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PMC:7295558 / 5060-5987 JSONTXT

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LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T51 716-719 PR:000005897 denotes CRP
T52 738-756 PR:000005897 denotes C-reactive protein
T53 770-781 UBERON:0001004 denotes respiratory
T54 883-893 UBERON:0002349 denotes myocardial
T55 905-912 CHEBI:24996;CHEBI:24996 denotes lactate
T98688 716-719 PR:000005897 denotes CRP
T60157 738-756 PR:000005897 denotes C-reactive protein
T60040 770-781 UBERON:0001004 denotes respiratory
T57755 883-893 UBERON:0002349 denotes myocardial
T46900 905-912 CHEBI:24996;CHEBI:24996 denotes lactate

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T6 173-181 Body_part denotes Prostate http://purl.org/sig/ont/fma/fma9600
T7 190-193 Body_part denotes HIV http://purl.org/sig/ont/fma/fma278683
T8 206-222 Body_part denotes White blood cell http://purl.org/sig/ont/fma/fma62852
T9 218-222 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T10 256-267 Body_part denotes Lymphocytes http://purl.org/sig/ont/fma/fma62863
T11 299-304 Body_part denotes Serum http://purl.org/sig/ont/fma/fma63083
T12 395-402 Body_part denotes Alanine http://purl.org/sig/ont/fma/fma82749
T13 749-756 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T14 827-837 Body_part denotes troponin I http://purl.org/sig/ont/fma/fma62340
T15 827-835 Body_part denotes troponin http://purl.org/sig/ont/fma/fma62338

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T6 212-217 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178
T7 299-304 Body_part denotes Serum http://purl.obolibrary.org/obo/UBERON_0001977

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T39 173-188 Disease denotes Prostate cancer http://purl.obolibrary.org/obo/MONDO_0008315
T40 182-188 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T41 499-503 Disease denotes ARDS http://purl.obolibrary.org/obo/MONDO_0006502
T42 568-574 Disease denotes injury http://purl.obolibrary.org/obo/MONDO_0021178
T43 621-623 Disease denotes CK http://purl.obolibrary.org/obo/MONDO_0017941
T44 650-652 Disease denotes CK http://purl.obolibrary.org/obo/MONDO_0017941
T45 758-762 Disease denotes ARDS http://purl.obolibrary.org/obo/MONDO_0006502
T46 764-799 Disease denotes acute respiratory distress syndrome http://purl.obolibrary.org/obo/MONDO_0006502
T47 770-799 Disease denotes respiratory distress syndrome http://purl.obolibrary.org/obo/MONDO_0009971
T48 839-841 Disease denotes CK http://purl.obolibrary.org/obo/MONDO_0017941
T49 860-862 Disease denotes CK http://purl.obolibrary.org/obo/MONDO_0017941

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T45 107-111 http://purl.obolibrary.org/obo/UBERON_0003101 denotes Male
T46 107-111 http://www.ebi.ac.uk/efo/EFO_0000970 denotes Male
T47 113-117 http://purl.obolibrary.org/obo/UBERON_0003101 denotes Male
T48 113-117 http://www.ebi.ac.uk/efo/EFO_0000970 denotes Male
T49 119-123 http://purl.obolibrary.org/obo/UBERON_0003101 denotes Male
T50 119-123 http://www.ebi.ac.uk/efo/EFO_0000970 denotes Male
T51 125-129 http://purl.obolibrary.org/obo/UBERON_0003101 denotes Male
T52 125-129 http://www.ebi.ac.uk/efo/EFO_0000970 denotes Male
T53 212-217 http://www.ebi.ac.uk/efo/EFO_0000296 denotes blood
T54 218-222 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T55 476-478 http://purl.obolibrary.org/obo/CLO_0050509 denotes 27
T56 653-655 http://purl.obolibrary.org/obo/PR_000010213 denotes MB
T57 680-681 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T58 863-865 http://purl.obolibrary.org/obo/PR_000010213 denotes MB

