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PMC:7301188 / 3591-4668 JSONTXT

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LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T30 30-36 NCBITaxon:859912 denotes Corona
T31 341-350 UBERON:0002048 denotes pneumonia
T32 424-441 UBERON:0000065 denotes respiratory tract
T33 456-465 UBERON:0002048 denotes pneumonia
T34 547-558 UBERON:0001004 denotes respiratory
T35 649-657 UBERON:0001637 denotes arterial
T36 816-825 UBERON:0002048 denotes pulmonary
T37 909-920 UBERON:0001004 denotes respiratory
T38 1017-1022 UBERON:0000062 denotes organ
T55122 30-36 NCBITaxon:859912 denotes Corona
T25183 341-350 UBERON:0002048 denotes pneumonia
T28285 424-441 UBERON:0000065 denotes respiratory tract
T87513 456-465 UBERON:0002048 denotes pneumonia
T92813 547-558 UBERON:0001004 denotes respiratory
T4800 649-657 UBERON:0001637 denotes arterial
T31469 816-825 UBERON:0002048 denotes pulmonary
T70684 909-920 UBERON:0001004 denotes respiratory
T87749 1017-1022 UBERON:0000062 denotes organ

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T4 424-441 Body_part denotes respiratory tract http://purl.org/sig/ont/fma/fma265130
T5 1017-1022 Body_part denotes organ http://purl.org/sig/ont/fma/fma67498

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T3 424-441 Body_part denotes respiratory tract http://purl.obolibrary.org/obo/UBERON_0000065
T4 1017-1022 Body_part denotes organ http://purl.obolibrary.org/obo/UBERON_0000062

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
106 152-158 Species denotes People Tax:9606
107 753-761 Species denotes Patients Tax:9606
108 594-600 Chemical denotes oxygen MESH:D010100
109 678-684 Chemical denotes oxygen MESH:D010100
110 692-698 Chemical denotes oxygen MESH:D010100
111 714-718 Chemical denotes FiO2
112 30-55 Disease denotes Corona Virus Disease 2019 MESH:C000657245
113 341-350 Disease denotes pneumonia MESH:D011014
114 414-419 Disease denotes fever MESH:D005334
115 424-450 Disease denotes respiratory tract symptoms MESH:D012140
116 456-465 Disease denotes pneumonia MESH:D011014
117 547-567 Disease denotes respiratory distress MESH:D012128
118 909-928 Disease denotes respiratory failure MESH:D012131
119 1017-1030 Disease denotes organ failure MESH:D009102

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T41 30-55 Disease denotes Corona Virus Disease 2019 http://purl.obolibrary.org/obo/MONDO_0100096
T42 341-350 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T43 456-465 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T44 909-928 Disease denotes respiratory failure http://purl.obolibrary.org/obo/MONDO_0021113

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T37 37-42 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes Virus
T38 632-633 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T39 649-657 http://purl.obolibrary.org/obo/UBERON_0001637 denotes arterial
T40 649-657 http://www.ebi.ac.uk/efo/EFO_0000814 denotes arterial
T41 804-806 http://purl.obolibrary.org/obo/CLO_0001382 denotes 48
T42 1017-1022 http://purl.obolibrary.org/obo/UBERON_0003103 denotes organ

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T25 569-571 Chemical denotes RR http://purl.obolibrary.org/obo/CHEBI_73811
T26 594-600 Chemical denotes oxygen http://purl.obolibrary.org/obo/CHEBI_25805
T27 678-684 Chemical denotes oxygen http://purl.obolibrary.org/obo/CHEBI_25805
T28 692-698 Chemical denotes oxygen http://purl.obolibrary.org/obo/CHEBI_25805

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T41 0-56 Sentence denotes According to the Guidance for Corona Virus Disease 2019:
T42 57-752 Sentence denotes Prevention, Control, Diagnosis, and Management edited by the National Health Commission of the People's Republic of China, all cases were identified into four categories of mild cases, ordinary cases, severe cases, and critical cases. (1) Mild cases had mild clinical symptoms and no pneumonia manifestation in imaging. (2) Ordinary cases had symptoms like fever and respiratory tract symptoms, and pneumonia manifestation can be seen in imaging. (3) Severe cases met any of the following: respiratory distress, RR ≥ 30 breaths/min; the oxygen saturation is less than 93% at a rest state; or arterial partial pressure of oxygen (PaO2)/oxygen concentration (FiO2) ≤ 300 mmHg (1 mmHg = 0.133 kPa).
T43 753-1077 Sentence denotes Patients with >50% lesion progression within 24 to 48 hours in pulmonary imaging were treated as severe cases. (4) Critical cases met any of the following: respiratory failure occurs, and mechanical ventilation is required; shock occurs; or complicated with other organ failure that requires monitoring and treatment in ICU.

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T3 341-350 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T4 414-419 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T5 456-465 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T6 547-567 Phenotype denotes respiratory distress http://purl.obolibrary.org/obo/HP_0002098
T7 909-928 Phenotype denotes respiratory failure http://purl.obolibrary.org/obo/HP_0002878
T8 977-982 Phenotype denotes shock http://purl.obolibrary.org/obo/HP_0031273