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LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T44 2813-2822 NCBITaxon:40674 denotes mammalian
T1 19-32 GO:0016020 denotes Transmembrane
T2 42-48 PR:000029554 denotes IFITM3
T3 79-89 SP_7 denotes SARS-CoV-2
T4 99-103 CL:0000082;UBERON:0000115 denotes Lung
T5 104-114 UBERON:0000115;CL:0000066 denotes Epithelial
T6 115-120 CL:0000066 denotes Cells
T7 154-162 SP_7 denotes COVID-19
T8 222-227 CHEBI:23888;CHEBI:23888 denotes drugs
T9 298-308 SP_7 denotes SARS-CoV-2
T10 621-629 SP_10 denotes SARS-CoV
T11 639-645 NCBITaxon:9606 denotes humans
T12 650-657 NCBITaxon:40674 denotes mammals
T13 696-705 GO:0010467 denotes expressed
T14 706-711 SO:0000704 denotes genes
T15 730-740 SP_7 denotes SARS-CoV-2
T16 750-760 UBERON:0000483 denotes epithelial
T17 847-852 SO:0000704 denotes genes
T18 910-915 CHEBI:23888;CHEBI:23888 denotes drugs
T19 947-953 PR:000029554 denotes IFITM3
T20 978-982 SO:0000704 denotes gene
T21 988-1001 CHEBI:39867;CHEBI:39867 denotes valproic acid
T22 1032-1042 GO:0010467 denotes expression
T23 1253-1262 CHEBI:36357;CHEBI:36357 denotes molecules
T24 1358-1366 SP_7 denotes COVID-19
T25 1382-1395 NCBITaxon:11118 denotes Coronaviruses
T26 1418-1425 NCBITaxon:10239 denotes viruses
T27 1562-1575 NCBITaxon:11118 denotes coronaviruses
T28 1584-1592 SP_10 denotes SARS-CoV
T29 1605-1613 SP_9 denotes MERS-CoV
T30 1639-1647 SP_7 denotes COVID-19
T31 1667-1677 SP_7 denotes SARS-CoV-2
T32 1769-1777 SP_7 denotes COVID-19
T33 1890-1898 SP_7 denotes COVID-19
T34 2234-2239 CHEBI:23888;CHEBI:23888 denotes drugs
T35 2248-2259 CHEBI:3638;CHEBI:3638;DG_10 denotes chloroquine
T36 2275-2293 CHEBI:5801;CHEBI:5801;DG_20 denotes hydroxychloroquine
T37 2305-2314 CHEBI:22587;CHEBI:22587 denotes antiviral
T38 2315-2321 CHEBI:67079;CHEBI:67079 denotes agents
T39 2470-2478 SP_7 denotes COVID-19
T40 2660-2665 CHEBI:23888;CHEBI:23888 denotes drugs
T41 2713-2723 SP_7 denotes SARS-CoV-2
T42 2783-2791 SP_10 denotes SARS-CoV
T43 2801-2807 NCBITaxon:9606 denotes humans
T45 2913-2922 GO:0010467 denotes expressed
T46 2923-2928 SO:0000704 denotes genes
T47 2968-2978 SP_7 denotes SARS-CoV-2
T48 2988-2998 UBERON:0000483;CL:0000066 denotes epithelial
T49 2999-3004 CL:0000066 denotes cells
T50 3087-3092 SO:0000704 denotes genes
T51 3165-3170 CHEBI:23888;CHEBI:23888 denotes drugs
T52 3255-3260 CHEBI:23888;CHEBI:23888 denotes drugs
T53 3364-3370 PR:000029554 denotes IFITM3
T54 3395-3399 SO:0000704 denotes gene
T55 3418-3431 CHEBI:17418;CHEBI:17418 denotes valproic acid
T56 3441-3447 PR:000029554 denotes IFITM3
T57 3453-3463 GO:0010467 denotes expression
T58 3572-3576 SO:0000704;GO:0010467 denotes Gene
T59 3577-3587 GO:0010467 denotes Expression
T60 3655-3659 SO:0000704;GO:0010467 denotes gene
T61 3660-3670 GO:0010467 denotes expression
T62 3695-3703 SP_10 denotes SARS-COV
T63 3706-3711 NCBITaxon:10239 denotes virus
T64 3968-3973 SO:0000704 denotes genes
T65 4048-4057 GO:0010467 denotes expressed
T66 4127-4132 SO:0000704 denotes genes
T67 4206-4215 GO:0010467 denotes expressed
T68 4216-4221 SO:0000704 denotes genes
T69 4349-4354 SO:0000704 denotes genes
T70 4402-4410 SP_10 denotes SARS-COV
T71 4470-4475 SO:0000704 denotes genes
T72 4587-4592 SO:0000704;GO:0010467 denotes genes
T73 4593-4603 GO:0010467 denotes expression
T74 4686-4691 SP_6;NCBITaxon:9606 denotes human
T75 4692-4707 UBERON:0000115 denotes lung epithelium
T76 4745-4755 SP_7 denotes SARS-CoV-2
T77 4825-4835 SP_7 denotes SARS-CoV-2
T78 4954-4958 SO:0000704;GO:0010467 denotes Gene
T79 4959-4969 GO:0010467 denotes Expression
T80 7326-7331 SO:0000704 denotes genes
T81 7352-7361 GO:0010467 denotes expressed
T82 7362-7367 SO:0000704 denotes genes
T83 7401-7408 NCBITaxon:10239 denotes virally
T84 7457-7462 SO:0000704 denotes genes
T85 7551-7559 SP_10 denotes SARS-COV
T86 7577-7582 UBERON:0000170 denotes lungs
T87 7623-7628 SO:0000704 denotes genes
T88 7661-7666 SO:0000704 denotes Genes
T89 7762-7770 SP_10 denotes SARS-CoV
T90 7788-7792 UBERON:0002048 denotes lung
T91 9702-9709 NCBITaxon:species denotes Species
T92 9731-9739 SP_10 denotes SARS-CoV
T93 9778-9786 SP_10 denotes SARS-CoV
T94 9796-9800 UBERON:0002048 denotes lung
T95 9801-9807 UBERON:0000479 denotes tissue
T96 9935-9940 SP_6;NCBITaxon:9606 denotes Human
T97 9941-9951 UBERON:0000483;CL:0000066 denotes epithelial
T98 9952-9957 CL:0000066 denotes cells
T99 10023-10027 NCBITaxon:10088 denotes mice
T100 10126-10134 NCBITaxon:9539 denotes macaques
T101 10176-10184 SP_7 denotes COVID-19
T102 10194-10204 UBERON:0000483;CL:0000066 denotes epithelial
T103 10205-10210 CL:0000066 denotes cells
T104 10289-10296 NCBITaxon:species denotes species
T105 10323-10333 UBERON:0000483;CL:0000066 denotes Epithelial
T106 10334-10339 CL:0000066 denotes cells
T107 10354-10364 SP_7 denotes SARS-CoV-2
T108 10385-10389 PR:000011576 denotes OAS3
T109 10391-10395 PR:000017471 denotes XAF1
T110 10397-10402 PR:000008907 denotes IFI44
T111 10409-10413 PR:000002049 denotes IRF7
T112 10415-10420 PR:000002087 denotes STAT1
T113 10422-10427 PR:000029552 denotes IFIT3
T114 10433-10438 PR:000029550 denotes IFIT1
T115 10445-10450 SP_6;NCBITaxon:9606 denotes Human
T116 10451-10455 UBERON:0002048;CL:0000082 denotes Lung
T117 10456-10461 CL:0000082 denotes Cells
T118 10463-10467 NCBITaxon:10088 denotes Mice
T119 10473-10483 NCBITaxon:6073 denotes Cynomolgus
T120 10484-10488 NCBITaxon:9539 denotes maca
T121 10518-10525 NCBITaxon:40674 denotes mammals
T122 10530-10535 SP_6;NCBITaxon:9606 denotes human
T123 10556-10564 SP_10 denotes SARS-CoV
T124 10565-10570 NCBITaxon:10239 denotes virus
T125 10696-10704 SP_10 denotes SARS-CoV
T126 11553-11558 SO:0000704 denotes Genes
T127 11579-11585 UBERON:0002405 denotes Immune
T128 11636-11641 SO:0000704 denotes genes
T129 11669-11675 GO:0045087 denotes innate
T130 11676-11682 GO:0045087;UBERON:0002405 denotes immune
T131 11683-11692 GO:0045087 denotes responses
T132 11705-11712 NCBITaxon:10239 denotes viruses
T133 11732-11741 GO:0005829 denotes cytosolic
T134 11742-11753 GO:0042770 denotes DNA-sensing
T135 11763-11781 GO:0007179 denotes Toll-like receptor
T136 11866-11871 NCBITaxon:10239 denotes viral
T137 11896-11897 GO:0045087 denotes I
T138 11898-11926 GO:0060337 denotes interferon signaling pathway
T139 11928-11935 GO:0006952 denotes defense
T140 11952-11957 NCBITaxon:10239 denotes virus
T141 12001-12006 SO:0000704 denotes genes
T142 12008-12021 GO:0032479 denotes regulation of
T143 12064-12080 PR:000024938 denotes interferon-alpha
T144 12086-12096 GO:0050688 denotes regulation
T145 12097-12099 GO:0045595 denotes of
T146 12100-12107 GO:0050688 denotes defense
T147 12120-12125 NCBITaxon:10239 denotes virus
T148 12166-12171 SO:0000704 denotes Genes
T149 12214-12228 UBERON:0002405 denotes immune systems
T150 12237-12247 GO:0060759 denotes regulation
T151 12305-12311 UBERON:0002405;GO:0050777 denotes immune
T152 12312-12320 GO:0050777 denotes response
T153 12322-12329 CL:0000763 denotes myeloid
T154 12330-12334 CL:0000763;GO:0002262 denotes cell
T155 12335-12346 GO:0002262 denotes homeostasis
T156 12361-12371 GO:0065007 denotes regulation
T157 12385-12393 NCBITaxon:1 denotes organism
T158 12584-12589 SO:0000704 denotes Genes
T159 15083-15089 PR:000029554 denotes IFITM3
T160 15091-15095 PR:000011575 denotes OAS2
T161 15101-15104 PR:000010788 denotes MX1
T162 15140-15150 SP_7 denotes SARS-CoV-2
T163 15160-15170 UBERON:0000483;CL:0000066 denotes Epithelial
T164 15171-15176 CL:0000066 denotes Cells
T165 15192-15197 SO:0000704;GO:0010467 denotes genes
T166 15198-15208 GO:0010467 denotes expression
T167 15231-15236 SP_6;NCBITaxon:9606 denotes human
T168 15237-15257 UBERON:0002031 denotes bronchial epithelium
T169 15272-15282 SP_7 denotes SARS-CoV-2
T170 15341-15347 PR:000029554 denotes IFITM3
T171 15408-15413 SO:0000704 denotes genes
T172 15414-15418 PR:000011575 denotes OAS2
T173 15423-15426 PR:000010788 denotes MX1
T174 15598-15604 PR:000029554 denotes IFITM3
T175 15640-15649 GO:0010467 denotes expressed
T176 15650-15655 SO:0000704 denotes genes
T221 18591-18595 UBERON:0002048 denotes lung
T222 18658-18676 CL:0009002 denotes inflammatory cells
T177 15689-15694 SO:0000704 denotes genes
T178 15760-15765 NCBITaxon:10239 denotes virus
T179 15820-15824 SO:0000704;GO:0010467 denotes Gene
T180 15825-15835 GO:0010467 denotes expression
T181 15855-15860 SO:0000704 denotes genes
T182 15872-15882 UBERON:0000483 denotes epithelium
T183 15897-15907 SP_7 denotes SARS-CoV-2
T184 15987-15995 CHEBI:17418;CHEBI:17418 denotes Valproic
T185 16020-16026 PR:000029554 denotes IFITM3
T186 16032-16042 GO:0010467 denotes Expression
T187 16135-16140 CHEBI:23888;CHEBI:23888 denotes drugs
T188 16178-16188 GO:0010467 denotes expression
T189 16192-16198 PR:000029554 denotes IFITM3
T190 16253-16266 CHEBI:39867;CHEBI:39867 denotes valproic acid
T191 16298-16303 CHEBI:8502;CHEBI:8502 denotes tert-
T192 16303-16321 CHEBI:28714;CHEBI:28714 denotes butylhydroperoxide
T193 16347-16353 PR:000029554 denotes IFITM3
T194 16354-16364 GO:0010467 denotes expression
T195 16371-16385 CHEBI:32509;CHEBI:32509 denotes pirinixic acid
T196 16387-16400 CHEBI:15344;CHEBI:15344 denotes acetaminophen
T197 16414-16423 CHEBI:23965;CHEBI:23965 denotes estradiol
T198 16442-16452 GO:0010467 denotes expression
T199 16519-16525 PR:000029554 denotes IFITM3
T200 16531-16541 GO:0010467 denotes expression
T201 17602-17615 CHEBI:39867;CHEBI:39867 denotes valproic acid
T202 17631-17637 PR:000029554 denotes IFITM3
T203 17643-17653 GO:0010467 denotes expression
T204 17657-17663 UBERON:0002405;CL:0000738 denotes immune
T205 17664-17669 CL:0000738 denotes cells
T206 17677-17682 UBERON:0000178 denotes blood
T207 17847-17860 CHEBI:39867;CHEBI:39867 denotes valproic acid
T208 17879-17894 GO:0010628 denotes upregulation of
T209 17918-17924 PR:000029554 denotes IFITM3
T210 18074-18078 SO:0000704;GO:0010467 denotes gene
T211 18079-18089 GO:0010467 denotes expression
T212 18093-18099 PR:000029554 denotes IFITM3
T213 18107-18112 UBERON:0000178 denotes blood
T214 18138-18151 CHEBI:39867;CHEBI:39867 denotes valproic acid
T215 18311-18316 NCBITaxon:10239 denotes viral
T216 18343-18353 SP_7 denotes SARS-CoV-2
T217 18366-18379 UBERON:0002405 denotes immune system
T218 18448-18456 CHEBI:35224;CHEBI:35224 denotes effector
T219 18493-18497 NCBITaxon:10088 denotes mice
T220 18512-18520 SP_10 denotes SARS-CoV
T223 18692-18696 UBERON:0002048 denotes lung
T224 18775-18782 NCBITaxon:10239 denotes virally
T225 18791-18796 PR:000001471 denotes IL-10
T226 18825-18834 NCBITaxon:2 denotes bacterial
T227 18869-18873 PR:000001136 denotes IL1β
T228 18925-18929 UBERON:0002048 denotes lung
T229 18961-18971 SP_7 denotes SARS-CoV-2
T230 19050-19055 NCBITaxon:10239 denotes viral
T231 19186-19194 SP_10 denotes SARS-CoV
T232 19214-19224 SP_7 denotes SARS-CoV-2
T233 19261-19265 SO:0000704 denotes gene
T234 19314-19320 PR:000029554 denotes IFITM3
T235 19322-19328 PR:000029554 denotes IFITM3
T236 19367-19376 GO:0005768 denotes endosomes
T237 19381-19390 GO:0005764 denotes lysosomes
T238 19419-19428 NCBITaxon:40674 denotes mammalian
T239 19460-19464 SO:0000704 denotes gene
T240 19499-19512 GO:0016020 denotes transmembrane
T241 19554-19560 UBERON:0002405 denotes immune
T242 19575-19580 NCBITaxon:10239 denotes virus
T243 19600-19608 GO:0065007 denotes regulate
T244 19632-19637 NCBITaxon:10239 denotes virus
T245 19642-19651 GO:0006897;GO:0030139 denotes endocytic
T246 19652-19660 GO:0030139 denotes vesicles
T247 19682-19691 GO:0005764 denotes lysosomes
T248 19702-19708 PR:000029554 denotes IFITM3
T249 19727-19735 GO:0016020 denotes membrane
T250 19770-19775 GO:0005886;NCBITaxon:10239 denotes virus
T251 19776-19784 GO:0036338;GO:0061025 denotes membrane
T252 19785-19791 GO:0061025 denotes fusion
T253 19849-19854 NCBITaxon:10239 denotes viral
T254 19874-19883 GO:0005737 denotes cytoplasm
T255 19891-19899 GO:0065007 denotes controls
T256 19900-19905 NCBITaxon:10239 denotes viral
T257 19926-19935 NCBITaxon:7719 denotes influenza
T258 19951-19956 SP_6;NCBITaxon:9606 denotes human
T259 19957-19963 UBERON:0001005 denotes airway
T260 19964-19974 UBERON:0000483;CL:0002368 denotes epithelial
T261 19975-19980 CL:0002368 denotes cells
T262 19982-19988 PR:000029554 denotes IFITM3
T263 20014-20019 NCBITaxon:10239 denotes virus
T264 20031-20040 GO:0005768 denotes endosomes
T265 20045-20054 GO:0005764 denotes lysosomes
T266 20130-20135 NCBITaxon:10239;GO:0035376 denotes viral
T267 20136-20141 GO:0035376 denotes entry
T268 20153-20162 CL:0000233 denotes platelets
T269 20167-20181 CL:0000556 denotes megakaryocytes
T270 20218-20224 PR:000029554 denotes IFITM3
T271 20236-20241 NCBITaxon:10239 denotes viral
T272 20291-20301 UBERON:0000483;CL:0000066 denotes epithelial
T273 20302-20306 CL:0000066 denotes cell
T274 20320-20330 CL:0000738 denotes leukocytes
T275 20334-20338 UBERON:0002048 denotes lung
T276 20355-20362 UBERON:0001005 denotes airways
T277 20383-20390 GO:0010467 denotes express
T278 20391-20397 PR:000029554 denotes IFITM3
T279 20412-20417 NCBITaxon:10239 denotes viral
T280 20458-20463 NCBITaxon:10239 denotes viral
T281 20475-20482 NCBITaxon:10239 denotes viruses
T282 20504-20510 PR:000029554 denotes IFITM3
T283 20511-20521 GO:0010467 denotes expression
T284 20528-20534 PR:000029554 denotes IFITM3
T285 20569-20576 CL:0000084 denotes T cells
T286 20580-20587 UBERON:0001005 denotes airways
T287 20599-20606 UBERON:0000912;CL:0000738 denotes mucosal
T288 20607-20613 CL:0000738;UBERON:0002405 denotes immune
T289 20614-20618 CL:0000738 denotes cell
T290 20637-20641 UBERON:0002048 denotes Lung
T291 20646-20657 CL:0000080 denotes circulating
T292 20658-20664 UBERON:0002405;CL:0000738 denotes immune
T293 20665-20670 CL:0000738 denotes cells
T294 20688-20695 GO:0010467 denotes express
T295 20701-20707 PR:000029554 denotes IFITM3
T296 20719-20726 UBERON:0000479 denotes tissues
T297 20765-20773 SP_7 denotes COVID-19
T298 20834-20840 PR:000029554 denotes IFITM3
T299 20853-20856 SO:0000694 denotes SNP
T300 20939-20943 SO:0000694 denotes SNPs
T301 20947-20953 PR:000029554 denotes IFITM3
T302 21034-21042 SP_7 denotes COVID-19
T303 21049-21055 PR:000029554 denotes IFITM3
T304 21129-21138 NCBITaxon:7719 denotes influenza
T305 21139-21144 NCBITaxon:10239 denotes virus
T306 21161-21171 GO:0010467 denotes Expressing
T307 21176-21180 SO:0000704 denotes gene
T308 21237-21243 PR:000029554 denotes IFITM3
T309 21310-21315 SO:0001114 denotes helix
T310 21355-21360 NCBITaxon:10239 denotes viral
T311 21390-21397 NCBITaxon:10239 denotes viruses
T312 21403-21412 NCBITaxon:7719 denotes influenza
T313 21413-21414 NCBITaxon:8782 denotes A
T314 21415-21420 NCBITaxon:10239 denotes virus
T315 21425-21429 NCBITaxon:7955 denotes Zika
T316 21430-21435 NCBITaxon:10239 denotes virus
T317 21462-21471 GO:0065007 denotes regulates
T318 21476-21482 PR:000029554 denotes IFITM3
T319 21515-21522 NCBITaxon:10239 denotes viruses
T320 21590-21594 PR:000012249 denotes PALM
T321 21635-21645 CHEBI:35366;CHEBI:35366 denotes fatty acid
T322 21730-21736 SO:0000417 denotes domain
T323 21796-21802 PR:000029554 denotes IFITM3
T324 21871-21875 SP_2;NCBITaxon:6960 denotes bats
T325 21932-21937 NCBITaxon:10239 denotes viral
T326 21954-21960 PR:000029554 denotes IFITM3
T327 22080-22083 SP_2 denotes bat
T328 22096-22101 NCBITaxon:10239 denotes viral
T329 22160-22168 SP_7 denotes COVID-19
T330 22213-22219 PR:000029554 denotes IFITM3
T331 22223-22226 SO:0000694 denotes SNP
T332 22239-22243 UBERON:0002048;CL:0000082 denotes lung
T333 22244-22249 CL:0000082 denotes cells
T334 22264-22270 PR:000029554 denotes IFITM3
T335 22324-22329 SO:0001114 denotes helix
T336 22418-22424 PR:000029554 denotes IFITM3
T337 22437-22445 SP_7 denotes COVID-19
T338 22548-22561 CHEBI:17418;CHEBI:17418 denotes valproic acid
T339 22581-22591 GO:0010467 denotes expression
T340 22595-22601 PR:000029554 denotes IFITM3
T341 22636-22646 SP_7 denotes SARS-CoV-2
T342 22647-22652 SP_6;NCBITaxon:9606 denotes human
T343 22697-22710 CHEBI:39867;CHEBI:39867 denotes valproic acid
T344 22744-22748 CHEBI:23888;CHEBI:23888 denotes drug
T345 22753-22761 SP_7 denotes COVID-19
T346 22849-22862 CHEBI:39867;CHEBI:39867 denotes valproic acid
T347 22893-22898 PR:000000125 denotes nsP12
T348 22941-22954 CHEBI:39867;CHEBI:39867 denotes Valproic acid
T349 23023-23030 CHEBI:15358;CHEBI:15358;PR:000041244 denotes histone
T350 23068-23072 SO:0000704;GO:0010467 denotes gene
T351 23073-23083 GO:0010467 denotes expression
T352 23105-23118 CHEBI:39867;CHEBI:39867 denotes Valproic acid
T353 23178-23185 NCBITaxon:10239 denotes viruses
T354 23207-23224 GO:0005886 denotes cellular membrane
T355 23286-23299 CHEBI:39867;CHEBI:39867 denotes valproic acid
T356 23309-23313 CHEBI:23888;CHEBI:23888 denotes drug
T357 23427-23432 NCBITaxon:10239 denotes viral
T358 23497-23511 CHEBI:50905;CHEBI:50905 denotes teratogenicity
T359 23625-23635 CHEBI:74562;CHEBI:74562 denotes Valpromide
T360 23646-23658 CHEBI:17418;CHEBI:17418 denotes valnoctamide
T361 23732-23745 CHEBI:39867;CHEBI:39867 denotes Valproic Acid
T362 23757-23765 SP_7 denotes COVID-19
T363 23902-23915 CHEBI:39867;CHEBI:39867 denotes valproic acid
T364 23936-23944 SP_7 denotes COVID-19
T365 24405-24410 CHEBI:23888;CHEBI:23888 denotes drugs
T366 24506-24514 SP_7 denotes COVID-19
T367 24636-24641 CHEBI:23888;CHEBI:23888 denotes drugs
T33507 19-32 GO:0016020 denotes Transmembrane
T93160 42-48 PR:000029554 denotes IFITM3
T45961 79-89 SP_7 denotes SARS-CoV-2
T68059 99-103 CL:0000082;UBERON:0000115 denotes Lung
T53005 104-114 UBERON:0000115;CL:0000066 denotes Epithelial
T85358 115-120 CL:0000066 denotes Cells
T84786 154-162 SP_7 denotes COVID-19
T70521 222-227 CHEBI:23888;CHEBI:23888 denotes drugs
T59261 298-308 SP_7 denotes SARS-CoV-2
T76815 621-629 SP_10 denotes SARS-CoV
T5861 639-645 NCBITaxon:9606 denotes humans
T23549 650-657 NCBITaxon:40674 denotes mammals
T65050 696-705 GO:0010467 denotes expressed
T84555 706-711 SO:0000704 denotes genes
T23008 730-740 SP_7 denotes SARS-CoV-2
T20489 750-760 UBERON:0000483 denotes epithelial
T47109 847-852 SO:0000704 denotes genes
T54691 910-915 CHEBI:23888;CHEBI:23888 denotes drugs
T62840 947-953 PR:000029554 denotes IFITM3
T32079 978-982 SO:0000704 denotes gene
T83537 988-1001 CHEBI:39867;CHEBI:39867 denotes valproic acid
T74250 1032-1042 GO:0010467 denotes expression
T12736 1253-1262 CHEBI:36357;CHEBI:36357 denotes molecules
T7912 1358-1366 SP_7 denotes COVID-19
T32735 1382-1395 NCBITaxon:11118 denotes Coronaviruses
T75319 1418-1425 NCBITaxon:10239 denotes viruses
T24584 1562-1575 NCBITaxon:11118 denotes coronaviruses
T33896 1584-1592 SP_10 denotes SARS-CoV
T75930 1605-1613 SP_9 denotes MERS-CoV
T77983 1639-1647 SP_7 denotes COVID-19
T97755 1667-1677 SP_7 denotes SARS-CoV-2
T22460 1769-1777 SP_7 denotes COVID-19
T45567 1890-1898 SP_7 denotes COVID-19
T19498 2234-2239 CHEBI:23888;CHEBI:23888 denotes drugs
T55170 2248-2259 CHEBI:3638;CHEBI:3638;DG_10 denotes chloroquine
T4343 2275-2293 CHEBI:5801;CHEBI:5801;DG_20 denotes hydroxychloroquine
T14028 2305-2314 CHEBI:22587;CHEBI:22587 denotes antiviral
T70583 2315-2321 CHEBI:67079;CHEBI:67079 denotes agents
T33016 2470-2478 SP_7 denotes COVID-19
T49891 2660-2665 CHEBI:23888;CHEBI:23888 denotes drugs
T43076 2713-2723 SP_7 denotes SARS-CoV-2
T79552 2783-2791 SP_10 denotes SARS-CoV
T9250 2801-2807 NCBITaxon:9606 denotes humans
T92501 2813-2822 NCBITaxon:40674 denotes mammalian
T2420 2913-2922 GO:0010467 denotes expressed
T73122 2923-2928 SO:0000704 denotes genes
T82219 2968-2978 SP_7 denotes SARS-CoV-2
T66958 2988-2998 UBERON:0000483;CL:0000066 denotes epithelial
T23934 2999-3004 CL:0000066 denotes cells
T72983 3087-3092 SO:0000704 denotes genes
T43760 3165-3170 CHEBI:23888;CHEBI:23888 denotes drugs
T77548 3255-3260 CHEBI:23888;CHEBI:23888 denotes drugs
T40625 3364-3370 PR:000029554 denotes IFITM3
T31697 3395-3399 SO:0000704 denotes gene
T4873 3418-3431 CHEBI:17418;CHEBI:17418 denotes valproic acid
T78212 3441-3447 PR:000029554 denotes IFITM3
T94358 3453-3463 GO:0010467 denotes expression
T97843 3572-3576 SO:0000704;GO:0010467 denotes Gene
T17475 3577-3587 GO:0010467 denotes Expression
T82114 3655-3659 SO:0000704;GO:0010467 denotes gene
T73418 3660-3670 GO:0010467 denotes expression
T6262 3695-3703 SP_10 denotes SARS-COV
T73274 3706-3711 NCBITaxon:10239 denotes virus
T46826 3968-3973 SO:0000704 denotes genes
T14477 4048-4057 GO:0010467 denotes expressed
T95507 4127-4132 SO:0000704 denotes genes
T90148 4206-4215 GO:0010467 denotes expressed
T43975 4216-4221 SO:0000704 denotes genes
T31188 4349-4354 SO:0000704 denotes genes
T77559 4402-4410 SP_10 denotes SARS-COV
T50142 4470-4475 SO:0000704 denotes genes
T51718 4587-4592 SO:0000704;GO:0010467 denotes genes
T30873 4593-4603 GO:0010467 denotes expression
T16837 4686-4691 SP_6;NCBITaxon:9606 denotes human
T96908 4692-4707 UBERON:0000115 denotes lung epithelium
T25762 4745-4755 SP_7 denotes SARS-CoV-2
T89956 4825-4835 SP_7 denotes SARS-CoV-2
T34217 4954-4958 SO:0000704;GO:0010467 denotes Gene
T2274 4959-4969 GO:0010467 denotes Expression
T70683 7326-7331 SO:0000704 denotes genes
T24525 7352-7361 GO:0010467 denotes expressed
T57190 7362-7367 SO:0000704 denotes genes
T21356 7401-7408 NCBITaxon:10239 denotes virally
T6910 7457-7462 SO:0000704 denotes genes
T90369 7551-7559 SP_10 denotes SARS-COV
T59099 7577-7582 UBERON:0000170 denotes lungs
T5505 7623-7628 SO:0000704 denotes genes
T39450 7661-7666 SO:0000704 denotes Genes
T28801 7762-7770 SP_10 denotes SARS-CoV
T98703 7788-7792 UBERON:0002048 denotes lung
T41682 9702-9709 NCBITaxon:species denotes Species
T90987 9731-9739 SP_10 denotes SARS-CoV
T21656 9778-9786 SP_10 denotes SARS-CoV
T17132 9796-9800 UBERON:0002048 denotes lung
T10549 9801-9807 UBERON:0000479 denotes tissue
T92153 9935-9940 SP_6;NCBITaxon:9606 denotes Human
T5043 9941-9951 UBERON:0000483;CL:0000066 denotes epithelial
T6056 9952-9957 CL:0000066 denotes cells
T53348 10023-10027 NCBITaxon:10088 denotes mice
T87948 10126-10134 NCBITaxon:9539 denotes macaques
T45888 10176-10184 SP_7 denotes COVID-19
T47593 10194-10204 UBERON:0000483;CL:0000066 denotes epithelial
T73019 10205-10210 CL:0000066 denotes cells
T96432 10289-10296 NCBITaxon:species denotes species
T7405 10323-10333 UBERON:0000483;CL:0000066 denotes Epithelial
T93100 10334-10339 CL:0000066 denotes cells
T94836 10354-10364 SP_7 denotes SARS-CoV-2
T40703 10385-10389 PR:000011576 denotes OAS3
T68338 10391-10395 PR:000017471 denotes XAF1
T89458 10397-10402 PR:000008907 denotes IFI44
T4984 10409-10413 PR:000002049 denotes IRF7
T13400 10415-10420 PR:000002087 denotes STAT1
T39980 10422-10427 PR:000029552 denotes IFIT3
T15175 10433-10438 PR:000029550 denotes IFIT1
T81229 10445-10450 SP_6;NCBITaxon:9606 denotes Human
T72779 10451-10455 UBERON:0002048;CL:0000082 denotes Lung
T91688 10456-10461 CL:0000082 denotes Cells
T20807 10463-10467 NCBITaxon:10088 denotes Mice
T64815 10473-10483 NCBITaxon:6073 denotes Cynomolgus
T40216 10484-10488 NCBITaxon:9539 denotes maca
T10356 10518-10525 NCBITaxon:40674 denotes mammals
T21883 10530-10535 SP_6;NCBITaxon:9606 denotes human
T93444 10556-10564 SP_10 denotes SARS-CoV
T54592 10565-10570 NCBITaxon:10239 denotes virus
T75796 10696-10704 SP_10 denotes SARS-CoV
T71956 11553-11558 SO:0000704 denotes Genes
T66377 11579-11585 UBERON:0002405 denotes Immune
T66508 11636-11641 SO:0000704 denotes genes
T55635 11669-11675 GO:0045087 denotes innate
T95628 11676-11682 GO:0045087;UBERON:0002405 denotes immune
T14672 11683-11692 GO:0045087 denotes responses
T33571 11705-11712 NCBITaxon:10239 denotes viruses
T18144 11732-11741 GO:0005829 denotes cytosolic
T77075 11742-11753 GO:0042770 denotes DNA-sensing
T64214 11763-11781 GO:0007179 denotes Toll-like receptor
T92716 11866-11871 NCBITaxon:10239 denotes viral
T85252 11896-11897 GO:0045087 denotes I
T88289 11898-11926 GO:0060337 denotes interferon signaling pathway
T36398 11928-11935 GO:0006952 denotes defense
T23672 11952-11957 NCBITaxon:10239 denotes virus
T76262 12001-12006 SO:0000704 denotes genes
T30649 12008-12021 GO:0032479 denotes regulation of
T3449 12064-12080 PR:000024938 denotes interferon-alpha
T83626 12086-12096 GO:0050688 denotes regulation
T14886 12097-12099 GO:0045595 denotes of
T36068 12100-12107 GO:0050688 denotes defense
T10526 12120-12125 NCBITaxon:10239 denotes virus
T27498 12166-12171 SO:0000704 denotes Genes
T32965 12214-12228 UBERON:0002405 denotes immune systems
T49139 12237-12247 GO:0060759 denotes regulation
T22448 12305-12311 UBERON:0002405;GO:0050777 denotes immune
T34543 12312-12320 GO:0050777 denotes response
T82230 12322-12329 CL:0000763 denotes myeloid
T59623 12330-12334 CL:0000763;GO:0002262 denotes cell
T55096 12335-12346 GO:0002262 denotes homeostasis
T31401 12361-12371 GO:0065007 denotes regulation
T97488 12385-12393 NCBITaxon:1 denotes organism
T851 12584-12589 SO:0000704 denotes Genes
T58886 15083-15089 PR:000029554 denotes IFITM3
T29242 15091-15095 PR:000011575 denotes OAS2
T84874 15101-15104 PR:000010788 denotes MX1
T89410 15140-15150 SP_7 denotes SARS-CoV-2
T97882 15160-15170 UBERON:0000483;CL:0000066 denotes Epithelial
T55274 15171-15176 CL:0000066 denotes Cells
T86142 15192-15197 SO:0000704;GO:0010467 denotes genes
T41980 15198-15208 GO:0010467 denotes expression
T6663 15231-15236 SP_6;NCBITaxon:9606 denotes human
T70140 15237-15257 UBERON:0002031 denotes bronchial epithelium
T20976 15272-15282 SP_7 denotes SARS-CoV-2
T95746 15341-15347 PR:000029554 denotes IFITM3
T22438 15408-15413 SO:0000704 denotes genes
T52907 15414-15418 PR:000011575 denotes OAS2
T64564 15423-15426 PR:000010788 denotes MX1
T45188 15598-15604 PR:000029554 denotes IFITM3
T18183 15640-15649 GO:0010467 denotes expressed
T66558 15650-15655 SO:0000704 denotes genes
T81029 15689-15694 SO:0000704 denotes genes
T96655 15760-15765 NCBITaxon:10239 denotes virus
T51630 15820-15824 SO:0000704;GO:0010467 denotes Gene
T3893 15825-15835 GO:0010467 denotes expression
T97774 15855-15860 SO:0000704 denotes genes
T61365 15872-15882 UBERON:0000483 denotes epithelium
T46940 15897-15907 SP_7 denotes SARS-CoV-2
T54270 15987-15995 CHEBI:17418;CHEBI:17418 denotes Valproic
T25639 16020-16026 PR:000029554 denotes IFITM3
T95949 16032-16042 GO:0010467 denotes Expression
T29963 16135-16140 CHEBI:23888;CHEBI:23888 denotes drugs
T51490 16178-16188 GO:0010467 denotes expression
T41507 16192-16198 PR:000029554 denotes IFITM3
T60041 16253-16266 CHEBI:39867;CHEBI:39867 denotes valproic acid
T86463 16298-16303 CHEBI:8502;CHEBI:8502 denotes tert-
T86484 16303-16321 CHEBI:28714;CHEBI:28714 denotes butylhydroperoxide
T23617 16347-16353 PR:000029554 denotes IFITM3
T11997 16354-16364 GO:0010467 denotes expression
T39596 16371-16385 CHEBI:32509;CHEBI:32509 denotes pirinixic acid
T77656 16387-16400 CHEBI:15344;CHEBI:15344 denotes acetaminophen
T59028 16414-16423 CHEBI:23965;CHEBI:23965 denotes estradiol
T28513 16442-16452 GO:0010467 denotes expression
T12057 16519-16525 PR:000029554 denotes IFITM3
T44950 16531-16541 GO:0010467 denotes expression
T70315 17602-17615 CHEBI:39867;CHEBI:39867 denotes valproic acid
T21276 17631-17637 PR:000029554 denotes IFITM3
T63254 17643-17653 GO:0010467 denotes expression
T28820 17657-17663 UBERON:0002405;CL:0000738 denotes immune
T11478 17664-17669 CL:0000738 denotes cells
T7870 17677-17682 UBERON:0000178 denotes blood
T42565 17847-17860 CHEBI:39867;CHEBI:39867 denotes valproic acid
T36537 17879-17894 GO:0010628 denotes upregulation of
T81133 17918-17924 PR:000029554 denotes IFITM3
T56000 18074-18078 SO:0000704;GO:0010467 denotes gene
T82694 18079-18089 GO:0010467 denotes expression
T10197 18093-18099 PR:000029554 denotes IFITM3
T27145 18107-18112 UBERON:0000178 denotes blood
T34972 18138-18151 CHEBI:39867;CHEBI:39867 denotes valproic acid
T15129 18311-18316 NCBITaxon:10239 denotes viral
T39761 18343-18353 SP_7 denotes SARS-CoV-2
T57145 18366-18379 UBERON:0002405 denotes immune system
T82465 18448-18456 CHEBI:35224;CHEBI:35224 denotes effector
T21636 18493-18497 NCBITaxon:10088 denotes mice
T35146 18512-18520 SP_10 denotes SARS-CoV
T75736 18591-18595 UBERON:0002048 denotes lung
T61131 18658-18676 CL:0009002 denotes inflammatory cells
T93853 18692-18696 UBERON:0002048 denotes lung
T2056 18775-18782 NCBITaxon:10239 denotes virally
T11902 18791-18796 PR:000001471 denotes IL-10
T24458 18825-18834 NCBITaxon:2 denotes bacterial
T23416 18869-18873 PR:000001136 denotes IL1β
T17316 18925-18929 UBERON:0002048 denotes lung
T14638 18961-18971 SP_7 denotes SARS-CoV-2
T69545 19050-19055 NCBITaxon:10239 denotes viral
T85705 19186-19194 SP_10 denotes SARS-CoV
T63336 19214-19224 SP_7 denotes SARS-CoV-2
T20495 19261-19265 SO:0000704 denotes gene
T29851 19314-19320 PR:000029554 denotes IFITM3
T13819 19322-19328 PR:000029554 denotes IFITM3
T91988 19367-19376 GO:0005768 denotes endosomes
T53405 19381-19390 GO:0005764 denotes lysosomes
T6099 19419-19428 NCBITaxon:40674 denotes mammalian
T81308 19460-19464 SO:0000704 denotes gene
T34321 19499-19512 GO:0016020 denotes transmembrane
T50792 19554-19560 UBERON:0002405 denotes immune
T20376 19575-19580 NCBITaxon:10239 denotes virus
T91274 19600-19608 GO:0065007 denotes regulate
T26451 19632-19637 NCBITaxon:10239 denotes virus
T23518 19642-19651 GO:0006897;GO:0030139 denotes endocytic
T6916 19652-19660 GO:0030139 denotes vesicles
T84075 19682-19691 GO:0005764 denotes lysosomes
T72519 19702-19708 PR:000029554 denotes IFITM3
T74767 19727-19735 GO:0016020 denotes membrane
T98262 19770-19775 GO:0005886;NCBITaxon:10239 denotes virus
T35056 19776-19784 GO:0036338;GO:0061025 denotes membrane
T49375 19785-19791 GO:0061025 denotes fusion
T5723 19849-19854 NCBITaxon:10239 denotes viral
T33181 19874-19883 GO:0005737 denotes cytoplasm
T85134 19891-19899 GO:0065007 denotes controls
T32637 19900-19905 NCBITaxon:10239 denotes viral
T73875 19926-19935 NCBITaxon:7719 denotes influenza
T63557 19951-19956 SP_6;NCBITaxon:9606 denotes human
T31847 19957-19963 UBERON:0001005 denotes airway
T52046 19964-19974 UBERON:0000483;CL:0002368 denotes epithelial
T7878 19975-19980 CL:0002368 denotes cells
T77967 19982-19988 PR:000029554 denotes IFITM3
T65581 20014-20019 NCBITaxon:10239 denotes virus
T54493 20031-20040 GO:0005768 denotes endosomes
T38373 20045-20054 GO:0005764 denotes lysosomes
T67315 20130-20135 NCBITaxon:10239;GO:0035376 denotes viral
T29506 20136-20141 GO:0035376 denotes entry
T46800 20153-20162 CL:0000233 denotes platelets
T72688 20167-20181 CL:0000556 denotes megakaryocytes
T65496 20218-20224 PR:000029554 denotes IFITM3
T8712 20236-20241 NCBITaxon:10239 denotes viral
T48357 20291-20301 UBERON:0000483;CL:0000066 denotes epithelial
T17094 20302-20306 CL:0000066 denotes cell
T46255 20320-20330 CL:0000738 denotes leukocytes
T37179 20334-20338 UBERON:0002048 denotes lung
T69584 20355-20362 UBERON:0001005 denotes airways
T60385 20383-20390 GO:0010467 denotes express
T3275 20391-20397 PR:000029554 denotes IFITM3
T2112 20412-20417 NCBITaxon:10239 denotes viral
T97998 20458-20463 NCBITaxon:10239 denotes viral
T12358 20475-20482 NCBITaxon:10239 denotes viruses
T61214 20504-20510 PR:000029554 denotes IFITM3
T65690 20511-20521 GO:0010467 denotes expression
T75942 20528-20534 PR:000029554 denotes IFITM3
T99305 20569-20576 CL:0000084 denotes T cells
T11120 20580-20587 UBERON:0001005 denotes airways
T8490 20599-20606 UBERON:0000912;CL:0000738 denotes mucosal
T57947 20607-20613 CL:0000738;UBERON:0002405 denotes immune
T77443 20614-20618 CL:0000738 denotes cell
T65509 20637-20641 UBERON:0002048 denotes Lung
T88213 20646-20657 CL:0000080 denotes circulating
T72086 20658-20664 UBERON:0002405;CL:0000738 denotes immune
T4389 20665-20670 CL:0000738 denotes cells
T73419 20688-20695 GO:0010467 denotes express
T87384 20701-20707 PR:000029554 denotes IFITM3
T30634 20719-20726 UBERON:0000479 denotes tissues
T80343 20765-20773 SP_7 denotes COVID-19
T59504 20834-20840 PR:000029554 denotes IFITM3
T41084 20853-20856 SO:0000694 denotes SNP
T12072 20939-20943 SO:0000694 denotes SNPs
T87674 20947-20953 PR:000029554 denotes IFITM3
T15484 21034-21042 SP_7 denotes COVID-19
T3281 21049-21055 PR:000029554 denotes IFITM3
T23269 21129-21138 NCBITaxon:7719 denotes influenza
T43735 21139-21144 NCBITaxon:10239 denotes virus
T88623 21161-21171 GO:0010467 denotes Expressing
T3734 21176-21180 SO:0000704 denotes gene
T44000 21237-21243 PR:000029554 denotes IFITM3
T47934 21310-21315 SO:0001114 denotes helix
T94559 21355-21360 NCBITaxon:10239 denotes viral
T39289 21390-21397 NCBITaxon:10239 denotes viruses
T76499 21403-21412 NCBITaxon:7719 denotes influenza
T28020 21413-21414 NCBITaxon:8782 denotes A
T23395 21415-21420 NCBITaxon:10239 denotes virus
T70416 21425-21429 NCBITaxon:7955 denotes Zika
T99342 21430-21435 NCBITaxon:10239 denotes virus
T44562 21462-21471 GO:0065007 denotes regulates
T91501 21476-21482 PR:000029554 denotes IFITM3
T8534 21515-21522 NCBITaxon:10239 denotes viruses
T17440 21590-21594 PR:000012249 denotes PALM
T14201 21635-21645 CHEBI:35366;CHEBI:35366 denotes fatty acid
T65002 21730-21736 SO:0000417 denotes domain
T50366 21796-21802 PR:000029554 denotes IFITM3
T41290 21871-21875 SP_2;NCBITaxon:6960 denotes bats
T1730 21932-21937 NCBITaxon:10239 denotes viral
T6198 21954-21960 PR:000029554 denotes IFITM3
T65332 22080-22083 SP_2 denotes bat
T77968 22096-22101 NCBITaxon:10239 denotes viral
T64441 22160-22168 SP_7 denotes COVID-19
T93690 22213-22219 PR:000029554 denotes IFITM3
T15878 22223-22226 SO:0000694 denotes SNP
T97989 22239-22243 UBERON:0002048;CL:0000082 denotes lung
T56188 22244-22249 CL:0000082 denotes cells
T76822 22264-22270 PR:000029554 denotes IFITM3
T78391 22324-22329 SO:0001114 denotes helix
T96175 22418-22424 PR:000029554 denotes IFITM3
T56388 22437-22445 SP_7 denotes COVID-19
T16793 22548-22561 CHEBI:17418;CHEBI:17418 denotes valproic acid
T4907 22581-22591 GO:0010467 denotes expression
T28692 22595-22601 PR:000029554 denotes IFITM3
T67349 22636-22646 SP_7 denotes SARS-CoV-2
T20803 22647-22652 SP_6;NCBITaxon:9606 denotes human
T88265 22697-22710 CHEBI:39867;CHEBI:39867 denotes valproic acid
T2809 22744-22748 CHEBI:23888;CHEBI:23888 denotes drug
T46444 22753-22761 SP_7 denotes COVID-19
T93971 22849-22862 CHEBI:39867;CHEBI:39867 denotes valproic acid
T88860 22893-22898 PR:000000125 denotes nsP12
T67548 22941-22954 CHEBI:39867;CHEBI:39867 denotes Valproic acid
T62181 23023-23030 CHEBI:15358;CHEBI:15358;PR:000041244 denotes histone
T68056 23068-23072 SO:0000704;GO:0010467 denotes gene
T68654 23073-23083 GO:0010467 denotes expression
T1549 23105-23118 CHEBI:39867;CHEBI:39867 denotes Valproic acid
T21371 23178-23185 NCBITaxon:10239 denotes viruses
T6532 23207-23224 GO:0005886 denotes cellular membrane
T47519 23286-23299 CHEBI:39867;CHEBI:39867 denotes valproic acid
T72200 23309-23313 CHEBI:23888;CHEBI:23888 denotes drug
T77813 23427-23432 NCBITaxon:10239 denotes viral
T11651 23497-23511 CHEBI:50905;CHEBI:50905 denotes teratogenicity
T16703 23625-23635 CHEBI:74562;CHEBI:74562 denotes Valpromide
T2249 23646-23658 CHEBI:17418;CHEBI:17418 denotes valnoctamide
T85261 23732-23745 CHEBI:39867;CHEBI:39867 denotes Valproic Acid
T24384 23757-23765 SP_7 denotes COVID-19
T74547 23902-23915 CHEBI:39867;CHEBI:39867 denotes valproic acid
T74217 23936-23944 SP_7 denotes COVID-19
T96598 24405-24410 CHEBI:23888;CHEBI:23888 denotes drugs
T22519 24506-24514 SP_7 denotes COVID-19
T87603 24636-24641 CHEBI:23888;CHEBI:23888 denotes drugs