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T13 305-315 Chemical denotes creatinine http://purl.obolibrary.org/obo/CHEBI_16737
T14 395-402 Chemical denotes Alanine http://purl.obolibrary.org/obo/CHEBI_16449
T15 749-756 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T16 843-851 Chemical denotes creatine http://purl.obolibrary.org/obo/CHEBI_16919|http://purl.obolibrary.org/obo/CHEBI_57947
T18 867-875 Chemical denotes creatine http://purl.obolibrary.org/obo/CHEBI_16919|http://purl.obolibrary.org/obo/CHEBI_57947
T20 905-912 Chemical denotes lactate http://purl.obolibrary.org/obo/CHEBI_24996

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T4 650-655 http://purl.obolibrary.org/obo/GO_0004111 denotes CK-MB
T5 860-865 http://purl.obolibrary.org/obo/GO_0004111 denotes CK-MB

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T49 0-57 Sentence denotes Table 1 Baseline Clinical and Laboratory Characteristics
T50 58-98 Sentence denotes Variable Case 1 Case 2 Case 3 Case 4
T51 99-129 Sentence denotes Gender Male Male Male Male
T52 130-157 Sentence denotes Age (years) 76 64 66 26
T53 158-205 Sentence denotes Comorbidities Prostate cancer HIV None None
T54 206-255 Sentence denotes White blood cell count, /µL 11.2 8.6 14.3 8.1
T55 256-298 Sentence denotes Lymphocytes, /µL 0.306 0.483 0.563 1.4
T56 299-342 Sentence denotes Serum creatinine, mg/dL 0.9 0.9 5.3 0.8
T57 343-359 Sentence denotes Aminotransferase
T58 360-392 Sentence denotes   Aspartate, U/L 44 96 99 68
T59 393-424 Sentence denotes   Alanine, U/L 40 108 43 85
T60 425-458 Sentence denotes   Albumin, g/dL 2.1 2 2.7 3.4
T61 459-496 Sentence denotes   hs-CRP, mg/dL 27 20.6 23.1 11.3
T62 497-523 Sentence denotes   ARDS Yes Yes Yes Yes
T63 524-559 Sentence denotes   PaO2/FiO2 ratio 59 66 180 258
T64 560-582 Sentence denotes Cardiac injury markers
T65 583-618 Sentence denotes   hs-TpnI, ng/L 2.8 5.4 5.6 1.4
T66 619-647 Sentence denotes   CK, U/L 721 868 517 50
T67 648-681 Sentence denotes   CK-MB, U/L 29 35.3 26.5 n/a
T68 682-712 Sentence denotes   LDH, U/L 312 259 424 317
T69 713-927 Sentence denotes hs-CRP: high-sensitivity C-reactive protein; ARDS: acute respiratory distress syndrome; hs-TpnI: high-sensitivity troponin I; CK: creatine kinase; CK-MB: creatine kinase myocardial band; LDH: lactate dehydrogenase.

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T19 173-188 Phenotype denotes Prostate cancer http://purl.obolibrary.org/obo/HP_0012125
T20 770-790 Phenotype denotes respiratory distress http://purl.obolibrary.org/obo/HP_0002098

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
113 464-467 Gene denotes CRP Gene:1401
114 650-652 Gene denotes CK Gene:51727
115 621-623 Gene denotes CK Gene:51727
116 305-315 Chemical denotes creatinine MESH:D003404
117 173-193 Disease denotes Prostate cancer HIV MESH:D011471
118 499-503 Disease denotes ARDS MESH:D012128
119 560-574 Disease denotes Cardiac injury MESH:D006331
125 738-756 Gene denotes C-reactive protein Gene:1401
126 867-882 Gene denotes creatine kinase Gene:51727
127 716-719 Gene denotes CRP Gene:1401
128 758-762 Disease denotes ARDS MESH:D012128
129 764-799 Disease denotes acute respiratory distress syndrome MESH:D012128