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PMC:7289100 / 45950-47264 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T159 54-66 Body_part denotes glycoprotein http://purl.org/sig/ont/fma/fma62925
T160 81-89 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T161 105-112 Body_part denotes Protein http://purl.org/sig/ont/fma/fma67257
T162 130-139 Body_part denotes ribosomal http://purl.org/sig/ont/fma/fma66867
T163 140-147 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T164 160-173 Body_part denotes Interleukin-7 http://purl.org/sig/ont/fma/fma264828
T165 160-171 Body_part denotes Interleukin http://purl.org/sig/ont/fma/fma86578
T166 204-211 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T167 223-230 Body_part denotes Protein http://purl.org/sig/ont/fma/fma67257
T168 289-296 Body_part denotes Protein http://purl.org/sig/ont/fma/fma67257
T169 332-339 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T170 350-358 Body_part denotes Lysosome http://purl.org/sig/ont/fma/fma63836
T171 379-391 Body_part denotes glycoprotein http://purl.org/sig/ont/fma/fma62925
T172 490-497 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T173 527-533 Body_part denotes finger http://purl.org/sig/ont/fma/fma9666
T174 534-541 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T175 562-569 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T176 604-612 Body_part denotes tyrosine http://purl.org/sig/ont/fma/fma82768
T177 613-620 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T178 727-734 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T179 819-848 Body_part denotes Neural cell adhesion molecule http://purl.org/sig/ont/fma/fma67856
T180 819-830 Body_part denotes Neural cell http://purl.org/sig/ont/fma/fma70333
T181 826-830 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T182 857-864 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T183 899-906 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T184 985-991 Body_part denotes myosin http://purl.org/sig/ont/fma/fma67840
T185 1004-1011 Body_part denotes Thyroid http://purl.org/sig/ont/fma/fma9603
T186 1031-1038 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T187 1062-1068 Body_part denotes myosin http://purl.org/sig/ont/fma/fma67840
T188 1084-1090 Body_part denotes Neuron http://purl.org/sig/ont/fma/fma54527
T189 1111-1118 Body_part denotes Histone http://purl.org/sig/ont/fma/fma74413
T190 1119-1125 Body_part denotes lysine http://purl.org/sig/ont/fma/fma82758
T191 1157-1178 Body_part denotes Transmembrane protein http://purl.org/sig/ont/fma/fma67858
T192 1196-1203 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T57 527-533 Body_part denotes finger http://purl.obolibrary.org/obo/UBERON_0002389
T58 1004-1011 Body_part denotes Thyroid http://purl.obolibrary.org/obo/UBERON_0002046

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T528 37-45 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T529 37-41 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T530 243-254 Disease denotes Hepatitis A http://purl.obolibrary.org/obo/MONDO_0005790
T531 243-252 Disease denotes Hepatitis http://purl.obolibrary.org/obo/MONDO_0002251
T532 699-726 Disease denotes Hermansky-Pudlak syndrome 1 http://purl.obolibrary.org/obo/MONDO_0008748
T533 699-724 Disease denotes Hermansky-Pudlak syndrome http://purl.obolibrary.org/obo/MONDO_0019312
T534 873-876 Disease denotes FH1 http://purl.obolibrary.org/obo/MONDO_0007080
T535 877-880 Disease denotes FH2 http://purl.obolibrary.org/obo/MONDO_0011576
T536 1004-1019 Disease denotes Thyroid adenoma http://purl.obolibrary.org/obo/MONDO_0002454|http://purl.obolibrary.org/obo/MONDO_0005032
T538 1012-1019 Disease denotes adenoma http://purl.obolibrary.org/obo/MONDO_0004972

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T353 75-89 http://purl.obolibrary.org/obo/PR_000029067 denotes human proteins
T354 91-98 http://purl.obolibrary.org/obo/PR_000018263 denotes Peptide
T355 99-112 http://purl.obolibrary.org/obo/PR_000029067 denotes Human Protein
T356 253-254 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T357 255-260 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T358 350-358 http://purl.obolibrary.org/obo/GO_0005764 denotes Lysosome
T359 370-378 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membrane
T360 542-545 http://purl.obolibrary.org/obo/CLO_0001409 denotes 528
T361 554-556 http://purl.obolibrary.org/obo/CLO_0002861 denotes E3
T362 782-791 http://purl.obolibrary.org/obo/CLO_0001658 denotes activator
T363 826-830 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T364 873-876 http://purl.obolibrary.org/obo/CLO_0003096 denotes FH1
T365 949-950 http://purl.obolibrary.org/obo/CLO_0001020 denotes A