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T1 19-40 Body_part denotes Transmembrane Protein http://purl.org/sig/ont/fma/fma67858
T2 33-40 Body_part denotes Protein http://purl.org/sig/ont/fma/fma67257
T3 99-103 Body_part denotes Lung http://purl.org/sig/ont/fma/fma7195
T4 104-120 Body_part denotes Epithelial Cells http://purl.org/sig/ont/fma/fma66768
T5 115-120 Body_part denotes Cells http://purl.org/sig/ont/fma/fma68646
T6 750-766 Body_part denotes epithelial cells http://purl.org/sig/ont/fma/fma66768
T7 761-766 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T8 978-982 Body_part denotes gene http://purl.org/sig/ont/fma/fma74402
T9 1027-1031 Body_part denotes mRNA http://purl.org/sig/ont/fma/fma67122
T10 2823-2828 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T11 2988-3004 Body_part denotes epithelial cells http://purl.org/sig/ont/fma/fma66768
T12 2999-3004 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T13 3395-3399 Body_part denotes gene http://purl.org/sig/ont/fma/fma74402
T14 3448-3452 Body_part denotes mRNA http://purl.org/sig/ont/fma/fma67122
T15 3572-3576 Body_part denotes Gene http://purl.org/sig/ont/fma/fma74402
T16 3655-3659 Body_part denotes gene http://purl.org/sig/ont/fma/fma74402
T17 4660-4663 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T18 4692-4696 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T19 4697-4707 Body_part denotes epithelium http://purl.org/sig/ont/fma/fma9639
T20 4954-4958 Body_part denotes Gene http://purl.org/sig/ont/fma/fma74402
T21 5044-5048 Body_part denotes Gene http://purl.org/sig/ont/fma/fma74402
T22 5263-5279 Body_part denotes epithelial cells http://purl.org/sig/ont/fma/fma66768
T23 5274-5279 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T24 5321-5326 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T25 5358-5363 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T26 5564-5577 Body_part denotes glycoproteins http://purl.org/sig/ont/fma/fma62925
T27 5889-5894 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T28 5917-5922 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T29 6147-6152 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T30 6204-6209 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T31 6232-6237 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T32 6547-6552 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T33 6573-6578 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T34 6609-6614 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T35 6929-6936 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T36 7024-7030 Body_part denotes Genome http://purl.org/sig/ont/fma/fma84116
T37 7150-7154 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T38 7155-7161 Body_part denotes tissue http://purl.org/sig/ont/fma/fma9637
T39 7577-7582 Body_part denotes lungs http://purl.org/sig/ont/fma/fma68877
T40 7788-7792 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T41 7959-7966 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T42 8000-8007 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T43 8071-8078 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T44 8142-8149 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T45 8381-8392 Body_part denotes bone marrow http://purl.org/sig/ont/fma/fma9608
T46 8401-8405 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T47 8440-8449 Body_part denotes chemokine http://purl.org/sig/ont/fma/fma241981
T48 8556-8569 Body_part denotes interleukin 6 http://purl.org/sig/ont/fma/fma264829
T49 8556-8567 Body_part denotes interleukin http://purl.org/sig/ont/fma/fma86578
T50 8742-8752 Body_part denotes methionine http://purl.org/sig/ont/fma/fma82759
T51 8928-8935 Body_part denotes leucine http://purl.org/sig/ont/fma/fma82757
T52 8998-9007 Body_part denotes chemokine http://purl.org/sig/ont/fma/fma241981
T53 9116-9123 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T54 9176-9183 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T55 9217-9238 Body_part denotes transmembrane protein http://purl.org/sig/ont/fma/fma67858
T56 9285-9289 Body_part denotes gene http://purl.org/sig/ont/fma/fma74402
T57 9357-9365 Body_part denotes placenta http://purl.org/sig/ont/fma/fma63934
T58 9409-9416 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T59 9491-9503 Body_part denotes nuclear body http://purl.org/sig/ont/fma/fma84810
T60 9504-9511 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T61 9538-9544 Body_part denotes finger http://purl.org/sig/ont/fma/fma9666
T62 9618-9621 Body_part denotes DNA http://purl.org/sig/ont/fma/fma74412
T63 9630-9637 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T64 9657-9663 Body_part denotes finger http://purl.org/sig/ont/fma/fma9666
T65 9796-9800 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T66 9801-9807 Body_part denotes tissue http://purl.org/sig/ont/fma/fma9637
T67 9941-9957 Body_part denotes epithelial cells http://purl.org/sig/ont/fma/fma66768
T68 9952-9957 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T69 10194-10210 Body_part denotes epithelial cells http://purl.org/sig/ont/fma/fma66768
T70 10205-10210 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T71 10323-10339 Body_part denotes Epithelial cells http://purl.org/sig/ont/fma/fma66768
T72 10334-10339 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T73 10451-10455 Body_part denotes Lung http://purl.org/sig/ont/fma/fma7195
T74 10456-10461 Body_part denotes Cells http://purl.org/sig/ont/fma/fma68646
T75 10536-10541 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T76 10949-10953 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T77 10954-10958 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T78 10985-10989 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T79 10990-10994 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T80 11043-11047 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T81 11048-11052 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T82 11090-11094 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T83 11095-11099 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T84 11328-11332 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T85 11333-11337 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T86 11349-11353 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T87 11354-11358 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T88 11392-11396 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T89 11397-11401 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T90 11424-11428 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T91 11429-11433 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T92 11603-11606 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T93 11701-11704 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T94 11732-11741 Body_part denotes cytosolic http://purl.org/sig/ont/fma/fma66836
T95 11742-11745 Body_part denotes DNA http://purl.org/sig/ont/fma/fma74412
T96 12214-12228 Body_part denotes immune systems http://purl.org/sig/ont/fma/fma9825
T97 12263-12271 Body_part denotes cytokine http://purl.org/sig/ont/fma/fma84050
T98 12322-12334 Body_part denotes myeloid cell http://purl.org/sig/ont/fma/fma70339
T99 12330-12334 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T100 12385-12401 Body_part denotes organism process http://purl.org/sig/ont/fma/fma284628
T101 13252-13256 Body_part denotes gene http://purl.org/sig/ont/fma/fma74402
T102 13643-13651 Body_part denotes cytokine http://purl.org/sig/ont/fma/fma84050
T103 14152-14161 Body_part denotes Cytosolic http://purl.org/sig/ont/fma/fma66836
T104 14162-14165 Body_part denotes DNA http://purl.org/sig/ont/fma/fma74412
T105 14741-14753 Body_part denotes Myeloid cell http://purl.org/sig/ont/fma/fma70339
T106 14749-14753 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T107 15010-15026 Body_part denotes organism process http://purl.org/sig/ont/fma/fma284628
T108 15160-15176 Body_part denotes Epithelial Cells http://purl.org/sig/ont/fma/fma66768
T109 15171-15176 Body_part denotes Cells http://purl.org/sig/ont/fma/fma68646
T110 15237-15257 Body_part denotes bronchial epithelium http://purl.org/sig/ont/fma/fma67782
T111 15247-15257 Body_part denotes epithelium http://purl.org/sig/ont/fma/fma9639
T112 15605-15609 Body_part denotes mRNA http://purl.org/sig/ont/fma/fma67122
T113 15797-15801 Body_part denotes mRNA http://purl.org/sig/ont/fma/fma67122
T114 15820-15824 Body_part denotes Gene http://purl.org/sig/ont/fma/fma74402
T115 15872-15882 Body_part denotes epithelium http://purl.org/sig/ont/fma/fma9639
T116 15934-15939 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T117 16027-16031 Body_part denotes mRNA http://purl.org/sig/ont/fma/fma67122
T118 16173-16177 Body_part denotes mRNA http://purl.org/sig/ont/fma/fma67122
T119 16526-16530 Body_part denotes mRNA http://purl.org/sig/ont/fma/fma67122
T120 16711-16715 Body_part denotes mRNA http://purl.org/sig/ont/fma/fma67122
T121 16851-16855 Body_part denotes mRNA http://purl.org/sig/ont/fma/fma67122
T122 16969-16973 Body_part denotes mRNA http://purl.org/sig/ont/fma/fma67122
T123 17068-17072 Body_part denotes mRNA http://purl.org/sig/ont/fma/fma67122
T124 17199-17203 Body_part denotes mRNA http://purl.org/sig/ont/fma/fma67122
T125 17315-17319 Body_part denotes mRNA http://purl.org/sig/ont/fma/fma67122
T126 17427-17431 Body_part denotes mRNA http://purl.org/sig/ont/fma/fma67122
T127 17546-17550 Body_part denotes mRNA http://purl.org/sig/ont/fma/fma67122
T128 17638-17642 Body_part denotes mRNA http://purl.org/sig/ont/fma/fma67122
T129 17664-17669 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T130 17677-17682 Body_part denotes blood http://purl.org/sig/ont/fma/fma9670
T131 17899-17903 Body_part denotes mRNA http://purl.org/sig/ont/fma/fma67122
T132 18074-18078 Body_part denotes gene http://purl.org/sig/ont/fma/fma74402
T133 18107-18112 Body_part denotes blood http://purl.org/sig/ont/fma/fma9670
T134 18366-18379 Body_part denotes immune system http://purl.org/sig/ont/fma/fma9825
T135 18457-18462 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T136 18591-18595 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T137 18671-18676 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T138 18692-18696 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T139 18697-18705 Body_part denotes cytokine http://purl.org/sig/ont/fma/fma84050
T140 18706-18715 Body_part denotes chemokine http://purl.org/sig/ont/fma/fma241981
T141 18869-18872 Body_part denotes IL1 http://purl.org/sig/ont/fma/fma86583
T142 18925-18929 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T143 19033-19037 Body_part denotes body http://purl.org/sig/ont/fma/fma256135
T144 19261-19265 Body_part denotes gene http://purl.org/sig/ont/fma/fma74402
T145 19298-19305 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T146 19341-19348 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T147 19367-19376 Body_part denotes endosomes http://purl.org/sig/ont/fma/fma67180
T148 19381-19390 Body_part denotes lysosomes http://purl.org/sig/ont/fma/fma63836
T149 19439-19444 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T150 19460-19464 Body_part denotes gene http://purl.org/sig/ont/fma/fma74402
T151 19499-19521 Body_part denotes transmembrane proteins http://purl.org/sig/ont/fma/fma67858
T152 19642-19660 Body_part denotes endocytic vesicles http://purl.org/sig/ont/fma/fma67463
T153 19682-19691 Body_part denotes lysosomes http://purl.org/sig/ont/fma/fma63836
T154 19874-19883 Body_part denotes cytoplasm http://purl.org/sig/ont/fma/fma66835
T155 19964-19980 Body_part denotes epithelial cells http://purl.org/sig/ont/fma/fma66768
T156 19975-19980 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T157 20031-20040 Body_part denotes endosomes http://purl.org/sig/ont/fma/fma67180
T158 20045-20054 Body_part denotes lysosomes http://purl.org/sig/ont/fma/fma63836
T159 20153-20162 Body_part denotes platelets http://purl.org/sig/ont/fma/fma62851
T160 20167-20181 Body_part denotes megakaryocytes http://purl.org/sig/ont/fma/fma83555
T161 20291-20306 Body_part denotes epithelial cell http://purl.org/sig/ont/fma/fma66768
T162 20302-20306 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T163 20320-20330 Body_part denotes leukocytes http://purl.org/sig/ont/fma/fma62852
T164 20334-20338 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T165 20489-20494 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T166 20571-20576 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T167 20614-20618 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T168 20637-20641 Body_part denotes Lung http://purl.org/sig/ont/fma/fma7195
T169 20665-20670 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T170 20719-20726 Body_part denotes tissues http://purl.org/sig/ont/fma/fma9637
T171 20787-20795 Body_part denotes cytokine http://purl.org/sig/ont/fma/fma84050
T172 21176-21180 Body_part denotes gene http://purl.org/sig/ont/fma/fma74402
T173 21286-21293 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T174 21310-21315 Body_part denotes helix http://purl.org/sig/ont/fma/fma60992
T175 21590-21594 Body_part denotes PALM http://purl.org/sig/ont/fma/fma24920
T176 21635-21645 Body_part denotes fatty acid http://purl.org/sig/ont/fma/fma82738
T177 21655-21663 Body_part denotes cysteine http://purl.org/sig/ont/fma/fma82751
T178 21690-21697 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T179 21718-21724 Body_part denotes finger http://purl.org/sig/ont/fma/fma9666
T180 21843-21850 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T181 22023-22030 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T182 22239-22243 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T183 22244-22249 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T184 22324-22329 Body_part denotes helix http://purl.org/sig/ont/fma/fma60992
T185 22576-22580 Body_part denotes mRNA http://purl.org/sig/ont/fma/fma67122
T186 22653-22660 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T187 22661-22668 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T188 22681-22684 Body_part denotes map http://purl.org/sig/ont/fma/fma67847
T189 23023-23030 Body_part denotes histone http://purl.org/sig/ont/fma/fma74413
T190 23068-23072 Body_part denotes gene http://purl.org/sig/ont/fma/fma74402
T191 23207-23224 Body_part denotes cellular membrane http://purl.org/sig/ont/fma/fma63841

