PMC:7307149 / 8283-8596
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T52 | 105-113 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
| T53 | 239-249 | Body_part | denotes | amino acid | http://purl.org/sig/ont/fma/fma82739 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T82 | 122-124 | http://purl.obolibrary.org/obo/CLO_0001302 | denotes | 34 |
| T83 | 184-189 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | human |
| T84 | 219-221 | http://purl.obolibrary.org/obo/CLO_0001382 | denotes | 48 |
| T85 | 280-282 | http://purl.obolibrary.org/obo/CLO_0050050 | denotes | S1 |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T24 | 105-113 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T25 | 134-139 | Chemical | denotes | alpha | http://purl.obolibrary.org/obo/CHEBI_30216 |
| T26 | 239-249 | Chemical | denotes | amino acid | http://purl.obolibrary.org/obo/CHEBI_33709 |
| T27 | 239-244 | Chemical | denotes | amino | http://purl.obolibrary.org/obo/CHEBI_46882 |
| T28 | 245-249 | Chemical | denotes | acid | http://purl.obolibrary.org/obo/CHEBI_37527 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 179 | 82-88 | Gene | denotes | ORF1ab | Gene:43740578 |
| 184 | 145-162 | Species | denotes | betacoronaviruses | Tax:694002 |
| 185 | 184-189 | Species | denotes | human | Tax:9606 |
| 186 | 190-203 | Species | denotes | coronaviruses | Tax:11118 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T53 | 0-313 | Sentence | denotes | After aligning reference proteome sequence data for 5 essential viral components (ORF1ab, S, E, M, and N proteins) across 34 distinct alpha- and betacoronaviruses, including all known human coronaviruses, we identified 48 highly conserved amino acid sequence spans (see Data File S1 in the supplemental material). |