PMC:7301188 / 3591-4668
Annnotations
LitCovid-PMC-OGER-BB
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T30 | 30-36 | NCBITaxon:859912 | denotes | Corona |
T31 | 341-350 | UBERON:0002048 | denotes | pneumonia |
T32 | 424-441 | UBERON:0000065 | denotes | respiratory tract |
T33 | 456-465 | UBERON:0002048 | denotes | pneumonia |
T34 | 547-558 | UBERON:0001004 | denotes | respiratory |
T35 | 649-657 | UBERON:0001637 | denotes | arterial |
T36 | 816-825 | UBERON:0002048 | denotes | pulmonary |
T37 | 909-920 | UBERON:0001004 | denotes | respiratory |
T38 | 1017-1022 | UBERON:0000062 | denotes | organ |
T55122 | 30-36 | NCBITaxon:859912 | denotes | Corona |
T25183 | 341-350 | UBERON:0002048 | denotes | pneumonia |
T28285 | 424-441 | UBERON:0000065 | denotes | respiratory tract |
T87513 | 456-465 | UBERON:0002048 | denotes | pneumonia |
T92813 | 547-558 | UBERON:0001004 | denotes | respiratory |
T4800 | 649-657 | UBERON:0001637 | denotes | arterial |
T31469 | 816-825 | UBERON:0002048 | denotes | pulmonary |
T70684 | 909-920 | UBERON:0001004 | denotes | respiratory |
T87749 | 1017-1022 | UBERON:0000062 | denotes | organ |
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T4 | 424-441 | Body_part | denotes | respiratory tract | http://purl.org/sig/ont/fma/fma265130 |
T5 | 1017-1022 | Body_part | denotes | organ | http://purl.org/sig/ont/fma/fma67498 |
LitCovid-PD-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T3 | 424-441 | Body_part | denotes | respiratory tract | http://purl.obolibrary.org/obo/UBERON_0000065 |
T4 | 1017-1022 | Body_part | denotes | organ | http://purl.obolibrary.org/obo/UBERON_0000062 |
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
106 | 152-158 | Species | denotes | People | Tax:9606 |
107 | 753-761 | Species | denotes | Patients | Tax:9606 |
108 | 594-600 | Chemical | denotes | oxygen | MESH:D010100 |
109 | 678-684 | Chemical | denotes | oxygen | MESH:D010100 |
110 | 692-698 | Chemical | denotes | oxygen | MESH:D010100 |
111 | 714-718 | Chemical | denotes | FiO2 | |
112 | 30-55 | Disease | denotes | Corona Virus Disease 2019 | MESH:C000657245 |
113 | 341-350 | Disease | denotes | pneumonia | MESH:D011014 |
114 | 414-419 | Disease | denotes | fever | MESH:D005334 |
115 | 424-450 | Disease | denotes | respiratory tract symptoms | MESH:D012140 |
116 | 456-465 | Disease | denotes | pneumonia | MESH:D011014 |
117 | 547-567 | Disease | denotes | respiratory distress | MESH:D012128 |
118 | 909-928 | Disease | denotes | respiratory failure | MESH:D012131 |
119 | 1017-1030 | Disease | denotes | organ failure | MESH:D009102 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T41 | 30-55 | Disease | denotes | Corona Virus Disease 2019 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T42 | 341-350 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
T43 | 456-465 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
T44 | 909-928 | Disease | denotes | respiratory failure | http://purl.obolibrary.org/obo/MONDO_0021113 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T37 | 37-42 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | Virus |
T38 | 632-633 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T39 | 649-657 | http://purl.obolibrary.org/obo/UBERON_0001637 | denotes | arterial |
T40 | 649-657 | http://www.ebi.ac.uk/efo/EFO_0000814 | denotes | arterial |
T41 | 804-806 | http://purl.obolibrary.org/obo/CLO_0001382 | denotes | 48 |
T42 | 1017-1022 | http://purl.obolibrary.org/obo/UBERON_0003103 | denotes | organ |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T25 | 569-571 | Chemical | denotes | RR | http://purl.obolibrary.org/obo/CHEBI_73811 |
T26 | 594-600 | Chemical | denotes | oxygen | http://purl.obolibrary.org/obo/CHEBI_25805 |
T27 | 678-684 | Chemical | denotes | oxygen | http://purl.obolibrary.org/obo/CHEBI_25805 |
T28 | 692-698 | Chemical | denotes | oxygen | http://purl.obolibrary.org/obo/CHEBI_25805 |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T41 | 0-56 | Sentence | denotes | According to the Guidance for Corona Virus Disease 2019: |
T42 | 57-752 | Sentence | denotes | Prevention, Control, Diagnosis, and Management edited by the National Health Commission of the People's Republic of China, all cases were identified into four categories of mild cases, ordinary cases, severe cases, and critical cases. (1) Mild cases had mild clinical symptoms and no pneumonia manifestation in imaging. (2) Ordinary cases had symptoms like fever and respiratory tract symptoms, and pneumonia manifestation can be seen in imaging. (3) Severe cases met any of the following: respiratory distress, RR ≥ 30 breaths/min; the oxygen saturation is less than 93% at a rest state; or arterial partial pressure of oxygen (PaO2)/oxygen concentration (FiO2) ≤ 300 mmHg (1 mmHg = 0.133 kPa). |
T43 | 753-1077 | Sentence | denotes | Patients with >50% lesion progression within 24 to 48 hours in pulmonary imaging were treated as severe cases. (4) Critical cases met any of the following: respiratory failure occurs, and mechanical ventilation is required; shock occurs; or complicated with other organ failure that requires monitoring and treatment in ICU. |
LitCovid-PD-HP
Id | Subject | Object | Predicate | Lexical cue | hp_id |
---|---|---|---|---|---|
T3 | 341-350 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
T4 | 414-419 | Phenotype | denotes | fever | http://purl.obolibrary.org/obo/HP_0001945 |
T5 | 456-465 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
T6 | 547-567 | Phenotype | denotes | respiratory distress | http://purl.obolibrary.org/obo/HP_0002098 |
T7 | 909-928 | Phenotype | denotes | respiratory failure | http://purl.obolibrary.org/obo/HP_0002878 |
T8 | 977-982 | Phenotype | denotes | shock | http://purl.obolibrary.org/obo/HP_0031273 |