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PMC:7299399 / 43926-44429 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T199 14-22 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T200 45-50 Body_part denotes sugar http://purl.org/sig/ont/fma/fma82737
T201 92-102 Body_part denotes amino acid http://purl.org/sig/ont/fma/fma82739
T202 135-153 Body_part denotes glycosaminoglycans http://purl.org/sig/ont/fma/fma63011
T203 155-159 Body_part denotes GAGs http://purl.org/sig/ont/fma/fma63011
T204 164-179 Body_part denotes heparan sulfate http://purl.org/sig/ont/fma/fma63023
T205 181-183 Body_part denotes HS http://purl.org/sig/ont/fma/fma63023
T206 495-499 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T403 225-230 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T404 475-482 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T405 495-499 http://purl.obolibrary.org/obo/GO_0005623 denotes cell

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T338 14-22 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T339 92-102 Chemical denotes amino acid http://purl.obolibrary.org/obo/CHEBI_33709
T340 92-97 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T341 98-102 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T342 135-153 Chemical denotes glycosaminoglycans http://purl.obolibrary.org/obo/CHEBI_18085
T343 155-159 Chemical denotes GAGs http://purl.obolibrary.org/obo/CHEBI_18085
T344 164-179 Chemical denotes heparan sulfate http://purl.obolibrary.org/obo/CHEBI_28815
T345 164-171 Chemical denotes heparan http://purl.obolibrary.org/obo/CHEBI_24500
T346 172-179 Chemical denotes sulfate http://purl.obolibrary.org/obo/CHEBI_16189
T347 181-183 Chemical denotes HS http://purl.obolibrary.org/obo/CHEBI_74056|http://purl.obolibrary.org/obo/CHEBI_28815
T349 329-337 Chemical denotes molecule http://purl.obolibrary.org/obo/CHEBI_25367
T350 338-348 Chemical denotes inhibitors http://purl.obolibrary.org/obo/CHEBI_35222
T351 428-431 Chemical denotes NPs http://purl.obolibrary.org/obo/CHEBI_50803

LitCovid-PD-GlycoEpitope

Id Subject Object Predicate Lexical cue glyco_epitope_db_id
T2 164-179 GlycoEpitope denotes heparan sulfate http://www.glycoepitope.jp/epitopes/EP0086
T3 181-183 GlycoEpitope denotes HS http://www.glycoepitope.jp/epitopes/EP0086

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T171 0-503 Sentence denotes Viral surface proteins are often modified by sugar moieties or encompass positively charged amino acid patches that bind to lectins or glycosaminoglycans (GAGs) of heparan sulfate (HS), respectively.32 Robust interactions of virus particles with these host receptors is ensured by multivalent binding, which is likely why single-molecule inhibitors often are not capable of efficiently perturbing this key event but multivalent NPs are superior to block binding of different viruses to the host cell.125

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
654 45-50 Chemical denotes sugar MESH:D000073893
655 135-153 Chemical denotes glycosaminoglycans MESH:D006025
656 164-179 Chemical denotes heparan sulfate MESH:D006497
657 181-183 Chemical denotes HS MESH:D006497

2_test

Id Subject Object Predicate Lexical cue
32519842-27575283-158548 199-201 27575283 denotes 32
32519842-20394070-158549 500-503 20394070 denotes 125