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PMC:7275193 / 888-1833 JSONTXT

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LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T12 0-11 NCBITaxon:11118 denotes Coronavirus
T13 37-42 NCBITaxon:10239 denotes viral
T14 80-91 UBERON:0001004 denotes respiratory
T15 137-148 NCBITaxon:11118 denotes coronavirus
T16 159-171 SP_7 denotes severe acute
T17 172-183 SP_7;UBERON:0001004 denotes respiratory
T18 184-206 SP_7 denotes syndrome coronavirus 2
T19 208-212 PR:000014459;SP_7 denotes SARS
T20 212-218 SP_7 denotes -CoV-2
T21 241-250 SP_7 denotes 2019-nCoV
T22 476-481 GO:0016265 denotes death
T23 622-636 UBERON:0004535 denotes cardiovascular
T24 646-661 UBERON:0002037 denotes cerebrovascular
T25 691-700 UBERON:0002048 denotes pulmonary
T26 721-727 UBERON:0002113 denotes kidney
T40139 0-11 NCBITaxon:11118 denotes Coronavirus
T11827 37-42 NCBITaxon:10239 denotes viral
T97256 80-91 UBERON:0001004 denotes respiratory
T93166 137-148 NCBITaxon:11118 denotes coronavirus
T58594 159-171 SP_7 denotes severe acute
T35632 172-183 SP_7;UBERON:0001004 denotes respiratory
T83999 184-206 SP_7 denotes syndrome coronavirus 2
T70732 208-212 PR:000014459;SP_7 denotes SARS
T70251 212-218 SP_7 denotes -CoV-2
T3236 241-250 SP_7 denotes 2019-nCoV
T76263 476-481 GO:0016265 denotes death
T30120 622-636 UBERON:0004535 denotes cardiovascular
T5907 646-661 UBERON:0002037 denotes cerebrovascular
T61041 691-700 UBERON:0002048 denotes pulmonary
T74877 721-727 UBERON:0002113 denotes kidney

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T1 721-727 Body_part denotes kidney http://purl.org/sig/ont/fma/fma7203

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 721-727 Body_part denotes kidney http://purl.obolibrary.org/obo/UBERON_0002113

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T7 598-610 Phenotype denotes hypertension http://purl.obolibrary.org/obo/HP_0000822
T8 622-644 Phenotype denotes cardiovascular disease http://purl.obolibrary.org/obo/HP_0001626
T9 671-708 Phenotype denotes chronic obstructive pulmonary disease http://purl.obolibrary.org/obo/HP_0006510
T10 713-735 Phenotype denotes chronic kidney disease http://purl.obolibrary.org/obo/HP_0012622
T11 807-813 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664
T12 866-872 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664
T13 891-914 Phenotype denotes hematological neoplasms http://purl.obolibrary.org/obo/HP_0004377

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T17 159-206 Disease denotes severe acute respiratory syndrome coronavirus 2 http://purl.obolibrary.org/obo/MONDO_0100096
T18 159-192 Disease denotes severe acute respiratory syndrome http://purl.obolibrary.org/obo/MONDO_0005091
T19 208-216 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T20 598-610 Disease denotes hypertension http://purl.obolibrary.org/obo/MONDO_0005044
T21 612-620 Disease denotes diabetes http://purl.obolibrary.org/obo/MONDO_0005015
T22 622-644 Disease denotes cardiovascular disease http://purl.obolibrary.org/obo/MONDO_0004995
T23 646-669 Disease denotes cerebrovascular disease http://purl.obolibrary.org/obo/MONDO_0011057
T24 671-708 Disease denotes chronic obstructive pulmonary disease http://purl.obolibrary.org/obo/MONDO_0005002
T25 691-708 Disease denotes pulmonary disease http://purl.obolibrary.org/obo/MONDO_0005275
T26 713-735 Disease denotes chronic kidney disease http://purl.obolibrary.org/obo/MONDO_0005300
T27 721-735 Disease denotes kidney disease http://purl.obolibrary.org/obo/MONDO_0001343|http://purl.obolibrary.org/obo/MONDO_0005240
T29 807-813 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T30 866-872 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T31 891-914 Disease denotes hematological neoplasms http://purl.obolibrary.org/obo/MONDO_0044881

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T10 26-27 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T11 118-119 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T12 305-306 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T13 376-388 http://purl.obolibrary.org/obo/OBI_0000245 denotes Organization
T14 401-402 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T15 721-727 http://purl.obolibrary.org/obo/UBERON_0002113 denotes kidney
T16 721-727 http://www.ebi.ac.uk/efo/EFO_0000927 denotes kidney
T17 721-727 http://www.ebi.ac.uk/efo/EFO_0000929 denotes kidney
T18 939-943 http://purl.obolibrary.org/obo/CLO_0053799 denotes 4, 5

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T9 0-255 Sentence denotes Coronavirus disease-19 is a pandemic viral illness that typically presents with respiratory symptoms and is caused by a newly discovered coronavirus, known as severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), previously known as 2019-nCoV [1].
T10 256-343 Sentence denotes In December 2019, the outbreak started in Wuhan, a city in China, then spread globally.
T11 344-416 Sentence denotes In March 2020, the World Health Organization declared it a pandemic [2].
T12 417-496 Sentence denotes The disease severity extends from mild to severe, and even death in some cases.
T13 497-740 Sentence denotes The severity and complications are more in patients with risk factors or other comorbidities such as hypertension, diabetes, cardiovascular disease, cerebrovascular disease, chronic obstructive pulmonary disease, or chronic kidney disease [3].
T14 741-945 Sentence denotes Although some studies showed that the risk of complications among cancer patients is increased, the impact of the disease on cancer patients or other hematological neoplasms is still controversial [4, 5].

TEST0

Id Subject Object Predicate Lexical cue
32547383-198-203-2084723 939-940 ["32066541"] denotes 4
32547383-201-206-2084724 942-943 ["32142622"] denotes 5

2_test

Id Subject Object Predicate Lexical cue
32547383-32066541-18888156 939-940 32066541 denotes 4
32547383-32142622-18888157 942-943 32142622 denotes 5

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
50 137-148 Species denotes coronavirus Tax:11118
51 159-206 Species denotes severe acute respiratory syndrome coronavirus 2 Tax:2697049
52 208-218 Species denotes SARS-CoV-2 Tax:2697049
53 241-250 Species denotes 2019-nCoV Tax:2697049
54 540-548 Species denotes patients Tax:9606
55 814-822 Species denotes patients Tax:9606
56 873-881 Species denotes patients Tax:9606
57 0-22 Disease denotes Coronavirus disease-19 MESH:C000657245
58 37-50 Disease denotes viral illness
59 80-100 Disease denotes respiratory symptoms MESH:D012818
60 476-481 Disease denotes death MESH:D003643
61 598-610 Disease denotes hypertension MESH:D006973
62 612-620 Disease denotes diabetes MESH:D003920
63 622-644 Disease denotes cardiovascular disease MESH:D002318
64 646-669 Disease denotes cerebrovascular disease MESH:D002561
65 671-708 Disease denotes chronic obstructive pulmonary disease MESH:D029424
66 713-735 Disease denotes chronic kidney disease MESH:D051436
67 807-813 Disease denotes cancer MESH:D009369
68 866-872 Disease denotes cancer MESH:D009369
69 891-914 Disease denotes hematological neoplasms MESH:D019337