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T209 54-66 Chemical denotes glycoprotein http://purl.obolibrary.org/obo/CHEBI_17089
T210 81-89 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T211 91-98 Chemical denotes Peptide http://purl.obolibrary.org/obo/CHEBI_16670
T212 105-112 Chemical denotes Protein http://purl.obolibrary.org/obo/CHEBI_16541
T213 140-147 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T214 204-211 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T215 223-230 Chemical denotes Protein http://purl.obolibrary.org/obo/CHEBI_16541
T216 289-296 Chemical denotes Protein http://purl.obolibrary.org/obo/CHEBI_16541
T217 332-339 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T218 379-391 Chemical denotes glycoprotein http://purl.obolibrary.org/obo/CHEBI_17089
T219 402-416 Chemical denotes Isovaleryl-CoA http://purl.obolibrary.org/obo/CHEBI_15487
T220 413-416 Chemical denotes CoA http://purl.obolibrary.org/obo/CHEBI_15346|http://purl.obolibrary.org/obo/CHEBI_57287
T222 490-497 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T223 534-541 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T224 562-569 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T225 604-612 Chemical denotes tyrosine http://purl.obolibrary.org/obo/CHEBI_18186
T226 613-620 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T227 642-651 Chemical denotes Amiloride http://purl.obolibrary.org/obo/CHEBI_2639
T228 662-668 Chemical denotes sodium http://purl.obolibrary.org/obo/CHEBI_26708
T229 685-690 Chemical denotes alpha http://purl.obolibrary.org/obo/CHEBI_30216
T230 727-734 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T231 840-848 Chemical denotes molecule http://purl.obolibrary.org/obo/CHEBI_25367
T232 857-864 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T233 899-906 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T234 917-920 Chemical denotes ATP http://purl.obolibrary.org/obo/CHEBI_15422|http://purl.obolibrary.org/obo/CHEBI_30616
T236 1004-1011 Chemical denotes Thyroid http://purl.obolibrary.org/obo/CHEBI_9584
T237 1031-1038 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T238 1111-1118 Chemical denotes Histone http://purl.obolibrary.org/obo/CHEBI_15358
T239 1119-1125 Chemical denotes lysine http://purl.obolibrary.org/obo/CHEBI_18019|http://purl.obolibrary.org/obo/CHEBI_25094
T241 1171-1178 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T242 1196-1203 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T223 243-252 Phenotype denotes Hepatitis http://purl.obolibrary.org/obo/HP_0012115
T224 1004-1019 Phenotype denotes Thyroid adenoma http://purl.obolibrary.org/obo/HP_0000854

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T24 795-808 http://purl.obolibrary.org/obo/GO_0009653 denotes morphogenesis
T25 826-848 http://purl.obolibrary.org/obo/GO_0098631 denotes cell adhesion molecule
T26 826-839 http://purl.obolibrary.org/obo/GO_0007155 denotes cell adhesion

