PMC:7279430 / 27024-27431
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T78 | 265-275 | Body_part | denotes | Amino acid | http://purl.org/sig/ont/fma/fma82739 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 1569 | 63-67 | Species | denotes | E)-α | Tax:114629 |
| 1570 | 87-97 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 1571 | 365-369 | Species | denotes | E)-α | Tax:114629 |
| 1572 | 40-55 | Chemical | denotes | (E)-β-farnesene | |
| 1573 | 164-179 | Chemical | denotes | (E)-β-farnesene | |
| 1574 | 223-238 | Chemical | denotes | (E)-β-farnesene | |
| 1575 | 316-327 | Chemical | denotes | β-farnesene | MESH:C062671 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T159 | 87-95 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T213 | 126-127 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T214 | 182-183 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | B |
| T215 | 265-284 | http://purl.obolibrary.org/obo/CHEBI_33708 | denotes | Amino acid residues |
| T216 | 265-284 | http://purl.obolibrary.org/obo/PR_000036907 | denotes | Amino acid residues |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T413 | 46-55 | Chemical | denotes | farnesene | http://purl.obolibrary.org/obo/CHEBI_39237 |
| T414 | 68-77 | Chemical | denotes | farnesene | http://purl.obolibrary.org/obo/CHEBI_39237 |
| T415 | 170-179 | Chemical | denotes | farnesene | http://purl.obolibrary.org/obo/CHEBI_39237 |
| T416 | 229-238 | Chemical | denotes | farnesene | http://purl.obolibrary.org/obo/CHEBI_39237 |
| T417 | 265-275 | Chemical | denotes | Amino acid | http://purl.obolibrary.org/obo/CHEBI_33704 |
| T418 | 271-275 | Chemical | denotes | acid | http://purl.obolibrary.org/obo/CHEBI_37527 |
| T419 | 318-327 | Chemical | denotes | farnesene | http://purl.obolibrary.org/obo/CHEBI_39237 |
| T420 | 370-379 | Chemical | denotes | farnesene | http://purl.obolibrary.org/obo/CHEBI_39237 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T222 | 0-117 | Sentence | denotes | Figure 1 Lowest-energy docked poses of (E)-β-farnesene and (E,E)-α-farnesene with the SARS-CoV-2 main protease (PDB: |
| T223 | 118-407 | Sentence | denotes | 6LU7). (A) Ribbon structure of the enzyme and (E)-β-farnesene. (B) Solid structure of the enzyme showing (E)-β-farnesene in the binding cleft. (C) Amino acid residues in proximity to the docked (E)-β-farnesene. (D) Lowest-energy docked pose of (E,E)-α-farnesene in the enzyme binding site. |