PMC:7306567 / 26155-27219
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 260 | 503-505 | Chemical | denotes | GM | MESH:C012990 |
| 261 | 961-963 | Chemical | denotes | GM | MESH:C012990 |
| 262 | 103-112 | Disease | denotes | infection | MESH:D007239 |
| 263 | 345-383 | Disease | denotes | invasive Aspergillus tracheobronchitis | MESH:D001228 |
| 264 | 786-812 | Disease | denotes | invasive tracheobronchitis | MESH:D009361 |
| 265 | 937-946 | Disease | denotes | infection | MESH:D007239 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T104 | 45-54 | Disease | denotes | influenza | http://purl.obolibrary.org/obo/MONDO_0005812 |
| T105 | 103-112 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T106 | 366-383 | Disease | denotes | tracheobronchitis | http://purl.obolibrary.org/obo/MONDO_0021925 |
| T107 | 585-594 | Disease | denotes | influenza | http://purl.obolibrary.org/obo/MONDO_0005812 |
| T108 | 683-692 | Disease | denotes | influenza | http://purl.obolibrary.org/obo/MONDO_0005812 |
| T109 | 727-736 | Disease | denotes | influenza | http://purl.obolibrary.org/obo/MONDO_0005812 |
| T110 | 795-812 | Disease | denotes | tracheobronchitis | http://purl.obolibrary.org/obo/MONDO_0021925 |
| T111 | 937-946 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T178 | 5-8 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
| T179 | 20-21 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T180 | 446-453 | http://purl.obolibrary.org/obo/UBERON_0001005 | denotes | airways |
| T181 | 462-463 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T182 | 561-566 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | tests |
| T183 | 737-742 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T183 | 198-201 | Chemical | denotes | IPA | http://purl.obolibrary.org/obo/CHEBI_17824|http://purl.obolibrary.org/obo/CHEBI_30802 |
| T185 | 499-502 | Chemical | denotes | BAL | http://purl.obolibrary.org/obo/CHEBI_64198 |
| T186 | 503-505 | Chemical | denotes | GM | http://purl.obolibrary.org/obo/CHEBI_74120|http://purl.obolibrary.org/obo/CHEBI_27680 |
| T188 | 961-963 | Chemical | denotes | GM | http://purl.obolibrary.org/obo/CHEBI_74120|http://purl.obolibrary.org/obo/CHEBI_27680 |
| T190 | 999-1002 | Chemical | denotes | BAL | http://purl.obolibrary.org/obo/CHEBI_64198 |
LitCovid-PD-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue | glyco_epitope_db_id |
|---|---|---|---|---|---|
| T26 | 503-505 | GlycoEpitope | denotes | GM | http://www.glycoepitope.jp/epitopes/EP0510 |
| T27 | 961-963 | GlycoEpitope | denotes | GM | http://www.glycoepitope.jp/epitopes/EP0510 |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T35 | 198-201 | Phenotype | denotes | IPA | http://purl.obolibrary.org/obo/HP_0020103 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T195 | 0-202 | Sentence | denotes | IAPA has emerged as a severe complication of influenza, especially in ICU patients, and this secondary infection may occur in any patient, including those considered to be at low risk of developing IPA. |
| T196 | 203-301 | Sentence | denotes | The global epidemiology of IAPA may be variable, which might be partly due to underdiagnosis [24]. |
| T197 | 302-474 | Sentence | denotes | The clinical presentation of IAPA includes invasive Aspergillus tracheobronchitis, which requires bronchoscopic visualization of plaques in the airways to make a diagnosis. |
| T198 | 475-612 | Sentence | denotes | Aspergillus culture and BAL GM are positive in > 80% of IAPA cases, and ordering such tests is recommended in influenza cases in the ICU. |
| T199 | 613-743 | Sentence | denotes | The proposed case definition relies on an entry criterion based on an influenza-like illness and the detection of influenza virus. |
| T200 | 744-947 | Sentence | denotes | The case definition distinguishes between invasive tracheobronchitis and other pulmonary forms of IAPA, with demonstration of invasive fungal hyphae with positive mycology qualifying as proven infection. |
| T201 | 948-1064 | Sentence | denotes | Detection of GM or positive Aspergillus culture in BAL is the main mycological criteria in probable case definition. |
LitCovid-PMC-OGER-BB
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T240 | 354-365 | NCBITaxon:5052 | denotes | Aspergillus |
| T241 | 446-453 | UBERON:0001005 | denotes | airways |
| T242 | 499-502 | SO:0000153 | denotes | BAL |
| T243 | 727-736 | NCBITaxon:7719 | denotes | influenza |
| T244 | 737-742 | NCBITaxon:10239 | denotes | virus |
| T245 | 795-812 | UBERON:0007196 | denotes | tracheobronchitis |
| T246 | 823-832 | UBERON:0002048 | denotes | pulmonary |
| T247 | 879-885 | NCBITaxon:4751 | denotes | fungal |
| T248 | 976-987 | NCBITaxon:5052 | denotes | Aspergillus |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32572532-32160910-47963452 | 297-299 | 32160910 | denotes | 24 |
| T1408 | 297-299 | 32160910 | denotes | 24 |