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T282 0-90 Sentence denotes Table 1 Heptapeptide sharing between SARS-CoV-2 spike glycoprotein and the human proteins.
T283 91-117 Sentence denotes Peptide Human Protein Name
T284 118-151 Sentence denotes SSTASAL 40S ribosomal protein S13
T285 152-173 Sentence denotes KLNDLCF Interleukin-7
T286 174-214 Sentence denotes FLPFFSN OTU domain-containing protein 6A
T287 215-234 Sentence denotes EIDRLNE Protein SET
T288 235-280 Sentence denotes IGAGICA Hepatitis A virus cellular receptor 2
T289 281-303 Sentence denotes EIDRLNE Protein SETSIP
T290 304-341 Sentence denotes LDKYFKN Follistatin-related protein 1
T291 342-393 Sentence denotes VSGTNGT Lysosome-associated membrane glycoprotein 1
T292 394-445 Sentence denotes FKNLREF Isovaleryl-CoA dehydrogenase, mitochondrial
T293 446-513 Sentence denotes LPPLLTD Maestro heat-like repeat-containing protein family member 9
T294 514-545 Sentence denotes DKVFRSS Zinc finger protein 528
T295 546-582 Sentence denotes LVKQLSS E3 SUMO-protein ligase PIAS1
T296 583-632 Sentence denotes VTLADAG Non-receptor tyrosine-protein kinase TNK1
T297 633-690 Sentence denotes RRARSVAS Amiloride-sensitive sodium channel subunit alpha
T298 691-734 Sentence denotes SPRRARS Hermansky-Pudlak syndrome 1 protein
T299 735-751 Sentence denotes KVEAEVQ EMILIN-3
T300 752-810 Sentence denotes TRFQTLL Disheveled-associated activator of morphogenesis 2
T301 811-864 Sentence denotes VYSTGSN Neural cell adhesion molecule L1-like protein
T302 865-908 Sentence denotes GLTVLPP FH1/FH2 domain-containing protein 3
T303 909-960 Sentence denotes SLLIVNN ATP-binding cassette sub-family A member 10
T304 961-995 Sentence denotes DEDDSEPV Unconventional myosin-XVI
T305 996-1038 Sentence denotes NASVVNI Thyroid adenoma-associated protein
T306 1039-1075 Sentence denotes LIRAAEI Unconventional myosin-XVIIIa
T307 1076-1102 Sentence denotes TGRLQSL Neuron navigator 3
T308 1103-1148 Sentence denotes DEVRQIA Histone-lysine N-methyltransferase 2C
T309 1149-1187 Sentence denotes SSSGWTA Transmembrane protein KIAA1109
T310 1188-1261 Sentence denotes Data on protein function/disease from Uniprot (https://www.uniprot.org/).
T311 1262-1314 Sentence denotes Sequential overlapping heptapeptides are given bold.

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T644 37-47 SP_7 denotes SARS-CoV-2
T645 48-53 PG_18;PG_1 denotes spike
T646 54-66 PG_18;PG_1;CHEBI:17089;BV_11;CHEBI:17089 denotes glycoprotein
T647 75-80 SP_6;NCBITaxon:9606 denotes human
T629 37-47 SP_7 denotes SARS-CoV-2
T630 48-53 PG_18;PG_1 denotes spike
T631 54-66 PG_18;PG_1;CHEBI:17089;CHEBI:17089;BV_11 denotes glycoprotein
T632 75-80 SP_6;NCBITaxon:9606 denotes human
T633 130-139 GO:0005840 denotes ribosomal
T634 186-192 SO:0000417 denotes domain
T635 255-260 NCBITaxon:10239 denotes virus
T636 370-378 GO:0016020 denotes membrane
T637 379-391 CHEBI:17089;CHEBI:17089;BV_11 denotes glycoprotein
T638 413-416 CHEBI:15346;CHEBI:15346 denotes CoA
T639 432-461 GO:0005739 denotes mitochondrial LPPLLTD Maestro
T640 795-808 GO:0009653 denotes morphogenesis
T641 826-830 CL:0000540 denotes cell
T642 840-848 CHEBI:36357;CHEBI:36357 denotes molecule
T643 881-887 SO:0000417 denotes domain

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
1486 289-303 Gene denotes Protein SETSIP Gene:646817
1487 577-582 Gene denotes PIAS1 Gene:8554
1488 873-908 Gene denotes FH1/FH2 domain-containing protein 3 Gene:80206
1489 917-960 Gene denotes ATP-binding cassette sub-family A member 10 Gene:10349
1490 1179-1187 Gene denotes KIAA1109 Gene:84162
1491 99-104 Species denotes Human Tax:9606
1492 243-252 Disease denotes Hepatitis MESH:D056486
1493 1012-1019 Disease denotes adenoma MESH:D000236
1496 37-47 Species denotes SARS-CoV-2 Tax:2697049
1497 75-80 Species denotes human Tax:9606