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 99-103 Body_part denotes Lung http://purl.obolibrary.org/obo/UBERON_0002048
T2 4692-4707 Body_part denotes lung epithelium http://purl.obolibrary.org/obo/UBERON_0000115
T3 4692-4696 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T4 4697-4707 Body_part denotes epithelium http://purl.obolibrary.org/obo/UBERON_0000483
T5 7150-7154 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T6 7155-7161 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T7 7788-7792 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T8 8381-8392 Body_part denotes bone marrow http://purl.obolibrary.org/obo/UBERON_0002371
T9 9357-9365 Body_part denotes placenta http://purl.obolibrary.org/obo/UBERON_0001987
T10 9538-9544 Body_part denotes finger http://purl.obolibrary.org/obo/UBERON_0002389
T11 9657-9663 Body_part denotes finger http://purl.obolibrary.org/obo/UBERON_0002389
T12 9796-9800 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T13 9801-9807 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T14 10451-10455 Body_part denotes Lung http://purl.obolibrary.org/obo/UBERON_0002048
T15 10949-10953 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T16 10985-10989 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T17 11043-11047 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T18 11090-11094 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T19 11328-11332 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T20 11349-11353 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T21 11392-11396 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T22 11424-11428 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T23 12214-12228 Body_part denotes immune systems http://purl.obolibrary.org/obo/UBERON_0002405
T24 15237-15257 Body_part denotes bronchial epithelium http://purl.obolibrary.org/obo/UBERON_0002031
T25 15247-15257 Body_part denotes epithelium http://purl.obolibrary.org/obo/UBERON_0000483
T26 15872-15882 Body_part denotes epithelium http://purl.obolibrary.org/obo/UBERON_0000483
T27 17677-17682 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178
T28 18107-18112 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178
T29 18366-18379 Body_part denotes immune system http://purl.obolibrary.org/obo/UBERON_0002405
T30 18591-18595 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T31 18692-18696 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T32 18925-18929 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T33 20334-20338 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T34 20637-20641 Body_part denotes Lung http://purl.obolibrary.org/obo/UBERON_0002048
T35 21310-21315 Body_part denotes helix http://purl.obolibrary.org/obo/UBERON_0002488
T36 21718-21724 Body_part denotes finger http://purl.obolibrary.org/obo/UBERON_0002389
T37 22239-22243 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T38 22324-22329 Body_part denotes helix http://purl.obolibrary.org/obo/UBERON_0002488

