.org/obo/HP_0002098
T37 12601-12610 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T38 12612-12623 Phenotype denotes atelectasis http://purl.obolibrary.org/obo/HP_0100750
T39 12634-12654 Phenotype denotes respiratory distress http://purl.obolibrary.org/obo/HP_0002098
T40 12685-12703 Phenotype denotes pulmonary embolism http://purl.obolibrary.org/obo/HP_0002204
T41 12715-12723 Phenotype denotes volvulus http://purl.obolibrary.org/obo/HP_0002580
T42 12738-12747 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T1 3920-3930 http://purl.obolibrary.org/obo/GO_0007610 denotes behaviours
T2 4397-4403 http://purl.obolibrary.org/obo/GO_0040007 denotes growth
T3 10297-10318 http://purl.obolibrary.org/obo/GO_0001171 denotes reverse transcription
T4 10305-10318 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T5 10765-10775 http://purl.obolibrary.org/obo/GO_0046903 denotes secretions

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T1 0-28 Sentence denotes Thoracic surgeons’ insights:
T2 29-109 Sentence denotes Improving thoracic surgery outcomes during the Coronavirus Disease 2019 pandemic
T3 111-249 Sentence denotes At present, coronavirus disease 2019 (COVID-19) is raging worldwide, and almost all thoracic surgeons are facing unprecedented challenges:
T4 250-391 Sentence denotes In this special period, how can we treat patients with thoracic disease safely and, particularly, how can we perform thoracic surgery safely?
T5 392-488 Sentence denotes In addition, how do we prevent COVID-19 infection in the hospital and protect medical personnel?
T6 489-686 Sentence denotes Other questions we must answer are whether patients are more susceptible to COVID-19 after thoracic surgery and what are the clinical manifestations and outcomes of infected postoperative patients.
T7 687-892 Sentence denotes Faced with the global public health issue of COVID-19, every medical worker is responsible and obligated to share experiences and lessons in a timely manner to help humans through the present difficulties.
T8 893-1029 Sentence denotes Therefore, we strongly support our colleagues from China in their effort to share their experiences and lessons from combating COVID-19.
T9 1030-1247 Sentence denotes Peng et al. [1] performed a cohort study from the area with global high incidence of COVID-19, which has important reference value for guiding the daily work of thoracic surgery in the current environment of COVID-19.
T10 1248-1404 Sentence denotes Peng et al. [1] reported their experience of 11 patients infected with COVID-19 after thoracic surgery in a high-volume centre in China during the pandemic.
T11 1405-1501 Sentence denotes There were 205 patients admitted, including 119 cases with surgery and 86 cases without surgery.
T12 1502-1583 Sentence denotes After surgery, 11 patients and 8 medical workers were infected with COVID-19 [2].
T13 1584-1716 Sentence denotes The investigators analysed the clinical symptoms, laboratory tests, imaging manifestations and treatment outcomes of these patients.
T14 1717-1959 Sentence denotes The mortality of infected patients after thoracic surgery was 27.3%, which was 10 times higher than the usual 2% mortality [3] and also higher than the 4.3% mortality of COVID-19-infected cases without surgery according to another report [4].
T15 1960-2049 Sentence denotes On the basis of these data, we must adjust our daily work to meet the current challenges.
T16 2050-2227 Sentence denotes Although the risk levels vary from region to region, and the measures taken are also different, it is difficult for one recommendation to cover the scope of all medical centres.
T17 2228-2380 Sentence denotes Nevertheless, the recommendations we are proposing should have certain reference value and warning function to thoracic surgeons from different regions.
T18 2382-2402 Sentence denotes UNIVERSAL PRECAUTION
T19 2403-2492 Sentence denotes The World Health Organization has declared COVID-19 a global health concern and pandemic.
T20 2493-2695 Sentence denotes Because the economic development, medical resources and clinical practice of different regions are not the same, ‘universal precaution’ could have a different context while the concept remains the same.
T21 2696-2924 Sentence denotes This point is important, thus we suggest that all patients who come to the hospital for surgery be treated under the ‘universal precaution’ principle on the premise of enough supplies, particularly in the centre of the epidemic.
T22 2925-3062 Sentence denotes Studies also show that many asymptomatic patients are infectious, and their infectivity is no less than that of symptomatic patients [5].
T23 3063-3138 Sentence denotes In addition, there is the possibility for sudden acceleration of infection.
T24 3139-3322 Sentence denotes Therefore, a simple inquiry about fever, cough and shortness of breath in the past 2 weeks and any history of recent wildlife contact cannot help us identify problematic patients [6].
T25 3323-3417 Sentence denotes It is more reasonable to use universal precaution for COVID-19 screening of every new patient.
T26 3419-3451 Sentence denotes RESTRICTING SURGICAL INDICATIONS
T27 3452-3763 Sentence denotes Although Peng et al. [1] did not provide detailed information about the specific diseases of the 119 surgical patients, evaluating ground glass opacities (GGOs) seen on chest computed tomography (CT) scans has become an important part of clinical practice of some, perhaps many, thoracic surgery teams in China.
T28 3764-3881 Sentence denotes Numerous studies have proved that the incidence of lung adenocarcinoma presented as GGO on CT is increasing recently.
