PMC:7278709 / 64401-64986 JSONTXT

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/7278709","sourcedb":"PMC","sourceid":"7278709","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7278709","text":" Smoothed Motif Score. Smooth the implied plot of scores to model a directional information effect characteristic of secondary structure prediction [20] by repeating step (2) with the resulting scores, but do not add the basic motif score for each residue i to itself. More specifically stated, examine the above basic motif score for each ith residue from i = 1 to end of sequence in turn, and add it to the score of the residue at i-8, i-7, etc up to i-1, and to the score of the residue i+1, i+2, etc. up to i+8 (providing that the residue numbers i-8 etc. lie within the sequence).","tracks":[{"project":"LitCovid-PMC-OGER-BB","denotations":[{"id":"T1117","span":{"begin":119,"end":126},"obj":"GO:0008541"}],"attributes":[{"subj":"T1117","pred":"source","obj":"LitCovid-PMC-OGER-BB"}]},{"project":"LitCovid-PD-CLO","denotations":[{"id":"T592","span":{"begin":66,"end":67},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"}],"attributes":[{"subj":"T592","pred":"source","obj":"LitCovid-PD-CLO"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T380","span":{"begin":23,"end":268},"obj":"Sentence"},{"id":"T381","span":{"begin":269,"end":585},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T380","pred":"source","obj":"LitCovid-sentences"},{"subj":"T381","pred":"source","obj":"LitCovid-sentences"}]},{"project":"2_test","denotations":[{"id":"32658736-8743705-23109496","span":{"begin":149,"end":151},"obj":"8743705"}],"attributes":[{"subj":"32658736-8743705-23109496","pred":"source","obj":"2_test"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PMC-OGER-BB","color":"#939eec","default":true},{"id":"LitCovid-PD-CLO","color":"#b8ec93"},{"id":"LitCovid-sentences","color":"#ec93d3"},{"id":"2_test","color":"#93eceb"}]}]}}