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id tao:has_standard_notation
2 42-48 Gene denotes IFITM3 Gene:10410
3 79-98 Disease denotes SARS-CoV-2 Infected MESH:C000657245
13 947-953 Gene denotes IFITM3 Gene:10410
14 298-308 Species denotes SARS-CoV-2 Tax:2697049
15 639-645 Species denotes humans Tax:9606
16 988-1001 Chemical denotes valproic acid MESH:D014635
17 154-162 Disease denotes COVID-19 MESH:C000657245
18 621-638 Disease denotes SARS-CoV infected MESH:C000657245
19 730-749 Disease denotes SARS-CoV-2 infected MESH:C000657245
20 1342-1352 Disease denotes infections MESH:D007239
21 1358-1366 Disease denotes COVID-19 MESH:C000657245
42 3364-3370 Gene denotes IFITM3 Gene:10410
43 3441-3447 Gene denotes IFITM3 Gene:10410
44 1382-1395 Species denotes Coronaviruses Tax:11118
45 1562-1575 Species denotes coronaviruses Tax:11118
46 1584-1592 Species denotes SARS-CoV Tax:694009
47 1605-1613 Species denotes MERS-CoV Tax:1335626
48 1667-1677 Species denotes SARS-CoV-2 Tax:2697049
49 2713-2723 Species denotes SARS-CoV-2 Tax:2697049
50 2801-2807 Species denotes humans Tax:9606
51 2813-2822 Species denotes mammalian Tax:9606
52 2248-2259 Chemical denotes chloroquine MESH:D002738
53 2275-2293 Chemical denotes hydroxychloroquine MESH:D006886
54 3418-3431 Chemical denotes valproic acid MESH:D014635
55 1639-1647 Disease denotes COVID-19 MESH:C000657245
56 1769-1777 Disease denotes COVID-19 MESH:C000657245
57 1844-1863 Disease denotes infectious diseases MESH:D003141
58 1890-1898 Disease denotes COVID-19 MESH:C000657245
59 2470-2478 Disease denotes COVID-19 MESH:C000657245
60 2783-2800 Disease denotes SARS-CoV infected MESH:C000657245
61 2968-2987 Disease denotes SARS-CoV-2 infected MESH:C000657245
71 3695-3703 Species denotes SARS-COV Tax:694009
72 4686-4691 Species denotes human Tax:9606
73 4745-4755 Species denotes SARS-CoV-2 Tax:2697049
74 4825-4835 Species denotes SARS-CoV-2 Tax:2697049
75 3732-3740 Disease denotes infected MESH:D007239
76 3745-3758 Disease denotes mock-infected MESH:D007239
77 3791-3800 Disease denotes infection MESH:D007239
78 4402-4420 Disease denotes SARS-COV infection MESH:D045169
79 4731-4739 Disease denotes infected MESH:D007239
125 7255-7259 Gene denotes TLR3 Gene:142980
126 5134-5141 Species denotes ferrets Tax:9669
127 5169-5175 Species denotes Ferret Tax:9669
128 5177-5185 Species denotes SARS-CoV Tax:694009
129 5247-5252 Species denotes human Tax:9606
130 5288-5296 Species denotes SARS-CoV Tax:694009
131 5382-5390 Species denotes SARS-CoV Tax:694009
132 5444-5449 Species denotes human Tax:9606
133 5463-5471 Species denotes SARS-CoV Tax:694009
134 5537-5545 Species denotes SARS-CoV Tax:694009
135 5634-5642 Species denotes SARS CoV Tax:694009
136 5669-5674 Species denotes mouse Tax:10090
137 5754-5758 Species denotes mice Tax:10090
138 5760-5768 Species denotes SARS CoV Tax:694009
139 6119-6124 Species denotes human Tax:9606
140 6133-6138 Species denotes human Tax:9606
141 6307-6315 Species denotes SARS-CoV Tax:694009
142 6387-6395 Species denotes SARS-CoV Tax:694009
143 6773-6777 Species denotes mice Tax:10090
144 6911-6919 Species denotes SARS-CoV Tax:694009
145 6992-6996 Species denotes mice Tax:10090
146 7054-7062 Species denotes SARS-CoV Tax:694009
147 7144-7149 Species denotes Mouse Tax:10090
148 7190-7195 Species denotes mouse Tax:10090
149 7214-7222 Species denotes SARS-CoV Tax:694009
150 7246-7250 Species denotes mice Tax:10090
151 7263-7267 Species denotes mice Tax:10090
152 5116-5133 Disease denotes SARS-CoV-infected MESH:C000657245
153 5306-5315 Disease denotes infection MESH:D007239
154 5454-5462 Disease denotes zoonotic MESH:D015047
155 5648-5657 Disease denotes infection MESH:D007239
156 5734-5743 Disease denotes infection MESH:D007239
157 5839-5849 Disease denotes infections MESH:D007239
158 5992-6009 Disease denotes icSARS CoV urbani MESH:C000657245
159 6106-6115 Disease denotes infection MESH:D007239
160 6154-6164 Disease denotes infections MESH:D007239
161 6332-6354 Disease denotes SARS-BatSRBD infection MESH:D045169
162 6484-6507 Disease denotes icSARS ExoNI infections MESH:D007239
163 6746-6762 Disease denotes virus infections MESH:D001102
164 5351-5357 CellLine denotes Calu-3 CVCL:0609
165 5882-5888 CellLine denotes Calu-3 CVCL:0609
166 5910-5916 CellLine denotes Calu-3 CVCL:0609
167 6225-6231 CellLine denotes Calu-3 CVCL:0609
168 6540-6546 CellLine denotes Calu-3 CVCL:0609
169 6602-6608 CellLine denotes Calu-3 CVCL:0609
175 7551-7559 Species denotes SARS-COV Tax:694009
176 7388-7396 Disease denotes infected MESH:D007239
177 7409-7417 Disease denotes infected MESH:D007239
178 7560-7569 Disease denotes infection MESH:D007239
179 7606-7615 Disease denotes infection MESH:D007239
207 7899-7904 Gene denotes DDX58 Gene:23586
208 7933-7938 Gene denotes IFI44 Gene:10561
209 7974-7979 Gene denotes IFIT1 Gene:3434
210 7981-8040 Gene denotes interferon induced protein with tetratricopeptide repeats 1 Gene:3434
211 8045-8050 Gene denotes IFIT2 Gene:3433
212 8375-8379 Gene denotes BST2 Gene:684
213 8420-8426 Gene denotes CXCL10 Gene:3627
214 8464-8469 Gene denotes DHX58 Gene:79132
215 8496-8501 Gene denotes IFIH1 Gene:64135
216 8574-8578 Gene denotes IRF7 Gene:3665
217 8659-8665 Gene denotes PARP14 Gene:54625
218 8716-8721 Gene denotes RSAD2 Gene:91543
219 8810-8815 Gene denotes STAT1 Gene:6772
220 8872-8877 Gene denotes USP18 Gene:11274
221 8915-8920 Gene denotes BATF2 Gene:116071
222 8978-8984 Gene denotes CXCL11 Gene:6373
223 9021-9027 Gene denotes EPSTI1 Gene:94240
224 9150-9155 Gene denotes IFI35 Gene:3430
225 9190-9196 Gene denotes IFITM3 Gene:10410
226 9198-9240 Gene denotes interferon induced transmembrane protein 3 Gene:10410
227 9244-9249 Gene denotes ISG20 Gene:3669
228 9296-9301 Gene denotes PARP9 Gene:83666
229 9515-9521 Gene denotes TRAFD1 Gene:10906
230 9568-9574 Gene denotes TRIM21 Gene:6737
231 9643-9650 Gene denotes ZC3HAV1 Gene:56829
232 8928-8935 Chemical denotes leucine MESH:D007930
233 9065-9076 CellLine denotes HERC6 HECT CVCL:6999
236 7762-7780 Disease denotes SARS-CoV infection MESH:C000657245
237 7816-7825 Disease denotes infection MESH:D007239
239 9731-9749 Disease denotes SARS-CoV Infection MESH:C000657245
259 10380-10383 Gene denotes MX1 Gene:4599
260 10385-10389 Gene denotes OAS3 Gene:4940
261 10391-10395 Gene denotes XAF1 Gene:54739
262 10397-10402 Gene denotes IFI44 Gene:10561
263 10404-10407 Gene denotes MX2 Gene:4600
264 10409-10413 Gene denotes IRF7 Gene:3665
265 10415-10420 Gene denotes STAT1 Gene:6772
266 10422-10427 Gene denotes IFIT3 Gene:3437
267 10433-10438 Gene denotes IFIT1 Gene:3434
268 9935-9940 Species denotes Human Tax:9606
269 10023-10027 Species denotes mice Tax:10090
270 10093-10099 Species denotes Ferret Tax:9669
271 10354-10364 Species denotes SARS-CoV-2 Tax:2697049
272 10445-10450 Species denotes Human Tax:9606
273 10463-10467 Species denotes Mice Tax:10090
274 9778-9795 Disease denotes SARS-CoV infected MESH:C000657245
275 10176-10184 Disease denotes COVID-19 MESH:C000657245
276 10185-10193 Disease denotes infected MESH:D007239
277 10340-10348 Disease denotes infected MESH:D007239
281 10530-10535 Species denotes human Tax:9606
282 10556-10564 Species denotes SARS-CoV Tax:694009
283 10542-10550 Disease denotes infected MESH:D007239
320 10866-10872 Species denotes Ferret Tax:9669
321 10894-10900 Species denotes Ferret Tax:9669
322 10943-10948 Species denotes Human Tax:9606
323 10979-10984 Species denotes Human Tax:9606
324 11037-11042 Species denotes Human Tax:9606
325 11059-11063 Species denotes Mice Tax:10090
326 11084-11089 Species denotes Human Tax:9606
327 11106-11110 Species denotes Mice Tax:10090
328 11153-11157 Species denotes Mice Tax:10090
329 11178-11182 Species denotes Mice Tax:10090
330 11225-11229 Species denotes Mice Tax:10090
331 11236-11242 Species denotes Ferret Tax:9669
332 11271-11277 Species denotes Ferret Tax:9669
333 11287-11293 Species denotes Ferret Tax:9669
334 11322-11327 Species denotes Human Tax:9606
335 11343-11348 Species denotes Human Tax:9606
336 11386-11391 Species denotes Human Tax:9606
337 11408-11412 Species denotes Mice Tax:10090
338 11418-11423 Species denotes Human Tax:9606
339 11440-11444 Species denotes Mice Tax:10090
340 11472-11476 Species denotes Mice Tax:10090
341 11483-11487 Species denotes Mice Tax:10090
342 11515-11519 Species denotes Mice Tax:10090
343 11526-11532 Species denotes Ferret Tax:9669
344 10771-10779 Disease denotes infected MESH:D007239
345 10798-10806 Disease denotes COVID-19 MESH:C000657245
346 10814-10822 Disease denotes COVID-19 MESH:C000657245
347 10851-10859 Disease denotes COVID-19 MESH:C000657245
348 10879-10887 Disease denotes COVID-19 MESH:C000657245
349 10928-10936 Disease denotes COVID-19 MESH:C000657245
350 10964-10972 Disease denotes COVID-19 MESH:C000657245
351 11022-11030 Disease denotes COVID-19 MESH:C000657245
352 11069-11077 Disease denotes COVID-19 MESH:C000657245
353 11138-11146 Disease denotes COVID-19 MESH:C000657245
354 11163-11171 Disease denotes COVID-19 MESH:C000657245
355 11210-11218 Disease denotes COVID-19 MESH:C000657245
358 10696-10704 Species denotes SARS-CoV Tax:694009
359 10682-10690 Disease denotes infected MESH:D007239
365 12022-12039 Gene denotes type I interferon
366 11986-11989 Gene denotes IFN Gene:3439
367 12130-12139 Species denotes Influenza Tax:11320
368 11849-11852 Gene denotes IFN Gene:3439
369 11866-11882 Disease denotes viral infections MESH:D001102
531 12795-12799 Gene denotes BST2 Gene:684
532 12801-12806 Gene denotes IFI35 Gene:3430
533 12808-12813 Gene denotes IFIT2 Gene:3433
534 12815-12820 Gene denotes IFIT1 Gene:3434
535 12822-12827 Gene denotes IFIT3 Gene:3437
536 12829-12833 Gene denotes IRF7 Gene:3665
537 12835-12840 Gene denotes ISG20 Gene:3669
538 12842-12845 Gene denotes MX1 Gene:4599
539 12847-12850 Gene denotes MX2 Gene:4600
540 12852-12856 Gene denotes OAS2 Gene:4939
541 12858-12862 Gene denotes OAS3 Gene:4940
542 12864-12869 Gene denotes SP100 Gene:6672
543 12871-12876 Gene denotes STAT1 Gene:6772
544 12878-12883 Gene denotes ISG15 Gene:9636
545 12885-12891 Gene denotes IFITM3 Gene:10410
546 12893-12898 Gene denotes USP18 Gene:11274
547 12900-12904 Gene denotes XAF1 Gene:54739
548 12906-12910 Gene denotes ZBP1 Gene:81030
549 12912-12917 Gene denotes RSAD2 Gene:91543
550 12919-12925 Gene denotes TRIM21 Gene:6737
551 12927-12932 Gene denotes DDX58 Gene:23586
552 12934-12937 Gene denotes IL6 Gene:3569
553 12939-12945 Gene denotes CXCL10 Gene:3627
554 12947-12953 Gene denotes CXCL11 Gene:6373
555 12955-12961 Gene denotes PARP14 Gene:54625
556 12963-12968 Gene denotes PARP9 Gene:83666
557 12970-12977 Gene denotes ZC3HAV1 Gene:56829
558 12979-12984 Gene denotes DHX58 Gene:79132
559 13076-13080 Gene denotes BST2 Gene:684
560 13082-13087 Gene denotes IFIT2 Gene:3433
561 13089-13094 Gene denotes IFIT1 Gene:3434
562 13096-13101 Gene denotes IFIT3 Gene:3437
563 13103-13106 Gene denotes IL6 Gene:3569
564 13108-13114 Gene denotes CXCL10 Gene:3627
565 13116-13120 Gene denotes IRF7 Gene:3665
566 13122-13127 Gene denotes ISG20 Gene:3669
567 13129-13132 Gene denotes MX1 Gene:4599
568 13134-13137 Gene denotes MX2 Gene:4600
569 13139-13143 Gene denotes OAS2 Gene:4939
570 13145-13149 Gene denotes OAS3 Gene:4940
571 13151-13156 Gene denotes STAT1 Gene:6772
572 13158-13163 Gene denotes ISG15 Gene:9636
573 13165-13171 Gene denotes IFITM3 Gene:10410
574 13173-13178 Gene denotes DDX58 Gene:23586
575 13180-13187 Gene denotes ZC3HAV1 Gene:56829
576 13189-13193 Gene denotes RTP4 Gene:64108
577 13195-13200 Gene denotes IFIH1 Gene:64135
578 13202-13207 Gene denotes DHX58 Gene:79132
579 13209-13214 Gene denotes PARP9 Gene:83666
580 13216-13221 Gene denotes RSAD2 Gene:91543
581 13223-13228 Gene denotes IFI44 Gene:10561
582 13230-13235 Gene denotes PLAC8 Gene:51316
583 13237-13242 Gene denotes BATF2 Gene:116071
584 13347-13352 Gene denotes IFIT1 Gene:3434
585 13354-13357 Gene denotes MX1 Gene:4599
586 13359-13362 Gene denotes MX2 Gene:4600
587 13364-13368 Gene denotes OAS2 Gene:4939
588 13370-13374 Gene denotes OAS3 Gene:4940
589 13376-13381 Gene denotes STAT1 Gene:6772
590 13383-13388 Gene denotes ISG15 Gene:9636
591 13390-13395 Gene denotes USP18 Gene:11274
592 13397-13402 Gene denotes DDX58 Gene:23586
593 13466-13469 Gene denotes IL6 Gene:3569
594 13471-13477 Gene denotes CXCL10 Gene:3627
595 13479-13483 Gene denotes IRF7 Gene:3665
596 13485-13488 Gene denotes MX1 Gene:4599
597 13490-13494 Gene denotes OAS2 Gene:4939
598 13496-13500 Gene denotes OAS3 Gene:4940
599 13502-13507 Gene denotes STAT1 Gene:6772
600 13509-13514 Gene denotes DDX58 Gene:23586
601 13516-13521 Gene denotes IFIH1 Gene:64135
602 13523-13528 Gene denotes RSAD2 Gene:91543
603 13530-13534 Gene denotes BST2 Gene:684
604 13536-13541 Gene denotes SP100 Gene:6672
605 13543-13549 Gene denotes TRIM21 Gene:6737
606 13551-13557 Gene denotes IFITM3 Gene:10410
607 13559-13565 Gene denotes PARP14 Gene:54625
608 13567-13572 Gene denotes PARP9 Gene:83666
609 13574-13579 Gene denotes IFIT1 Gene:3434
610 13687-13690 Gene denotes IL6 Gene:3569
611 13692-13696 Gene denotes IRF7 Gene:3665
612 13698-13703 Gene denotes STAT1 Gene:6772
613 13705-13710 Gene denotes USP18 Gene:11274
614 13712-13717 Gene denotes DDX58 Gene:23586
615 13719-13725 Gene denotes PARP14 Gene:54625
616 13727-13732 Gene denotes IFIH1 Gene:64135
617 13734-13738 Gene denotes ZBP1 Gene:81030
618 13740-13745 Gene denotes PARP9 Gene:83666
619 13747-13754 Gene denotes ZC3HAV1 Gene:56829
620 13861-13865 Gene denotes IRF7 Gene:3665
621 13867-13873 Gene denotes TRIM21 Gene:6737
622 13875-13880 Gene denotes STAT1 Gene:6772
623 13882-13887 Gene denotes ISG15 Gene:9636
624 13889-13894 Gene denotes DDX58 Gene:23586
625 13896-13901 Gene denotes IFIH1 Gene:64135
626 13903-13908 Gene denotes DHX58 Gene:79132
627 13910-13914 Gene denotes ZBP1 Gene:81030
628 13916-13922 Gene denotes TRAFD1 Gene:10906
629 13924-13929 Gene denotes USP18 Gene:11274
630 13931-13937 Gene denotes PARP14 Gene:54625
631 13939-13944 Gene denotes PARP9 Gene:83666
632 13946-13951 Gene denotes RSAD2 Gene:91543
633 13953-13959 Gene denotes CXCL10 Gene:3627
634 13961-13965 Gene denotes BST2 Gene:684
635 13967-13970 Gene denotes IL6 Gene:3569
636 13972-13977 Gene denotes IFIT1 Gene:3434
637 13979-13984 Gene denotes SP100 Gene:6672
638 13986-13991 Gene denotes BATF2 Gene:116071
639 14083-14087 Gene denotes BST2 Gene:684
640 14089-14094 Gene denotes IFIT2 Gene:3433
641 14096-14101 Gene denotes IFIT3 Gene:3437
642 14103-14106 Gene denotes MX2 Gene:4600
643 14108-14114 Gene denotes IFITM3 Gene:10410
644 14116-14121 Gene denotes STAT1 Gene:6772
645 14123-14127 Gene denotes XAF1 Gene:54739
646 14206-14209 Gene denotes IL6 Gene:3569
647 14211-14217 Gene denotes CXCL10 Gene:3627
648 14219-14223 Gene denotes IRF7 Gene:3665
649 14225-14230 Gene denotes DDX58 Gene:23586
650 14232-14236 Gene denotes ZBP1 Gene:81030
651 14238-14243 Gene denotes USP18 Gene:11274
652 14245-14251 Gene denotes TRIM21 Gene:6737
653 14354-14359 Gene denotes IFIT1 Gene:3434
654 14361-14366 Gene denotes STAT1 Gene:6772
655 14368-14373 Gene denotes DDX58 Gene:23586
656 14375-14380 Gene denotes DHX58 Gene:79132
657 14382-14387 Gene denotes PARP9 Gene:83666
658 14389-14393 Gene denotes BST2 Gene:684
659 14395-14398 Gene denotes IL6 Gene:3569
660 14400-14405 Gene denotes RSAD2 Gene:91543
661 14493-14496 Gene denotes IL6 Gene:3569
662 14498-14504 Gene denotes CXCL10 Gene:3627
663 14506-14510 Gene denotes IRF7 Gene:3665
664 14512-14518 Gene denotes CXCL11 Gene:6373
665 14520-14525 Gene denotes STAT1 Gene:6772
666 14527-14531 Gene denotes OAS2 Gene:4939
667 14533-14538 Gene denotes ISG15 Gene:9636
668 14540-14545 Gene denotes IFI44 Gene:10561
669 14547-14552 Gene denotes PLAC8 Gene:51316
670 14554-14559 Gene denotes HERC6 Gene:55008
671 14561-14566 Gene denotes DHX58 Gene:79132
672 14568-14573 Gene denotes SP100 Gene:6672
673 14676-14680 Gene denotes BST2 Gene:684
674 14682-14688 Gene denotes TRAFD1 Gene:10906
675 14690-14696 Gene denotes PARP14 Gene:54625
676 14698-14703 Gene denotes DHX58 Gene:79132
677 14792-14795 Gene denotes IL6 Gene:3569
678 14797-14802 Gene denotes STAT1 Gene:6772
679 14804-14809 Gene denotes ISG15 Gene:9636
680 14811-14815 Gene denotes IRF7 Gene:3665
681 14817-14822 Gene denotes BATF2 Gene:116071
682 14917-14922 Gene denotes IFIT2 Gene:3433
683 14924-14929 Gene denotes IFIT1 Gene:3434
684 14931-14936 Gene denotes SP100 Gene:6672
685 14938-14943 Gene denotes PARP9 Gene:83666
686 15053-15058 Gene denotes IFIT1 Gene:3434
687 15060-15066 Gene denotes TRIM21 Gene:6737
688 15068-15073 Gene denotes DHX58 Gene:79132
689 15075-15081 Gene denotes IFITM3 Gene:10410
690 13301-13304 Gene denotes IFN Gene:3439
691 13427-13436 Species denotes Influenza Tax:11320
696 15083-15089 Gene denotes IFITM3 Gene:10410
697 15091-15095 Gene denotes OAS2 Gene:4939
698 15101-15104 Gene denotes MX1 Gene:4599
699 15140-15159 Disease denotes SARS-CoV-2 Infected MESH:C000657245
709 15341-15347 Gene denotes IFITM3 Gene:10410
710 15414-15418 Gene denotes OAS2 Gene:4939
711 15423-15426 Gene denotes MX1 Gene:4599
712 15598-15604 Gene denotes IFITM3 Gene:10410
713 15231-15236 Species denotes human Tax:9606
714 15272-15282 Species denotes SARS-CoV-2 Tax:2697049
715 15258-15266 Disease denotes infected MESH:D007239
716 15306-15314 Disease denotes infected MESH:D007239
717 15715-15723 Disease denotes infected MESH:D007239
721 15897-15907 Species denotes SARS-CoV-2 Tax:2697049
722 15883-15891 Disease denotes infected MESH:D007239
723 15925-15933 Disease denotes infected MESH:D007239
726 16020-16026 Gene denotes IFITM3 Gene:10410
727 15987-16000 Chemical denotes Valproic Acid MESH:D014635
737 16192-16198 Gene denotes IFITM3 Gene:10410
738 16347-16353 Gene denotes IFITM3 Gene:10410
739 16298-16302 Gene denotes tert Gene:7015
740 16253-16266 Chemical denotes valproic acid MESH:D014635
741 16268-16274 Chemical denotes carbon MESH:D002244
742 16286-16292 Chemical denotes nickel MESH:D009532
743 16371-16385 Chemical denotes pirinixic acid MESH:C006253
744 16387-16400 Chemical denotes acetaminophen MESH:D000082
745 16406-16423 Chemical denotes Ethinyl estradiol MESH:D004997
757 16704-16710 Gene denotes IFITM3 Gene:10410
758 16844-16850 Gene denotes IFITM3 Gene:10410
759 16962-16968 Gene denotes IFITM3 Gene:10410
760 17061-17067 Gene denotes IFITM3 Gene:10410
761 17192-17198 Gene denotes IFITM3 Gene:10410
762 17308-17314 Gene denotes IFITM3 Gene:10410
763 17420-17426 Gene denotes IFITM3 Gene:10410
764 17539-17545 Gene denotes IFITM3 Gene:10410
765 17090-17094 Gene denotes Tert Gene:7015
766 16671-16674 Gene denotes CAS Gene:9564
767 17133-17137 Gene denotes tert Gene:7015
769 16519-16525 Gene denotes IFITM3 Gene:10410
776 17631-17637 Gene denotes IFITM3 Gene:10410
777 17918-17924 Gene denotes IFITM3 Gene:10410
778 17835-17843 Species denotes patients Tax:9606
779 17928-17936 Species denotes patients Tax:9606
780 17602-17615 Chemical denotes valproic acid MESH:D014635
781 17847-17860 Chemical denotes valproic acid MESH:D014635
785 18093-18099 Gene denotes IFITM3 Gene:10410
786 18116-18124 Species denotes patients Tax:9606
787 18138-18151 Chemical denotes valproic acid MESH:D014635
800 18791-18796 Gene denotes IL-10 Gene:3586
801 18869-18873 Gene denotes IL1β Gene:3552
802 18878-18882 Gene denotes TNFα Gene:7124
803 18343-18353 Species denotes SARS-CoV-2 Tax:2697049
804 18493-18497 Species denotes mice Tax:10090
805 18512-18520 Species denotes SARS-CoV Tax:694009
806 18961-18971 Species denotes SARS-CoV-2 Tax:2697049
807 18987-18990 Gene denotes IFN Gene:3439
808 18405-18408 Gene denotes IFN Gene:3439
809 18498-18506 Disease denotes infected MESH:D007239
810 18825-18844 Disease denotes bacterial infection MESH:D001424
811 18925-18936 Disease denotes lung damage MESH:D008171
819 19143-19146 Gene denotes IFN Gene:3439
820 19314-19320 Gene denotes IFITM3 Gene:10410
821 19322-19328 Gene denotes IFITM3 Gene:10410
822 19186-19194 Species denotes SARS-CoV Tax:694009
823 19214-19224 Species denotes SARS-CoV-2 Tax:2697049
824 19419-19428 Species denotes mammalian Tax:9606
825 19203-19212 Disease denotes infection MESH:D007239
837 19702-19708 Gene denotes IFITM3 Gene:10410
838 19982-19988 Gene denotes IFITM3 Gene:10410
839 20218-20224 Gene denotes IFITM3 Gene:10410
840 19951-19956 Species denotes human Tax:9606
841 19926-19935 Species denotes influenza Tax:11320
842 20261-20270 Species denotes influenza Tax:11320
843 19575-19591 Disease denotes virus infections MESH:D001102
844 19736-19744 Disease denotes rigidity MESH:D009127
845 19938-19947 Disease denotes infection MESH:D007239
846 20077-20086 Disease denotes infection MESH:D007239
847 20271-20280 Disease denotes infection MESH:D007239
855 20391-20397 Gene denotes IFITM3 Gene:10410
856 20504-20510 Gene denotes IFITM3 Gene:10410
857 20528-20534 Gene denotes IFITM3 Gene:10410
858 20564-20567 Gene denotes CD8 Gene:925
859 20701-20707 Gene denotes IFITM3 Gene:10410
860 20412-20428 Disease denotes viral infections MESH:D001102
861 20765-20773 Disease denotes COVID-19 MESH:C000657245
871 20834-20840 Gene denotes IFITM3 Gene:10410
872 20947-20953 Gene denotes IFITM3 Gene:10410
873 21049-21055 Gene denotes IFITM3 Gene:10410
874 20983-20992 Species denotes influenza Tax:11320
875 20993-21002 Disease denotes infection MESH:D007239
876 21034-21042 Disease denotes COVID-19 MESH:C000657245
877 21112-21121 Disease denotes mortality MESH:D003643
878 21139-21154 Disease denotes virus infection MESH:D001102
879 20841-20848 Mutation denotes rs12252 rs12252
895 21237-21243 Gene denotes IFITM3 Gene:10410
896 21476-21482 Gene denotes IFITM3 Gene:10410
897 21796-21802 Gene denotes IFITM3 Gene:10410
898 21954-21960 Gene denotes IFITM3 Gene:10410
899 22213-22219 Gene denotes IFITM3 Gene:10410
900 22264-22270 Gene denotes IFITM3 Gene:10410
901 22418-22424 Gene denotes IFITM3 Gene:10410
902 21403-21420 Species denotes influenza A virus Tax:11320
903 21425-21435 Species denotes Zika virus Tax:64320
904 21635-21645 Chemical denotes fatty acid MESH:D005227
905 21655-21663 Chemical denotes cysteine MESH:D003545
906 21932-21948 Disease denotes viral infections MESH:D001102
907 22096-22111 Disease denotes viral infection MESH:D001102
908 22160-22168 Disease denotes COVID-19 MESH:C000657245
909 22437-22445 Disease denotes COVID-19 MESH:C000657245
932 22595-22601 Gene denotes IFITM3 Gene:10410
933 22636-22646 Species denotes SARS-CoV-2 Tax:2697049
934 22647-22652 Species denotes human Tax:9606
935 22548-22561 Chemical denotes valproic acid MESH:D014635
936 22697-22710 Chemical denotes valproic acid MESH:D014635
937 22849-22862 Chemical denotes valproic acid MESH:D014635
938 22941-22954 Chemical denotes Valproic acid MESH:D014635
939 23105-23118 Chemical denotes Valproic acid MESH:D014635
940 23286-23299 Chemical denotes valproic acid MESH:D014635
941 23561-23570 Chemical denotes valproate MESH:D014635
942 23625-23635 Chemical denotes Valpromide MESH:C004651
943 23637-23640 Chemical denotes VPD MESH:C004651
944 23646-23658 Chemical denotes valnoctamide MESH:C045179
945 23660-23663 Chemical denotes VCD MESH:C045179
946 23732-23745 Chemical denotes Valproic Acid MESH:D014635
947 23902-23915 Chemical denotes valproic acid MESH:D014635
948 22753-22761 Disease denotes COVID-19 MESH:C000657245
949 22994-23002 Disease denotes epilepsy MESH:D004827
950 23427-23440 Disease denotes viral disease MESH:D001102
951 23478-23492 Disease denotes hepatotoxicity MESH:D056486
952 23757-23765 Disease denotes COVID-19 MESH:C000657245
953 23936-23944 Disease denotes COVID-19 MESH:C000657245
955 24096-24109 Disease denotes novel disease MESH:C000657245
958 24490-24500 Disease denotes infections MESH:D007239
959 24506-24514 Disease denotes COVID-19 MESH:C000657245

