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PMC:7279430 / 27442-27953 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T79 348-358 Body_part denotes amino acid http://purl.org/sig/ont/fma/fma82739
T80 419-429 Body_part denotes amino acid http://purl.org/sig/ont/fma/fma82739

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
1587 72-82 Species denotes SARS-CoV-2 Tax:2697049
1588 30-44 Chemical denotes (E,E)-farnesol
1589 49-62 Chemical denotes (E)-nerolidol
1590 149-163 Chemical denotes (E,E)-farnesol
1591 178-191 Chemical denotes (E)-nerolidol
1592 244-258 Chemical denotes (E,E)-farnesol
1593 260-267 Chemical denotes magenta MESH:D012394
1594 273-286 Chemical denotes (E)-nerolidol
1595 373-387 Chemical denotes (E,E)-farnesol
1596 444-457 Chemical denotes (E)-nerolidol
1597 459-467 Chemical denotes Hydrogen MESH:D006859

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T160 72-80 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T217 111-112 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T218 203-204 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T219 348-367 http://purl.obolibrary.org/obo/CHEBI_33708 denotes amino acid residues
T220 348-367 http://purl.obolibrary.org/obo/PR_000036907 denotes amino acid residues
T221 419-438 http://purl.obolibrary.org/obo/CHEBI_33708 denotes amino acid residues
T222 419-438 http://purl.obolibrary.org/obo/PR_000036907 denotes amino acid residues

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T421 30-44 Chemical denotes (E,E)-farnesol http://purl.obolibrary.org/obo/CHEBI_16619
T422 36-44 Chemical denotes farnesol http://purl.obolibrary.org/obo/CHEBI_28600
T423 53-62 Chemical denotes nerolidol http://purl.obolibrary.org/obo/CHEBI_7524
T424 149-163 Chemical denotes (E,E)-farnesol http://purl.obolibrary.org/obo/CHEBI_16619
T425 155-163 Chemical denotes farnesol http://purl.obolibrary.org/obo/CHEBI_28600
T426 165-172 Chemical denotes magenta http://purl.obolibrary.org/obo/CHEBI_87661
T427 182-191 Chemical denotes nerolidol http://purl.obolibrary.org/obo/CHEBI_7524
T428 244-258 Chemical denotes (E,E)-farnesol http://purl.obolibrary.org/obo/CHEBI_16619
T429 250-258 Chemical denotes farnesol http://purl.obolibrary.org/obo/CHEBI_28600
T430 260-267 Chemical denotes magenta http://purl.obolibrary.org/obo/CHEBI_87661
T431 277-286 Chemical denotes nerolidol http://purl.obolibrary.org/obo/CHEBI_7524
T432 348-358 Chemical denotes amino acid http://purl.obolibrary.org/obo/CHEBI_33709
T433 348-353 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T434 354-358 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T435 373-387 Chemical denotes (E,E)-farnesol http://purl.obolibrary.org/obo/CHEBI_16619
T436 379-387 Chemical denotes farnesol http://purl.obolibrary.org/obo/CHEBI_28600
T437 419-429 Chemical denotes amino acid http://purl.obolibrary.org/obo/CHEBI_33709
T438 419-424 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T439 425-429 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T440 448-457 Chemical denotes nerolidol http://purl.obolibrary.org/obo/CHEBI_7524
T441 459-467 Chemical denotes Hydrogen http://purl.obolibrary.org/obo/CHEBI_18276

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T225 103-458 Sentence denotes 6Y84). (A) Ribbon structure of the enzyme and (E,E)-farnesol (magenta) and (E)-nerolidol (orange). (B) Solid structure of the enzyme showing (E,E)-farnesol (magenta) and (E)-nerolidol (orange) in the binding cleft. (C) Important interactions of amino acid residues with (E,E)-farnesol. (D) Important interactions of amino acid residues with (E)-nerolidol.
T226 459-511 Sentence denotes Hydrogen bonds are indicated with blue dashed lines.