PMC:7281546 / 30363-31109
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T183 | 156-164 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
| T184 | 174-178 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T185 | 217-224 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T186 | 242-249 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T187 | 322-329 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T188 | 355-363 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
| T189 | 435-437 | Body_part | denotes | A1 | http://purl.org/sig/ont/fma/fma66592 |
| T190 | 453-462 | Body_part | denotes | chemokine | http://purl.org/sig/ont/fma/fma241981 |
| T191 | 489-494 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T192 | 519-527 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
| T193 | 582-588 | Body_part | denotes | genome | http://purl.org/sig/ont/fma/fma84116 |
| T194 | 624-632 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
| T195 | 657-665 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T66 | 194-209 | Disease | denotes | viral infection | http://purl.obolibrary.org/obo/MONDO_0005108 |
| T67 | 200-209 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T266 | 174-178 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T267 | 228-229 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T268 | 262-267 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T269 | 489-494 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T270 | 496-497 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T271 | 571-576 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T272 | 714-719 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T264 | 156-164 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T265 | 217-224 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T266 | 242-249 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T267 | 322-329 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T268 | 355-363 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T269 | 519-527 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T270 | 624-632 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T271 | 657-665 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T186 | 194-209 | http://purl.obolibrary.org/obo/GO_0016032 | denotes | viral infection |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T214 | 0-210 | Sentence | denotes | Although several studies have been performed to understand the pathogenicity of PEDV, there remains limited information about the interaction between viral proteins and host cell factors during viral infection. |
| T215 | 211-280 | Sentence | denotes | CoV N protein is a vital viral protein involved in virus replication. |
| T216 | 281-476 | Sentence | denotes | Current researches have indicated that N protein interacts with many host proteins, such as hCypA [172], proteasome subunit p42 [173], Smad3 [174], hnRNP-A1 [175], and the chemokine CXCL16 [176]. |
| T217 | 477-553 | Sentence | denotes | In the host cells, a large number of host proteins reveal various functions. |
| T218 | 554-633 | Sentence | denotes | However, for the virus, the genome only encodes several limited viral proteins. |
| T219 | 634-746 | Sentence | denotes | Therefore, these viral proteins have to be multifunctional, which is pivotal to virus replication and existence. |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32403318-15358143-82827407 | 380-383 | 15358143 | denotes | 172 |
| 32403318-20478047-82827408 | 410-413 | 20478047 | denotes | 173 |
| 32403318-18055455-82827409 | 423-426 | 18055455 | denotes | 174 |
| 32403318-10603321-82827410 | 439-442 | 10603321 | denotes | 175 |
| 32403318-20960183-82827411 | 471-474 | 20960183 | denotes | 176 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 946 | 373-378 | Gene | denotes | hCypA | Gene:5478 |
| 947 | 386-408 | Gene | denotes | proteasome subunit p42 | Gene:5706 |
| 948 | 416-421 | Gene | denotes | Smad3 | Gene:4088 |
| 949 | 429-437 | Gene | denotes | hnRNP-A1 | Gene:3178 |
| 950 | 463-469 | Gene | denotes | CXCL16 | Gene:58191 |
| 951 | 80-84 | Species | denotes | PEDV | Tax:28295 |
| 952 | 211-214 | Species | denotes | CoV | Tax:11118 |
| 953 | 194-209 | Disease | denotes | viral infection | MESH:D001102 |