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PMC:7306567 / 8943-9909 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T6 114-124 Body_part denotes epithelium http://purl.org/sig/ont/fma/fma9639
T7 181-185 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T8 471-475 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T9 476-482 Body_part denotes tissue http://purl.org/sig/ont/fma/fma9637
T10 574-578 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T11 645-649 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T3 114-124 Body_part denotes epithelium http://purl.obolibrary.org/obo/UBERON_0000483
T4 181-185 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T5 423-430 Body_part denotes bronchi http://purl.obolibrary.org/obo/UBERON_0002185
T6 471-475 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T7 476-482 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T8 574-578 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T9 645-649 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
89 782-793 Chemical denotes oseltamivir MESH:D053139
90 248-267 Disease denotes Aspergillus disease MESH:D001228
91 645-656 Disease denotes lung damage MESH:D008171

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T52 128-137 Disease denotes influenza http://purl.obolibrary.org/obo/MONDO_0005812
T53 193-202 Disease denotes influenza http://purl.obolibrary.org/obo/MONDO_0005812

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T55 114-124 http://purl.obolibrary.org/obo/UBERON_0000483 denotes epithelium
T56 181-185 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T57 181-185 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T58 391-396 http://purl.obolibrary.org/obo/UBERON_0000033 denotes heads
T59 391-396 http://www.ebi.ac.uk/efo/EFO_0000964 denotes heads
T60 471-475 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T61 471-475 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T62 516-517 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T63 574-578 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T64 574-578 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T65 645-649 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T66 645-649 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T41 725-740 Chemical denotes corticosteroids http://purl.obolibrary.org/obo/CHEBI_50858
T42 748-772 Chemical denotes neuraminidase inhibitors http://purl.obolibrary.org/obo/CHEBI_52425
T43 762-772 Chemical denotes inhibitors http://purl.obolibrary.org/obo/CHEBI_35222
T44 782-793 Chemical denotes oseltamivir http://purl.obolibrary.org/obo/CHEBI_7798
T45 902-912 Chemical denotes antifungal http://purl.obolibrary.org/obo/CHEBI_35718

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T5 36-48 http://purl.obolibrary.org/obo/GO_0009405 denotes pathogenesis
T6 436-451 http://purl.obolibrary.org/obo/GO_0044409 denotes invasive growth
T7 436-451 http://purl.obolibrary.org/obo/GO_0036267 denotes invasive growth
T8 445-451 http://purl.obolibrary.org/obo/GO_0040007 denotes growth
T9 484-495 http://purl.obolibrary.org/obo/GO_0043934 denotes Sporulation
T10 484-495 http://purl.obolibrary.org/obo/GO_0030437 denotes Sporulation

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T59 0-322 Sentence denotes In pending studies that explore the pathogenesis of IAPA and host immune defects, it is likely that damage to the epithelium by influenza and defective fungal host responses in the lung due to influenza and/or inflammatory conditions predispose to Aspergillus disease, similar as what is seen in bacterial superinfections.
T60 323-483 Sentence denotes Furthermore, autopsy studies have shown the presence of sporulating heads of Aspergillus inside the bronchi with invasive growth occurring into the lung tissue.
T61 484-657 Sentence denotes Sporulation could contribute to a high fungal burden and spread of the disease within the lung, thus contributing to the rapid disease progression and extensive lung damage.
T62 658-802 Sentence denotes Other factors that have been implicated in IAPA include the use of corticosteroids and of neuraminidase inhibitors, such as oseltamivir [7, 30].
T63 803-966 Sentence denotes Ultimately, these insights may aid in identifying patients at risk of IAPA and to design effective antifungal and adjunctive immunomodulatory treatment strategies.

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T54 66-72 UBERON:0002405 denotes immune
T55 114-124 UBERON:0000483 denotes epithelium
T56 152-158 NCBITaxon:4751 denotes fungal
T57 181-185 UBERON:0002048 denotes lung
T58 296-305 NCBITaxon:2 denotes bacterial
T59 391-396 UBERON:0000033 denotes heads
T60 423-430 UBERON:0002185 denotes bronchi
T61 471-475 UBERON:0002048 denotes lung
T62 476-482 UBERON:0000479 denotes tissue
T63 484-495 GO:0030435 denotes Sporulation
T64 523-529 NCBITaxon:4751 denotes fungal
T65 574-578 UBERON:0002048 denotes lung
T66 645-649 UBERON:0002048 denotes lung
T67 725-740 CHEBI:50858;CHEBI:50858 denotes corticosteroids
T68 762-772 CHEBI:35222;CHEBI:35222 denotes inhibitors
T69 782-793 CHEBI:7798;CHEBI:7798 denotes oseltamivir
T36119 66-72 UBERON:0002405 denotes immune
T76747 114-124 UBERON:0000483 denotes epithelium
T77643 152-158 NCBITaxon:4751 denotes fungal
T24189 181-185 UBERON:0002048 denotes lung
T78724 296-305 NCBITaxon:2 denotes bacterial
T53463 391-396 UBERON:0000033 denotes heads
T89433 423-430 UBERON:0002185 denotes bronchi
T96055 471-475 UBERON:0002048 denotes lung
T50524 476-482 UBERON:0000479 denotes tissue
T48743 484-495 GO:0030435 denotes Sporulation
T26080 523-529 NCBITaxon:4751 denotes fungal
T64776 574-578 UBERON:0002048 denotes lung
T81352 645-649 UBERON:0002048 denotes lung
T78005 725-740 CHEBI:50858;CHEBI:50858 denotes corticosteroids
T22610 762-772 CHEBI:35222;CHEBI:35222 denotes inhibitors
T97282 782-793 CHEBI:7798;CHEBI:7798 denotes oseltamivir

2_test

Id Subject Object Predicate Lexical cue
32572532-22895826-47963418 795-796 22895826 denotes 7
T47034 795-796 22895826 denotes 7