PMC:7294857 / 11215-12210
Annnotations
LitCovid-PMC-OGER-BB
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T104 | 46-51 | UBERON:0002048 | denotes | cough |
| T105 | 65-71 | UBERON:0000341 | denotes | throat |
| T106 | 89-94 | UBERON:0000004 | denotes | nasal |
| T107 | 252-263 | UBERON:0001004 | denotes | respiratory |
| T108 | 289-300 | UBERON:0001004 | denotes | respiratory |
| T109 | 360-365 | UBERON:0000178 | denotes | blood |
| T110 | 414-418 | UBERON:0002048 | denotes | lung |
| T111 | 450-455 | UBERON:0000062 | denotes | organ |
| T112 | 575-581 | UBERON:0002048 | denotes | breath |
| T113 | 692-703 | UBERON:0001004 | denotes | respiratory |
| T114 | 722-738 | UBERON:0001555 | denotes | gastrointestinal |
| T115 | 791-796 | UBERON:0000178 | denotes | blood |
| T116 | 836-841 | CL:0000738 | denotes | white |
| T117 | 842-847 | CL:0000738;UBERON:0000178 | denotes | blood |
| T118 | 848-852 | CL:0000738 | denotes | cell |
| T119 | 870-880 | CL:0000542 | denotes | lymphocyte |
| T120 | 964-982 | PR:000005897 | denotes | C-reactive protein |
| T23607 | 46-51 | UBERON:0002048 | denotes | cough |
| T91851 | 65-71 | UBERON:0000341 | denotes | throat |
| T892 | 89-94 | UBERON:0000004 | denotes | nasal |
| T60111 | 252-263 | UBERON:0001004 | denotes | respiratory |
| T29667 | 289-300 | UBERON:0001004 | denotes | respiratory |
| T83645 | 360-365 | UBERON:0000178 | denotes | blood |
| T1218 | 414-418 | UBERON:0002048 | denotes | lung |
| T2171 | 450-455 | UBERON:0000062 | denotes | organ |
| T39359 | 575-581 | UBERON:0002048 | denotes | breath |
| T60742 | 692-703 | UBERON:0001004 | denotes | respiratory |
| T5833 | 722-738 | UBERON:0001555 | denotes | gastrointestinal |
| T71168 | 791-796 | UBERON:0000178 | denotes | blood |
| T83335 | 836-841 | CL:0000738 | denotes | white |
| T45337 | 842-847 | CL:0000738;UBERON:0000178 | denotes | blood |
| T47245 | 848-852 | CL:0000738 | denotes | cell |
| T11354 | 870-880 | CL:0000542 | denotes | lymphocyte |
| T14424 | 964-982 | PR:000005897 | denotes | C-reactive protein |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T25 | 65-71 | Body_part | denotes | throat | http://purl.org/sig/ont/fma/fma228738 |
| T26 | 119-123 | Body_part | denotes | body | http://purl.org/sig/ont/fma/fma256135 |
| T27 | 360-365 | Body_part | denotes | blood | http://purl.org/sig/ont/fma/fma9670 |
| T28 | 414-418 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
| T29 | 450-455 | Body_part | denotes | organ | http://purl.org/sig/ont/fma/fma67498 |
| T30 | 791-796 | Body_part | denotes | blood | http://purl.org/sig/ont/fma/fma9670 |
| T31 | 836-852 | Body_part | denotes | white blood cell | http://purl.org/sig/ont/fma/fma62852 |
| T32 | 848-852 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T33 | 870-880 | Body_part | denotes | lymphocyte | http://purl.org/sig/ont/fma/fma62863 |
| T34 | 975-982 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T10 | 65-71 | Body_part | denotes | throat | http://purl.obolibrary.org/obo/UBERON_0000341 |
| T11 | 360-365 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
| T12 | 414-418 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
| T13 | 450-455 | Body_part | denotes | organ | http://purl.obolibrary.org/obo/UBERON_0000062 |
| T14 | 791-796 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