T29 3882-4047 Sentence denotes Some clinical features and biological behaviours of this kind of tumour are different from the traditional lung adenocarcinoma presented as solid nodules on imaging.
T30 4048-4252 Sentence denotes For example, studies showed that GGO-like lung adenocarcinoma is more common in Asian and young females than in the traditional high-risk population of lung cancer, such as senior males and smokers [7–9].
T31 4253-4437 Sentence denotes Different from conventional solid lung adenocarcinomas, this special type of lung adenocarcinoma, which emerged 20 years ago, exhibits indolent growth as its most obvious feature [10].
T32 4438-4558 Sentence denotes Moreover, the pure GGO lung adenocarcinoma as screened by low-dose CT in asymptomatic population grows even more slowly.
T33 4559-4645 Sentence denotes In the 8th edition tumor-node-metastasis staging system, it is classified as c0 stage.
T34 4646-4746 Sentence denotes For semi-solid GGO, T is calculated based on the diameter of the solid component of the tumour [11].
T35 4747-4876 Sentence denotes In addition, data support the conclusion that the GGO component is a favourable prognostic factor for lung adenocarcinoma [8, 9].
T36 4877-4983 Sentence denotes Coincidentally, the early imaging manifestation of COVID-19 is also predominantly ground glass shadow [1].
T37 4984-5141 Sentence denotes Although there are some distinguishing features with GGO-like lung adenocarcinoma, it is still necessary to attach great importance to possible misdiagnosis.
T38 5142-5424 Sentence denotes In view of the indolence and relatively good prognosis of GGO-like lung adenocarcinoma, in the current environment of COVID-19 pandemic, we call for the cessation of all thoracic surgeries for GGO-like lung adenocarcinoma with a diameter of ˂30 mm during the COVID-19 pandemic [12].
T39 5425-5741 Sentence denotes Of course, GGO-like lung adenocarcinoma should also be differentiated from other benign diseases, to avoid the risk of infection caused by unnecessary surgery, such as ground-glass shadow caused by haemoptysis in the lung, radiation induced pneumonia, exogenous lipid pneumonia and immunotherapy-related pneumonitis.
T40 5743-5822 Sentence denotes ENHANCING PREOPERATIVE INDUCTION TREATMENT AND INITIATING ALTERNATIVE TREATMENT
T41 5823-6067 Sentence denotes According to the survey of Rocco et al. [13] in Europe and North America, as well as the data of the ADJUVANT/CTONG1104 study in China [14], there are large treatment strategy differences for IIIA-N2 locally advanced non-small-cell lung cancer.
T42 6068-6269 Sentence denotes Certainly, in patients in whom surgery may be indicated for IIIA-N2, surgery should follow preoperative chemotherapy for oncologic reasons [15], and delay the surgery beyond the window of the pandemic.
T43 6270-6534 Sentence denotes Patients who might be considered marginal candidates for surgery might be treated with chemoradiation followed by immunotherapy, according to the PACIFIC trial [16], avoiding the risks of hospitalization during the pandemic without compromising treatment for cure.
T44 6535-6680 Sentence denotes There was no statistically significant difference in overall survival between chemoradiotherapy alone versus chemoradiotherapy plus surgery [17].
T45 6681-6899 Sentence denotes As well, during the COVID-19 pandemic, clinicians should rely to a greater extent on positron emission tomography for staging [18], to replace invasive biopsies and reduce the chance of infection among medical workers.
T46 6900-7079 Sentence denotes Conversely, oesophageal cancer is an important disease in the clinical practice of thoracic surgery, and oesophagectomy is the earliest and most important treatment method so far.
T47 7080-7233 Sentence denotes In China, squamous cell carcinoma accounts for 90% of oesophageal cancer [19], and 90% of these cancers show locally advanced disease at the first visit.
T48 7234-7462 Sentence denotes There is strong clinical evidence that the long-term survival of patients with locally advanced oesophageal cancer is significantly better with induction chemoradiation followed by surgery compared with upfront surgery [20, 21].
T49 7463-7751 Sentence denotes However, in clinical practice in China, preoperative treatment of locally advanced oesophageal cancer is not universal because of different understanding of multimodality treatments, a lack of multi-disciplinary cooperation and unbalanced deployment of radiation technology and equipment.
T50 7752-8003 Sentence denotes Thus, postoperative adjuvant treatment accounts for ˃50% of the comprehensive treatment for oesophageal cancer [22], which not only affects the long-term survival of patients, but also places patients at risk of infection during the COVID-19 pandemic.
T51 8004-8204 Sentence denotes Preoperative induction chemoradiotherapy improves the curative effect of surgery, and some scholars even question the role of surgery in comprehensive treatment of oesophageal squamous cell carcinoma.
T52 8205-8433 Sentence denotes These specialists concluded that overall survival after concurrent chemoradiation was not statistically different from survival after trimodality therapy, therefore, concurrent chemoradiation could replace surgery entirely [23].
T53 8434-8621 Sentence denotes Although this viewpoint is controversial because of a lack of strong evidence, under the current COVID-19 pandemic situation, we should more strictly consider the indications for surgery.
T54 8622-8822 Sentence denotes We should choose more conservative treatments for seniors, those with severe comorbidities, and those with advanced disease, to decrease the risks associated with surgery under this special situation.