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T1 79-87 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T2 154-162 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T3 298-306 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T4 621-629 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T5 730-738 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T6 1342-1352 Disease denotes infections http://purl.obolibrary.org/obo/MONDO_0005550
T7 1358-1366 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T8 1584-1592 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T9 1639-1647 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T10 1667-1675 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T11 1769-1777 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T12 1844-1854 Disease denotes infectious http://purl.obolibrary.org/obo/MONDO_0005550
T13 1890-1898 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T14 2470-2478 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T15 2713-2721 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T16 2783-2791 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T17 2968-2976 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T18 3695-3699 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T19 3791-3800 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T20 4402-4406 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T21 4411-4420 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T22 4745-4753 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T23 4825-4833 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T24 5116-5124 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T25 5177-5185 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T26 5288-5296 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T27 5306-5315 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T28 5382-5390 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T29 5463-5471 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T30 5537-5545 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T31 5634-5638 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T32 5648-5657 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T33 5734-5743 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T34 5760-5764 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T35 5839-5849 Disease denotes infections http://purl.obolibrary.org/obo/MONDO_0005550
T36 6106-6115 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T37 6154-6164 Disease denotes infections http://purl.obolibrary.org/obo/MONDO_0005550
T38 6307-6315 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T39 6317-6321 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T40 6332-6336 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T41 6345-6354 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T42 6358-6361 Disease denotes HAE http://purl.obolibrary.org/obo/MONDO_0019623
T43 6373-6376 Disease denotes HAE http://purl.obolibrary.org/obo/MONDO_0019623
T44 6387-6395 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T45 6397-6401 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T46 6411-6415 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T47 6497-6507 Disease denotes infections http://purl.obolibrary.org/obo/MONDO_0005550
T48 6702-6706 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T49 6726-6730 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T50 6746-6762 Disease denotes virus infections http://purl.obolibrary.org/obo/MONDO_0005108
T51 6825-6829 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T52 6838-6842 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T53 6911-6919 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T54 7054-7062 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T55 7214-7222 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T56 7551-7555 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T57 7560-7569 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T58 7606-7615 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T59 7762-7780 Disease denotes SARS-CoV infection http://purl.obolibrary.org/obo/MONDO_0005091
T60 7771-7780 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T61 7816-7825 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T62 9430-9437 Disease denotes sterile http://purl.obolibrary.org/obo/MONDO_0005047
T63 9731-9739 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T64 9740-9749 Disease denotes Infection http://purl.obolibrary.org/obo/MONDO_0005550
T65 9778-9786 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T66 10176-10184 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T67 10354-10362 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T68 10556-10564 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T69 10696-10704 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T70 10798-10806 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T71 10814-10822 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T72 10851-10859 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T73 10879-10887 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T74 10928-10936 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T75 10964-10972 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T76 11022-11030 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T77 11069-11077 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T78 11138-11146 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T79 11163-11171 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T80 11210-11218 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T81 11866-11882 Disease denotes viral infections http://purl.obolibrary.org/obo/MONDO_0005108
T82 12130-12139 Disease denotes Influenza http://purl.obolibrary.org/obo/MONDO_0005812
T83 13265-13268 Disease denotes HSA http://purl.obolibrary.org/obo/MONDO_0011848
T84 13427-13436 Disease denotes Influenza http://purl.obolibrary.org/obo/MONDO_0005812
T85 15140-15148 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T86 15272-15280 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T87 15897-15905 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T88 18343-18351 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T89 18512-18520 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T90 18825-18844 Disease denotes bacterial infection http://purl.obolibrary.org/obo/MONDO_0005113
T91 18835-18844 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T92 18961-18969 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T93 19186-19194 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T94 19203-19212 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T95 19214-19222 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T96 19575-19591 Disease denotes virus infections http://purl.obolibrary.org/obo/MONDO_0005108
T97 19926-19935 Disease denotes influenza http://purl.obolibrary.org/obo/MONDO_0005812
T98 19938-19947 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T99 20077-20086 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T100 20261-20280 Disease denotes influenza infection http://purl.obolibrary.org/obo/MONDO_0005812
T101 20271-20280 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T102 20412-20428 Disease denotes viral infections http://purl.obolibrary.org/obo/MONDO_0005108
T103 20765-20773 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T104 20983-21002 Disease denotes influenza infection http://purl.obolibrary.org/obo/MONDO_0005812
T105 20993-21002 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T106 21034-21042 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T107 21129-21138 Disease denotes influenza http://purl.obolibrary.org/obo/MONDO_0005812
T108 21139-21154 Disease denotes virus infection http://purl.obolibrary.org/obo/MONDO_0005108
T109 21145-21154 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T110 21403-21412 Disease denotes influenza http://purl.obolibrary.org/obo/MONDO_0005812
T111 21425-21429 Disease denotes Zika http://purl.obolibrary.org/obo/MONDO_0018661
T112 21932-21948 Disease denotes viral infections http://purl.obolibrary.org/obo/MONDO_0005108
T113 22096-22111 Disease denotes viral infection http://purl.obolibrary.org/obo/MONDO_0005108
T114 22102-22111 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T115 22160-22168 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T116 22437-22445 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T117 22636-22644 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T118 22753-22761 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T119 22994-23002 Disease denotes epilepsy http://purl.obolibrary.org/obo/MONDO_0005027
T120 23157-23167 Disease denotes infectious http://purl.obolibrary.org/obo/MONDO_0005550
T121 23427-23440 Disease denotes viral disease http://purl.obolibrary.org/obo/MONDO_0005108
T122 23757-23765 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T123 23936-23944 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T124 24490-24500 Disease denotes infections http://purl.obolibrary.org/obo/MONDO_0005550
T125 24506-24514 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T1 99-120 http://purl.obolibrary.org/obo/CL_0000082 denotes Lung Epithelial Cells
T2 280-281 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T3 315-316 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T4 459-460 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T5 639-645 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T6 706-711 http://purl.obolibrary.org/obo/OGG_0000000002 denotes genes
T7 750-760 http://purl.obolibrary.org/obo/CL_0000066 denotes epithelial
T8 761-766 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T9 847-852 http://purl.obolibrary.org/obo/OGG_0000000002 denotes genes
T10 978-982 http://purl.obolibrary.org/obo/OGG_0000000002 denotes gene
T11 1192-1193 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T12 1400-1401 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T13 1418-1425 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T14 1908-1911 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T15 2076-2077 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T16 2498-2499 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T17 2520-2521 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T18 2801-2807 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T19 2823-2828 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T20 2839-2840 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T21 2923-2928 http://purl.obolibrary.org/obo/OGG_0000000002 denotes genes
T22 2988-2998 http://purl.obolibrary.org/obo/CL_0000066 denotes epithelial
T23 2999-3004 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T24 3030-3031 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T25 3087-3092 http://purl.obolibrary.org/obo/OGG_0000000002 denotes genes
T26 3395-3399 http://purl.obolibrary.org/obo/OGG_0000000002 denotes gene
T27 3572-3576 http://purl.obolibrary.org/obo/OGG_0000000002 denotes Gene
T28 3655-3659 http://purl.obolibrary.org/obo/OGG_0000000002 denotes gene
T29 3706-3711 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T30 3776-3778 http://purl.obolibrary.org/obo/CLO_0001382 denotes 48
T31 3968-3973 http://purl.obolibrary.org/obo/OGG_0000000002 denotes genes
T32 4127-4132 http://purl.obolibrary.org/obo/OGG_0000000002 denotes genes
T33 4216-4221 http://purl.obolibrary.org/obo/OGG_0000000002 denotes genes
T34 4349-4354 http://purl.obolibrary.org/obo/OGG_0000000002 denotes genes
T35 4394-4396 http://purl.obolibrary.org/obo/CLO_0001382 denotes 48
T36 4470-4475 http://purl.obolibrary.org/obo/OGG_0000000002 denotes genes
T37 4587-4592 http://purl.obolibrary.org/obo/OGG_0000000002 denotes genes
T38 4686-4691 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T39 4692-4707 http://purl.obolibrary.org/obo/UBERON_0000115 denotes lung epithelium
T40 4793-4794 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T41 4954-4958 http://purl.obolibrary.org/obo/OGG_0000000002 denotes Gene
T42 5044-5048 http://purl.obolibrary.org/obo/OGG_0000000002 denotes Gene
T43 5134-5141 http://purl.obolibrary.org/obo/NCBITaxon_9669 denotes ferrets
T44 5169-5175 http://purl.obolibrary.org/obo/NCBITaxon_9669 denotes Ferret
T45 5247-5252 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T46 5263-5273 http://purl.obolibrary.org/obo/CL_0000066 denotes epithelial
T47 5274-5279 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T48 5317-5320 http://purl.obolibrary.org/obo/CLO_0052063 denotes 2B4
T49 5317-5320 http://purl.obolibrary.org/obo/CLO_0052458 denotes 2B4
T50 5321-5326 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T51 5328-5329 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T52 5351-5363 http://purl.obolibrary.org/obo/CLO_0051840 denotes Calu-3 cells
T53 5351-5363 http://purl.obolibrary.org/obo/CLO_0051841 denotes Calu-3 cells
T54 5351-5363 http://purl.obolibrary.org/obo/CLO_0051842 denotes Calu-3 cells
T55 5351-5363 http://purl.obolibrary.org/obo/CLO_0051843 denotes Calu-3 cells
T56 5351-5363 http://purl.obolibrary.org/obo/CLO_0051844 denotes Calu-3 cells
T57 5351-5357 http://purl.obolibrary.org/obo/CLO_0002192 denotes Calu-3
T58 5444-5449 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T59 5669-5674 http://purl.obolibrary.org/obo/CLO_0007836 denotes mouse
T60 5707-5711 http://purl.obolibrary.org/obo/CLO_0001757 denotes at 1
T61 5857-5860 http://purl.obolibrary.org/obo/CLO_0052063 denotes 2B4
T62 5857-5860 http://purl.obolibrary.org/obo/CLO_0052458 denotes 2B4
T63 5882-5894 http://purl.obolibrary.org/obo/CLO_0051840 denotes Calu-3 cells
T64 5882-5894 http://purl.obolibrary.org/obo/CLO_0051841 denotes Calu-3 cells
T65 5882-5894 http://purl.obolibrary.org/obo/CLO_0051842 denotes Calu-3 cells
T66 5882-5894 http://purl.obolibrary.org/obo/CLO_0051843 denotes Calu-3 cells
T67 5882-5894 http://purl.obolibrary.org/obo/CLO_0051844 denotes Calu-3 cells
T68 5882-5888 http://purl.obolibrary.org/obo/CLO_0002192 denotes Calu-3
T69 5910-5922 http://purl.obolibrary.org/obo/CLO_0051840 denotes Calu-3 cells
T70 5910-5922 http://purl.obolibrary.org/obo/CLO_0051841 denotes Calu-3 cells
T71 5910-5922 http://purl.obolibrary.org/obo/CLO_0051842 denotes Calu-3 cells
T72 5910-5922 http://purl.obolibrary.org/obo/CLO_0051843 denotes Calu-3 cells
T73 5910-5922 http://purl.obolibrary.org/obo/CLO_0051844 denotes Calu-3 cells
T74 5910-5916 http://purl.obolibrary.org/obo/CLO_0002192 denotes Calu-3
T75 6119-6124 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T76 6133-6138 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T77 6139-6146 http://purl.obolibrary.org/obo/NCBITaxon_9443 denotes primate
T78 6147-6152 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T79 6172-6175 http://purl.obolibrary.org/obo/CLO_0052063 denotes 2B4
T80 6172-6175 http://purl.obolibrary.org/obo/CLO_0052458 denotes 2B4
T81 6197-6209 http://purl.obolibrary.org/obo/CLO_0051840 denotes calu-3 cells
T82 6197-6209 http://purl.obolibrary.org/obo/CLO_0051841 denotes calu-3 cells
T83 6197-6209 http://purl.obolibrary.org/obo/CLO_0051842 denotes calu-3 cells
T84 6197-6209 http://purl.obolibrary.org/obo/CLO_0051843 denotes calu-3 cells
T85 6197-6209 http://purl.obolibrary.org/obo/CLO_0051844 denotes calu-3 cells
T86 6197-6203 http://purl.obolibrary.org/obo/CLO_0002192 denotes calu-3
T87 6225-6237 http://purl.obolibrary.org/obo/CLO_0051840 denotes Calu-3 cells
T88 6225-6237 http://purl.obolibrary.org/obo/CLO_0051841 denotes Calu-3 cells
T89 6225-6237 http://purl.obolibrary.org/obo/CLO_0051842 denotes Calu-3 cells
T90 6225-6237 http://purl.obolibrary.org/obo/CLO_0051843 denotes Calu-3 cells
T91 6225-6237 http://purl.obolibrary.org/obo/CLO_0051844 denotes Calu-3 cells
T92 6225-6231 http://purl.obolibrary.org/obo/CLO_0002192 denotes Calu-3
T93 6515-6518 http://purl.obolibrary.org/obo/CLO_0052063 denotes 2B4
T94 6515-6518 http://purl.obolibrary.org/obo/CLO_0052458 denotes 2B4
T95 6540-6552 http://purl.obolibrary.org/obo/CLO_0051840 denotes Calu-3 cells
T96 6540-6552 http://purl.obolibrary.org/obo/CLO_0051841 denotes Calu-3 cells
T97 6540-6552 http://purl.obolibrary.org/obo/CLO_0051842 denotes Calu-3 cells
T98 6540-6552 http://purl.obolibrary.org/obo/CLO_0051843 denotes Calu-3 cells
T99 6540-6552 http://purl.obolibrary.org/obo/CLO_0051844 denotes Calu-3 cells
T100 6540-6546 http://purl.obolibrary.org/obo/CLO_0002192 denotes Calu-3
T101 6568-6572 http://purl.obolibrary.org/obo/CLO_0052063 denotes 2B-4
T102 6568-6572 http://purl.obolibrary.org/obo/CLO_0052458 denotes 2B-4
T103 6573-6578 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T104 6602-6614 http://purl.obolibrary.org/obo/CLO_0051840 denotes Calu-3 cells
T105 6602-6614 http://purl.obolibrary.org/obo/CLO_0051841 denotes Calu-3 cells
T106 6602-6614 http://purl.obolibrary.org/obo/CLO_0051842 denotes Calu-3 cells
T107 6602-6614 http://purl.obolibrary.org/obo/CLO_0051843 denotes Calu-3 cells
T108 6602-6614 http://purl.obolibrary.org/obo/CLO_0051844 denotes Calu-3 cells
T109 6602-6608 http://purl.obolibrary.org/obo/CLO_0002192 denotes Calu-3
T110 6746-6751 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T111 6780-6781 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T112 6858-6865 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T113 6940-6941 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T114 7019-7021 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T115 7144-7149 http://purl.obolibrary.org/obo/CLO_0007836 denotes Mouse
T116 7150-7154 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T117 7150-7154 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T118 7188-7189 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T119 7190-7195 http://purl.obolibrary.org/obo/CLO_0007836 denotes mouse
T120 7297-7299 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T121 7326-7331 http://purl.obolibrary.org/obo/OGG_0000000002 denotes genes
T122 7362-7367 http://purl.obolibrary.org/obo/OGG_0000000002 denotes genes
T123 7457-7462 http://purl.obolibrary.org/obo/OGG_0000000002 denotes genes
T124 7577-7595 http://purl.obolibrary.org/obo/CLO_0007418 denotes lungs in the first
T125 7596-7598 http://purl.obolibrary.org/obo/CLO_0001382 denotes 48
T126 7623-7632 http://purl.obolibrary.org/obo/OGG_0000000002 denotes genes are
T127 7661-7666 http://purl.obolibrary.org/obo/OGG_0000000002 denotes Genes
T128 7788-7805 http://purl.obolibrary.org/obo/CLO_0007418 denotes lung in the first
T129 7806-7808 http://purl.obolibrary.org/obo/CLO_0001382 denotes 48
T130 7827-7832 http://purl.obolibrary.org/obo/OGG_0000000002 denotes Genes
T131 7930-7932 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T132 7971-7973 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T133 8042-8044 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T134 8113-8115 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T135 8181-8186 http://purl.obolibrary.org/obo/CLO_0001006 denotes 3 11
T136 8225-8227 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T137 8228-8231 http://purl.obolibrary.org/obo/CLO_0009915 denotes MX1
T138 8259-8261 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T139 8293-8295 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T140 8334-8339 http://purl.obolibrary.org/obo/CLO_0001006 denotes 3 11
T141 8372-8374 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T142 8381-8385 http://purl.obolibrary.org/obo/UBERON_0002481 denotes bone
T143 8393-8405 http://purl.obolibrary.org/obo/CL_0000499 denotes stromal cell
T144 8430-8433 http://purl.obolibrary.org/obo/CLO_0009645 denotes X-C
T145 8430-8433 http://purl.obolibrary.org/obo/CLO_0050824 denotes X-C
T146 8556-8569 http://purl.obolibrary.org/obo/PR_000001393 denotes interleukin 6
T147 8817-8823 http://purl.obolibrary.org/obo/SO_0000418 denotes signal
T148 8839-8848 http://purl.obolibrary.org/obo/CLO_0001658 denotes activator
T149 8908-8910 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T150 8988-8991 http://purl.obolibrary.org/obo/CLO_0009645 denotes X-C
T151 8988-8991 http://purl.obolibrary.org/obo/CLO_0050824 denotes X-C
T152 9015-9017 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T153 9029-9039 http://purl.obolibrary.org/obo/CL_0000066 denotes epithelial
T154 9103-9105 http://purl.obolibrary.org/obo/CLO_0002861 denotes E3
T155 9184-9186 http://purl.obolibrary.org/obo/CLO_0001000 denotes 35
T156 9285-9289 http://purl.obolibrary.org/obo/OGG_0000000002 denotes gene
T157 9357-9365 http://purl.obolibrary.org/obo/UBERON_0001987 denotes placenta
T158 9357-9365 http://www.ebi.ac.uk/efo/EFO_0001407 denotes placenta
T159 9604-9609 http://purl.obolibrary.org/obo/CLO_0001195 denotes 21 9
T160 9796-9800 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T161 9796-9800 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T162 9935-9940 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes Human
T163 9941-9951 http://purl.obolibrary.org/obo/CL_0000066 denotes epithelial
T164 9952-9957 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T165 10093-10099 http://purl.obolibrary.org/obo/NCBITaxon_9669 denotes Ferret
T166 10194-10204 http://purl.obolibrary.org/obo/CL_0000066 denotes epithelial
T167 10205-10210 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T168 10323-10333 http://purl.obolibrary.org/obo/CL_0000066 denotes Epithelial
T169 10334-10339 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T170 10380-10383 http://purl.obolibrary.org/obo/CLO_0009915 denotes MX1
T171 10445-10450 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes Human
T172 10451-10455 http://purl.obolibrary.org/obo/UBERON_0002048 denotes Lung
T173 10451-10455 http://www.ebi.ac.uk/efo/EFO_0000934 denotes Lung
T174 10456-10461 http://purl.obolibrary.org/obo/GO_0005623 denotes Cells
T175 10530-10541 http://purl.obolibrary.org/obo/CLO_0053065 denotes human cells
T176 10565-10570 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T177 10866-10872 http://purl.obolibrary.org/obo/NCBITaxon_9669 denotes Ferret
T178 10894-10900 http://purl.obolibrary.org/obo/NCBITaxon_9669 denotes Ferret
T179 10943-10948 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes Human
T180 10949-10953 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T181 10949-10953 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T182 10954-10958 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T183 10979-10984 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes Human
T184 10985-10989 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T185 10985-10989 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T186 10990-10994 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T187 11037-11042 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes Human
T188 11043-11047 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T189 11043-11047 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T190 11048-11052 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T191 11084-11089 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes Human
T192 11090-11094 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T193 11090-11094 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T194 11095-11099 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T195 11236-11242 http://purl.obolibrary.org/obo/NCBITaxon_9669 denotes Ferret
T196 11271-11277 http://purl.obolibrary.org/obo/NCBITaxon_9669 denotes Ferret
T197 11287-11293 http://purl.obolibrary.org/obo/NCBITaxon_9669 denotes Ferret
T198 11322-11327 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes Human
T199 11328-11332 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T200 11328-11332 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T201 11333-11337 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T202 11343-11348 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes Human
T203 11349-11353 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T204 11349-11353 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T205 11354-11358 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T206 11386-11391 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes Human
T207 11392-11396 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T208 11392-11396 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T209 11397-11401 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T210 11418-11423 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes Human
T211 11424-11428 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T212 11424-11428 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T213 11429-11433 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T214 11526-11532 http://purl.obolibrary.org/obo/NCBITaxon_9669 denotes Ferret
T215 11553-11562 http://purl.obolibrary.org/obo/OGG_0000000002 denotes Genes Are
T216 11607-11614 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes Viruses
T217 11636-11641 http://purl.obolibrary.org/obo/OGG_0000000002 denotes genes
T218 11705-11712 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T219 11782-11791 http://purl.obolibrary.org/obo/SO_0000418 denotes signaling
T220 11891-11908 http://purl.obolibrary.org/obo/PR_000024990 denotes type I interferon
T221 11909-11918 http://purl.obolibrary.org/obo/SO_0000418 denotes signaling
T222 11952-11957 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T223 12001-12006 http://purl.obolibrary.org/obo/OGG_0000000002 denotes genes
T224 12022-12039 http://purl.obolibrary.org/obo/PR_000024990 denotes type I interferon
T225 12120-12125 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T226 12140-12141 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T227 12166-12171 http://purl.obolibrary.org/obo/OGG_0000000002 denotes Genes
T228 12203-12213 http://purl.obolibrary.org/obo/CLO_0001658 denotes activating
T229 12214-12228 http://purl.obolibrary.org/obo/UBERON_0002405 denotes immune systems
T230 12330-12334 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T231 12385-12393 http://purl.obolibrary.org/obo/OBI_0100026 denotes organism
T232 12385-12393 http://purl.obolibrary.org/obo/UBERON_0000468 denotes organism
T233 12584-12589 http://purl.obolibrary.org/obo/OGG_0000000002 denotes Genes
T234 12732-12749 http://purl.obolibrary.org/obo/PR_000024990 denotes Type I interferon
T235 12750-12759 http://purl.obolibrary.org/obo/SO_0000418 denotes signaling
T236 12842-12845 http://purl.obolibrary.org/obo/CLO_0009915 denotes MX1
T237 13042-13047 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T238 13068-13070 http://purl.obolibrary.org/obo/CLO_0050507 denotes 22
T239 13129-13132 http://purl.obolibrary.org/obo/CLO_0009915 denotes MX1
T240 13252-13256 http://purl.obolibrary.org/obo/OGG_0000000002 denotes gene
T241 13265-13268 http://purl.obolibrary.org/obo/PR_000001932 denotes HSA
T242 13316-13321 http://purl.obolibrary.org/obo/OGG_0000000002 denotes genes
T243 13354-13357 http://purl.obolibrary.org/obo/CLO_0009915 denotes MX1
T244 13437-13438 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T245 13485-13488 http://purl.obolibrary.org/obo/CLO_0009915 denotes MX1
T246 13806-13823 http://purl.obolibrary.org/obo/PR_000024990 denotes type I interferon
T247 14323-14328 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T248 14449-14458 http://purl.obolibrary.org/obo/SO_0000418 denotes signaling
T249 14749-14753 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T250 14787-14790 http://purl.obolibrary.org/obo/CLO_0001079 denotes 148
T251 15010-15018 http://purl.obolibrary.org/obo/OBI_0100026 denotes organism
T252 15010-15018 http://purl.obolibrary.org/obo/UBERON_0000468 denotes organism
T253 15101-15104 http://purl.obolibrary.org/obo/CLO_0009915 denotes MX1
T254 15160-15170 http://purl.obolibrary.org/obo/CL_0000066 denotes Epithelial
T255 15171-15176 http://purl.obolibrary.org/obo/GO_0005623 denotes Cells
T256 15192-15197 http://purl.obolibrary.org/obo/OGG_0000000002 denotes genes
T257 15231-15236 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T258 15247-15257 http://purl.obolibrary.org/obo/UBERON_0000483 denotes epithelium
T259 15355-15356 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T260 15408-15413 http://purl.obolibrary.org/obo/OGG_0000000002 denotes genes
T261 15423-15426 http://purl.obolibrary.org/obo/CLO_0009915 denotes MX1
T262 15434-15435 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T263 15650-15655 http://purl.obolibrary.org/obo/OGG_0000000002 denotes genes
T264 15689-15694 http://purl.obolibrary.org/obo/OGG_0000000002 denotes genes
T265 15760-15765 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T266 15820-15824 http://purl.obolibrary.org/obo/OGG_0000000002 denotes Gene
T267 15855-15860 http://purl.obolibrary.org/obo/OGG_0000000002 denotes genes
T268 15872-15882 http://purl.obolibrary.org/obo/UBERON_0000483 denotes epithelium
T269 15934-15939 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T270 16414-16423 http://purl.obolibrary.org/obo/CHEBI_23965 denotes estradiol
T271 16747-16755 http://purl.obolibrary.org/obo/OBI_0100026 denotes Organism
T272 16747-16755 http://purl.obolibrary.org/obo/UBERON_0000468 denotes Organism
T273 17457-17466 http://purl.obolibrary.org/obo/CHEBI_23965 denotes estradiol
T274 17494-17503 http://purl.obolibrary.org/obo/CHEBI_23965 denotes Estradiol
T275 17563-17567 http://purl.obolibrary.org/obo/CLO_0050507 denotes 2 2
T276 17664-17669 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T277 17677-17682 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood
T278 17677-17682 http://www.ebi.ac.uk/efo/EFO_0000296 denotes blood
T279 17684-17685 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T280 18074-18078 http://purl.obolibrary.org/obo/OGG_0000000002 denotes gene
T281 18107-18112 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood
T282 18107-18112 http://www.ebi.ac.uk/efo/EFO_0000296 denotes blood
T283 18366-18379 http://purl.obolibrary.org/obo/UBERON_0002405 denotes immune system
T284 18414-18422 http://purl.obolibrary.org/obo/CLO_0001658 denotes activate
T285 18457-18462 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T286 18522-18523 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T287 18546-18563 http://purl.obolibrary.org/obo/PR_000024990 denotes type I interferon
T288 18572-18581 http://purl.obolibrary.org/obo/SO_0000418 denotes signaling
T289 18591-18595 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T290 18591-18595 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T291 18671-18676 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T292 18692-18696 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T293 18692-18696 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T294 18860-18861 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T295 18925-18929 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T296 18925-18929 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T297 19261-19265 http://purl.obolibrary.org/obo/OGG_0000000002 denotes gene
T298 19270-19271 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T299 19332-19336 http://purl.obolibrary.org/obo/CLO_0001557 denotes a 15
T300 19381-19390 http://purl.obolibrary.org/obo/GO_0005764 denotes lysosomes
T301 19439-19444 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T302 19460-19464 http://purl.obolibrary.org/obo/OGG_0000000002 denotes gene
T303 19475-19477 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T304 19575-19580 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T305 19632-19637 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T306 19682-19691 http://purl.obolibrary.org/obo/GO_0005764 denotes lysosomes
T307 19727-19735 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membrane
T308 19770-19775 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T309 19776-19784 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membrane
T310 19914-19916 http://purl.obolibrary.org/obo/CLO_0050507 denotes 22
T311 19936-19937 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T312 19951-19956 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T313 19957-19963 http://purl.obolibrary.org/obo/UBERON_0001005 denotes airway
T314 19964-19974 http://purl.obolibrary.org/obo/CL_0000066 denotes epithelial
T315 19975-19980 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T316 20014-20019 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T317 20045-20054 http://purl.obolibrary.org/obo/GO_0005764 denotes lysosomes
T318 20291-20301 http://purl.obolibrary.org/obo/CL_0000066 denotes epithelial
T319 20302-20306 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T320 20334-20338 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T321 20334-20338 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T322 20355-20362 http://purl.obolibrary.org/obo/UBERON_0001005 denotes airways
T323 20475-20482 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T324 20489-20494 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T325 20564-20567 http://purl.obolibrary.org/obo/CLO_0053438 denotes CD8
T326 20569-20576 http://purl.obolibrary.org/obo/CL_0000084 denotes T cells
T327 20580-20587 http://purl.obolibrary.org/obo/UBERON_0001005 denotes airways
T328 20614-20618 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T329 20637-20641 http://purl.obolibrary.org/obo/UBERON_0002048 denotes Lung
T330 20637-20641 http://www.ebi.ac.uk/efo/EFO_0000934 denotes Lung
T331 20665-20670 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T332 20741-20742 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T333 20814-20816 http://purl.obolibrary.org/obo/CLO_0050509 denotes 27
T334 21139-21144 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T335 21176-21180 http://purl.obolibrary.org/obo/OGG_0000000002 denotes gene
T336 21390-21397 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T337 21413-21414 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T338 21415-21420 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T339 21430-21435 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T340 21515-21522 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T341 21633-21634 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T342 21814-21815 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T343 21871-21875 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T344 21883-21893 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes Chiroptera
T345 22080-22083 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T346 22239-22243 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T347 22239-22243 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T348 22244-22249 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T349 22298-22299 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T350 22614-22615 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T351 22647-22660 http://purl.obolibrary.org/obo/PR_000029067 denotes human protein
T352 22720-22721 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T353 22763-22765 http://purl.obolibrary.org/obo/CLO_0001302 denotes 34
T354 23068-23072 http://purl.obolibrary.org/obo/OGG_0000000002 denotes gene
T355 23100-23102 http://purl.obolibrary.org/obo/CLO_0001000 denotes 35
T356 23178-23185 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T357 23216-23224 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membrane
T358 23238-23240 http://purl.obolibrary.org/obo/CLO_0001313 denotes 36
T359 23274-23282 http://purl.obolibrary.org/obo/CLO_0001658 denotes activity
T360 23394-23395 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T361 23666-23667 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T362 23680-23685 http://purl.obolibrary.org/obo/CLO_0007225 denotes label
T363 23773-23774 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T364 24094-24095 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T365 24342-24343 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T366 24521-24522 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T367 24890-24891 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T368 25149-25150 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T1 33-40 Chemical denotes Protein http://purl.obolibrary.org/obo/CHEBI_16541
T2 222-227 Chemical denotes drugs http://purl.obolibrary.org/obo/CHEBI_23888
T3 910-915 Chemical denotes drugs http://purl.obolibrary.org/obo/CHEBI_23888
T4 988-1001 Chemical denotes valproic acid http://purl.obolibrary.org/obo/CHEBI_39867
T5 997-1001 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T6 1065-1074 Chemical denotes antiviral http://purl.obolibrary.org/obo/CHEBI_22587
T7 1253-1262 Chemical denotes molecules http://purl.obolibrary.org/obo/CHEBI_25367
T8 2234-2239 Chemical denotes drugs http://purl.obolibrary.org/obo/CHEBI_23888
T9 2248-2259 Chemical denotes chloroquine http://purl.obolibrary.org/obo/CHEBI_3638
T10 2275-2293 Chemical denotes hydroxychloroquine http://purl.obolibrary.org/obo/CHEBI_5801
T11 2305-2321 Chemical denotes antiviral agents http://purl.obolibrary.org/obo/CHEBI_22587
T12 2660-2665 Chemical denotes drugs http://purl.obolibrary.org/obo/CHEBI_23888
T13 3165-3170 Chemical denotes drugs http://purl.obolibrary.org/obo/CHEBI_23888
T14 3255-3260 Chemical denotes drugs http://purl.obolibrary.org/obo/CHEBI_23888
T15 3418-3431 Chemical denotes valproic acid http://purl.obolibrary.org/obo/CHEBI_39867
T16 3427-3431 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T17 3468-3477 Chemical denotes antiviral http://purl.obolibrary.org/obo/CHEBI_22587
T18 5053-5055 Chemical denotes ID http://purl.obolibrary.org/obo/CHEBI_141439
T19 5564-5577 Chemical denotes glycoproteins http://purl.obolibrary.org/obo/CHEBI_17089
T20 6929-6936 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T21 7940-7950 Chemical denotes interferon http://purl.obolibrary.org/obo/CHEBI_52999
T22 7959-7966 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T23 7981-7991 Chemical denotes interferon http://purl.obolibrary.org/obo/CHEBI_52999
T24 8000-8007 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T25 8052-8062 Chemical denotes interferon http://purl.obolibrary.org/obo/CHEBI_52999
T26 8071-8078 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T27 8123-8133 Chemical denotes interferon http://purl.obolibrary.org/obo/CHEBI_52999
T28 8142-8149 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T29 8406-8413 Chemical denotes antigen http://purl.obolibrary.org/obo/CHEBI_59132
T30 8420-8426 Chemical denotes CXCL10 http://purl.obolibrary.org/obo/CHEBI_138157
T31 8440-8459 Chemical denotes chemokine ligand 10 http://purl.obolibrary.org/obo/CHEBI_138157
T32 8450-8456 Chemical denotes ligand http://purl.obolibrary.org/obo/CHEBI_52214
T33 8503-8513 Chemical denotes interferon http://purl.obolibrary.org/obo/CHEBI_52999
T34 8580-8590 Chemical denotes interferon http://purl.obolibrary.org/obo/CHEBI_52999
T35 8672-8675 Chemical denotes ADP http://purl.obolibrary.org/obo/CHEBI_16761|http://purl.obolibrary.org/obo/CHEBI_456216|http://purl.obolibrary.org/obo/CHEBI_73342
T38 8676-8682 Chemical denotes ribose http://purl.obolibrary.org/obo/CHEBI_33942|http://purl.obolibrary.org/obo/CHEBI_47013
T40 8723-8730 Chemical denotes radical http://purl.obolibrary.org/obo/CHEBI_26519
T41 8731-8752 Chemical denotes S-adenosyl methionine http://purl.obolibrary.org/obo/CHEBI_15414
T42 8733-8741 Chemical denotes adenosyl http://purl.obolibrary.org/obo/CHEBI_33505
T43 8742-8752 Chemical denotes methionine http://purl.obolibrary.org/obo/CHEBI_16811|http://purl.obolibrary.org/obo/CHEBI_64558
T45 8798-8805 Chemical denotes antigen http://purl.obolibrary.org/obo/CHEBI_59132
T46 8928-8935 Chemical denotes leucine http://purl.obolibrary.org/obo/CHEBI_25017
T47 9008-9014 Chemical denotes ligand http://purl.obolibrary.org/obo/CHEBI_52214
T48 9116-9123 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T49 9157-9167 Chemical denotes interferon http://purl.obolibrary.org/obo/CHEBI_52999
T50 9176-9183 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T51 9198-9208 Chemical denotes interferon http://purl.obolibrary.org/obo/CHEBI_52999
T52 9231-9238 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T53 9251-9261 Chemical denotes interferon http://purl.obolibrary.org/obo/CHEBI_52999
T54 9308-9311 Chemical denotes ADP http://purl.obolibrary.org/obo/CHEBI_16761|http://purl.obolibrary.org/obo/CHEBI_456216|http://purl.obolibrary.org/obo/CHEBI_73342
T57 9312-9318 Chemical denotes ribose http://purl.obolibrary.org/obo/CHEBI_33942|http://purl.obolibrary.org/obo/CHEBI_47013
T59 9409-9416 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T60 9438-9443 Chemical denotes alpha http://purl.obolibrary.org/obo/CHEBI_30216
T61 9504-9511 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T62 9533-9537 Chemical denotes zinc http://purl.obolibrary.org/obo/CHEBI_27363|http://purl.obolibrary.org/obo/CHEBI_30185
T64 9618-9621 Chemical denotes DNA http://purl.obolibrary.org/obo/CHEBI_16991
T65 9630-9637 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T66 9652-9656 Chemical denotes zinc http://purl.obolibrary.org/obo/CHEBI_27363|http://purl.obolibrary.org/obo/CHEBI_30185
T68 9686-9695 Chemical denotes antiviral http://purl.obolibrary.org/obo/CHEBI_22587
T69 11742-11745 Chemical denotes DNA http://purl.obolibrary.org/obo/CHEBI_16991
T70 11849-11852 Chemical denotes IFN http://purl.obolibrary.org/obo/CHEBI_52999
T71 11898-11908 Chemical denotes interferon http://purl.obolibrary.org/obo/CHEBI_52999
T72 11963-11972 Chemical denotes antiviral http://purl.obolibrary.org/obo/CHEBI_22587
T73 11986-11989 Chemical denotes IFN http://purl.obolibrary.org/obo/CHEBI_52999
T74 12029-12039 Chemical denotes interferon http://purl.obolibrary.org/obo/CHEBI_52999
T75 12064-12074 Chemical denotes interferon http://purl.obolibrary.org/obo/CHEBI_52999
T76 12075-12080 Chemical denotes alpha http://purl.obolibrary.org/obo/CHEBI_30216
T77 12739-12749 Chemical denotes interferon http://purl.obolibrary.org/obo/CHEBI_52999
T78 12939-12945 Chemical denotes CXCL10 http://purl.obolibrary.org/obo/CHEBI_138157
T79 13108-13114 Chemical denotes CXCL10 http://purl.obolibrary.org/obo/CHEBI_138157
T80 13301-13304 Chemical denotes IFN http://purl.obolibrary.org/obo/CHEBI_52999
T81 13471-13477 Chemical denotes CXCL10 http://purl.obolibrary.org/obo/CHEBI_138157
T82 13813-13823 Chemical denotes interferon http://purl.obolibrary.org/obo/CHEBI_52999
T83 13953-13959 Chemical denotes CXCL10 http://purl.obolibrary.org/obo/CHEBI_138157
T84 14041-14051 Chemical denotes interferon http://purl.obolibrary.org/obo/CHEBI_52999
T85 14052-14057 Chemical denotes alpha http://purl.obolibrary.org/obo/CHEBI_30216
T86 14162-14165 Chemical denotes DNA http://purl.obolibrary.org/obo/CHEBI_16991
T87 14211-14217 Chemical denotes CXCL10 http://purl.obolibrary.org/obo/CHEBI_138157
T88 14498-14504 Chemical denotes CXCL10 http://purl.obolibrary.org/obo/CHEBI_138157
T89 15996-16000 Chemical denotes Acid http://purl.obolibrary.org/obo/CHEBI_37527
T90 16135-16140 Chemical denotes drugs http://purl.obolibrary.org/obo/CHEBI_23888
T91 16253-16266 Chemical denotes valproic acid http://purl.obolibrary.org/obo/CHEBI_39867
T92 16262-16266 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T93 16268-16284 Chemical denotes carbon nanotubes http://purl.obolibrary.org/obo/CHEBI_50594
T94 16268-16274 Chemical denotes carbon http://purl.obolibrary.org/obo/CHEBI_27594|http://purl.obolibrary.org/obo/CHEBI_33415
T96 16286-16292 Chemical denotes nickel http://purl.obolibrary.org/obo/CHEBI_28112
T97 16298-16321 Chemical denotes tert-butylhydroperoxide http://purl.obolibrary.org/obo/CHEBI_64090
T98 16371-16385 Chemical denotes pirinixic acid http://purl.obolibrary.org/obo/CHEBI_32509
T99 16381-16385 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T100 16406-16423 Chemical denotes Ethinyl estradiol http://purl.obolibrary.org/obo/CHEBI_4903
T101 16414-16423 Chemical denotes estradiol http://purl.obolibrary.org/obo/CHEBI_23965
T102 16666-16668 Chemical denotes ID http://purl.obolibrary.org/obo/CHEBI_141439
T103 16771-16775 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T104 16804-16808 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T105 16884-16890 Chemical denotes carbon http://purl.obolibrary.org/obo/CHEBI_27594|http://purl.obolibrary.org/obo/CHEBI_33415
T107 16913-16919 Chemical denotes carbon http://purl.obolibrary.org/obo/CHEBI_27594|http://purl.obolibrary.org/obo/CHEBI_33415
T109 16991-16997 Chemical denotes Nickel http://purl.obolibrary.org/obo/CHEBI_28112
T110 17019-17025 Chemical denotes Nickel http://purl.obolibrary.org/obo/CHEBI_28112
T111 17133-17156 Chemical denotes tert-Butylhydroperoxide http://purl.obolibrary.org/obo/CHEBI_64090
T112 17231-17235 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T113 17268-17272 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T114 17337-17350 Chemical denotes Acetaminophen http://purl.obolibrary.org/obo/CHEBI_46195
T115 17371-17384 Chemical denotes Acetaminophen http://purl.obolibrary.org/obo/CHEBI_46195
T116 17449-17466 Chemical denotes Ethinyl estradiol http://purl.obolibrary.org/obo/CHEBI_4903
T117 17457-17466 Chemical denotes estradiol http://purl.obolibrary.org/obo/CHEBI_23965
T118 17494-17503 Chemical denotes Estradiol http://purl.obolibrary.org/obo/CHEBI_16469
T119 17602-17615 Chemical denotes valproic acid http://purl.obolibrary.org/obo/CHEBI_39867
T120 17611-17615 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T121 17847-17860 Chemical denotes valproic acid http://purl.obolibrary.org/obo/CHEBI_39867
T122 17856-17860 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T123 17990-17995 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433
T124 18138-18151 Chemical denotes valproic acid http://purl.obolibrary.org/obo/CHEBI_39867
T125 18147-18151 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T126 18165-18167 Chemical denotes VA http://purl.obolibrary.org/obo/CHEBI_75008
T127 18189-18191 Chemical denotes VA http://purl.obolibrary.org/obo/CHEBI_75008
T128 18192-18194 Chemical denotes NR http://purl.obolibrary.org/obo/CHEBI_145751
T129 18393-18403 Chemical denotes interferon http://purl.obolibrary.org/obo/CHEBI_52999
T130 18405-18408 Chemical denotes IFN http://purl.obolibrary.org/obo/CHEBI_52999
T131 18423-18432 Chemical denotes antiviral http://purl.obolibrary.org/obo/CHEBI_22587
T132 18448-18456 Chemical denotes effector http://purl.obolibrary.org/obo/CHEBI_35224
T133 18553-18563 Chemical denotes interferon http://purl.obolibrary.org/obo/CHEBI_52999
T134 18565-18568 Chemical denotes IFN http://purl.obolibrary.org/obo/CHEBI_52999
T135 18765-18768 Chemical denotes IFN http://purl.obolibrary.org/obo/CHEBI_52999
T136 18791-18793 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T138 18987-18990 Chemical denotes IFN http://purl.obolibrary.org/obo/CHEBI_52999
T139 19143-19146 Chemical denotes IFN http://purl.obolibrary.org/obo/CHEBI_52999
T140 19279-19289 Chemical denotes interferon http://purl.obolibrary.org/obo/CHEBI_52999
T141 19298-19305 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T142 19341-19348 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T143 19513-19521 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T144 21217-21226 Chemical denotes antiviral http://purl.obolibrary.org/obo/CHEBI_22587
T145 21286-21293 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T146 21633-21645 Chemical denotes a fatty acid http://purl.obolibrary.org/obo/CHEBI_28868
T147 21635-21645 Chemical denotes fatty acid http://purl.obolibrary.org/obo/CHEBI_35366
T148 21641-21645 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T149 21655-21663 Chemical denotes cysteine http://purl.obolibrary.org/obo/CHEBI_15356
T150 21690-21697 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T151 21713-21717 Chemical denotes zinc http://purl.obolibrary.org/obo/CHEBI_27363|http://purl.obolibrary.org/obo/CHEBI_30185
T153 21833-21842 Chemical denotes antiviral http://purl.obolibrary.org/obo/CHEBI_22587
T154 21843-21850 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T155 21967-21976 Chemical denotes antiviral http://purl.obolibrary.org/obo/CHEBI_22587
T156 22023-22030 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T157 22286-22296 Chemical denotes interferon http://purl.obolibrary.org/obo/CHEBI_52999
T158 22548-22561 Chemical denotes valproic acid http://purl.obolibrary.org/obo/CHEBI_39867
T159 22557-22561 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T160 22653-22660 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T161 22661-22668 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T162 22697-22710 Chemical denotes valproic acid http://purl.obolibrary.org/obo/CHEBI_39867
T163 22706-22710 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T164 22744-22748 Chemical denotes drug http://purl.obolibrary.org/obo/CHEBI_23888
T165 22849-22862 Chemical denotes valproic acid http://purl.obolibrary.org/obo/CHEBI_39867
T166 22858-22862 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T167 22950-22954 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T168 23023-23030 Chemical denotes histone http://purl.obolibrary.org/obo/CHEBI_15358
T169 23114-23118 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T170 23264-23273 Chemical denotes antiviral http://purl.obolibrary.org/obo/CHEBI_22587
T171 23286-23299 Chemical denotes valproic acid http://purl.obolibrary.org/obo/CHEBI_39867
T172 23295-23299 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T173 23309-23313 Chemical denotes drug http://purl.obolibrary.org/obo/CHEBI_23888
T174 23561-23570 Chemical denotes valproate http://purl.obolibrary.org/obo/CHEBI_60654
T175 23637-23640 Chemical denotes VPD http://purl.obolibrary.org/obo/CHEBI_74562
T176 23646-23658 Chemical denotes valnoctamide http://purl.obolibrary.org/obo/CHEBI_134767
T177 23660-23663 Chemical denotes VCD http://purl.obolibrary.org/obo/CHEBI_134767
T178 23680-23685 Chemical denotes label http://purl.obolibrary.org/obo/CHEBI_35209
T179 23741-23745 Chemical denotes Acid http://purl.obolibrary.org/obo/CHEBI_37527
T180 23902-23915 Chemical denotes valproic acid http://purl.obolibrary.org/obo/CHEBI_39867
T181 23911-23915 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T182 24405-24410 Chemical denotes drugs http://purl.obolibrary.org/obo/CHEBI_23888
T183 24636-24641 Chemical denotes drugs http://purl.obolibrary.org/obo/CHEBI_23888