| T15 | 842-847 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T56 | 60-71 | Disease | denotes | sore throat | http://purl.obolibrary.org/obo/MONDO_0002258 |
| T57 | 252-271 | Disease | denotes | respiratory failure | http://purl.obolibrary.org/obo/MONDO_0021113 |
| T58 | 756-764 | Disease | denotes | diarrhea | http://purl.obolibrary.org/obo/MONDO_0001673 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T77 | 360-365 | http://purl.obolibrary.org/obo/UBERON_0000178 | denotes | blood |
| T78 | 360-365 | http://www.ebi.ac.uk/efo/EFO_0000296 | denotes | blood |
| T79 | 414-418 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
| T80 | 414-418 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
| T81 | 450-455 | http://purl.obolibrary.org/obo/UBERON_0003103 | denotes | organ |
| T82 | 623-624 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T83 | 791-796 | http://purl.obolibrary.org/obo/UBERON_0000178 | denotes | blood |
| T84 | 791-796 | http://www.ebi.ac.uk/efo/EFO_0000296 | denotes | blood |
| T85 | 803-808 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | tests |
| T86 | 842-847 | http://www.ebi.ac.uk/efo/EFO_0000296 | denotes | blood |
| T87 | 848-852 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T41 | 366-372 | Chemical | denotes | oxygen | http://purl.obolibrary.org/obo/CHEBI_25805 |
| T42 | 975-982 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T27 | 44-53 | Phenotype | denotes | y cough, | http://purl.obolibrary.org/obo/HP_0031246 |
| T28 | 55-60 | Phenotype | denotes | ver, | http://purl.obolibrary.org/obo/HP_0001945 |
| T29 | 62-73 | Phenotype | denotes | re throat, | http://purl.obolibrary.org/obo/HP_0033050 |
| T30 | 91-107 | Phenotype | denotes | sal congestion, | http://purl.obolibrary.org/obo/HP_0001742 |
| T31 | 121-130 | Phenotype | denotes | dy ache, | http://purl.obolibrary.org/obo/HP_0033047 |
| T32 | 132-140 | Phenotype | denotes | adache, | http://purl.obolibrary.org/obo/HP_0002315 |
| T33 | 189-198 | Phenotype | denotes | chypnea a | http://purl.obolibrary.org/obo/HP_0002789 |
| T34 | 254-273 | Phenotype | denotes | spiratory failure ( | http://purl.obolibrary.org/obo/HP_0002878 |
| T35 | 282-289 | Phenotype | denotes | spnea, | http://purl.obolibrary.org/obo/HP_0002094 |
| T36 | 291-311 | Phenotype | denotes | spiratory distress > | http://purl.obolibrary.org/obo/HP_0002098 |
| T37 | 321-330 | Phenotype | denotes | chypnea a | http://purl.obolibrary.org/obo/HP_0002789 |
| T38 | 335-342 | Phenotype | denotes | poxia), | http://purl.obolibrary.org/obo/HP_0012418 |
| T39 | 345-350 | Phenotype | denotes | ver, | http://purl.obolibrary.org/obo/HP_0001945 |
| T40 | 432-437 | Phenotype | denotes | ock, | http://purl.obolibrary.org/obo/HP_0031273 |
| T41 | 597-602 | Phenotype | denotes | les, | http://purl.obolibrary.org/obo/HP_0030830 |
| T42 | 654-660 | Phenotype | denotes | emor [ | http://purl.obolibrary.org/obo/HP_0001337 |
| T43 | 758-766 | Phenotype | denotes | arrhea [ | http://purl.obolibrary.org/obo/HP_0002014 |
| T44 | 957-991 | Phenotype | denotes | evated C-reactive protein levels [ | http://purl.obolibrary.org/obo/HP_0011227 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T99 | 153-209 | Sentence | denotes | In severe form, the symptoms were tachypnea and dyspnea. |