T55 8823-8942 Sentence denotes Conversely, we have noticed that preoperative radiation dosage is a controversial issue in preoperative chemoradiation.
T56 8943-9084 Sentence denotes In fact, the ‘curative’ radiation dosage in Asian countries is similar to the ‘preoperative induction’ radiation dosage in western countries.
T57 9085-9314 Sentence denotes In this special period, we might as well give ‘curative’ concurrent chemoradiotherapy (radiation dose similar to the Western preoperative dose), and consider surgery in a ‘salvage’ situation after close observation and follow-up.
T58 9316-9424 Sentence denotes PROTECTION PROTOCOLS DURING EMERGENCY OPERATIONS FOR PATIENTS WITH CONFIRMED OR SUSPECTED COVID-19 INFECTION
T59 9425-9496 Sentence denotes We can and should try to avoid elective operations during the outbreak.
T60 9497-9609 Sentence denotes However, we cannot avoid emergency surgery, even for individuals with confirmed or suspected COVID-19 infection.
T61 9610-9872 Sentence denotes In these circumstances, all medical workers participating in the care of patients with confirmed or suspected COVID-19 infection need three-level protection, including medical masks, protective clothing, goggles/protective masks, double gloves, shoe covers, etc.
T62 9873-9991 Sentence denotes All staff who participated in the care of these patients should undergo medical observation for 14 days after surgery.
T63 9992-10158 Sentence denotes Patients undergoing emergency surgery should remain isolated from the preoperative preparation stage to postoperative treatment, and they must wear masks at all time.
T64 10159-10494 Sentence denotes For operations in the central areas with continuous outbreak of the epidemic, even for patients without confirmed or suspected infection, reverse transcription polymerase chain reaction of samples taken from upper naso-pharyngeal swabs should be performed and preoperative preparations should be made immediately before the operations.
T65 10495-10666 Sentence denotes If the test result is negative, it is recommended that patients remain in an isolation ward, and a three-level protection protocol should be adopted during the operations.
T66 10667-10799 Sentence denotes For patients with a negative result before surgery, after intubation, the lower respiratory tract secretions should be tested again.
T67 10800-10927 Sentence denotes Surgery shall be performed in an independent negative pressure operating room, and the number of participants shall be limited.
T68 10928-11003 Sentence denotes After entering the operating room, no one shall enter or leave arbitrarily.
T69 11004-11077 Sentence denotes All supplies shall be in the charge of nurses outside the operating room.
T70 11078-11127 Sentence denotes Intubation should be performed after anaesthesia.
T71 11128-11274 Sentence denotes A disposable filter should be arranged between the tracheal intubation and the respiratory tract to reduce contamination of the respiratory tract.
T72 11275-11402 Sentence denotes More attention should be devoted to protection when suctioning sputum, and suction should be performed in a closed environment.
T73 11403-11527 Sentence denotes During the operations, the use of energy devices and energy power should be reduced, to limit aerosol caused by the devices.
T74 11528-11603 Sentence denotes For examination, surgical specimens should be sealed in double-layered bag.
T75 11604-11767 Sentence denotes After surgery, the operating room should be disinfected thoroughly, and it can be reused only after passing a sampling test by the infection management department.
T76 11768-11930 Sentence denotes Some patients undergoing elective surgery who could not wait for too long because of the disease condition, should be observed in a transitional ward for 2 weeks.
T77 11931-12117 Sentence denotes Two weeks before surgery, patients should have a chest CT for COVID-19 screening, and routine blood assay, C-reactive protein, procalcitonin, influenza A and B examination within 1 week.
T78 12118-12219 Sentence denotes If infection is suspected, a further upper nasopharyngeal swab test for COVID-19 should be performed.
T79 12220-12284 Sentence denotes In fact, all patients should undergo a swab test before surgery.
T80 12285-12393 Sentence denotes Postoperative fever, shortness of breath and cough are common clinical manifestations for surgical patients.
T81 12394-12512 Sentence denotes Fever can be caused by postoperative absorption and bacterial pneumonia of the respiratory tract or pleural infection.
T82 12513-12664 Sentence denotes Postoperative chest tightness and shortness of breath are also common, due to bacterial pneumonia, atelectasis and acute respiratory distress syndrome.
T83 12665-12775 Sentence denotes Rare causes include pulmonary embolism, pulmonary volvulus, interstitial pneumonia and bronchopleural fistula.
T84 12776-12857 Sentence denotes These cases should be identified carefully and differentiated in a timely manner.
T85 12858-12979 Sentence denotes In addition, because of symptom overlap with COVID-19 infection, these conditions should be differentiated from COVID-19.
T86 12980-13087 Sentence denotes In the context of the current COVID-19 pandemic, thoracic surgeons should avoid surgery for benign tumours.
T87 13088-13359 Sentence denotes Even for malignancies, strict control of the indications for operations is recommended, comprehensive treatment should be emphasized, and alternative treatment strategies should be implemented to avoid COVID-19 infection in hospital and ensure medical safety and quality.
T88 13360-13396 Sentence denotes Conflict of interest: none declared.