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T1 3572-3587 http://purl.obolibrary.org/obo/GO_0010467 denotes Gene Expression
T2 3655-3670 http://purl.obolibrary.org/obo/GO_0010467 denotes gene expression
T3 4587-4603 http://purl.obolibrary.org/obo/GO_0010467 denotes genes expression
T4 4954-4969 http://purl.obolibrary.org/obo/GO_0010467 denotes Gene Expression
T5 5089-5112 http://purl.obolibrary.org/obo/GO_0045087 denotes innate immune responses
T6 5220-5243 http://purl.obolibrary.org/obo/GO_0045087 denotes innate immune responses
T7 5422-5434 http://purl.obolibrary.org/obo/GO_0009405 denotes pathogenesis
T8 6963-6975 http://purl.obolibrary.org/obo/GO_0009405 denotes pathogenesis
T9 8852-8865 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T10 8952-8972 http://purl.obolibrary.org/obo/GO_0000981 denotes transcription factor
T11 8952-8965 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T12 9397-9408 http://purl.obolibrary.org/obo/GO_0006810 denotes transporter
T13 11579-11594 http://purl.obolibrary.org/obo/GO_0006955 denotes Immune Response
T14 11669-11692 http://purl.obolibrary.org/obo/GO_0045087 denotes innate immune responses
T15 11763-11799 http://purl.obolibrary.org/obo/GO_0002224 denotes Toll-like receptor signaling pathway
T16 11782-11799 http://purl.obolibrary.org/obo/GO_0007165 denotes signaling pathway
T17 11782-11791 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T18 11805-11835 http://purl.obolibrary.org/obo/GO_0051100 denotes negative regulation of binding
T19 11814-11835 http://purl.obolibrary.org/obo/GO_0051098 denotes regulation of binding
T20 11814-11824 http://purl.obolibrary.org/obo/GO_0065007 denotes regulation
T21 11866-11882 http://purl.obolibrary.org/obo/GO_0016032 denotes viral infections
T22 11891-11926 http://purl.obolibrary.org/obo/GO_0060337 denotes type I interferon signaling pathway
T23 11909-11926 http://purl.obolibrary.org/obo/GO_0007165 denotes signaling pathway
T24 11909-11918 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T25 11928-11957 http://purl.obolibrary.org/obo/GO_0051607 denotes defense response to the virus
T26 11928-11944 http://purl.obolibrary.org/obo/GO_0006952 denotes defense response
T27 12008-12050 http://purl.obolibrary.org/obo/GO_0032479 denotes regulation of type I interferon production
T28 12008-12018 http://purl.obolibrary.org/obo/GO_0065007 denotes regulation
T29 12022-12050 http://purl.obolibrary.org/obo/GO_0032606 denotes type I interferon production
T30 12029-12050 http://purl.obolibrary.org/obo/GO_0001816 denotes interferon production
T31 12052-12080 http://purl.obolibrary.org/obo/GO_0035455 denotes response to interferon-alpha
T32 12086-12125 http://purl.obolibrary.org/obo/GO_0050688 denotes regulation of defense response to virus
T33 12086-12116 http://purl.obolibrary.org/obo/GO_0031347 denotes regulation of defense response
T34 12086-12096 http://purl.obolibrary.org/obo/GO_0065007 denotes regulation
T35 12100-12116 http://purl.obolibrary.org/obo/GO_0006952 denotes defense response
T36 12237-12280 http://purl.obolibrary.org/obo/GO_0060759 denotes regulation of response to cytokine stimulus
T37 12237-12247 http://purl.obolibrary.org/obo/GO_0065007 denotes regulation
T38 12251-12280 http://purl.obolibrary.org/obo/GO_0034097 denotes response to cytokine stimulus
T39 12282-12320 http://purl.obolibrary.org/obo/GO_0050777 denotes negative regulation of immune response
T40 12291-12320 http://purl.obolibrary.org/obo/GO_0050776 denotes regulation of immune response
T41 12291-12301 http://purl.obolibrary.org/obo/GO_0065007 denotes regulation
T42 12305-12320 http://purl.obolibrary.org/obo/GO_0006955 denotes immune response
T43 12322-12346 http://purl.obolibrary.org/obo/GO_0002262 denotes myeloid cell homeostasis
T44 12335-12346 http://purl.obolibrary.org/obo/GO_0042592 denotes homeostasis
T45 12361-12401 http://purl.obolibrary.org/obo/GO_0043900 denotes regulation of the multi-organism process
T46 12361-12371 http://purl.obolibrary.org/obo/GO_0065007 denotes regulation
T47 12379-12401 http://purl.obolibrary.org/obo/GO_0051704 denotes multi-organism process
T48 12732-12767 http://purl.obolibrary.org/obo/GO_0060337 denotes Type I interferon signaling pathway
T49 12750-12767 http://purl.obolibrary.org/obo/GO_0007165 denotes signaling pathway
T50 12750-12759 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T51 13022-13047 http://purl.obolibrary.org/obo/GO_0051607 denotes Defense response to virus
T52 13030-13047 http://purl.obolibrary.org/obo/GO_0009615 denotes response to virus
T53 13617-13660 http://purl.obolibrary.org/obo/GO_0060759 denotes Regulation of response to cytokine stimulus
T54 13631-13660 http://purl.obolibrary.org/obo/GO_0034097 denotes response to cytokine stimulus
T55 13792-13834 http://purl.obolibrary.org/obo/GO_0032479 denotes Regulation of type I interferon production
T56 13806-13834 http://purl.obolibrary.org/obo/GO_0032606 denotes type I interferon production
T57 13813-13834 http://purl.obolibrary.org/obo/GO_0001816 denotes interferon production
T58 14029-14057 http://purl.obolibrary.org/obo/GO_0035455 denotes Response to interferon-alpha
T59 14289-14328 http://purl.obolibrary.org/obo/GO_0050688 denotes Regulation of defense response to virus
T60 14303-14328 http://purl.obolibrary.org/obo/GO_0051607 denotes defense response to virus
T61 14303-14319 http://purl.obolibrary.org/obo/GO_0006952 denotes defense response
T62 14430-14466 http://purl.obolibrary.org/obo/GO_0002224 denotes Toll-like receptor signaling pathway
T63 14449-14466 http://purl.obolibrary.org/obo/GO_0007165 denotes signaling pathway
T64 14449-14458 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T65 14611-14649 http://purl.obolibrary.org/obo/GO_0050777 denotes negative regulation of immune response
T66 14620-14649 http://purl.obolibrary.org/obo/GO_0050776 denotes regulation of immune response
T67 14620-14630 http://purl.obolibrary.org/obo/GO_0065007 denotes regulation
T68 14634-14649 http://purl.obolibrary.org/obo/GO_0006955 denotes immune response
T69 14741-14765 http://purl.obolibrary.org/obo/GO_0002262 denotes Myeloid cell homeostasis
T70 14754-14765 http://purl.obolibrary.org/obo/GO_0042592 denotes homeostasis
T71 14860-14890 http://purl.obolibrary.org/obo/GO_0051100 denotes Negative regulation of binding
T72 14869-14890 http://purl.obolibrary.org/obo/GO_0051098 denotes regulation of binding
T73 14869-14879 http://purl.obolibrary.org/obo/GO_0065007 denotes regulation
T74 14981-15026 http://purl.obolibrary.org/obo/GO_0043902 denotes Positive regulation of multi-organism process
T75 14990-15026 http://purl.obolibrary.org/obo/GO_0043900 denotes regulation of multi-organism process
T76 14990-15000 http://purl.obolibrary.org/obo/GO_0065007 denotes regulation
T77 15004-15026 http://purl.obolibrary.org/obo/GO_0051704 denotes multi-organism process
T78 15192-15208 http://purl.obolibrary.org/obo/GO_0010467 denotes genes expression
T79 15820-15835 http://purl.obolibrary.org/obo/GO_0010467 denotes Gene expression
T80 18074-18089 http://purl.obolibrary.org/obo/GO_0010467 denotes gene expression
T81 18359-18372 http://purl.obolibrary.org/obo/GO_0045087 denotes innate immune
T82 18572-18581 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T83 18892-18913 http://purl.obolibrary.org/obo/GO_0006954 denotes inflammatory response
T84 19547-19560 http://purl.obolibrary.org/obo/GO_0045087 denotes innate immune
T85 19776-19791 http://purl.obolibrary.org/obo/GO_0061025 denotes membrane fusion
T86 20412-20428 http://purl.obolibrary.org/obo/GO_0016032 denotes viral infections
T87 20464-20471 http://purl.obolibrary.org/obo/GO_0009606 denotes tropism
T88 21932-21948 http://purl.obolibrary.org/obo/GO_0016032 denotes viral infections
T89 22096-22111 http://purl.obolibrary.org/obo/GO_0016032 denotes viral infection
T90 23068-23083 http://purl.obolibrary.org/obo/GO_0010467 denotes gene expression