| T100 | 210-492 | Sentence | denotes | In critical cases, patients complained of respiratory failure (severe dyspnea, respiratory distress >30/min, tachypnea and hypoxia), fever, decreased blood oxygen saturation of less than or equal to 93%, lung filtrates, shock, and multiple organ dysfunctions or even failure [2,14]. |
| T101 | 493-663 | Sentence | denotes | Research also showed that in severe conditions, patients showed signs of weakened breath sound, moist rales, dull percussion, and a decrease in tactile speech tremor [6]. |
| T102 | 664-770 | Sentence | denotes | The disease causes not only respiratory symptoms but also gastrointestinal symptoms such as diarrhea [15]. |
| T103 | 771-935 | Sentence | denotes | Laboratory complete blood count tests may show normal or reduced white blood cell count or reduced lymphocyte count in the early stages of the disease onset [6,15]. |
| T104 | 936-995 | Sentence | denotes | Patients also show elevated C-reactive protein levels [16]. |
TEST0
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32550056-236-242-2286768 | 488-490 | ["32779745"] | denotes | 14 |
| 32550056-167-172-2286769 | 660-661 | ["32029004"] | denotes | 6 |
| 32550056-158-163-2286770 | 929-930 | ["32029004"] | denotes | 6 |
| 32550056-220-226-2286771 | 991-993 | ["32107577"] | denotes | 16 |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32550056-32779745-23854224 | 488-490 | 32779745 | denotes | 14 |
| 32550056-32029004-23854225 | 660-661 | 32029004 | denotes | 6 |
| 32550056-32029004-23854226 | 929-930 | 32029004 | denotes | 6 |
| 32550056-32107577-23854227 | 991-993 | 32107577 | denotes | 16 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 274 | 964-982 | Gene | denotes | C-reactive protein | Gene:1401 |
| 275 | 0-8 | Species | denotes | Patients | Tax:9606 |
| 276 | 229-237 | Species | denotes | patients | Tax:9606 |
| 277 | 541-549 | Species | denotes | patients | Tax:9606 |
| 278 | 936-944 | Species | denotes | Patients | Tax:9606 |
| 279 | 366-372 | Chemical | denotes | oxygen | MESH:D010100 |
| 280 | 42-51 | Disease | denotes | dry cough | MESH:D003371 |
| 281 | 53-58 | Disease | denotes | fever | MESH:D005334 |
| 282 | 60-71 | Disease | denotes | sore throat | MESH:D010608 |
| 283 | 124-128 | Disease | denotes | ache | MESH:D063806 |
| 284 | 130-138 | Disease | denotes | headache | MESH:D006261 |
| 285 | 144-151 | Disease | denotes | fatigue | MESH:D005221 |
| 286 | 187-196 | Disease | denotes | tachypnea | MESH:D059246 |
| 287 | 201-208 | Disease | denotes | dyspnea | MESH:D004417 |
| 288 | 252-271 | Disease | denotes | respiratory failure | MESH:D012131 |
| 289 | 280-287 | Disease | denotes | dyspnea | MESH:D004417 |
| 290 | 289-309 | Disease | denotes | respiratory distress | MESH:D012128 |
| 291 | 319-328 | Disease | denotes | tachypnea | MESH:D059246 |
| 292 | 333-340 | Disease | denotes | hypoxia | MESH:D000860 |
| 293 | 343-348 | Disease | denotes | fever | MESH:D005334 |
| 294 | 430-435 | Disease | denotes | shock | MESH:D012769 |
| 295 | 441-468 | Disease | denotes | multiple organ dysfunctions | MESH:D009102 |
| 296 | 652-658 | Disease | denotes | tremor | MESH:D014202 |
| 297 | 692-712 | Disease | denotes | respiratory symptoms | MESH:D012818 |
| 298 | 722-747 | Disease | denotes | gastrointestinal symptoms | MESH:D012817 |
| 299 | 756-764 | Disease | denotes | diarrhea | MESH:D003967 |