PMC:7299399 / 31421-31843
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T139 | 23-34 | Body_part | denotes | macrophages | http://purl.org/sig/ont/fma/fma63261 |
| T140 | 92-103 | Body_part | denotes | macrophages | http://purl.org/sig/ont/fma/fma63261 |
| T141 | 184-186 | Body_part | denotes | IL | http://purl.org/sig/ont/fma/fma86578 |
| T142 | 214-220 | Body_part | denotes | spleen | http://purl.org/sig/ont/fma/fma7196 |
| T143 | 225-236 | Body_part | denotes | lymph nodes | http://purl.org/sig/ont/fma/fma5034 |
| T144 | 225-230 | Body_part | denotes | lymph | http://purl.org/sig/ont/fma/fma9671 |
| T145 | 305-316 | Body_part | denotes | lymph nodes | http://purl.org/sig/ont/fma/fma5034 |
| T146 | 305-310 | Body_part | denotes | lymph | http://purl.org/sig/ont/fma/fma9671 |
| T147 | 321-327 | Body_part | denotes | spleen | http://purl.org/sig/ont/fma/fma7196 |
| T148 | 328-334 | Body_part | denotes | tissue | http://purl.org/sig/ont/fma/fma9637 |
| T149 | 400-411 | Body_part | denotes | lymphocytic | http://purl.org/sig/ont/fma/fma62863 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T33 | 214-220 | Body_part | denotes | spleen | http://purl.obolibrary.org/obo/UBERON_0002106 |
| T34 | 225-236 | Body_part | denotes | lymph nodes | http://purl.obolibrary.org/obo/UBERON_0000029 |
| T35 | 225-230 | Body_part | denotes | lymph | http://purl.obolibrary.org/obo/UBERON_0002391 |
| T36 | 305-316 | Body_part | denotes | lymph nodes | http://purl.obolibrary.org/obo/UBERON_0000029 |
| T37 | 305-310 | Body_part | denotes | lymph | http://purl.obolibrary.org/obo/UBERON_0002391 |
| T38 | 321-327 | Body_part | denotes | spleen | http://purl.obolibrary.org/obo/UBERON_0002106 |
| T39 | 328-334 | Body_part | denotes | tissue | http://purl.obolibrary.org/obo/UBERON_0000479 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T117 | 38-46 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T118 | 115-123 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T119 | 382-390 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T287 | 80-84 | http://purl.obolibrary.org/obo/PR_000002064 | denotes | CD68 |
| T288 | 214-220 | http://purl.obolibrary.org/obo/UBERON_0002106 | denotes | spleen |
| T289 | 225-236 | http://purl.obolibrary.org/obo/UBERON_0000029 | denotes | lymph nodes |
| T290 | 305-316 | http://purl.obolibrary.org/obo/UBERON_0000029 | denotes | lymph nodes |
| T291 | 321-327 | http://purl.obolibrary.org/obo/UBERON_0002106 | denotes | spleen |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T234 | 140-147 | Chemical | denotes | antigen | http://purl.obolibrary.org/obo/CHEBI_59132 |
| T235 | 184-186 | Chemical | denotes | IL | http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T41 | 400-421 | http://purl.obolibrary.org/obo/GO_0070227 | denotes | lymphocytic apoptosis |
| T42 | 412-421 | http://purl.obolibrary.org/obo/GO_0097194 | denotes | apoptosis |
| T43 | 412-421 | http://purl.obolibrary.org/obo/GO_0006915 | denotes | apoptosis |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T123 | 0-422 | Sentence | denotes | Concerning the role of macrophages in COVID-19, the presence of ACE2-expressing CD68+CD169+ macrophages containing SARS-CoV-2 nucleoprotein antigen and showing an increased release of IL-6 was observed in infected spleen and lymph nodes.100 Notably, immunohistochemical and immunofluorescence analyses of lymph nodes and spleen tissue from autopsy samples of patients who died from COVID-19 revealed lymphocytic apoptosis. |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 505 | 64-68 | Gene | denotes | ACE2 | Gene:59272 |
| 506 | 80-84 | Gene | denotes | CD68 | Gene:968 |
| 507 | 85-90 | Gene | denotes | CD169 | Gene:6614 |
| 508 | 184-188 | Gene | denotes | IL-6 | Gene:3569 |
| 512 | 359-367 | Species | denotes | patients | Tax:9606 |
| 517 | 115-125 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 520 | 38-46 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 521 | 205-213 | Disease | denotes | infected | MESH:D007239 |
| 522 | 372-376 | Disease | denotes | died | MESH:D003643 |
| 523 | 382-390 | Disease | denotes | COVID-19 | MESH:C000657245 |