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T1 0-120 Sentence denotes Interferon-Induced Transmembrane Protein (IFITM3) Is Upregulated Explicitly in SARS-CoV-2 Infected Lung Epithelial Cells
T2 122-130 Sentence denotes Abstract
T3 131-228 Sentence denotes Current guidelines for COVID-19 management recommend the utilization of various repurposed drugs.
T4 229-412 Sentence denotes Despite ongoing research toward the development of a vaccine against SARS-CoV-2, such a vaccine will not be available in time to contribute to the containment of the ongoing pandemic.
T5 413-562 Sentence denotes Therefore, there is an urgent need to develop a framework for the rapid identification of novel targets for diagnostic and therapeutic interventions.
T6 563-791 Sentence denotes We analyzed publicly available transcriptomic datasets of SARS-CoV infected humans and mammals to identify consistent differentially expressed genes then validated in SARS-CoV-2 infected epithelial cells transcriptomic datasets.
T7 792-932 Sentence denotes Comprehensive toxicogenomic analysis of the identified genes to identify possible interactions with clinically proven drugs was carried out.
T8 933-1082 Sentence denotes We identified IFITM3 as an early upregulated gene, and valproic acid was found to enhance its mRNA expression as well as induce its antiviral action.
T9 1083-1367 Sentence denotes These findings indicate that analysis of publicly available transcriptomic and toxicogenomic data represents a rapid approach for the identification of novel targets and molecules that can modify the action of such targets during the early phases of emerging infections like COVID-19.
T10 1369-1381 Sentence denotes Introduction
T11 1382-1474 Sentence denotes Coronaviruses are a large family of viruses that were first described over 50 years ago (1).
T12 1475-1626 Sentence denotes Since the turn of the millennium, there have been two major global outbreaks caused by coronaviruses, namely SARS-CoV in 2003 and MERS-CoV in 2012 (2).
T13 1627-1739 Sentence denotes The ongoing COVID-19 pandemic caused by SARS-CoV-2 represents the third and most devastating of these outbreaks.
T14 1740-1864 Sentence denotes These outbreaks, notably the COVID-19 pandemic, are harsh reminders of the challenges posed by emerging infectious diseases.
T15 1865-1997 Sentence denotes The global impact of the COVID-19 pandemic has brought to the forefront the need to rapidly develop and deploy an effective vaccine.
T16 1998-2173 Sentence denotes However, despite ongoing concerted research efforts, it is accepted that such a vaccine will not be available in time to contribute to the containment of the ongoing pandemic.
T17 2174-2326 Sentence denotes Current management guidelines include the use of repurposed drugs such as chloroquine and its analog hydroxychloroquine as well as antiviral agents (3).
T18 2327-2434 Sentence denotes However, the need for well-designed clinical trials to validate their efficacy continues to be highlighted.
T19 2435-2724 Sentence denotes To effectively address the ongoing COVID-19 pandemic, there is a recognized need for a framework for rapid identification of novel targets for diagnostic and therapeutic interventions as well as determine clinically approved drugs with high potential for repurposed use against SARS-CoV-2.
T20 2725-3029 Sentence denotes Publicly available transcriptomic datasets generated from SARS-CoV infected humans, and mammalian cells represent a wealth of data that could be used to identify consistent differentially expressed genes, which could then be validated against SARS-CoV-2 infected epithelial cells transcriptomic datasets.
T21 3030-3171 Sentence denotes A comprehensive toxicogenomic analysis of the identified genes could potentially identify possible interactions with clinically proven drugs.
T22 3172-3284 Sentence denotes This simple approach can be used for the rapid identification of novel targets and drugs for further validation.
T23 3285-3485 Sentence denotes In this study, we have applied this approach, and our findings have identified IFITM3 as an early upregulated gene and indicate that valproic acid enhances IFITM3 mRNA expression and antiviral action.
T24 3487-3508 Sentence denotes Materials and Methods
T25 3509-3638 Sentence denotes Publicly available transcriptomic datasets were retrieved from Gene Expression Omnibus (GEO) (https://www.ncbi.nlm.nih.gov/geo/).
T26 3639-3801 Sentence denotes Only microarray gene expression datasets with the word “SARS-COV,” virus, or modified strain infected vs. mock-infected and no more than 48 h after the infection.
T27 3802-3865 Sentence denotes Twelve datasets fulfilled the criteria, as detailed in Table 1.
T28 3866-3949 Sentence denotes We used GEOquery and limma R packages through the GEO2R tool for each dataset (12).
T29 3950-4112 Sentence denotes After sorting the genes according to the False Discovery Rate (FDR), the top 2,000 differentially expressed probes with FDR <0.05 were selected from each dataset.
T30 4113-4253 Sentence denotes The annotated genes of the 5,000 probes in each dataset were intersected with differentially expressed genes (DEGs) from all other datasets.
T31 4254-4421 Sentence denotes The DEGs that were common in at least 9 out of the 12 (75%) datasets were identified as shared genes that are consistently DEG in the first 48 h of SARS-COV infection.
T32 4422-4570 Sentence denotes Enriched Ontology Clustering for the identified genes was performed to explore using the Metascape (http://metascape.org/gp/index.html#/main/step1).
T33 4571-4877 Sentence denotes The shortlisted genes expression was then explored in another dataset (GSE147507), where RNA-Sequencing of primary human lung epithelium (NHBE) mock-treated or infected with SARS-CoV-2 was done to examine whether there is a difference in the response of SARS-CoV-2 from other strains in terms of DEGs (13).
T34 4878-5006 Sentence denotes Table 1 List of publicly available transcriptomics datasets retrieved from Gene Expression Omnibus (GEO) and used in the study.
T35 5007-5010 Sentence denotes No.
T36 5013-5068 Sentence denotes Study title Model Strain Gene set ID References
T37 5069-5071 Sentence denotes 1.
T38 5073-5207 Sentence denotes Absence of host innate immune responses in SARS-CoV-infected ferrets upon subsequent challenge Ferret SARS-CoV (TOR2) GSE11704 (4)
T39 5208-5210 Sentence denotes 2.
T40 5212-5405 Sentence denotes Dynamic innate immune responses of human bronchial epithelial cells against SARS-CoV and DOHV infection 2B4 cells, a clonal derivative of Calu-3 cells Urbani strain of SARS-CoV GSE17400 (5)
T41 5406-5408 Sentence denotes 3.
T42 5410-5622 Sentence denotes Comparative pathogenesis of three human and zoonotic SARS-CoV strains in cynomolgus macaques Cynomolgus macaques Recombinant SARS-CoV bearing variant S glycoproteins (Urbani, GZ02 and HC/SZ/6103) GSE23955 (6)
T43 5623-5625 Sentence denotes 4.
T44 5627-5744 Sentence denotes SM001: SARS CoV MA15 infection of C57Bl/6 mouse model – data from 4 viral doses at 1, 2, 4 and 7 days post infection.
T45 5746-5788 Sentence denotes C57BL/6 mice SARS CoV MA15 GSE33266 (7)
T46 5789-5791 Sentence denotes 5.
T47 5793-5980 Sentence denotes SCL005: icSARS CoV Urbani or icSARS deltaORF6 infections of the 2B4 clonal derivative of Calu-3 cells - Time course Calu-3 cells icSARS CoV or the icSARS deltaORF6 mutant GSE33267 (8)
T48 5981-5983 Sentence denotes 6.
T49 5985-6293 Sentence denotes SCL006,icSARS CoV urbani or icSARS Bat SRBD (spike receptor binding domain from the wild type strain urbani to allow for infection of human and non-human primate cells) infections of the 2B4 clonal derivative of calu-3 cells - Time course Calu-3 cells icSARS CoV or the cSARS Bat SRBD strain GSE37827 (8)
T50 6294-6296 Sentence denotes 7.
T51 6298-6371 Sentence denotes SHAE002: SARS-CoV, SARS-dORF6 and SARS-BatSRBD infection of HAE cultures.
T52 6373-6438 Sentence denotes HAE cultures SARS-CoV, SARS-dORF6 or SARS-BatSRBD GSE47960 (9)
T53 6439-6441 Sentence denotes 8.
T54 6443-6677 Sentence denotes SCL008: icSARS CoV, icSARS-deltaNSP16 or icSARS ExoNI infections of the 2B4 clonal derivative of Calu-3 cells - Time course 2B-4 cells (clonal derivatives of Calu-3 cells) icSARS CoV, icSARS deltaNSP16 or icSARS ExoNI GSE48142 (8)
T55 6678-6680 Sentence denotes 9.
T56 6682-6880 Sentence denotes SM003 - icSARS CoV, SARS MA15 wild type and SARS BatSRBD mutant virus infections of C57BL6 mice - A time course C57BL6 icSARS CoV, Wild Type SARS MA15 or SARS BatSRBD mutant viruses GSE50000 (8)
T57 6881-6884 Sentence denotes 10.
T58 6886-7018 Sentence denotes The PDZ-binding motif of SARS-CoV envelope protein is a determinant of viral pathogenesis BALB/c Ola Hsd mice MA15 GSE52920 (10)
T59 7019-7022 Sentence denotes 11.
T60 7024-7138 Sentence denotes Genome wide identification of SARS-CoV susceptibility loci using the collaborative cross C57BL/6J MA15 GSE64660
T61 7139-7142 Sentence denotes 12.
T62 7144-7300 Sentence denotes Mouse lung tissue transcriptome response to a mouse-adapted strain of SARS-CoV in wild type C57BL6/NJ mice and TLR3-/- mice C57BL6/NJ MA15 GSE68820 (11)
T63 7302-7309 Sentence denotes Results
T64 7310-7443 Sentence denotes In total, 9,692 genes were differentially expressed genes (DEGs) between mock-infected and virally infected models in the 12 studies.
T65 7444-7616 Sentence denotes Thirty-eight genes that were DEGs in at least 9 out of 12 studies (75%) were considered common DEGs due to SARS-COV infection of the lungs in the first 48 h post-infection.
T66 7617-7651 Sentence denotes These genes are listed in Table 2.
T67 7652-7826 Sentence denotes Table 2 Genes symbols and description for the common DEGs in 9 out of the 12 transcriptomics datasets due to SARS-CoV infection of the lung in the first 48 h post-infection.
T68 7827-7898 Sentence denotes Genes symbol Description Number of studies where DEG was identified
T69 7899-7932 Sentence denotes DDX58 DExD/H-box helicase 58 11
T70 7933-7973 Sentence denotes IFI44 interferon induced protein 44 11
T71 7974-8044 Sentence denotes IFIT1 interferon induced protein with tetratricopeptide repeats 1 11
T72 8045-8115 Sentence denotes IFIT2 interferon induced protein with tetratricopeptide repeats 2 11
T73 8116-8186 Sentence denotes IFIT3 interferon induced protein with tetratricopeptide repeats 3 11
T74 8187-8227 Sentence denotes ISG15 ISG15 ubiquitin like modifier 11
T75 8228-8261 Sentence denotes MX1 MX dynamin like GTPase 1 11
T76 8262-8295 Sentence denotes MX2 MX dynamin like GTPase 2 11
T77 8296-8339 Sentence denotes OAS3 2′-5′-oligoadenylate synthetase 3 11
T78 8340-8374 Sentence denotes XAF1 XIAP associated factor 1 11
T79 8375-8419 Sentence denotes BST2 bone marrow stromal cell antigen 2 10
T80 8420-8463 Sentence denotes CXCL10 C-X-C motif chemokine ligand 10 10
T81 8464-8495 Sentence denotes DHX58 DExH-box helicase 58 10
T82 8496-8550 Sentence denotes IFIH1 interferon induced with helicase C domain 1 10
T83 8551-8573 Sentence denotes IL6 interleukin 6 10
T84 8574-8614 Sentence denotes IRF7 interferon regulatory factor 7 10
T85 8615-8658 Sentence denotes OAS2 2′-5′-oligoadenylate synthetase 2 10
T86 8659-8715 Sentence denotes PARP14 poly(ADP-ribose) polymerase family member 14 10
T87 8716-8776 Sentence denotes RSAD2 radical S-adenosyl methionine domain containing 2 10
T88 8777-8809 Sentence denotes SP100 SP100 nuclear antigen 10
T89 8810-8871 Sentence denotes STAT1 signal transducer and activator of transcription 1 10
T90 8872-8914 Sentence denotes USP18 ubiquitin specific peptidase 18 10
T91 8915-8977 Sentence denotes BATF2 basic leucine zipper ATF-like transcription factor 2 9
T92 8978-9020 Sentence denotes CXCL11 C-X-C motif chemokine ligand 11 9
T93 9021-9064 Sentence denotes EPSTI1 epithelial stromal interaction 1 9
T94 9065-9149 Sentence denotes HERC6 HECT and RLD domain containing E3 ubiquitin protein ligase family member 6 9
T95 9150-9189 Sentence denotes IFI35 interferon induced protein 35 9
T96 9190-9243 Sentence denotes IFITM3 interferon induced transmembrane protein 3 9
T97 9244-9295 Sentence denotes ISG20 interferon stimulated exonuclease gene 20 9
T98 9296-9349 Sentence denotes PARP9 poly(ADP-ribose) polymerase family member 9 9
T99 9350-9381 Sentence denotes PLAC8 placenta associated 8 9
T100 9382-9421 Sentence denotes RTP4 receptor transporter protein 4 9
T101 9422-9477 Sentence denotes SAMD9L sterile alpha motif domain containing 9 like 9
T102 9478-9514 Sentence denotes SP110 SP110 nuclear body protein 9
T103 9515-9567 Sentence denotes TRAFD1 TRAF-type zinc finger domain containing 1 9
T104 9568-9609 Sentence denotes TRIM21 tripartite motif containing 21 9
T105 9610-9642 Sentence denotes ZBP1 Z-DNA binding protein 1 9
T106 9643-9700 Sentence denotes ZC3HAV1 zinc finger CCCH-type containing, antiviral 1 9
T107 9702-9749 Sentence denotes Species-Specific Response to SARS-CoV Infection
T108 9750-9934 Sentence denotes In order to identify DEG in SARS-CoV infected lung tissue-specific to each of the models used and those which are shared, we intersected the DEGs from datasets that use the same model.
T109 9935-10240 Sentence denotes Human epithelial cells datasets (GSE17400, GSE33267, GSE37827, GSE47960, and GSE48142), mice datasets (GSE33266, GSE50000, GSE52920, GSE64660, and GSE68820), Ferret (GSE11704) and Cynomolgus macaques (GSE23955) were all intersected with the COVID-19 infected epithelial cells dataset as shown in Figure 1.
T110 10241-10322 Sentence denotes The number of DEG intersected between different species is listed in the Table 3.
T111 10323-10489 Sentence denotes Epithelial cells infected with SARS-CoV-2 shared 9 DEGs (MX1, OAS3, XAF1, IFI44, MX2, IRF7, STAT1, IFIT3, and IFIT1) with Human Lung Cells, Mice, and Cynomolgus maca.
T112 10490-10630 Sentence denotes Figure 1 Common DEGs among mammals and human cells infected with SARS-CoV virus extracted from publicly available transcriptomics datasets.
T113 10631-10764 Sentence denotes Table 3 Number of shared DEGs in different models infected with SARS-CoV extracted from publicly available transcriptomics datasets.
T114 10765-10796 Sentence denotes Model infected Number of DEGs
T115 10797-10812 Sentence denotes [COVID-19] 271
T116 10813-10849 Sentence denotes [COVID-19] and [Cynomolgus maca] 16
T117 10850-10877 Sentence denotes [COVID-19] and [Ferret] 28
T118 10878-10926 Sentence denotes [COVID-19] and [Ferret] and [Cynomolgus maca] 1
T119 10927-10962 Sentence denotes [COVID-19] and [Human lung cell] 1
T120 10963-11020 Sentence denotes [COVID-19] and [Human lung cell] and [Cynomolgus maca] 3
T121 11021-11067 Sentence denotes [COVID-19] and [Human lung cell] and [Mice] 1
T122 11068-11136 Sentence denotes [COVID-19] and [Human lung cell] and [Mice] and [Cynomolgus maca] 9
T123 11137-11161 Sentence denotes [COVID-19] and [Mice] 2
T124 11162-11208 Sentence denotes [COVID-19] and [Mice] and [Cynomolgus maca] 3
T125 11209-11246 Sentence denotes [COVID-19] and [Mice] and [Ferret] 1
T126 11247-11269 Sentence denotes [Cynomolgus maca] 688
T127 11270-11285 Sentence denotes [Ferret] 1,522
T128 11286-11320 Sentence denotes [Ferret] and [Cynomolgus maca] 61
T129 11321-11341 Sentence denotes [Human lung cell] 2
T130 11342-11384 Sentence denotes [Human lung cell] and [Cynomolgus maca] 4
T131 11385-11416 Sentence denotes [Human lung cell] and [Mice] 4
T132 11417-11470 Sentence denotes [Human lung cell] and [Mice] and [Cynomolgus maca] 4
T133 11471-11481 Sentence denotes [Mice] 49
T134 11482-11513 Sentence denotes [Mice] and [Cynomolgus maca] 8
T135 11514-11536 Sentence denotes [Mice] and [Ferret] 2
T136 11538-11614 Sentence denotes The Identified Genes Are Involved in the Immune Response Against RNA Viruses
T137 11615-11713 Sentence denotes As expected, the top genes identified are involved in innate immune responses against RNA viruses.
T138 11714-11836 Sentence denotes These include the cytosolic DNA-sensing pathway, Toll-like receptor signaling pathway, and negative regulation of binding.
T139 11837-12165 Sentence denotes Interferon (IFN) response to viral infections such as type I interferon signaling pathway, defense response to the virus, the antiviral mechanism by IFN-stimulated genes, regulation of type I interferon production, response to interferon-alpha, and regulation of defense response to virus and Influenza A, were also upregulated.
T140 12166-12446 Sentence denotes Genes that play significant roles in activating immune systems such as regulation of response to cytokine stimulus, negative regulation of immune response, myeloid cell homeostasis, and positive regulation of the multi-organism process are also upregulated (Figure 2 and Table 4).
T141 12447-12513 Sentence denotes Figure 2 Enriched Ontology Clustering for the 38 identified DEGs.
T142 12514-12615 Sentence denotes Table 4 Enriched Ontology Clustering for the 38 DEGs identified with Genes symbols in each category.
T143 12616-12694 Sentence denotes Category Term Description LogP Log (q-value) InTerm_InList Symbols
T144 12695-12984 Sentence denotes GO biological processes GO:0060337 Type I interferon signaling pathway −36.0121 −31.994 19/95 BST2, IFI35, IFIT2, IFIT1, IFIT3, IRF7, ISG20, MX1, MX2, OAS2, OAS3, SP100, STAT1, ISG15, IFITM3, USP18, XAF1, ZBP1, RSAD2, TRIM21, DDX58, IL6, CXCL10, CXCL11, PARP14, PARP9, ZC3HAV1, DHX58
T145 12985-13242 Sentence denotes GO biological processes GO:0051607 Defense response to virus −33.8766 −30.160 22/248 BST2, IFIT2, IFIT1, IFIT3, IL6, CXCL10, IRF7, ISG20, MX1, MX2, OAS2, OAS3, STAT1, ISG15, IFITM3, DDX58, ZC3HAV1, RTP4, IFIH1, DHX58, PARP9, RSAD2, IFI44, PLAC8, BATF2
T146 13243-13402 Sentence denotes Reactome gene sets R-HSA-1169410 Antiviral mechanism by IFN-stimulated genes −14.292 −11.274 9/81 IFIT1, MX1, MX2, OAS2, OAS3, STAT1, ISG15, USP18, DDX58
T147 13403-13579 Sentence denotes KEGG pathway hsa05164 Influenza A −12.9643 −9.967 10/173 IL6, CXCL10, IRF7, MX1, OAS2, OAS3, STAT1, DDX58, IFIH1, RSAD2, BST2, SP100, TRIM21, IFITM3, PARP14, PARP9, IFIT1
T148 13580-13754 Sentence denotes GO biological processes GO:0060759 Regulation of response to cytokine stimulus −10.9357 −8.032 9/188 IL6, IRF7, STAT1, USP18, DDX58, PARP14, IFIH1, ZBP1, PARP9, ZC3HAV1
T149 13755-13991 Sentence denotes GO biological processes GO:0032479 Regulation of type I interferon production −10.6988 −7.826 8/127 IRF7, TRIM21, STAT1, ISG15, DDX58, IFIH1, DHX58, ZBP1, TRAFD1, USP18, PARP14, PARP9, RSAD2, CXCL10, BST2, IL6, IFIT1, SP100, BATF2
T150 13992-14127 Sentence denotes GO biological processes GO:0035455 Response to interferon-alpha −9.83448 −7.021 5/21 BST2, IFIT2, IFIT3, MX2, IFITM3, STAT1, XAF1
T151 14128-14251 Sentence denotes KEGG pathway hsa04623 Cytosolic DNA-sensing pathway −7.31693 –.600 5/63 IL6, CXCL10, IRF7, DDX58, ZBP1, USP18, TRIM21
T152 14252-14405 Sentence denotes GO biological processes GO:0050688 Regulation of defense response to virus −6.93272 −4.247 5/75 IFIT1, STAT1, DDX58, DHX58, PARP9, BST2, IL6, RSAD2
T153 14406-14573 Sentence denotes KEGG pathway hsa04620 Toll-like receptor signaling pathway −6.22049 −3.626 5/104 IL6, CXCL10, IRF7, CXCL11, STAT1, OAS2, ISG15, IFI44, PLAC8, HERC6, DHX58, SP100
T154 14574-14703 Sentence denotes GO biological processes GO:0050777 negative regulation of immune response −3.98249 −1.608 4/156 BST2, TRAFD1, PARP14, DHX58
T155 14704-14822 Sentence denotes GO biological processes GO:0002262 Myeloid cell homeostasis −2.78923 −0.508 3/148 IL6, STAT1, ISG15, IRF7, BATF2
T156 14823-14943 Sentence denotes GO biological processes GO:0051100 Negative regulation of binding −2.61062 −0.352 3/171 IFIT2, IFIT1, SP100, PARP9
T157 14944-15081 Sentence denotes GO biological processes GO:0043902 Positive regulation of multi-organism process −2.50748 −0.264 3/186 IFIT1, TRIM21, DHX58, IFITM3
T158 15083-15176 Sentence denotes IFITM3, OAS2, and MX1 Showed the Highest Upregulation in SARS-CoV-2 Infected Epithelial Cells
T159 15177-15326 Sentence denotes The identified genes expression levels were higher in human bronchial epithelium infected with SARS-CoV-2 compared to those mock-infected (Figure 3).
T160 15327-15597 Sentence denotes However, only IFITM3 showed a significant difference (p < 0.05), while two other genes OAS2 and MX1 showed a trend of enhancement, although it was not statistically significant (p = 0.06 using the two-stage linear step-up procedure of Benjamini, Krieger, and Yekutieli).
T161 15598-15809 Sentence denotes IFITM3 mRNA levels were one of the highly expressed genes compared to the other identified genes at baseline in mock-infected HBE and were further induced by the virus, which results in overall high mRNA levels.
T162 15810-15985 Sentence denotes Figure 3 Gene expression of the shortlisted genes in healthy epithelium infected with SARS-CoV-2 compared to mock-infected cells from the transcriptomics dataset (GSE147507).
T163 15987-16042 Sentence denotes Valproic Acid Can Upregulate the IFITM3 mRNA Expression
T164 16043-16238 Sentence denotes Next, we searched the Comparative Toxicogenomics Database (http://ctdbase.org/) to identify drugs/chemicals that might affect the mRNA expression of IFITM3 in at least two reference studies (14).
T165 16239-16463 Sentence denotes Interestingly valproic acid, carbon nanotubes, nickel, and tert-butylhydroperoxide were shown to upregulate IFITM3 expression while pirinixic acid, acetaminophen, and Ethinyl estradiol decreased such an expression (Table 5).
T166 16464-16640 Sentence denotes Table 5 Chemicals shown to upregulate or downregulate IFITM3 mRNA expression in at least two studies as shown in the Comparative Toxicogenomics Database (http://ctdbase.org/).
T167 16641-16761 Sentence denotes Chemical name Chemical ID CAS RN Interaction Effect on IFITM3 mRNA expression Reference count Organism count
T168 16762-16872 Sentence denotes Valproic acid D014635 99-66-1 Valproic acid results in increased expression of IFITM3 mRNA increases 3 2
T169 16873-16990 Sentence denotes Nanotubes, carbon D037742 Nanotubes, carbon analog results in increased expression of IFITM3 mRNA increases 2 1
T170 16991-17089 Sentence denotes Nickel D009532 7440-02-0 Nickel results in increased expression of IFITM3 mRNA increases 2 1
T171 17090-17220 Sentence denotes Tert-butylhydroperoxide D020122 75-91-2 tert-Butylhydroperoxide results in increased expression of IFITM3 mRNA increases 2 1
T172 17221-17336 Sentence denotes Pirinixic acid C006253 50892-23-4 Pirinixic acid results in decreased expression of IFITM3 mRNA decreases 3 2
T173 17337-17448 Sentence denotes Acetaminophen D000082 103-90-2 Acetaminophen results in decreased expression of IFITM3 mRNA decreases 2 1
T174 17449-17770 Sentence denotes Ethinyl estradiol D004997 57-63-6 Ethinyl Estradiol results in decreased expression of IFITM3 mRNA decreases 2 2 In order to examine the effect of valproic acid therapy on the IFITM3 mRNA expression in immune cells of the blood, a publicly available transcriptomics dataset (GSE143272) was extracted and reanalyzed.
T175 17771-17869 Sentence denotes Healthy controls were compared to responders and non-responders patients on valproic acid therapy.
T176 17870-18052 Sentence denotes We found upregulation of the mRNA expression of IFITM3 in patients, and the difference was significant in the responder group only (p < 0.05) compared to healthy controls (Figure 4).
T177 18053-18283 Sentence denotes Figure 4 Normalized gene expression of IFITM3 in the blood of patients on responder valproic acid monotherapy (VA R) and non-response (VA NR) compared to healthy controls (H) extracted from the transcriptomic dataset (GSE143272).
T178 18285-18295 Sentence denotes Discussion
T179 18296-18489 Sentence denotes In response to viral RNAs, like in the case of SARS-CoV-2, the innate immune system will unleash interferon (IFN), to activate antiviral mechanisms and effector cells like natural killers (15).
T180 18490-18749 Sentence denotes In mice infected with SARS-CoV, a delayed and prolonged type I interferon (IFN-I) signaling leads to lung immunopathology as it promotes the accumulation of pathogenic inflammatory cells with increased lung cytokine/chemokine levels and vascular leakage (16).
T181 18750-18942 Sentence denotes This prolonged IFN-I and virally induced IL-10 set the scene for secondary bacterial infection, which can add a strong IL1β and TNFα-mediated inflammatory response to magnify lung damage (17).
T182 18943-19079 Sentence denotes Understanding how SARS-CoV-2 can manipulate IFN is vital in deciphering the battle of the body against the viral spread and consequence.
T183 19080-19321 Sentence denotes Our reanalysis of transcriptomic data showed that although the IFN pathway is upregulated consistently in SARS-CoV related infection, SARS-CoV-2 showed specific upregulation of the gene for a unique interferon-induced protein, namely IFITM3.
T184 19322-19479 Sentence denotes IFITM3 is a 15-kDa protein that localizes to endosomes and lysosomes and is possibly acquired by mammalian ancestral cells via horizontal gene transfer (18).
T185 19480-19701 Sentence denotes Interferon-induced transmembrane proteins (IFITMs 1, 2, and 3) are innate immune responders to virus infections as they regulate the fusion of invading virus and endocytic vesicles and direct it to the lysosomes (19, 20).
T186 19702-19797 Sentence denotes IFITM3 can further alter membrane rigidity and curvature to inhibit virus membrane fusion (21).
T187 19798-19918 Sentence denotes Such action is important to prevent the release of viral particles into the cytoplasm, which controls viral spread (22).
T188 19919-20147 Sentence denotes During influenza A infection of human airway epithelial cells, IFITM3 was shown to clusters on virus-containing endosomes and lysosomes within few hours post-infection, indicating its role in the early phase of viral entry (23).
T189 20148-20286 Sentence denotes Even platelets and megakaryocytes were shown to remarkably upregulate IFITM3 to prevent viral progression during influenza infection (24).
T190 20287-20527 Sentence denotes The epithelial cell and resident leukocytes in lung upper and lower airways that constitutively express IFITM3 can withstand viral infections, and this is vital to decide viral tropism as viruses favor cells with low IFITM3 expression (25).
T191 20528-20636 Sentence denotes IFITM3 enhances the accumulation of CD8+ T cells in airways to promote mucosal immune cell persistence (26).
T192 20637-20818 Sentence denotes Lung and circulating immune cells were reported to express less IFITM3 than other tissues, and this was a suggestive reason for COVID-19 severity and cytokine release syndrome (27).
T193 20819-21048 Sentence denotes Interestingly, IFITM3-rs12252-C/C SNP prevalence in the Chinese population is 26.5%, and recent research confirmed that SNPs in IFITM3 could change the severity of influenza infection, as was shown in one case with COVID-19 (28).
T194 21049-21160 Sentence denotes IFITM3 polymorphisms have been linked with hospitalization and mortality during influenza virus infection (29).
T195 21161-21441 Sentence denotes Expressing the gene is not the only prerequisite to the antiviral action of IFITM3, as it was found recently that within the protein, an amphipathic helix is critical for its blocking effect of viral fusion of similar pathogenic viruses like influenza A virus and Zika virus (30).
T196 21442-21569 Sentence denotes Another factor that regulates the IFITM3 trafficking specificity to such viruses is that it requires S-palmitoylation (19, 20).
T197 21570-21703 Sentence denotes S-palmitoylation (S-PALM) is the reversible process of linking a fatty acid chain to cysteine residues of the substrate protein (31).
T198 21704-21856 Sentence denotes Multiple zinc finger DHHC domain-containing palmitoyltransferases (ZDHHCs) can palmitoylate IFITM3 to make it a fully functional antiviral protein (32).
T199 21857-22117 Sentence denotes It seems that bats (order Chiroptera), which act as natural hosts for many viral infections, use IFITM3 as an antiviral mechanism if there is S-palmitoylation of the protein; however, if this modification is disturbed, the bat can develop viral infection (33).
T200 22118-22375 Sentence denotes Based on that, we can suggest that severe COVID-19 cases might be due to either non-functional IFITM3 by SNP, failure of lung cells to upregulate IFITM3 in response to interferon, a mutation in amphipathic helix sequence or modification in S-palmitoylation.
T201 22376-22508 Sentence denotes Further examination and screening for the IFITM3 dynamics in COVID-19 might explain the possible therapeutic and diagnostic options.
T202 22509-22767 Sentence denotes Our toxicogenomic analysis showed that valproic acid increased the mRNA expression of IFITM3, supporting a new report that the SARS-CoV-2-human protein-protein interaction map showed that valproic acid might be a potential repurposing drug for COVID-19 (34).
T203 22768-22940 Sentence denotes Virtual screening, docking, binding energy calculation, and simulation show that valproic acid forms stable interaction with nsP12 of CoV and can inhibit its function (14).
T204 22941-23104 Sentence denotes Valproic acid is currently used for the treatment of epilepsy and known to target histone deacetylases (HDACs) that modify the gene expression epigenetically (35).
T205 23105-23242 Sentence denotes Valproic acid was shown to inhibit mature and fully infectious enveloped viruses release as it alters cellular membrane composition (36).
T206 23243-23446 Sentence denotes The modest and broad antiviral activity of valproic acid made the drug an attractive possibility due to its availability, and limited side effects for a short term of use during acute viral disease (37).
T207 23447-23665 Sentence denotes The reported side effects like hepatotoxicity and teratogenicity are mainly associated with the parental compound valproate and can be avoided by the use of its derivatives like Valpromide (VPD) and valnoctamide (VCD).
T208 23666-23839 Sentence denotes A recent open-label proof-of-concept trial of 10 days Intravenous Valproic Acid for Severe COVID-19 showed a 50% reduction in the case fatality rate and length of stay (38).
T209 23840-23945 Sentence denotes More studies are needed to explore the promising potential of valproic acid in the treatment of COVID-19.
T210 23946-24238 Sentence denotes One limitation of the study is that it is based on the publicly available transcriptome dataset, which is limited in number, partly because this is a novel disease, but also because ongoing lockdowns have made it challenging for scientists to carry out the extensive laboratory work required.
T211 24240-24250 Sentence denotes Conclusion
T212 24251-24574 Sentence denotes Our evaluation showed that the analysis of publicly available transcriptomic data could be a reasonable approach to identify the novel target and suggest drugs that can modify the action of such targets during the early phases of emerging infections like COVID-19 until a complete understanding of the disease become clear.
T213 24575-24720 Sentence denotes This can justify the experimental use of clinically approved drugs and guide the clinicians in their limited options against such lethal disease.
T214 24722-24749 Sentence denotes Data Availability Statement
T215 24750-24838 Sentence denotes All datasets presented in this study are included in the article/supplementary material.
T216 24840-24860 Sentence denotes Author Contributions
T217 24861-24987 Sentence denotes All authors listed have made a substantial, direct and intellectual contribution to the work, and approved it for publication.
T218 24989-25009 Sentence denotes Conflict of Interest
T219 25010-25182 Sentence denotes The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T1 19736-19744 Phenotype denotes rigidity http://purl.obolibrary.org/obo/HP_0002063
T2 20787-20812 Phenotype denotes cytokine release syndrome http://purl.obolibrary.org/obo/HP_0033041
T3 22994-23002 Phenotype denotes epilepsy http://purl.obolibrary.org/obo/HP_0001250