MyTest

Id Subject Object Predicate Lexical cue
32496537-28183483-28904377 4433-4435 28183483 denotes 10
32496537-27107787-28904378 4742-4744 27107787 denotes 11
32496537-29427615-28904379 5420-5422 29427615 denotes 12
32496537-26997100-28904380 5864-5866 26997100 denotes 13
32496537-29174310-28904381 5959-5961 29174310 denotes 14
32496537-22570291-28904382 6208-6210 22570291 denotes 15
32496537-28885881-28904383 6431-6433 28885881 denotes 16
32496537-19632716-28904384 6676-6678 19632716 denotes 17
32496537-26254683-28904385 7454-7456 26254683 denotes 20
32496537-30089078-28904386 7458-7460 30089078 denotes 21
32496537-17401004-28904387 8429-8431 17401004 denotes 23

0_colil

Id Subject Object Predicate Lexical cue
32496537-28183483-6064 4433-4435 28183483 denotes 10
32496537-27107787-6065 4742-4744 27107787 denotes 11
32496537-29427615-6066 5420-5422 29427615 denotes 12
32496537-26997100-6067 5864-5866 26997100 denotes 13
32496537-29174310-6068 5959-5961 29174310 denotes 14
32496537-22570291-6069 6208-6210 22570291 denotes 15
32496537-28885881-6070 6431-6433 28885881 denotes 16
32496537-19632716-6071 6676-6678 19632716 denotes 17
32496537-26254683-6072 7454-7456 26254683 denotes 20
32496537-30089078-6073 7458-7460 30089078 denotes 21
32496537-17401004-6074 8429-8431 17401004 denotes 23

2_test

Id Subject Object Predicate Lexical cue
32496537-28183483-28904377 4433-4435 28183483 denotes 10
32496537-27107787-28904378 4742-4744 27107787 denotes 11
32496537-29427615-28904379 5420-5422 29427615 denotes 12
32496537-26997100-28904380 5864-5866 26997100 denotes 13
32496537-29174310-28904381 5959-5961 29174310 denotes 14
32496537-22570291-28904382 6208-6210 22570291 denotes 15
32496537-28885881-28904383 6431-6433 28885881 denotes 16
32496537-19632716-28904384 6676-6678 19632716 denotes 17
32496537-26254683-28904385 7454-7456 26254683 denotes 20
32496537-30089078-28904386 7458-7460 30089078 denotes 21
32496537-17401004-28904387 8429-8431 17401004 denotes 23