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PMC:7283670 / 37848-38810 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T90216 175-180 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T57759 263-269 Body_part denotes Throat http://purl.org/sig/ont/fma/fma228738
T72806 843-848 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T67 175-180 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T68 263-269 Body_part denotes Throat http://purl.obolibrary.org/obo/UBERON_0000341
T69 843-848 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T211 519-527 Disease denotes COVID‐19 http://purl.obolibrary.org/obo/MONDO_0100096
T212 925-934 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T349 169-173 http://purl.obolibrary.org/obo/UBERON_0000473 denotes test
T350 175-180 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T351 843-848 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T352 856-857 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T353 906-907 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T82 25-31 Chemical denotes Cohort http://purl.obolibrary.org/obo/CHEBI_34935

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T344 0-313 Sentence denotes Ai et al. (2020), China Cohort/Tangji hospital of Tongji Medical College Huazhong University of Science and Technology, Wuhan, Hubei 1,014/51 ± 15/46% man Laboratory test, chest CT (7 day interval), RT‐PCR (Taq man one step): multiple assays (3 day interval) Throat swab Suspected of nCoV/China Positive CT:
T345 314-347 Sentence denotes 88% (888/1,014), positive RT‐PCR:
T346 348-364 Sentence denotes 59% (601/1,014).
T347 365-408 Sentence denotes Sensitivity of CT based on positive RT‐PCR:
T348 409-438 Sentence denotes 97% (95%CI, 95–98%, 580/601).
T349 439-467 Sentence denotes Negative RT‐PCR/positive CT:
T350 468-482 Sentence denotes 75% (308/413).
T351 483-563 Sentence denotes Initial positive CT consistent with COVID‐19 before the initial positive RT‐PCR:
T352 564-571 Sentence denotes 60–93%.
T353 572-635 Sentence denotes Improvement in follow‐up CT before the RT‐PCR turning negative:
T354 636-657 Sentence denotes 42% (24/57), CT: GGO:
T355 658-688 Sentence denotes 46% [409/888], consolidations:
T356 689-723 Sentence denotes 50% [447/888], bilateral findings:
T357 724-776 Sentence denotes 90% [801/888] Fever, dry cough Initial + to − PCR:
T358 777-792 Sentence denotes 5.1 ± 1.5 days,
T359 793-812 Sentence denotes Initial − to + PCR:
T360 813-962 Sentence denotes 6.9 ± 2.3 days – Diagnosis: chest CT, as a highly sensitive method, could be considered as a primary tool for infection diagnosis in epidemic areas

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T108 739-744 Phenotype denotes Fever http://purl.obolibrary.org/obo/HP_0001945
T109 746-755 Phenotype denotes dry cough http://purl.obolibrary.org/obo/HP_0031246
T110 858-874 Phenotype denotes highly sensitive http://purl.obolibrary.org/obo/HP_0041092

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
1141 289-293 Species denotes nCoV Tax:2697049
1269 519-527 Disease denotes COVID‐19 MESH:C000657245
1270 739-744 Disease denotes Fever MESH:D005334
1271 746-755 Disease denotes dry cough MESH:D003371
1272 925-934 Disease denotes infection MESH:D007239