TEST0

Id Subject Object Predicate Lexical cue
32595654-89-94-3362357 1471-1472 ["32075782"] denotes 1
32595654-148-153-3362358 1623-1624 ["32053148"] denotes 2
32595654-149-154-3362359 2323-2324 ["32109011"] denotes 3
32595654-79-85-3362360 3945-3947 ["23193258"] denotes 12
32595654-124-129-3362361 5205-5206 ["23029269"] denotes 4
32595654-183-188-3362362 5403-5404 ["20090954"] denotes 5
32595654-202-207-3362363 5620-5621 ["21533129"] denotes 6
32595654-151-156-3362364 5786-5787 ["30301856"] denotes 7
32595654-177-182-3362365 5978-5979 ["23365422"] denotes 8
32595654-238-243-3362366 6291-6292 ["23365422"] denotes 8
32595654-130-135-3362367 6436-6437 ["23935999"] denotes 9
32595654-216-221-3362368 6675-6676 ["23365422"] denotes 8
32595654-188-193-3362369 6878-6879 ["23365422"] denotes 8
32595654-121-127-3362370 7015-7017 ["25122212"] denotes 10
32595654-145-151-3362371 7297-7299 ["26015500"] denotes 11
32595654-117-123-3362372 16234-16236 ["30247620"] denotes 14
32595654-189-195-3362373 18485-18487 ["31635238"] denotes 15
32595654-233-239-3362374 18745-18747 ["26867177"] denotes 16
32595654-188-194-3362375 18938-18940 ["29881380"] denotes 17
32595654-153-159-3362376 19475-19477 ["29162141"] denotes 18
32595654-213-219-3362377 19693-19695 ["30643282"] denotes 19
32595654-217-223-3362378 19697-19699 ["30640957"] denotes 20
32595654-91-97-3362379 19793-19795 ["23358889"] denotes 21
32595654-116-122-3362380 19914-19916 ["30662816"] denotes 22
32595654-224-230-3362381 20143-20145 ["31212878"] denotes 23
32595654-134-140-3362382 20282-20284 ["30723081"] denotes 24
32595654-236-242-3362383 20523-20525 ["30987701"] denotes 25
32595654-104-110-3362384 20632-20634 ["23354485"] denotes 26
32595654-225-231-3362385 21044-21046 ["22446628"] denotes 28
32595654-107-113-3362386 21156-21158 ["28714988"] denotes 29
32595654-227-233-3362387 21437-21439 ["28835547"] denotes 30
32595654-119-125-3362388 21561-21563 ["30643282"] denotes 19
32595654-123-129-3362389 21565-21567 ["30640957"] denotes 20
32595654-129-135-3362390 21699-21701 ["29910712"] denotes 31
32595654-148-154-3362391 21852-21854 ["29079573"] denotes 32
32595654-237-243-3362392 22113-22115 ["31826928"] denotes 33
32595654-236-242-3362393 22763-22765 ["32511329"] denotes 34
32595654-168-174-3362394 22936-22938 ["30247620"] denotes 14
32595654-159-165-3362395 23100-23102 ["32180123"] denotes 35
32595654-133-139-3362396 23238-23240 ["25108320"] denotes 36

2_test

Id Subject Object Predicate Lexical cue
32595654-32075782-34940619 1471-1472 32075782 denotes 1
32595654-32053148-34940620 1623-1624 32053148 denotes 2
32595654-32109011-34940621 2323-2324 32109011 denotes 3
32595654-23193258-34940622 3945-3947 23193258 denotes 12
32595654-23029269-34940623 5205-5206 23029269 denotes 4
32595654-20090954-34940624 5403-5404 20090954 denotes 5
32595654-21533129-34940625 5620-5621 21533129 denotes 6
32595654-30301856-34940626 5786-5787 30301856 denotes 7
32595654-23365422-34940627 5978-5979 23365422 denotes 8
32595654-23365422-34940628 6291-6292 23365422 denotes 8
32595654-23935999-34940629 6436-6437 23935999 denotes 9
32595654-23365422-34940630 6675-6676 23365422 denotes 8
32595654-23365422-34940631 6878-6879 23365422 denotes 8
32595654-25122212-34940632 7015-7017 25122212 denotes 10
32595654-26015500-34940633 7297-7299 26015500 denotes 11
32595654-30247620-34940634 16234-16236 30247620 denotes 14
32595654-31635238-34940635 18485-18487 31635238 denotes 15
32595654-26867177-34940636 18745-18747 26867177 denotes 16
32595654-29881380-34940637 18938-18940 29881380 denotes 17
32595654-29162141-34940638 19475-19477 29162141 denotes 18
32595654-30643282-34940639 19693-19695 30643282 denotes 19
32595654-30640957-34940640 19697-19699 30640957 denotes 20
32595654-23358889-34940641 19793-19795 23358889 denotes 21
32595654-30662816-34940642 19914-19916 30662816 denotes 22
32595654-31212878-34940643 20143-20145 31212878 denotes 23
32595654-30723081-34940644 20282-20284 30723081 denotes 24
32595654-30987701-34940645 20523-20525 30987701 denotes 25
32595654-23354485-34940646 20632-20634 23354485 denotes 26
32595654-22446628-34940647 21044-21046 22446628 denotes 28
32595654-28714988-34940648 21156-21158 28714988 denotes 29
32595654-28835547-34940649 21437-21439 28835547 denotes 30
32595654-30643282-34940650 21561-21563 30643282 denotes 19
32595654-30640957-34940651 21565-21567 30640957 denotes 20
32595654-29910712-34940652 21699-21701 29910712 denotes 31
32595654-29079573-34940653 21852-21854 29079573 denotes 32
32595654-31826928-34940654 22113-22115 31826928 denotes 33
32595654-32511329-34940655 22763-22765 32511329 denotes 34
32595654-30247620-34940656 22936-22938 30247620 denotes 14
32595654-32180123-34940657 23100-23102 32180123 denotes 35
32595654-25108320-34940658 23238-23240 25108320 denotes 36

MyTest

Id Subject Object Predicate Lexical cue
32595654-32075782-34940619 1471-1472 32075782 denotes 1
32595654-32053148-34940620 1623-1624 32053148 denotes 2
32595654-32109011-34940621 2323-2324 32109011 denotes 3
32595654-23193258-34940622 3945-3947 23193258 denotes 12
32595654-23029269-34940623 5205-5206 23029269 denotes 4
32595654-20090954-34940624 5403-5404 20090954 denotes 5
32595654-21533129-34940625 5620-5621 21533129 denotes 6
32595654-30301856-34940626 5786-5787 30301856 denotes 7
32595654-23365422-34940627 5978-5979 23365422 denotes 8
32595654-23365422-34940628 6291-6292 23365422 denotes 8
32595654-23935999-34940629 6436-6437 23935999 denotes 9
32595654-23365422-34940630 6675-6676 23365422 denotes 8
32595654-23365422-34940631 6878-6879 23365422 denotes 8
32595654-25122212-34940632 7015-7017 25122212 denotes 10
32595654-26015500-34940633 7297-7299 26015500 denotes 11
32595654-30247620-34940634 16234-16236 30247620 denotes 14
32595654-31635238-34940635 18485-18487 31635238 denotes 15
32595654-26867177-34940636 18745-18747 26867177 denotes 16
32595654-29881380-34940637 18938-18940 29881380 denotes 17
32595654-29162141-34940638 19475-19477 29162141 denotes 18
32595654-30643282-34940639 19693-19695 30643282 denotes 19
32595654-30640957-34940640 19697-19699 30640957 denotes 20
32595654-23358889-34940641 19793-19795 23358889 denotes 21
32595654-30662816-34940642 19914-19916 30662816 denotes 22
32595654-31212878-34940643 20143-20145 31212878 denotes 23
32595654-30723081-34940644 20282-20284 30723081 denotes 24
32595654-30987701-34940645 20523-20525 30987701 denotes 25
32595654-23354485-34940646 20632-20634 23354485 denotes 26
32595654-22446628-34940647 21044-21046 22446628 denotes 28
32595654-28714988-34940648 21156-21158 28714988 denotes 29
32595654-28835547-34940649 21437-21439 28835547 denotes 30
32595654-30643282-34940650 21561-21563 30643282 denotes 19
32595654-30640957-34940651 21565-21567 30640957 denotes 20
32595654-29910712-34940652 21699-21701 29910712 denotes 31
32595654-29079573-34940653 21852-21854 29079573 denotes 32
32595654-31826928-34940654 22113-22115 31826928 denotes 33
32595654-32511329-34940655 22763-22765 32511329 denotes 34
32595654-30247620-34940656 22936-22938 30247620 denotes 14
32595654-32180123-34940657 23100-23102 32180123 denotes 35
32595654-25108320-34940658 23238-23240 25108320 denotes 36

PubTator4TogoVar

Id Subject Object Predicate Lexical cue resolved_to
15566 20841-20848 SNP denotes rs12252 tmVar:rs12252;VariantGroup:0;CorrespondingGene:10410;RS#:12252;CorrespondingSpecies:9606

PubTatorOnTogoVar

Id Subject Object Predicate Lexical cue resolved_to
15566 20841-20848 SNP denotes rs12252 tmVar:rs12252;VariantGroup:0;CorrespondingGene:10410;RS#:12252;CorrespondingSpecies:9606
T1 20841-20848 SNP denotes rs12252 tmVar:rs12252;VariantGroup:0;CorrespondingGene:10410;RS#:12252;CorrespondingSpecies:9606