PMC:7283670 / 111827-113377 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T29 507-512 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T30 676-680 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T31 748-753 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T32 1199-1203 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T33 1399-1404 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T213 507-512 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T214 676-680 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T215 748-753 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T216 1199-1203 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T217 1399-1404 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T577 55-63 Disease denotes COVID‐19 http://purl.obolibrary.org/obo/MONDO_0100096
T578 75-84 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T579 248-263 Disease denotes viral pneumonia http://purl.obolibrary.org/obo/MONDO_0006012
T580 254-263 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T581 336-354 Disease denotes pulmonary diseases http://purl.obolibrary.org/obo/MONDO_0005275
T582 472-480 Disease denotes COVID‐19 http://purl.obolibrary.org/obo/MONDO_0100096
T583 944-953 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T584 1071-1079 Disease denotes COVID‐19 http://purl.obolibrary.org/obo/MONDO_0100096
T585 1477-1486 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T586 1504-1512 Disease denotes COVID‐19 http://purl.obolibrary.org/obo/MONDO_0100096

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T56 3-6 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T57 197-198 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T58 507-512 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T59 676-680 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T60 676-680 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T61 748-753 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T62 772-775 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T63 800-801 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T64 1199-1203 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T65 1199-1203 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T66 1399-1404 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T948 0-174 Sentence denotes CT has proved to be of great value in diagnosis of the COVID‐19‐associated pneumonia, as it provides major evidence, that cannot readily be obtained with alternative methods.
T949 175-441 Sentence denotes It is true that CT is a reliable imaging modality in subtle detection of viral pneumonia and screening of suspected cases; however, it should be noted that many pulmonary diseases of inflammatory nature share similar radiographic findings (Wang, Kang, et al., 2020).
T950 442-569 Sentence denotes The majority of patients with COVID‐19 present with GGO in their chest CT, which later progress into multilobar consolidations.
T951 570-722 Sentence denotes There have been several reports of rounded opacities, which are sometimes peripherally distributed in the lung (Chung et al., 2020; Huang et al., 2020).
T952 723-972 Sentence denotes In contrast to CT, plain chest radiography (CXR) has not been recommended as a first‐line imaging method, because this modality does not provide the clarity viewed on CT scans, especially in the early stages of pulmonary infection (Ng et al., 2020).
T953 973-1177 Sentence denotes Nevertheless, CXR is capable of recording pathologic changes in patients with severely progressed COVID‐19, as the bilateral multifocal consolidations present in these patients are too dense to be missed.
T954 1178-1293 Sentence denotes The notorious “white lung” appearance can be optimally viewed on CXRs of critically ill patients (Zu et al., 2020).
T955 1294-1381 Sentence denotes CT resulted in diagnosis of 14,840 new cases as of February 13, 2020 (Zu et al., 2020).
T956 1382-1550 Sentence denotes Therefore, slice chest CT is an adequately sensitive and reliable method in early detection of pneumonia in patients with COVID‐19 (Chan et al., 2020; Ng et al., 2020).

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T303 75-84 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T304 254-263 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T305 934-953 Phenotype denotes pulmonary infection http://purl.obolibrary.org/obo/HP_0006532
T306 1477-1486 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
2161 458-466 Species denotes patients Tax:9606
2162 1037-1045 Species denotes patients Tax:9606
2163 1141-1149 Species denotes patients Tax:9606
2164 1266-1274 Species denotes patients Tax:9606
2165 1490-1498 Species denotes patients Tax:9606
2166 55-63 Disease denotes COVID‐19 MESH:C000657245
2167 75-84 Disease denotes pneumonia MESH:D011014
2168 248-263 Disease denotes viral pneumonia
2169 336-354 Disease denotes pulmonary diseases MESH:D008171
2170 472-480 Disease denotes COVID‐19 MESH:C000657245
2171 934-953 Disease denotes pulmonary infection MESH:D012141
2172 1071-1079 Disease denotes COVID‐19 MESH:C000657245
2173 1251-1265 Disease denotes critically ill MESH:D016638
2174 1477-1486 Disease denotes pneumonia MESH:D011014
2175 1504-1512 Disease denotes COVID‐19 MESH:C000657245