PMC:7278327 / 8309-10442
Annnotations
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T65 | 200-208 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
T66 | 240-247 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
T67 | 578-581 | Body_part | denotes | CNS | http://purl.org/sig/ont/fma/fma55675 |
T68 | 955-959 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
T69 | 1655-1662 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
T70 | 1715-1722 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
T71 | 1884-1894 | Body_part | denotes | amino acid | http://purl.org/sig/ont/fma/fma82739 |
T72 | 2072-2084 | Body_part | denotes | glycoprotein | http://purl.org/sig/ont/fma/fma62925 |
T73 | 2120-2127 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
289 | 234-239 | Gene | denotes | spike | Gene:43740568 |
290 | 981-986 | Gene | denotes | nAChR | Gene:1137 |
291 | 1959-1964 | Gene | denotes | nAChR | Gene:1137 |
292 | 2114-2119 | Gene | denotes | spike | Gene:43740568 |
293 | 1709-1714 | Gene | denotes | spike | Gene:43740568 |
294 | 223-233 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
295 | 556-566 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
296 | 662-667 | Species | denotes | human | Tax:9606 |
297 | 767-772 | Species | denotes | human | Tax:9606 |
298 | 904-914 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
299 | 940-945 | Species | denotes | human | Tax:9606 |
300 | 1077-1082 | Species | denotes | human | Tax:9606 |
301 | 1179-1187 | Species | denotes | SARS-CoV | Tax:694009 |
302 | 1193-1223 | Species | denotes | canine respiratory coronavirus | Tax:215681 |
303 | 1271-1277 | Species | denotes | canine | Tax:9615 |
304 | 1390-1394 | Species | denotes | dogs | Tax:9615 |
305 | 1645-1654 | Species | denotes | mammalian | Tax:9606 |
306 | 1698-1708 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
307 | 2103-2113 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
308 | 149-153 | Species | denotes | RABV | Tax:11292 |
309 | 718-722 | Species | denotes | RABV | Tax:11292 |
310 | 789-793 | Species | denotes | RABV | Tax:11292 |
311 | 1225-1230 | Species | denotes | CRCoV | Tax:215681 |
312 | 1410-1415 | Species | denotes | CRCoV | Tax:215681 |
313 | 1475-1479 | Species | denotes | RABV | Tax:11292 |
314 | 2060-2064 | Species | denotes | RABV | Tax:11292 |
315 | 1553-1558 | Gene | denotes | nAChR | Gene:1137 |
316 | 348-356 | Disease | denotes | COVID 19 | MESH:C000657245 |
317 | 1289-1308 | Disease | denotes | respiratory disease | MESH:D012140 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T68 | 223-231 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T69 | 348-356 | Disease | denotes | COVID 19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T70 | 556-564 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T71 | 668-674 | Disease | denotes | rabies | http://purl.obolibrary.org/obo/MONDO_0019173 |
T72 | 904-912 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T73 | 1168-1178 | Disease | denotes | infectious | http://purl.obolibrary.org/obo/MONDO_0005550 |
T74 | 1179-1187 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T75 | 1278-1288 | Disease | denotes | infectious | http://purl.obolibrary.org/obo/MONDO_0005550 |
T76 | 1289-1308 | Disease | denotes | respiratory disease | http://purl.obolibrary.org/obo/MONDO_0005087 |
T77 | 1698-1706 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T78 | 2103-2111 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T105 | 24-27 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
T106 | 38-39 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T107 | 56-57 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T108 | 125-126 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T109 | 270-271 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T110 | 578-581 | http://www.ebi.ac.uk/efo/EFO_0000302 | denotes | CNS |
T111 | 578-581 | http://www.ebi.ac.uk/efo/EFO_0000908 | denotes | CNS |
T112 | 662-667 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | human |
T113 | 757-763 | http://purl.obolibrary.org/obo/NCBITaxon_33208 | denotes | animal |
T114 | 767-772 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | human |
T115 | 940-945 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | human |
T116 | 955-965 | http://purl.obolibrary.org/obo/CLO_0000031 | denotes | cell lines |
T117 | 1077-1082 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | human |
T118 | 1159-1160 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T119 | 1240-1241 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T120 | 1318-1320 | http://purl.obolibrary.org/obo/CLO_0001313 | denotes | 36 |
T121 | 1423-1424 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T33 | 200-208 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
T34 | 240-247 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
T35 | 1655-1662 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
T36 | 1715-1722 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
T37 | 1884-1894 | Chemical | denotes | amino acid | http://purl.obolibrary.org/obo/CHEBI_33709 |
T38 | 1884-1889 | Chemical | denotes | amino | http://purl.obolibrary.org/obo/CHEBI_46882 |
T39 | 1890-1894 | Chemical | denotes | acid | http://purl.obolibrary.org/obo/CHEBI_37527 |
T40 | 2072-2084 | Chemical | denotes | glycoprotein | http://purl.obolibrary.org/obo/CHEBI_17089 |
T41 | 2120-2127 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
LitCovid-PD-GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T32 | 981-986 | http://purl.obolibrary.org/obo/GO_0022848 | denotes | nAChR |
T33 | 1553-1558 | http://purl.obolibrary.org/obo/GO_0022848 | denotes | nAChR |
T34 | 1959-1964 | http://purl.obolibrary.org/obo/GO_0022848 | denotes | nAChR |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T41 | 0-357 | Sentence | denotes | Our critical discussion has presented a hypothesis with a potentially high degree of biomedical feasibility, indicating that a novel non-replicating RABV vaccine engineered to contain chimeric capsid proteins with discrete SARS-CoV-2 spike protein domains may represent a highly efficacious preventive measure against neurological comorbidities of COVID 19. |
T42 | 358-443 | Sentence | denotes | This hypothesis is based on critical evaluation of the current biomedical literature. |
T43 | 444-588 | Sentence | denotes | Currently, however, there are no vaccines in development that are designed to specifically target or neutralize SARS-CoV-2 entry into CNS areas. |
T44 | 589-794 | Sentence | denotes | The accepted standard of clinical care employs passive immunization with human rabies immune globulin (HRIG) in conjunction with RABV vaccine administration to prevent animal-to-human transmission of RABV. |
T45 | 795-1099 | Sentence | denotes | Positive results obtained from in vitro studies designed to evaluate potential inhibitory effects of HRIG on SARS-CoV-2 entry and replication in human neuronal cell lines expressing the nAChR may provide putative proof of principle of our testable hypothesis and justify subsequent human clinical trials. |
T46 | 1100-1322 | Sentence | denotes | Recent studies in the veterinary literature have described a highly infectious SARS-CoV-like canine respiratory coronavirus (CRCoV) that is a major causative agent in the canine infectious respiratory disease complex [36]. |
T47 | 1323-1575 | Sentence | denotes | We speculate that the absence of observed neurological sequelae in dogs afflicted with CRCoV may be a functional consequence of widespread prophylactic RABV vaccination that potentially engenders cross-reacting IgGs against viral nAChR-binding domains. |
T48 | 1576-1845 | Sentence | denotes | Finally, conformational matching and stereo-selective recognition of mammalian protein domains by discrete regions of the SARS-CoV-2 spike protein may have been acquired via evolutionary selection of randomly obtained genomic sequences by multiple recombination events. |
T49 | 1846-2133 | Sentence | denotes | Evolutionary conservation of multiple amino acid domains within the primary sequences of variant subtypes of the nAChR, which appears to be evolutionarily ancient, may underlie the observed functional targeting by RABV capsid glycoprotein and putatively by SARS-CoV-2 spike protein [37]. |