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PMC:7309518 / 699-1472 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T4 442-453 Body_part denotes ganglioside http://purl.org/sig/ont/fma/fma82816
T5 535-542 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T6 580-593 Body_part denotes glycoproteins http://purl.org/sig/ont/fma/fma62925
T7 598-602 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T8 711-723 Body_part denotes gangliosides http://purl.org/sig/ont/fma/fma82816
T9 728-744 Body_part denotes peripheral nerve http://purl.org/sig/ont/fma/fma65239
T10 745-756 Body_part denotes glycolipids http://purl.org/sig/ont/fma/fma82780

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T2 739-744 Body_part denotes nerve http://purl.obolibrary.org/obo/UBERON_0001021

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T18 180-183 Disease denotes GBS http://purl.obolibrary.org/obo/MONDO_0016218
T19 185-202 Disease denotes encephalomyelitis http://purl.obolibrary.org/obo/MONDO_0005156
T20 206-214 Disease denotes myositis http://purl.obolibrary.org/obo/MONDO_0008054|http://purl.obolibrary.org/obo/MONDO_0021167
T22 288-296 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T23 298-305 Disease denotes Anosmia http://purl.obolibrary.org/obo/MONDO_0010528
T24 322-342 Disease denotes cranial neuropathies http://purl.obolibrary.org/obo/MONDO_0003569
T25 347-362 Disease denotes lymphocytopenia http://purl.obolibrary.org/obo/MONDO_0003783
T26 418-440 Disease denotes Miller-Fisher Syndrome http://purl.obolibrary.org/obo/MONDO_0005851
T27 520-528 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T28 657-667 Disease denotes neuropathy http://purl.obolibrary.org/obo/MONDO_0005244
T29 694-702 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T3 598-602 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T4 728-744 http://purl.obolibrary.org/obo/UBERON_0001021 denotes peripheral nerve

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T3 442-453 Chemical denotes ganglioside http://purl.obolibrary.org/obo/CHEBI_28892
T4 473-477 Chemical denotes GD1b http://purl.obolibrary.org/obo/CHEBI_28175
T5 535-542 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T6 557-568 Chemical denotes sialic acid http://purl.obolibrary.org/obo/CHEBI_26667
T7 564-568 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T8 580-593 Chemical denotes glycoproteins http://purl.obolibrary.org/obo/CHEBI_17089
T9 618-622 Chemical denotes GD1b http://purl.obolibrary.org/obo/CHEBI_28175
T10 711-723 Chemical denotes gangliosides http://purl.obolibrary.org/obo/CHEBI_28892
T11 745-756 Chemical denotes glycolipids http://purl.obolibrary.org/obo/CHEBI_33563

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
50 124-131 Species denotes patient Tax:9606
51 371-376 Species denotes flags Tax:34205
54 442-453 Chemical denotes ganglioside MESH:D005732
55 557-568 Chemical denotes sialic acid MESH:D019158
56 711-723 Chemical denotes gangliosides MESH:D005732
57 745-756 Chemical denotes glycolipids MESH:D006017
61 151-174 Disease denotes acute paralytic disease MESH:D000208
62 185-202 Disease denotes encephalomyelitis MESH:D004679
63 206-214 Disease denotes myositis MESH:D009220
64 288-296 Disease denotes COVID-19 MESH:C000657245
65 307-314 Disease denotes ageusia MESH:D000370
66 322-342 Disease denotes cranial neuropathies MESH:D003389
67 347-362 Disease denotes lymphocytopenia MESH:D008231
68 418-440 Disease denotes Miller-Fisher Syndrome MESH:D019846
69 520-528 Disease denotes COVID-19 MESH:C000657245
70 650-667 Disease denotes ataxic neuropathy MESH:D001039
71 694-702 Disease denotes COVID-19 MESH:C000657245

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T10 65-72 Sentence denotes Results
T11 73-297 Sentence denotes Collective data indicate that in this pandemic any patient presenting with an acute paralytic disease-like GBS, encephalomyelitis or myositis-even without systemic symptoms, may represent the first manifestation of COVID-19.
T12 298-414 Sentence denotes Anosmia, ageusia, other cranial neuropathies and lymphocytopenia are red flags enhancing early diagnostic suspicion.
T13 415-771 Sentence denotes In Miller-Fisher Syndrome, ganglioside antibodies against GD1b, instead of QG1b, were found; because the COVID-19 spike protein also binds to sialic acid-containing glycoproteins for cell-entry and anti-GD1b antibodies typically cause ataxic neuropathy, cross-reactivity between COVID-19–bearing gangliosides and peripheral nerve glycolipids was addressed.

LitCovid-PD-GlycoEpitope

Id Subject Object Predicate Lexical cue glyco_epitope_db_id
T1 473-477 GlycoEpitope denotes GD1b http://www.glycoepitope.jp/epitopes/EP0059
T2 613-622 GlycoEpitope denotes anti-GD1b http://www.glycoepitope.jp/epitopes/AN0403
T3 618-622 GlycoEpitope denotes GD1b http://www.glycoepitope.jp/epitopes/EP0059

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T6 22-34 Phenotype denotes autoimmunity http://purl.obolibrary.org/obo/HP_0002960
T7 206-214 Phenotype denotes myositis http://purl.obolibrary.org/obo/HP_0100614
T8 298-305 Phenotype denotes Anosmia http://purl.obolibrary.org/obo/HP_0000458
T9 307-314 Phenotype denotes ageusia http://purl.obolibrary.org/obo/HP_0041051
T10 347-362 Phenotype denotes lymphocytopenia http://purl.obolibrary.org/obo/HP_0001888
T11 657-667 Phenotype denotes neuropathy http://purl.obolibrary.org/obo/HP_0009830