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PMC:7309518 / 181-1261 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T1 359-367 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T2 373-378 Body_part denotes nerve http://purl.org/sig/ont/fma/fma65132
T3 379-390 Body_part denotes glycolipids http://purl.org/sig/ont/fma/fma82780
T4 960-971 Body_part denotes ganglioside http://purl.org/sig/ont/fma/fma82816
T5 1053-1060 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 373-378 Body_part denotes nerve http://purl.obolibrary.org/obo/UBERON_0001021

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T7 10-13 Disease denotes GBS http://purl.obolibrary.org/obo/MONDO_0016218
T8 46-64 Disease denotes autoimmune disease http://purl.obolibrary.org/obo/MONDO_0007179
T9 99-107 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T10 216-219 Disease denotes GBS http://purl.obolibrary.org/obo/MONDO_0016218
T11 238-246 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T12 410-418 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T13 429-460 Disease denotes autoimmune necrotizing myositis http://purl.obolibrary.org/obo/MONDO_0016098
T14 452-460 Disease denotes myositis http://purl.obolibrary.org/obo/MONDO_0008054|http://purl.obolibrary.org/obo/MONDO_0021167
T16 462-465 Disease denotes NAM http://purl.obolibrary.org/obo/MONDO_0009722|http://purl.obolibrary.org/obo/MONDO_0016098
T18 698-701 Disease denotes GBS http://purl.obolibrary.org/obo/MONDO_0016218
T19 703-720 Disease denotes encephalomyelitis http://purl.obolibrary.org/obo/MONDO_0005156
T20 724-732 Disease denotes myositis http://purl.obolibrary.org/obo/MONDO_0008054|http://purl.obolibrary.org/obo/MONDO_0021167
T22 806-814 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T23 816-823 Disease denotes Anosmia http://purl.obolibrary.org/obo/MONDO_0010528
T24 840-860 Disease denotes cranial neuropathies http://purl.obolibrary.org/obo/MONDO_0003569
T25 865-880 Disease denotes lymphocytopenia http://purl.obolibrary.org/obo/MONDO_0003783
T26 936-958 Disease denotes Miller-Fisher Syndrome http://purl.obolibrary.org/obo/MONDO_0005851
T27 1038-1046 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T2 373-378 http://purl.obolibrary.org/obo/UBERON_0001021 denotes nerve

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T1 359-367 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T2 379-390 Chemical denotes glycolipids http://purl.obolibrary.org/obo/CHEBI_33563
T3 960-971 Chemical denotes ganglioside http://purl.obolibrary.org/obo/CHEBI_28892
T4 991-995 Chemical denotes GD1b http://purl.obolibrary.org/obo/CHEBI_28175
T5 1053-1060 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
8 46-64 Disease denotes autoimmune disease MESH:D001327
9 99-107 Disease denotes COVID-19 MESH:C000657245
15 238-246 Disease denotes COVID-19 MESH:C000657245
16 347-352 Disease denotes COVID MESH:C000657245
17 410-418 Disease denotes COVID-19 MESH:C000657245
18 429-460 Disease denotes autoimmune necrotizing myositis MESH:D020721
19 471-487 Disease denotes encephalopathies MESH:D001927
50 642-649 Species denotes patient Tax:9606
51 889-894 Species denotes flags Tax:34205
54 960-971 Chemical denotes ganglioside MESH:D005732
61 669-692 Disease denotes acute paralytic disease MESH:D000208
62 703-720 Disease denotes encephalomyelitis MESH:D004679
63 724-732 Disease denotes myositis MESH:D009220
64 806-814 Disease denotes COVID-19 MESH:C000657245
65 825-832 Disease denotes ageusia MESH:D000370
66 840-860 Disease denotes cranial neuropathies MESH:D003389
67 865-880 Disease denotes lymphocytopenia MESH:D008231
68 936-958 Disease denotes Miller-Fisher Syndrome MESH:D019846
69 1038-1046 Disease denotes COVID-19 MESH:C000657245

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T7 201-208 Sentence denotes Methods
T8 209-391 Sentence denotes Eleven GBS cases in four key COVID-19 hotspots are discussed regarding presenting symptoms, response to therapies and cross-reactivity of COVID spike proteins with nerve glycolipids.
T9 392-581 Sentence denotes Emerging cases of COVID-19–triggered autoimmune necrotizing myositis (NAM) and encephalopathies are also reviewed in the context of viral invasion, autoimmunity and ongoing immunotherapies.
T10 583-590 Sentence denotes Results
T11 591-815 Sentence denotes Collective data indicate that in this pandemic any patient presenting with an acute paralytic disease-like GBS, encephalomyelitis or myositis-even without systemic symptoms, may represent the first manifestation of COVID-19.
T12 816-932 Sentence denotes Anosmia, ageusia, other cranial neuropathies and lymphocytopenia are red flags enhancing early diagnostic suspicion.

LitCovid-PD-GlycoEpitope

Id Subject Object Predicate Lexical cue glyco_epitope_db_id
T1 991-995 GlycoEpitope denotes GD1b http://www.glycoepitope.jp/epitopes/EP0059

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T2 46-64 Phenotype denotes autoimmune disease http://purl.obolibrary.org/obo/HP_0002960
T3 118-132 Phenotype denotes autoimmunities http://purl.obolibrary.org/obo/HP_0002960
T4 452-460 Phenotype denotes myositis http://purl.obolibrary.org/obo/HP_0100614
T5 471-487 Phenotype denotes encephalopathies http://purl.obolibrary.org/obo/HP_0001298
T6 540-552 Phenotype denotes autoimmunity http://purl.obolibrary.org/obo/HP_0002960
T7 724-732 Phenotype denotes myositis http://purl.obolibrary.org/obo/HP_0100614
T8 816-823 Phenotype denotes Anosmia http://purl.obolibrary.org/obo/HP_0000458
T9 825-832 Phenotype denotes ageusia http://purl.obolibrary.org/obo/HP_0041051
T10 865-880 Phenotype denotes lymphocytopenia http://purl.obolibrary.org/obo/HP_0001888