PMC:7279430 / 18489-19046 JSONTXT

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T38","span":{"begin":78,"end":86},"obj":"Body_part"},{"id":"T39","span":{"begin":154,"end":162},"obj":"Body_part"},{"id":"T40","span":{"begin":187,"end":194},"obj":"Body_part"},{"id":"T41","span":{"begin":401,"end":403},"obj":"Body_part"},{"id":"T42","span":{"begin":522,"end":530},"obj":"Body_part"}],"attributes":[{"id":"A38","pred":"fma_id","subj":"T38","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A39","pred":"fma_id","subj":"T39","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A40","pred":"fma_id","subj":"T40","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A41","pred":"fma_id","subj":"T41","obj":"http://purl.org/sig/ont/fma/fma66595"},{"id":"A42","pred":"fma_id","subj":"T42","obj":"http://purl.org/sig/ont/fma/fma67257"}],"text":"In order to compare docking scores of the essential oil components with other proteins, docking was also carried out with six randomly selected non-virus proteins: Bovine odorant binding protein (BtOBP, PDB: 1GT3), cruzain (PDB: 1ME3), torpedo acetylcholinesterase (TcAChE, PDB: 6G1U), Bacillus anthracis nicotinate mononucleotide adenylytransferase (BaNadD, PDB: 3HFJ), Russell’s viper phospholipase A2 (DrPLA2, PDB: 1FV0), and Escherichia coli l-aspartate aminotransferase (EcAspTA, PDB: 2Q7W). Docking scores for these proteins are summarized in Table 4."}

{"project":"LitCovid-PubTator","denotations":[{"id":"789","span":{"begin":286,"end":304},"obj":"Species"},{"id":"790","span":{"begin":371,"end":386},"obj":"Species"},{"id":"791","span":{"begin":42,"end":55},"obj":"Chemical"}],"attributes":[{"id":"A789","pred":"tao:has_database_id","subj":"789","obj":"Tax:1392"},{"id":"A790","pred":"tao:has_database_id","subj":"790","obj":"Tax:8707"},{"id":"A791","pred":"tao:has_database_id","subj":"791","obj":"MESH:D009822"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"In order to compare docking scores of the essential oil components with other proteins, docking was also carried out with six randomly selected non-virus proteins: Bovine odorant binding protein (BtOBP, PDB: 1GT3), cruzain (PDB: 1ME3), torpedo acetylcholinesterase (TcAChE, PDB: 6G1U), Bacillus anthracis nicotinate mononucleotide adenylytransferase (BaNadD, PDB: 3HFJ), Russell’s viper phospholipase A2 (DrPLA2, PDB: 1FV0), and Escherichia coli l-aspartate aminotransferase (EcAspTA, PDB: 2Q7W). Docking scores for these proteins are summarized in Table 4."}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T136","span":{"begin":148,"end":153},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10239"},{"id":"T137","span":{"begin":401,"end":403},"obj":"http://purl.obolibrary.org/obo/CLO_0001562"}],"text":"In order to compare docking scores of the essential oil components with other proteins, docking was also carried out with six randomly selected non-virus proteins: Bovine odorant binding protein (BtOBP, PDB: 1GT3), cruzain (PDB: 1ME3), torpedo acetylcholinesterase (TcAChE, PDB: 6G1U), Bacillus anthracis nicotinate mononucleotide adenylytransferase (BaNadD, PDB: 3HFJ), Russell’s viper phospholipase A2 (DrPLA2, PDB: 1FV0), and Escherichia coli l-aspartate aminotransferase (EcAspTA, PDB: 2Q7W). Docking scores for these proteins are summarized in Table 4."}

{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T285","span":{"begin":42,"end":66},"obj":"Chemical"},{"id":"T286","span":{"begin":42,"end":55},"obj":"Chemical"},{"id":"T287","span":{"begin":78,"end":86},"obj":"Chemical"},{"id":"T288","span":{"begin":154,"end":162},"obj":"Chemical"},{"id":"T289","span":{"begin":187,"end":194},"obj":"Chemical"},{"id":"T290","span":{"begin":305,"end":315},"obj":"Chemical"},{"id":"T291","span":{"begin":316,"end":330},"obj":"Chemical"},{"id":"T292","span":{"begin":448,"end":457},"obj":"Chemical"},{"id":"T295","span":{"begin":522,"end":530},"obj":"Chemical"}],"attributes":[{"id":"A285","pred":"chebi_id","subj":"T285","obj":"http://purl.obolibrary.org/obo/CHEBI_27311"},{"id":"A286","pred":"chebi_id","subj":"T286","obj":"http://purl.obolibrary.org/obo/CHEBI_83630"},{"id":"A287","pred":"chebi_id","subj":"T287","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A288","pred":"chebi_id","subj":"T288","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A289","pred":"chebi_id","subj":"T289","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A290","pred":"chebi_id","subj":"T290","obj":"http://purl.obolibrary.org/obo/CHEBI_32544"},{"id":"A291","pred":"chebi_id","subj":"T291","obj":"http://purl.obolibrary.org/obo/CHEBI_29075"},{"id":"A292","pred":"chebi_id","subj":"T292","obj":"http://purl.obolibrary.org/obo/CHEBI_132943"},{"id":"A293","pred":"chebi_id","subj":"T292","obj":"http://purl.obolibrary.org/obo/CHEBI_29995"},{"id":"A294","pred":"chebi_id","subj":"T292","obj":"http://purl.obolibrary.org/obo/CHEBI_72314"},{"id":"A295","pred":"chebi_id","subj":"T295","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"}],"text":"In order to compare docking scores of the essential oil components with other proteins, docking was also carried out with six randomly selected non-virus proteins: Bovine odorant binding protein (BtOBP, PDB: 1GT3), cruzain (PDB: 1ME3), torpedo acetylcholinesterase (TcAChE, PDB: 6G1U), Bacillus anthracis nicotinate mononucleotide adenylytransferase (BaNadD, PDB: 3HFJ), Russell’s viper phospholipase A2 (DrPLA2, PDB: 1FV0), and Escherichia coli l-aspartate aminotransferase (EcAspTA, PDB: 2Q7W). Docking scores for these proteins are summarized in Table 4."}

{"project":"LitCovid-sentences","denotations":[{"id":"T118","span":{"begin":0,"end":163},"obj":"Sentence"},{"id":"T119","span":{"begin":164,"end":207},"obj":"Sentence"},{"id":"T120","span":{"begin":208,"end":228},"obj":"Sentence"},{"id":"T121","span":{"begin":229,"end":278},"obj":"Sentence"},{"id":"T122","span":{"begin":279,"end":363},"obj":"Sentence"},{"id":"T123","span":{"begin":364,"end":417},"obj":"Sentence"},{"id":"T124","span":{"begin":418,"end":489},"obj":"Sentence"},{"id":"T125","span":{"begin":490,"end":496},"obj":"Sentence"},{"id":"T126","span":{"begin":497,"end":557},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"In order to compare docking scores of the essential oil components with other proteins, docking was also carried out with six randomly selected non-virus proteins: Bovine odorant binding protein (BtOBP, PDB: 1GT3), cruzain (PDB: 1ME3), torpedo acetylcholinesterase (TcAChE, PDB: 6G1U), Bacillus anthracis nicotinate mononucleotide adenylytransferase (BaNadD, PDB: 3HFJ), Russell’s viper phospholipase A2 (DrPLA2, PDB: 1FV0), and Escherichia coli l-aspartate aminotransferase (EcAspTA, PDB: 2Q7W). Docking scores for these proteins are summarized in Table 4."}